NUP62CL 14365

Name: NUP62CL	Sequence: fasta or formatted (184aa)		NCBI GI: 222144277
Description: nucleoporin 62kDa C-terminal like		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 8 2 C cysteine 0.0 0 0 D aspartate 3.8 7 1 E glutamate 10.3 19 2 F phenylalanine 4.9 9 1 G glycine 4.3 8 1 H histidine 2.7 5 1 I isoleucine 4.9 9 1 K lysine 2.2 4 1 L leucine 12.5 23 2 M methionine 1.6 3 1 N asparagine 5.4 10 1 P proline 1.1 2 1 Q glutamine 7.1 13 3 R arginine 2.7 5 1 S serine 8.2 15 1 T threonine 14.7 27 4 V valine 5.4 10 2 W tryptophan 1.1 2 1 Y tyrosine 2.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin 62kDa C-terminal like NUP62 0.439 nucleoporin 62kDa NUP62 0.439 nucleoporin 62kDa NUP62 0.439 nucleoporin 62kDa NUP62 0.439 nucleoporin 62kDa LOC730474 0.056 PREDICTED: hypothetical protein, partial LOC100131251 0.050 PREDICTED: hypothetical protein LOC730474 0.050 PREDICTED: hypothetical protein LOC100131251 0.050 PREDICTED: hypothetical protein LOC100134138 0.042 PREDICTED: similar to mucin, partial LOC100294470 0.039 PREDICTED: hypothetical protein, partial MUC3A 0.036 PREDICTED: mucin 3A, intestinal LOC732156 0.036 PREDICTED: similar to Mucin-3A MUC5AC 0.033 mucin 5AC MUC5B 0.033 mucin 5, subtype B, tracheobronchial TCERG1 0.030 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.030 transcription elongation regulator 1 isoform 1 [Homo... MUC3A 0.024 PREDICTED: mucin 3A, cell surface associated, parti... LOC100131514 0.024 PREDICTED: similar to intestinal mucin MUC3B SYCP1 0.024 synaptonemal complex protein 1 ANK3 0.024 ankyrin 3 isoform 1 AFF2 0.024 fragile X mental retardation 2 KRT7 0.024 keratin 7 EEA1 0.024 early endosome antigen 1, 162kD DNAH1 0.024 dynein, axonemal, heavy chain 1 SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... LOC100132635 0.021 PREDICTED: similar to mucin 5, partial LOC100131514 0.021 PREDICTED: similar to hCG1747327, partial LOC729792 0.021 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.