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Search of human proteins with 24307899
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24307899 Era-like 1 [Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24307899 Era-like 1 [Homo sapiens] 876 0.0
gi|8922873 GTPase, IMAP family member 4 [Homo sapiens] 52 8e-07
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H... 45 2e-04
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho... 44 4e-04
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 43 6e-04
gi|24308117 GTP binding protein 5 [Homo sapiens] 42 8e-04
gi|56119214 GTPase, IMAP family member 6 [Homo sapiens] 40 0.004
gi|18594498 GTPase, IMAP family member 1 [Homo sapiens] 39 0.009
gi|13027612 RAS-like family 11 member B [Homo sapiens] 39 0.009
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens] 39 0.009
gi|28416956 GTPase, IMAP family member 8 [Homo sapiens] 38 0.016
gi|23397516 GTPase, IMAP family member 7 [Homo sapiens] 38 0.016
gi|223029424 large subunit GTPase 1 [Homo sapiens] 38 0.021
gi|4758796 developmentally regulated GTP binding protein 1 [Homo... 38 0.021
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 38 0.021
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo... 37 0.027
gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo... 37 0.027
gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo s... 37 0.027
gi|192807327 Ras-related associated with diabetes [Homo sapiens] 37 0.027
gi|4759054 Ras-related associated with diabetes [Homo sapiens] 37 0.027
gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens] 37 0.027
gi|55953087 G protein-binding protein CRFG [Homo sapiens] 37 0.027
gi|4557537 developmentally regulated GTP binding protein 2 [Homo... 37 0.035
gi|28416949 GTPase, IMAP family member 5 [Homo sapiens] 36 0.060
gi|33667040 NLR family, pyrin domain containing 8 [Homo sapiens] 36 0.079
gi|93277113 GTP_binding protein [Homo sapiens] 36 0.079
gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Ho... 35 0.10
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 35 0.13
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 35 0.13
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 35 0.13
>gi|24307899 Era-like 1 [Homo sapiens]
Length = 437
Score = 876 bits (2264), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASA 60
MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASA
Sbjct: 1 MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASA 60
Query: 61 SRSNGQGSALDHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLG 120
SRSNGQGSALDHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLG
Sbjct: 61 SRSNGQGSALDHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLG 120
Query: 121 APNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRH 180
APNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRH
Sbjct: 121 APNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRH 180
Query: 181 HLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC 240
HLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC
Sbjct: 181 HLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC 240
Query: 241 LKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGNPQRIGWP 300
LKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGNPQRIGWP
Sbjct: 241 LKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGNPQRIGWP 300
Query: 301 HFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHL 360
HFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHL
Sbjct: 301 HFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHL 360
Query: 361 PQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM 420
PQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM
Sbjct: 361 PQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM 420
Query: 421 DIFLCDVDIRLSVKLLK 437
DIFLCDVDIRLSVKLLK
Sbjct: 421 DIFLCDVDIRLSVKLLK 437
>gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]
Length = 329
Score = 52.4 bits (124), Expect = 8e-07
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 82 SVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVF-- 139
S P P S Q+ P NS+ LR+VL+G AGKS N +LGRKVF
Sbjct: 9 SFNPSTPGASYGPGRQE---------PRNSQ-LRIVLVGKTGAGKSATGNSILGRKVFHS 58
Query: 140 PVSRKVHTTRCQALGVITEKETQVILLDTPGI 171
+ K T +C+ + KET+++++DTPGI
Sbjct: 59 GTAAKSITKKCEKRS-SSWKETELVVVDTPGI 89
>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
sapiens]
Length = 524
Score = 44.7 bits (104), Expect = 2e-04
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 79 PDSSVTPCVPAVSMN---RDEQDVLLVHHPDMPENSRV---LRVVLLGAPNAGKSTLSNQ 132
P S++ C+ + + + R Q L H D R+ + VV+ G PNAGKS+L N
Sbjct: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
Query: 133 LLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWK 192
L + V VS + TTR + V+L DT G+ ++ +E + +
Sbjct: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL----REGVGPVEQEGVRRARE 356
Query: 193 SMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS------VLVMNKVDCL 241
+E ADL++ ++D SD + + + + +Q PS +LV+NK D L
Sbjct: 357 RLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLL 411
>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
sapiens]
Length = 492
Score = 43.5 bits (101), Expect = 4e-04
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIIS 173
+ VV+ G PNAGKS+L N L + V VS + TTR + V+L DT G+
Sbjct: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL-- 307
Query: 174 PGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS-- 231
++ +E + + +E ADL++ ++D SD + + + + +Q PS
Sbjct: 308 --REGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDS 365
Query: 232 ----VLVMNKVDCL 241
+LV+NK D L
Sbjct: 366 SQRLLLVLNKSDLL 379
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 42.7 bits (99), Expect = 6e-04
Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 24/123 (19%)
Query: 57 LASASRSNGQGSALDH-----FLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENS 111
+A A+ NG G + L Q DS++ P P +D
Sbjct: 315 VAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDG--------------- 359
Query: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGI 171
V+ + +G PN GKS+L N L+GRKV VSR TR +T V L D PG+
Sbjct: 360 -VVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLT---PSVKLCDCPGL 415
Query: 172 ISP 174
I P
Sbjct: 416 IFP 418
Score = 29.3 bits (64), Expect = 7.4
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 158 EKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP 217
E+ Q L G S K L W+ +E +D+V+++ D+ P
Sbjct: 149 ERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVV--NFPP 206
Query: 218 QLLRCLTKYSQIPSVLVMNKVD 239
L +T + VLV+NKVD
Sbjct: 207 ALYEYVTGELGLALVLVLNKVD 228
>gi|24308117 GTP binding protein 5 [Homo sapiens]
Length = 406
Score = 42.4 bits (98), Expect = 8e-04
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 105 PDMPENSRVLRVVL--------LGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVI 156
P P RVL + L +G PNAGKS+L + + S T + V
Sbjct: 208 PGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVH 267
Query: 157 TEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVS--DKWTR-N 213
E Q+ + D PGII Q R L + +E ++ +VD+S + WT+ +
Sbjct: 268 YEGHLQIAVADIPGIIRGAHQNR-----GLGSAFLRHIERCRFLLFVVDLSQPEPWTQVD 322
Query: 214 QLSPQLLRCLTKYSQIPSVLVMNKVDCLKQKSVLLELTAALTEGVV 259
L +L S P +V NK+D + ++ L +L L + V+
Sbjct: 323 DLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVI 368
>gi|56119214 GTPase, IMAP family member 6 [Homo sapiens]
Length = 292
Score = 40.0 bits (92), Expect = 0.004
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFP---VSRKVHTTRCQALGVITEKETQVILLDT 168
R LR++L+G +GKS N +LGR VF +R V T + KE +VI DT
Sbjct: 39 RRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVI--DT 96
Query: 169 PGIISP 174
P I+SP
Sbjct: 97 PNILSP 102
>gi|18594498 GTPase, IMAP family member 1 [Homo sapiens]
Length = 306
Score = 38.9 bits (89), Expect = 0.009
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 92 MNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLG-RKVFPVSRKVHTTRC 150
M DE++V + R++L+G AGKS N +LG R+ F TR
Sbjct: 6 MATDEENVYGLEENAQSRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRA 65
Query: 151 QALGVITEKETQVILLDTPGIIS-------PGKQKRHHLEL 184
G + V ++DTP I S PG ++R H L
Sbjct: 66 CTTGSRRWDKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYL 106
>gi|13027612 RAS-like family 11 member B [Homo sapiens]
Length = 248
Score = 38.9 bits (89), Expect = 0.009
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRK----VHTTRCQALGVITEKETQVILLD 167
R++++ ++GA GK+ L + L ++ + ++T + Q G + Q D
Sbjct: 32 RLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQ----D 87
Query: 168 TPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP--QLLRCLTK 225
TPGI + H LS E + + AD VV++ ++D + +S Q ++ L
Sbjct: 88 TPGI------QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHL 141
Query: 226 YSQIPSVLVMNKVDCLKQKSV 246
+++P V+V NK D L K V
Sbjct: 142 GTRLPVVVVANKADLLHIKQV 162
>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
Length = 182
Score = 38.9 bits (89), Expect = 0.009
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIIS 173
+R++LLG NAGK+TL QL + H T Q I ++Q L+ I
Sbjct: 18 VRILLLGLDNAGKTTLLKQLASEDI------SHITPTQGFN-IKSVQSQGFKLNVWDI-- 68
Query: 174 PGKQKRHHLELSLLEDPWKS-MESADLVVVLVDVSDKWTRNQLSPQLLRCL--TKYSQIP 230
G Q++ + WK+ E+ D+++ ++D +D+ + +L L K S +P
Sbjct: 69 -GGQRK-------IRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVP 120
Query: 231 SVLVMNKVDCL 241
++ NK D L
Sbjct: 121 VLIFANKQDLL 131
>gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]
Length = 665
Score = 38.1 bits (87), Expect = 0.016
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVF--PVSRKVHTTRCQALGVITEKETQVILLDTPGI 171
LR++LLG +GKS N +LG+ VF S + CQ + +E +V+++DTP +
Sbjct: 11 LRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVL-RERKVVVIDTPDL 69
Query: 172 IS-----PGKQK--RHHLELS 185
S KQ+ +H LELS
Sbjct: 70 FSSIACAEDKQRNIQHCLELS 90
Score = 32.7 bits (73), Expect = 0.67
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVS-RKVHTTRCQALGVITEKETQVILLDTP 169
L +VL+G GKS N +LG VF R T+ G T +V+++DTP
Sbjct: 439 LNIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTWDGQEVVVVDTP 495
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 105 PDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITE-KETQV 163
P+ + L V+L+G AGKS N +LGR+ F + L ++ +V
Sbjct: 239 PEQNPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKKV 298
Query: 164 ILLDTPGIIS 173
++D P I S
Sbjct: 299 SIIDAPDISS 308
>gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]
Length = 300
Score = 38.1 bits (87), Expect = 0.016
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFP--VSRKVHTTRCQALGVITEKETQ---VILL 166
R LR+VL+G +GKS +N +LG ++F ++ + T CQ +E Q ++++
Sbjct: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQK----ASREWQGRDLLVV 62
Query: 167 DTPGI 171
DTPG+
Sbjct: 63 DTPGL 67
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 37.7 bits (86), Expect = 0.021
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKV-HTTRCQALGVITEKETQVILLDTPGII 172
L V L+G PN GKS+ N ++G K VS HT Q L V E + L D PG++
Sbjct: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYV----EPGLCLCDCPGLV 442
Query: 173 SP 174
P
Sbjct: 443 MP 444
>gi|4758796 developmentally regulated GTP binding protein 1 [Homo
sapiens]
Length = 367
Score = 37.7 bits (86), Expect = 0.021
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 115 RVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISP 174
R+ +G P+ GKSTL + L G V+ TT GVI K ++ LLD PGII
Sbjct: 66 RIGFVGFPSVGKSTLLSNLAG-VYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124
Query: 175 GK 176
K
Sbjct: 125 AK 126
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 37.7 bits (86), Expect = 0.021
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 17/156 (10%)
Query: 187 LEDPWKS-MESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC---LK 242
L DPW S + + D + + + QL QL++ L Q P ++ +D ++
Sbjct: 174 LPDPWVSQITNTDTLAAVAQILQSPQGQQLQ-QLIQTLQIQQQKPQPSILQALDAGLVVQ 232
Query: 243 QKSVLLELTAA---------LTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGN 293
+++ +LTAA L +GV KKL R F H P + P +Q
Sbjct: 233 LQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDF-GEDSEHSEEPKKEIPASQLSHV 291
Query: 294 PQRIGWPHFKEIFMLSALSQEDVKTLKQYLLTQAQP 329
+ + F +I L Q++++ L+Q LL Q QP
Sbjct: 292 SESVNNSIFHQI--AEQLQQQNLEHLRQQLLEQQQP 325
>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
sapiens]
Length = 1977
Score = 37.4 bits (85), Expect = 0.027
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 89 AVSMNRDEQDVLLV--HHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVH 146
A+S D+++ + + HHP+ + + + P + +L + V +
Sbjct: 642 ALSSVLDQEEAMEIKEHHPEEGSSGSEVEEI----PETPCESQGEELKEENMESVPLHLS 697
Query: 147 TTRCQALGVITEKE-------------TQVILLDTPGIISPGKQKRHHLELSLLEDPWKS 193
T Q+ G+ +KE T VI +D+P ++ Q+ H E ++ W+
Sbjct: 698 LTETQSQGLCLQKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKE----QEAWEE 753
Query: 194 MESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS---------VLVMNKVDCLKQK 244
S D VV+VDV + R +S + L + K S S N++D ++K
Sbjct: 754 ATSEDSSVVIVDVKEPSPRVDVSCEPLEGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEK 813
Query: 245 SVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQ 289
SV E L G + ++ + S P P D Q
Sbjct: 814 SV--EYEGDLKSGTAETEPVEQDSSQPSLPLVRADDPLRLDQELQ 856
>gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo
sapiens]
Length = 1975
Score = 37.4 bits (85), Expect = 0.027
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 89 AVSMNRDEQDVLLV--HHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVH 146
A+S D+++ + + HHP+ + + + P + +L + V +
Sbjct: 642 ALSSVLDQEEAMEIKEHHPEEGSSGSEVEEI----PETPCESQGEELKEENMESVPLHLS 697
Query: 147 TTRCQALGVITEKE-------------TQVILLDTPGIISPGKQKRHHLELSLLEDPWKS 193
T Q+ G+ +KE T VI +D+P ++ Q+ H E ++ W+
Sbjct: 698 LTETQSQGLCLQKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKE----QEAWEE 753
Query: 194 MESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS---------VLVMNKVDCLKQK 244
S D VV+VDV + R +S + L + K S S N++D ++K
Sbjct: 754 ATSEDSSVVIVDVKEPSPRVDVSCEPLEGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEK 813
Query: 245 SVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQ 289
SV E L G + ++ + S P P D Q
Sbjct: 814 SV--EYEGDLKSGTAETEPVEQDSSQPSLPLVRADDPLRLDQELQ 856
>gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo
sapiens]
Length = 1972
Score = 37.4 bits (85), Expect = 0.027
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 89 AVSMNRDEQDVLLV--HHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVH 146
A+S D+++ + + HHP+ + + + P + +L + V +
Sbjct: 637 ALSSVLDQEEAMEIKEHHPEEGSSGSEVEEI----PETPCESQGEELKEENMESVPLHLS 692
Query: 147 TTRCQALGVITEKE-------------TQVILLDTPGIISPGKQKRHHLELSLLEDPWKS 193
T Q+ G+ +KE T VI +D+P ++ Q+ H E ++ W+
Sbjct: 693 LTETQSQGLCLQKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKE----QEAWEE 748
Query: 194 MESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS---------VLVMNKVDCLKQK 244
S D VV+VDV + R +S + L + K S S N++D ++K
Sbjct: 749 ATSEDSSVVIVDVKEPSPRVDVSCEPLEGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEK 808
Query: 245 SVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQ 289
SV E L G + ++ + S P P D Q
Sbjct: 809 SV--EYEGDLKSGTAETEPVEQDSSQPSLPLVRADDPLRLDQELQ 851
>gi|192807327 Ras-related associated with diabetes [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.027
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 88 PAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHT 147
P + D +D L D E+ V +V+LLGAP GKS L+ G + P +
Sbjct: 68 PRLDWPEDSEDSLSSGGSDSDES--VYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGH 125
Query: 148 TRCQALGVITEKETQVILLD----TPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVL 203
T +++ V+ +E +++ D G PG M D V++
Sbjct: 126 TYDRSI-VVDGEEASLMVYDIWEQDGGRWLPG----------------HCMAMGDAYVIV 168
Query: 204 VDVSDKWT---RNQLSPQLLRCLTKYSQIPSVLVMNKVDCLKQKSVLLE 249
V+DK + ++L QL R + +P +LV NK D ++ + V ++
Sbjct: 169 YSVTDKGSFEKASELRVQLRRA-RQTDDVPIILVGNKSDLVRSREVSVD 216
>gi|4759054 Ras-related associated with diabetes [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.027
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 88 PAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHT 147
P + D +D L D E+ V +V+LLGAP GKS L+ G + P +
Sbjct: 68 PRLDWPEDSEDSLSSGGSDSDES--VYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGH 125
Query: 148 TRCQALGVITEKETQVILLD----TPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVL 203
T +++ V+ +E +++ D G PG M D V++
Sbjct: 126 TYDRSI-VVDGEEASLMVYDIWEQDGGRWLPG----------------HCMAMGDAYVIV 168
Query: 204 VDVSDKWT---RNQLSPQLLRCLTKYSQIPSVLVMNKVDCLKQKSVLLE 249
V+DK + ++L QL R + +P +LV NK D ++ + V ++
Sbjct: 169 YSVTDKGSFEKASELRVQLRRA-RQTDDVPIILVGNKSDLVRSREVSVD 216
>gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens]
Length = 298
Score = 37.4 bits (85), Expect = 0.027
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 115 RVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISP 174
RVVLLG P GK++L++ G++ + ++ + + ++T ++++DT
Sbjct: 82 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDT------ 135
Query: 175 GKQKRHHLELSLLEDPWKS---MESADLVVVLVDVSDKWTRNQLSPQ--LLRCLTKYSQI 229
E L+ W ++ V++ ++D+ + S LR + +
Sbjct: 136 -------WEAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHV 188
Query: 230 PSVLVMNKVDCLKQKSVLLE 249
P +LV NK D + + V +E
Sbjct: 189 PIILVGNKADLARCREVSVE 208
>gi|55953087 G protein-binding protein CRFG [Homo sapiens]
Length = 634
Score = 37.4 bits (85), Expect = 0.027
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 105 PDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVI 164
P + N+R L +L G PN GKS+ N++ V V TT+ +G + K +
Sbjct: 162 PTIDPNTRTL--LLCGYPNVGKSSFINKVTRADV-DVQPYAFTTKSLFVGHMDYKYLRWQ 218
Query: 165 LLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP-QLLRCL 223
++DTPGI+ + R+ +E+ + + V+ L + R QL Q +R L
Sbjct: 219 VVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPL 278
Query: 224 TKYSQIPSVLVMNKVD 239
+ P ++V NK D
Sbjct: 279 --FINKPLIVVANKCD 292
>gi|4557537 developmentally regulated GTP binding protein 2 [Homo
sapiens]
Length = 364
Score = 37.0 bits (84), Expect = 0.035
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 115 RVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISP 174
RV L+G P+ GKST + + S + T C GVI K + LLD PGII
Sbjct: 64 RVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIP-GVIEYKGANIQLLDLPGIIEG 122
Query: 175 GKQKRHHLELSLLEDPWKSMESADLVVVLVDVS 207
Q + + +AD++++++D +
Sbjct: 123 AAQGKGRGRQVI-----AVARTADVIIMMLDAT 150
>gi|28416949 GTPase, IMAP family member 5 [Homo sapiens]
Length = 307
Score = 36.2 bits (82), Expect = 0.060
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVS-RKVHTTRCQALGVITEKETQVILLDTPGI 171
LR++L+G GKS N +LG+ VF R TR + T +V+++DTP I
Sbjct: 28 LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKTGTWNGRKVLVVDTPSI 86
>gi|33667040 NLR family, pyrin domain containing 8 [Homo sapiens]
Length = 1048
Score = 35.8 bits (81), Expect = 0.079
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 92 MNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLL---GRKVFPVSRK--VH 146
++R E+ + + P P+ + V + GAP GK+ L+ +++ R F ++
Sbjct: 182 VHRHEEYLPCLLLPKRPQGRQPKTVAIQGAPGIGKTILAKKVMFEWARNKFYAHKRWCAF 241
Query: 147 TTRCQALGVITEKE-TQVILLDTPG---IISPGKQKRHHLELSLLEDPWKSMESADLVVV 202
CQ + T++ +++I PG ++S K +L LL D ++ + S L+
Sbjct: 242 YFHCQEVNQTTDQSFSELIEQKWPGSQDLVSKIMSKPD--QLLLLLDGFEELTST-LIDR 298
Query: 203 LVDVSDKWTRNQLSPQLLRCLTKYSQIP--SVLVMNKVDCLKQKSVLLELTAALT-EGVV 259
L D+S+ W + LL L + +P ++L+M + + LL+ + +T G
Sbjct: 299 LEDLSEDWRQKLPGSVLLSSLLSKTMLPEATLLIMIRFTSWQTCKPLLKCPSLVTLPGFN 358
Query: 260 NGKKLKMRQAFHSH 273
+K+K Q + H
Sbjct: 359 TMEKIKYFQMYFGH 372
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 35.8 bits (81), Expect = 0.079
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 116 VVLLGAPNAGKSTLSNQLLGR-----KVFPVSRKVHTTRCQALGVITEKETQVILLDTPG 170
++++G PN GKS+L N L + K V + TR + + + LLDTPG
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
Query: 171 IISP 174
+++P
Sbjct: 206 VLAP 209
>gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Homo
sapiens]
Length = 445
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 230 PSVLVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPS---PAVKDP 286
PS+L MN++D + + L E+ V+ K+ M QA GT+ P P +K P
Sbjct: 79 PSLLGMNQMDMNQWSASLYEMNQ------VDMKQPSMSQAGMRQSGTNLPDINQPGMKQP 132
Query: 287 NTQSVGNPQRIGWPHFKEIFMLSALS 312
T +G Q WP +LS S
Sbjct: 133 GTWQLGRSQPGMWPQSLSELVLSEAS 158
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 35.0 bits (79), Expect = 0.13
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 111 SRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPG 170
S+ +RV ++G PN GKS++ N L ++ V + TR + + Q+ ++D+P
Sbjct: 240 SKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQ---VVPLDKQITIIDSPS 296
Query: 171 -IISP 174
I+SP
Sbjct: 297 FIVSP 301
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 35.0 bits (79), Expect = 0.13
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 111 SRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPG 170
S+ +RV ++G PN GKS++ N L ++ V + TR + + Q+ ++D+P
Sbjct: 240 SKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQ---VVPLDKQITIIDSPS 296
Query: 171 -IISP 174
I+SP
Sbjct: 297 FIVSP 301
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 35.0 bits (79), Expect = 0.13
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 111 SRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPG 170
S+ +RV ++G PN GKS++ N L ++ V + TR + + Q+ ++D+P
Sbjct: 252 SKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQ---VVPLDKQITIIDSPS 308
Query: 171 -IISP 174
I+SP
Sbjct: 309 FIVSP 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,674,172
Number of Sequences: 37866
Number of extensions: 797246
Number of successful extensions: 2334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2287
Number of HSP's gapped (non-prelim): 95
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.