Guide to the Human Genome
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Name: HYAL3 Sequence: fasta or formatted (417aa) NCBI GI: 15208651
Description:

hyaluronoglucosaminidase 3

Referenced in:

N-Acetyl Sugars and Hyaluronan

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         49           2
 C cysteine            3.1         13           1
 D aspartate           3.1         13           2
 E glutamate           3.6         15           3
 F phenylalanine       3.6         15           1
 G glycine             9.1         38           2
 H histidine           6.2         26           2
 I isoleucine          1.9          8           2
 K lysine              1.0          4           1
 L leucine            11.5         48           1
 M methionine          1.4          6           1
 N asparagine          2.6         11           1
 P proline             7.7         32           2
 Q glutamine           5.3         22           2
 R arginine            7.0         29           3
 S serine              5.0         21           3
 T threonine           3.1         13           2
 V valine              5.3         22           2
 W tryptophan          4.1         17           1
 Y tyrosine            3.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hyaluronoglucosaminidase 3 
HYAL2                 0.333   hyaluronoglucosaminidase 2 
HYAL2                 0.333   hyaluronoglucosaminidase 2 
HYAL1                 0.324   hyaluronoglucosaminidase 1 isoform 1 
HYAL1                 0.324   hyaluronoglucosaminidase 1 isoform 1 
HYAL1                 0.324   hyaluronoglucosaminidase 1 isoform 1 
HYAL4                 0.287   hyaluronoglucosaminidase 4 
HYAL1                 0.276   hyaluronoglucosaminidase 1 isoform 2 
SPAM1                 0.266   sperm adhesion molecule 1 isoform 1 
SPAM1                 0.266   sperm adhesion molecule 1 isoform 2 
HYAL1                 0.189   hyaluronoglucosaminidase 1 isoform 3 
HYAL1                 0.107   hyaluronoglucosaminidase 1 isoform 5 
JAG2                  0.013   jagged 2 isoform b precursor 
JAG2                  0.013   jagged 2 isoform a precursor 
NAGPA                 0.013   N-acetylglucosamine-1-phosphodiester alpha-N-acetylg...
NOTCH1                0.010   notch1 preproprotein 
JAG1                  0.009   jagged 1 precursor 
TNC                   0.009   tenascin C precursor 
CRB2                  0.008   crumbs homolog 2 
STAB1                 0.008   stabilin 1 precursor 
ODZ1                  0.007   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.007   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.007   odz, odd Oz/ten-m homolog 1 isoform 1 
NOTCH3                0.007   Notch homolog 3 
CELSR2                0.007   cadherin EGF LAG seven-pass G-type receptor 2 
EYS                   0.007   eyes shut homolog isoform 2 
EYS                   0.007   eyes shut homolog isoform 1 
EYS                   0.007   eyes shut homolog isoform 3 
CRB1                  0.007   crumbs homolog 1 precursor 
PEAR1                 0.007   platelet endothelial aggregation receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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