Guide to the Human Genome
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Name: HYAL1 Sequence: fasta or formatted (176aa) NCBI GI: 24497572
Description:

hyaluronoglucosaminidase 1 isoform 5

Referenced in:

Lysosomes and Related Organelles
N-Acetyl Sugars and Hyaluronan

Other entries for this name:
alt prot [435aa] hyaluronoglucosaminidase 1 isoform 1
alt prot [435aa] hyaluronoglucosaminidase 1 isoform 1
alt prot [405aa] hyaluronoglucosaminidase 1 isoform 2
alt prot [253aa] hyaluronoglucosaminidase 1 isoform 3
alt prot [435aa] hyaluronoglucosaminidase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         18           2
 C cysteine            4.0          7           1
 D aspartate           2.8          5           1
 E glutamate           5.7         10           1
 F phenylalanine       3.4          6           1
 G glycine             7.4         13           3
 H histidine           2.8          5           1
 I isoleucine          2.3          4           1
 K lysine              2.8          5           1
 L leucine            11.9         21           4
 M methionine          2.3          4           1
 N asparagine          2.8          5           1
 P proline             6.2         11           1
 Q glutamine           5.1          9           1
 R arginine            5.1          9           2
 S serine              7.4         13           1
 T threonine           5.1          9           2
 V valine              6.8         12           2
 W tryptophan          2.8          5           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hyaluronoglucosaminidase 1 isoform 5 
HYAL1                 1.000   hyaluronoglucosaminidase 1 isoform 3 
HYAL1                 1.000   hyaluronoglucosaminidase 1 isoform 1 
HYAL1                 1.000   hyaluronoglucosaminidase 1 isoform 1 
HYAL1                 1.000   hyaluronoglucosaminidase 1 isoform 1 
HYAL1                 0.776   hyaluronoglucosaminidase 1 isoform 2 
SPAM1                 0.294   sperm adhesion molecule 1 isoform 1 
SPAM1                 0.294   sperm adhesion molecule 1 isoform 2 
HYAL3                 0.273   hyaluronoglucosaminidase 3 
HYAL4                 0.265   hyaluronoglucosaminidase 4 
HYAL2                 0.256   hyaluronoglucosaminidase 2 
HYAL2                 0.256   hyaluronoglucosaminidase 2 
SLIT2                 0.023   slit homolog 2 
DLK1                  0.017   delta-like 1 homolog 
STARD9                0.017   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.017   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.017   PREDICTED: StAR-related lipid transfer (START) doma...
NOTCH1                0.015   notch1 preproprotein 
NOTCH4                0.015   notch4 preproprotein 
CRB1                  0.015   crumbs homolog 1 precursor 
CRB2                  0.012   crumbs homolog 2 
JAG1                  0.009   jagged 1 precursor 
DLK2                  0.009   EGF-like-domain, multiple 9 
DLK2                  0.009   EGF-like-domain, multiple 9 
FAT4                  0.009   FAT tumor suppressor homolog 4 
PROS1                 0.009   protein S, alpha preproprotein 
ABL1                  0.009   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.009   c-abl oncogene 1, receptor tyrosine kinase isoform b...
NOTCH3                0.009   Notch homolog 3 
TLE4                  0.009   transducin-like enhancer protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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