Guide to the Human Genome
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Name: GIMAP7 Sequence: fasta or formatted (300aa) NCBI GI: 23397516
Description:

GTPase, IMAP family member 7

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         17           2
 C cysteine            3.0          9           2
 D aspartate           5.3         16           2
 E glutamate          12.7         38           3
 F phenylalanine       4.0         12           1
 G glycine             4.3         13           1
 H histidine           1.7          5           1
 I isoleucine          7.3         22           2
 K lysine             11.7         35           2
 L leucine             8.7         26           3
 M methionine          1.7          5           1
 N asparagine          3.0          9           1
 P proline             1.0          3           1
 Q glutamine           3.3         10           1
 R arginine            5.3         16           1
 S serine              7.7         23           2
 T threonine           4.7         14           2
 V valine              6.0         18           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTPase, IMAP family member 7 
GIMAP4                0.316   GTPase, IMAP family member 4 
GIMAP5                0.288   GTPase, IMAP family member 5 
GIMAP2                0.276   GTPase, IMAP family member 2 
GIMAP1                0.274   GTPase, IMAP family member 1 
GIMAP6                0.265   GTPase, IMAP family member 6 
GIMAP8                0.216   GTPase, IMAP family member 8 
MYH14                 0.032   myosin, heavy chain 14 isoform 1 
MYH14                 0.032   myosin, heavy chain 14 isoform 2 
MYH14                 0.032   myosin, heavy chain 14 isoform 3 
KIF4B                 0.030   kinesin family member 4B 
ERC1                  0.026   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.026   RAB6-interacting protein 2 isoform delta 
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.026   golgi autoantigen, golgin subfamily a-like 
MAP7D2                0.026   MAP7 domain containing 2 
LOC400352             0.025   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.025   PREDICTED: similar to Putative golgin subfamily A m...
LOC645202             0.025   PREDICTED: hypothetical protein LOC645202 
LOC440243             0.025   PREDICTED: Putative golgin subfamily A member 6-lik...
LRRIQ1                0.025   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.025   leucine-rich repeats and IQ motif containing 1 isof...
FAM81B                0.025   hypothetical protein LOC153643 
LOC727832             0.025   golgi autoantigen, golgin subfamily a-like 
WDR87                 0.025   NYD-SP11 protein 
SPEF2                 0.025   KPL2 protein isoform 2 
SPEF2                 0.025   KPL2 protein isoform 1 
GOLGA6D               0.023   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.023   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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