Guide to the Human Genome
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Name: ZNF154 Sequence: fasta or formatted (437aa) NCBI GI: 145977222
Description:

zinc finger protein 154

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         15           3
 C cysteine            5.7         25           1
 D aspartate           1.8          8           1
 E glutamate           8.2         36           2
 F phenylalanine       4.6         20           2
 G glycine             7.8         34           2
 H histidine           8.2         36           2
 I isoleucine          2.1          9           1
 K lysine              6.9         30           1
 L leucine             6.9         30           2
 M methionine          0.5          2           1
 N asparagine          2.3         10           1
 P proline             2.7         12           1
 Q glutamine           4.8         21           3
 R arginine            7.8         34           2
 S serine             11.9         52           3
 T threonine           6.2         27           2
 V valine              4.3         19           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 154 
ZNF256                0.604   zinc finger protein 256 
ZNF419                0.563   zinc finger protein 419 isoform 7 
ZNF419                0.558   zinc finger protein 419 isoform 6 
ZNF419                0.552   zinc finger protein 419 isoform 5 
ZNF211                0.536   zinc finger protein 211 isoform 2 
ZNF211                0.536   zinc finger protein 211 isoform 1 
ZNF418                0.531   zinc finger protein 418 
ZNF419                0.513   zinc finger protein 419 isoform 4 
ZNF419                0.507   zinc finger protein 419 isoform 3 
ZNF586                0.503   zinc finger protein 586 
ZNF419                0.503   zinc finger protein 419 isoform 2 
ZNF419                0.502   zinc finger protein 419 isoform 1 
ZNF551                0.499   zinc finger protein 551 
ZNF776                0.498   zinc finger protein 776 
ZNF814                0.491   zinc finger protein 814 
LOC100293516          0.488   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.487   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.487   PREDICTED: hypothetical protein XP_002343703 
ZNF587                0.482   zinc finger protein 587 
ZNF417                0.480   zinc finger protein 417 
ZNF416                0.476   zinc finger protein 416 
ZNF792                0.474   zinc finger protein 792 
ZNF436                0.473   zinc finger protein 436 
ZNF436                0.473   zinc finger protein 436 
ZNF17                 0.471   zinc finger protein 17 
ZNF135                0.470   zinc finger protein 135 
ZNF132                0.470   zinc finger protein 132 
ZNF548                0.467   zinc finger protein 548 
ZNF304                0.463   zinc finger protein 304 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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