Guide to the Human Genome
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Name: ANAPC1 Sequence: fasta or formatted (1944aa) NCBI GI: 12056971
Description:

anaphase promoting complex subunit 1

Referenced in:

Anaphase-promoting Complex

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0        116           2
 C cysteine            2.0         38           1
 D aspartate           4.2         82           3
 E glutamate           6.2        121           3
 F phenylalanine       3.4         67           2
 G glycine             5.6        108           3
 H histidine           3.4         67           2
 I isoleucine          4.5         88           2
 K lysine              4.1         79           2
 L leucine            12.7        246           3
 M methionine          2.9         57           2
 N asparagine          4.1         80           2
 P proline             6.2        120           2
 Q glutamine           4.3         83           2
 R arginine            4.2         81           2
 S serine              9.8        191           3
 T threonine           5.3        104           2
 V valine              6.7        131           2
 W tryptophan          1.3         25           1
 Y tyrosine            3.1         60           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase promoting complex subunit 1 
LOC730268             0.319   PREDICTED: similar to anaphase promoting complex su...
LOC100133982          0.141   PREDICTED: similar to anaphase promoting complex su...
LOC730268             0.112   PREDICTED: similar to anaphase promoting complex su...
LOC100134261          0.071   PREDICTED: similar to anaphase promoting complex su...
LOC100133898          0.057   PREDICTED: similar to anaphase promoting complex su...
ZRANB2                0.004   zinc finger protein 265 isoform 1 
ZRANB2                0.004   zinc finger protein 265 isoform 2 
ZNF423                0.004   zinc finger protein 423 
QSER1                 0.003   glutamine and serine rich 1 
TRA2A                 0.003   transformer-2 alpha 
PHC3                  0.003   polyhomeotic like 3 
CRKRS                 0.003   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.003   Cdc2-related kinase, arginine/serine-rich isoform 1...
NCOA1                 0.003   nuclear receptor coactivator 1 isoform 2 
NCOA1                 0.003   nuclear receptor coactivator 1 isoform 3 
NCOA1                 0.003   nuclear receptor coactivator 1 isoform 1 
PLEKHH1               0.003   pleckstrin homology domain containing, family H (wit...
WAC                   0.002   WW domain-containing adapter with a coiled-coil regi...
WAC                   0.002   WW domain-containing adapter with a coiled-coil regi...
SFRS4                 0.002   splicing factor, arginine/serine-rich 4 
LOC100170229          0.002   hypothetical protein LOC100170229 
RAF1                  0.002   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
MUC6                  0.002   mucin 6, gastric 
TRERF1                0.002   transcriptional regulating factor 1 
EBF1                  0.002   early B-cell factor 
MYST2                 0.002   MYST histone acetyltransferase 2 
ANKHD1                0.002   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.002   ANKHD1-EIF4EBP3 protein 
YAP1                  0.002   Yes-associated protein 1, 65kDa isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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