Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF256 Sequence: fasta or formatted (627aa) NCBI GI: 37574603
Description:

zinc finger protein 256

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         18           3
 C cysteine            6.1         38           1
 D aspartate           2.1         13           1
 E glutamate           7.0         44           2
 F phenylalanine       4.8         30           2
 G glycine             7.3         46           2
 H histidine           8.0         50           2
 I isoleucine          2.9         18           1
 K lysine              6.5         41           2
 L leucine             6.4         40           2
 M methionine          1.0          6           1
 N asparagine          2.2         14           1
 P proline             3.3         21           1
 Q glutamine           5.6         35           3
 R arginine            7.3         46           2
 S serine             11.5         72           3
 T threonine           5.9         37           2
 V valine              4.8         30           1
 W tryptophan          0.8          5           1
 Y tyrosine            3.7         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 256 
ZNF814                0.527   zinc finger protein 814 
ZNF418                0.526   zinc finger protein 418 
ZNF304                0.511   zinc finger protein 304 
ZNF132                0.511   zinc finger protein 132 
ZNF530                0.495   zinc finger protein 530 
ZNF551                0.492   zinc finger protein 551 
ZNF17                 0.486   zinc finger protein 17 
ZNF211                0.484   zinc finger protein 211 isoform 2 
ZNF417                0.484   zinc finger protein 417 
ZNF587                0.483   zinc finger protein 587 
ZNF211                0.481   zinc finger protein 211 isoform 1 
ZNF549                0.467   zinc finger protein 549 
LOC100293516          0.462   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.461   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.461   PREDICTED: hypothetical protein XP_002343703 
ZNF416                0.460   zinc finger protein 416 
ZNF420                0.420   zinc finger protein 420 
ZNF749                0.419   zinc finger protein 749 
ZNF776                0.417   zinc finger protein 776 
ZNF154                0.415   zinc finger protein 154 
ZNF585A               0.415   zinc finger protein 585A 
ZNF585A               0.415   zinc finger protein 585A 
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.414   zinc finger protein 84 
ZNF84                 0.414   zinc finger protein 84 
ZNF585B               0.413   zinc finger protein 585B 
ZNF347                0.411   zinc finger protein 347 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press