Guide to the Human Genome
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Name: GIMAP5 Sequence: fasta or formatted (307aa) NCBI GI: 28416949
Description:

GTPase, IMAP family member 5

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           1
 C cysteine            2.6          8           1
 D aspartate           4.2         13           2
 E glutamate           7.2         22           2
 F phenylalanine       5.2         16           2
 G glycine             7.8         24           2
 H histidine           2.6          8           1
 I isoleucine          4.9         15           2
 K lysine              5.2         16           1
 L leucine            11.7         36           3
 M methionine          1.3          4           1
 N asparagine          3.6         11           2
 P proline             2.0          6           2
 Q glutamine           6.5         20           3
 R arginine            6.5         20           2
 S serine              4.9         15           1
 T threonine           5.2         16           1
 V valine              7.2         22           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTPase, IMAP family member 5 
GIMAP2                0.331   GTPase, IMAP family member 2 
GIMAP1                0.309   GTPase, IMAP family member 1 
GIMAP6                0.275   GTPase, IMAP family member 6 
GIMAP7                0.275   GTPase, IMAP family member 7 
GIMAP4                0.258   GTPase, IMAP family member 4 
GIMAP8                0.233   GTPase, IMAP family member 8 
ERAL1                 0.018   Era-like 1 
LOC100130644          0.018   PREDICTED: similar to hCG2036814 
LOC100130644          0.018   PREDICTED: similar to hCG2036814 
LOC100288276          0.018   PREDICTED: hypothetical protein XP_002342504 
ALS2CR12              0.015   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
ALS2CR12              0.015   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
GOLGB1                0.013   golgi autoantigen, golgin subfamily b, macrogolgin ...
TCHH                  0.008   trichohyalin 
PLEC1                 0.008   plectin 1 isoform 11 
PLEC1                 0.008   plectin 1 isoform 10 
PLEC1                 0.008   plectin 1 isoform 8 
PLEC1                 0.008   plectin 1 isoform 7 
PLEC1                 0.008   plectin 1 isoform 6 
PLEC1                 0.008   plectin 1 isoform 3 
PLEC1                 0.008   plectin 1 isoform 2 
PLEC1                 0.008   plectin 1 isoform 1 
DHX35                 0.008   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
ZC3H18                0.008   zinc finger CCCH-type containing 18 
CYP4A11               0.008   cytochrome P450, family 4, subfamily A, polypeptide...
SEPT2                 0.007   septin 2 
SEPT2                 0.007   septin 2 
SEPT2                 0.007   septin 2 
SEPT2                 0.007   septin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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