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Search of human proteins with 242247075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|242247075 bromodomain containing 9 isoform 2 [Homo sapiens]
(544 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|242247075 bromodomain containing 9 isoform 2 [Homo sapiens] 1083 0.0
gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens] 882 0.0
gi|41350212 bromodomain containing 7 [Homo sapiens] 217 2e-56
gi|239753965 PREDICTED: zinc finger, DHHC-type containing 11B [H... 86 9e-17
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 74 3e-13
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 65 1e-10
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 64 5e-10
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 64 5e-10
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 61 3e-09
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 59 9e-09
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] 59 9e-09
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 59 9e-09
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 58 2e-08
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 57 6e-08
gi|164419758 bromodomain containing 2 [Homo sapiens] 56 1e-07
gi|4826806 bromodomain containing 2 [Homo sapiens] 56 1e-07
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 56 1e-07
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 56 1e-07
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 55 2e-07
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 55 2e-07
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 55 2e-07
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens] 54 3e-07
gi|38788260 bromodomain PHD finger transcription factor isoform ... 54 3e-07
gi|38788274 bromodomain PHD finger transcription factor isoform ... 54 3e-07
gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens] 52 2e-06
gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens] 52 2e-06
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 51 2e-06
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 51 2e-06
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 51 2e-06
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 51 2e-06
>gi|242247075 bromodomain containing 9 isoform 2 [Homo sapiens]
Length = 544
Score = 1083 bits (2802), Expect = 0.0
Identities = 544/544 (100%), Positives = 544/544 (100%)
Query: 1 MMTGQTMSERGTKKRKRRRRRSPRRRSIWTMRKEGSERKRRSGSERGSTVTRRERLTTLI 60
MMTGQTMSERGTKKRKRRRRRSPRRRSIWTMRKEGSERKRRSGSERGSTVTRRERLTTLI
Sbjct: 1 MMTGQTMSERGTKKRKRRRRRSPRRRSIWTMRKEGSERKRRSGSERGSTVTRRERLTTLI 60
Query: 61 LGRRWRWSRPQIGQSERAGHSQPKMRAHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGY 120
LGRRWRWSRPQIGQSERAGHSQPKMRAHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGY
Sbjct: 61 LGRRWRWSRPQIGQSERAGHSQPKMRAHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGY 120
Query: 121 SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG 180
SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG
Sbjct: 121 SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG 180
Query: 181 FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS 240
FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS
Sbjct: 181 FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS 240
Query: 241 TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP 300
TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP
Sbjct: 241 TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP 300
Query: 301 VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY 360
VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY
Sbjct: 301 VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY 360
Query: 361 GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA 420
GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA
Sbjct: 361 GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA 420
Query: 421 KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD 480
KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD
Sbjct: 421 KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD 480
Query: 481 LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA 540
LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA
Sbjct: 481 LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA 540
Query: 541 SAKT 544
SAKT
Sbjct: 541 SAKT 544
>gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens]
Length = 597
Score = 882 bits (2279), Expect = 0.0
Identities = 463/544 (85%), Positives = 481/544 (88%), Gaps = 15/544 (2%)
Query: 9 ERGTKKRKRRRRRSPRRRSI--WTMRKEGSERKRRSGSERGSTVTRRERLTTLILGRRWR 66
ER +K+K+++++S + + + RK E+KR+ E T + G++
Sbjct: 61 ERHKEKKKKKKKKSEKEKHLDDEERRKRKEEKKRKREREHCDTEGEADDFDP---GKKVE 117
Query: 67 WSRPQIGQSERAGHSQPKMRAHLFSNSWNTSSASF------RDPHGFFAFPVTDAIAPGY 120
P + RA +QP A S F +DPHGFFAFPVTDAIAPGY
Sbjct: 118 VEPPP-DRPVRACRTQP---AENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGY 173
Query: 121 SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG 180
SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG
Sbjct: 174 SMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG 233
Query: 181 FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS 240
FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS
Sbjct: 234 FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDS 293
Query: 241 TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP 300
TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP
Sbjct: 294 TAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHP 353
Query: 301 VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY 360
VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY
Sbjct: 354 VDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY 413
Query: 361 GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA 420
GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA
Sbjct: 414 GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEA 473
Query: 421 KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD 480
KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD
Sbjct: 474 KVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELDPDDSHLNLDETTKLLQD 533
Query: 481 LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA 540
LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA
Sbjct: 534 LHEAQAERGGSRPSSNLSSLSNASERDQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA 593
Query: 541 SAKT 544
SAKT
Sbjct: 594 SAKT 597
>gi|41350212 bromodomain containing 7 [Homo sapiens]
Length = 651
Score = 217 bits (552), Expect = 2e-56
Identities = 141/449 (31%), Positives = 229/449 (51%), Gaps = 55/449 (12%)
Query: 102 RDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
+DP FF+FPVTD IAPGYSMIIKHPMDF TMK+KI N+Y+S+ E K +FKLMC NAM
Sbjct: 150 KDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMI 209
Query: 162 YNRPDTVYYKLAKKILHAGFKMMSKQ--------------------------AALLGNED 195
YN+P+T+YYK AKK+LH+G K++S++ + G +
Sbjct: 210 YNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDG 269
Query: 196 TAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAAD 255
+ + + K K +++ M E + + +L E ++
Sbjct: 270 GCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDKFKSNNL------EREQEQLDRIVK 323
Query: 256 EARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFT 315
E+ ++ R L + + +R DG+ +++ +P E PV L + +L G
Sbjct: 324 ESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPIVGEPGYCPVRLGMTTGRLQSGVN 383
Query: 316 TL-GFKDERRNKVT---FLS-SATTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCAL 370
TL GFK+++RNKVT +L+ ++ + +S F ++ D+ +L+YS YG+++ +
Sbjct: 384 TLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDF 443
Query: 371 SLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEAKVGDTLGDSS 430
S+ EF+ Y + D LLD +T G HSRTL +++ P DE G T +
Sbjct: 444 SIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEM-----SLPEDE---GHTRTLDT 495
Query: 431 SSVLEFMSMK-------SYPDVSVDISMLSSLGKVKKELDPDDSHL---NLDETTKLLQD 480
+ +E ++ S D + + +++ G + D +++ + LDETT+LL++
Sbjct: 496 AKEMEITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRE 555
Query: 481 LHEAQAERGGSRPSSNLSSLSNASERDQH 509
L EAQ ER +RP N+ L S R+ H
Sbjct: 556 LQEAQNERLSTRPPPNMICLLGPSYREMH 584
>gi|239753965 PREDICTED: zinc finger, DHHC-type containing 11B [Homo
sapiens]
Length = 573
Score = 85.9 bits (211), Expect = 9e-17
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 322 ERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCAL 370
+ R VTFLSSATT LSMQNNS FGDLKSDE+ELLYSAYGDETGVQCAL
Sbjct: 7 DARAPVTFLSSATTTLSMQNNSAFGDLKSDELELLYSAYGDETGVQCAL 55
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 74.3 bits (181), Expect = 3e-13
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 102 RDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
+DP FA PV+ P Y IKHPMDF TM+ ++ A YK++ EF+ DF L+ DN M
Sbjct: 581 KDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMK 640
Query: 162 YNRPDTVYYKLAKKILHAG 180
YN DTV+Y+ A ++ G
Sbjct: 641 YNARDTVFYRAAVRLRDQG 659
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 102 RDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
+DP FA PV + P Y I PMDF TM+ K+ ++ Y+++ EF+ DF L+ N M
Sbjct: 608 KDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMK 667
Query: 162 YNRPDTVYYKLAKKILHAG 180
YN DT++++ A ++ G
Sbjct: 668 YNAKDTIFHRAAVRLRDLG 686
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 63.5 bits (153), Expect = 5e-10
Identities = 55/157 (35%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 101 FRDPHGFFAFPV---TDAIAPG---YSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKL 154
F H +A+P D A G Y IIKHPMD T+K K+ A EY+ EF AD +L
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRL 424
Query: 155 MCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK 214
M N YN PD +A+K L F+M + A + +E EEPV V V
Sbjct: 425 MFSNCYKYNPPDHEVVAMARK-LQDVFEM---RFAKMPDEP---EEPVVAVSSPAVPPPT 477
Query: 215 KSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVE 251
K P S + ++ S TD + EE L E
Sbjct: 478 KVVAPPSSSDSSS-DSSSDSDSSTDDSEEERAQRLAE 513
Score = 44.3 bits (103), Expect = 3e-04
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 108 FAFPV---TDAIA---PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
FA+P DA+ P Y IIK PMD GT+K ++ N Y + E DF M N
Sbjct: 79 FAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYI 138
Query: 162 YNRP--DTVYY--KLAKKILHAGFKMMSKQAALL---------GNEDTAVEEPVPEVVP- 207
YN+P D V L K L ++ +++ ++ G ++T +P VP
Sbjct: 139 YNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPN 198
Query: 208 -VQVETAKKSKKP 219
Q T +++ P
Sbjct: 199 TTQASTPPQTQTP 211
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 63.5 bits (153), Expect = 5e-10
Identities = 55/157 (35%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 101 FRDPHGFFAFPV---TDAIAPG---YSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKL 154
F H +A+P D A G Y IIKHPMD T+K K+ A EY+ EF AD +L
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRL 424
Query: 155 MCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK 214
M N YN PD +A+K L F+M + A + +E EEPV V V
Sbjct: 425 MFSNCYKYNPPDHEVVAMARK-LQDVFEM---RFAKMPDEP---EEPVVAVSSPAVPPPT 477
Query: 215 KSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVE 251
K P S + ++ S TD + EE L E
Sbjct: 478 KVVAPPSSSDSSS-DSSSDSDSSTDDSEEERAQRLAE 513
Score = 44.3 bits (103), Expect = 3e-04
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 108 FAFPV---TDAIA---PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
FA+P DA+ P Y IIK PMD GT+K ++ N Y + E DF M N
Sbjct: 79 FAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYI 138
Query: 162 YNRP--DTVYY--KLAKKILHAGFKMMSKQAALL---------GNEDTAVEEPVPEVVP- 207
YN+P D V L K L ++ +++ ++ G ++T +P VP
Sbjct: 139 YNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPN 198
Query: 208 -VQVETAKKSKKP 219
Q T +++ P
Sbjct: 199 TTQASTPPQTQTP 211
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 60.8 bits (146), Expect = 3e-09
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 102 RDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
+D F+ PV + P Y IK PMDF TMK + A Y + +F+ DF L+ N +
Sbjct: 647 KDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLK 706
Query: 162 YNRPDTVYYKLAKKILHAG---FKMMSKQAALLG 192
YN DT++Y+ A ++ G + +QA +G
Sbjct: 707 YNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMG 740
>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
Length = 757
Score = 59.3 bits (142), Expect = 9e-09
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PVTD IAPGY I++ PMD T+K I +S EF+ D LM NA+ YN D
Sbjct: 626 FLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDH 685
Query: 168 VYYKLA 173
Y +A
Sbjct: 686 DVYHMA 691
>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
Length = 1235
Score = 59.3 bits (142), Expect = 9e-09
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PVTD IAPGY I++ PMD T+K I +S EF+ D LM NA+ YN D
Sbjct: 732 FLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDH 791
Query: 168 VYYKLA 173
Y +A
Sbjct: 792 DVYHMA 797
Score = 49.7 bits (117), Expect = 7e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV++ APGY ++K PMD ++K + +++ +F D LM NA+ YN D
Sbjct: 1128 FLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDH 1187
Query: 168 VYYKLA 173
Y +A
Sbjct: 1188 HVYHMA 1193
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 59.3 bits (142), Expect = 9e-09
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PVTD IAPGY I++ PMD T+K I +S EF+ D LM NA+ YN D
Sbjct: 805 FLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDH 864
Query: 168 VYYKLA 173
Y +A
Sbjct: 865 DVYHMA 870
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 58.2 bits (139), Expect = 2e-08
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 38 RKRRSGSERGSTVTRRERLTTLILGRRW-----RWSRPQIGQSERAGHSQPKMRAHLFSN 92
+KR+SG + R L+ GR R+S + S+R S + L
Sbjct: 1743 QKRKSGYSLNFSEGDGRRRRVLLRGRESPAAGPRYSEEGLSPSKRRRLSMRNHHSDLTFC 1802
Query: 93 SWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADF 152
D F PV + GY IIK+PMDF TM+++++ Y S EF AD
Sbjct: 1803 EIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADA 1862
Query: 153 KLMCDNAMTYNRPDT 167
L+ DN T+N D+
Sbjct: 1863 LLVFDNCQTFNEDDS 1877
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 56.6 bits (135), Expect = 6e-08
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV + PGY +IK PMDF T+++K+ + +Y ++ F D +L+ DN T+N D+
Sbjct: 2085 FLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 2144
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 105 HGFFAFPV---TDAIAPG---YSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDN 158
H +A+P DA A G Y IIKHPMD T+K K+ +Y+ EF AD +LM N
Sbjct: 365 HAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSN 424
Query: 159 AMTYNRPDTVYYKLAKKI 176
YN PD +A+K+
Sbjct: 425 CYKYNPPDHDVVAMARKL 442
Score = 46.6 bits (109), Expect = 6e-05
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 108 FAFPV---TDAIA---PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
FA+P DA+ P Y IIK PMD GT+K ++ N Y + +E DF M N
Sbjct: 95 FAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYI 154
Query: 162 YNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPE 204
YN+P +A+ + K+ ++ A + E+ + +P+
Sbjct: 155 YNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQELVVTIPK 193
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 105 HGFFAFPV---TDAIAPG---YSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDN 158
H +A+P DA A G Y IIKHPMD T+K K+ +Y+ EF AD +LM N
Sbjct: 365 HAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSN 424
Query: 159 AMTYNRPDTVYYKLAKKI 176
YN PD +A+K+
Sbjct: 425 CYKYNPPDHDVVAMARKL 442
Score = 46.6 bits (109), Expect = 6e-05
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 108 FAFPV---TDAIA---PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
FA+P DA+ P Y IIK PMD GT+K ++ N Y + +E DF M N
Sbjct: 95 FAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYI 154
Query: 162 YNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPE 204
YN+P +A+ + K+ ++ A + E+ + +P+
Sbjct: 155 YNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQELVVTIPK 193
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 55.8 bits (133), Expect = 1e-07
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 120 YSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHA 179
Y IIKHPMD T+K K+ EY F AD +LM N YN PD +A+K L
Sbjct: 348 YHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARK-LQD 406
Query: 180 GFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTD 239
F+M + E A+ P +V E+++ S++ S + S E E A L +
Sbjct: 407 VFEMRFAKMPDEPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEE-RATRLAE 465
Query: 240 STAEEHVLALVEHAADEARDRINR 263
+E + A+ E A ++ +N+
Sbjct: 466 --LQEQLKAVHEQLAALSQAPVNK 487
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 108 FAFPV---TDAIA---PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
FA+P DAI P Y IIK+PMD GT+K ++ N Y S +E DF M N
Sbjct: 55 FAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYI 114
Query: 162 YNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPE 204
YN+P +A+ + K+ ++ A + E+ + P P+
Sbjct: 115 YNKPTDDIVLMAQAL----EKIFLQKVAQMPQEEVELLPPAPK 153
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 55.8 bits (133), Expect = 1e-07
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y IK PMDF TMK + A Y + +F+ DF L+ N + YN DT++Y+ A ++
Sbjct: 669 PDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLR 728
Query: 178 HAG---FKMMSKQAALLG 192
G + +QA +G
Sbjct: 729 EQGGAVLRQARRQAEKMG 746
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 54.7 bits (130), Expect = 2e-07
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y + IK PMD ++ ++AN+Y+ + DF +M +NA TYN P+++ YK A +L
Sbjct: 662 PDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVL 720
Query: 178 HAGFKMMSKQAALLGNEDTAV 198
H ++ + L G+ED+ V
Sbjct: 721 HK--VLLETRRDLEGDEDSHV 739
Score = 47.0 bits (110), Expect = 4e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y ++ P+D ++ K+ EY V ADF+L+ +NA +Y +PD+ YK A K+
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.6 bits (109), Expect = 6e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y IIK P+D T+ +I YKS+ D L+ NA TYN P + +K A I
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y IK P+ ++ K+ EY+++ + D LM +NA YN P++ YK K+
Sbjct: 386 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQ 445
Query: 178 HAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK-KSKKPSRE 222
M +K+ L +D + + +AK KSKK R+
Sbjct: 446 QV---MQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRK 488
Score = 33.1 bits (74), Expect = 0.67
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y II PMD ++ I ++Y D KLM NA YN + Y A IL
Sbjct: 524 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA-HIL 582
Query: 178 HAGFKMMSKQAALLGNED 195
K K+ L ++D
Sbjct: 583 EKLLKEKRKELGPLPDDD 600
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 54.7 bits (130), Expect = 2e-07
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y + IK PMD ++ ++AN+Y+ + DF +M +NA TYN P+++ YK A +L
Sbjct: 694 PDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVL 752
Query: 178 HAGFKMMSKQAALLGNEDTAV 198
H ++ + L G+ED+ V
Sbjct: 753 HK--VLLETRRDLEGDEDSHV 771
Score = 47.0 bits (110), Expect = 4e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y ++ P+D ++ K+ EY V ADF+L+ +NA +Y +PD+ YK A K+
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.6 bits (109), Expect = 6e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y IIK P+D T+ +I YKS+ D L+ NA TYN P + +K A I
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y IK P+ ++ K+ EY+++ + D LM +NA YN P++ YK K+
Sbjct: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQ 477
Query: 178 HAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK-KSKKPSRE 222
M +K+ L +D + + +AK KSKK R+
Sbjct: 478 QV---MQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRK 520
Score = 33.1 bits (74), Expect = 0.67
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y II PMD ++ I ++Y D KLM NA YN + Y A IL
Sbjct: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA-HIL 614
Query: 178 HAGFKMMSKQAALLGNED 195
K K+ L ++D
Sbjct: 615 EKLLKEKRKELGPLPDDD 632
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 54.7 bits (130), Expect = 2e-07
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y + IK PMD ++ ++AN+Y+ + DF +M +NA TYN P+++ YK A +L
Sbjct: 694 PDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVL 752
Query: 178 HAGFKMMSKQAALLGNEDTAV 198
H ++ + L G+ED+ V
Sbjct: 753 HK--VLLETRRDLEGDEDSHV 771
Score = 47.0 bits (110), Expect = 4e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y ++ P+D ++ K+ EY V ADF+L+ +NA +Y +PD+ YK A K+
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.6 bits (109), Expect = 6e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176
P Y IIK P+D T+ +I YKS+ D L+ NA TYN P + +K A I
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y IK P+ ++ K+ EY+++ + D LM +NA YN P++ YK K+
Sbjct: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQ 477
Query: 178 HAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK-KSKKPSRE 222
M +K+ L +D + + +AK KSKK R+
Sbjct: 478 QV---MQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRK 520
Score = 33.1 bits (74), Expect = 0.67
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 177
P Y II PMD ++ I ++Y D KLM NA YN + Y A IL
Sbjct: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA-HIL 614
Query: 178 HAGFKMMSKQAALLGNED 195
K K+ L ++D
Sbjct: 615 EKLLKEKRKELGPLPDDD 632
>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
Length = 832
Score = 54.3 bits (129), Expect = 3e-07
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV APGY +I+ PMD TM +++ Y S F AD + + N YN P++
Sbjct: 748 FMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPES 807
Query: 168 VYYKLAKKILHAGFKMMSKQAALL 191
YYK A IL F K+A L+
Sbjct: 808 EYYKCA-NILEKFFFSKIKEAGLI 830
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 54.3 bits (129), Expect = 3e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV AP Y +IK PMD TM++++ Y+ +TEF AD + DN YN D+
Sbjct: 2809 FLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDS 2868
Query: 168 VYYKLAK 174
+Y+ A+
Sbjct: 2869 PFYQCAE 2875
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 54.3 bits (129), Expect = 3e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV AP Y +IK PMD TM++++ Y+ +TEF AD + DN YN D+
Sbjct: 2826 FLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDS 2885
Query: 168 VYYKLAK 174
+Y+ A+
Sbjct: 2886 PFYQCAE 2892
>gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]
Length = 1872
Score = 51.6 bits (122), Expect = 2e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV P Y +I +PMD T++ I ++Y+S F D L+ N++ YN P++
Sbjct: 1528 FHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPES 1587
Query: 168 VYYKLAKKILHAGFKMMSK 186
Y K A++I++ ++ +++
Sbjct: 1588 QYTKTAQEIVNVCYQTLTE 1606
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV + Y II PMD T+++ + Y S EF+ +L+ N+ TYN P
Sbjct: 1405 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1464
Query: 168 VYYKLAKKIL 177
++++ +L
Sbjct: 1465 SLTQISQSML 1474
>gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]
Length = 1893
Score = 51.6 bits (122), Expect = 2e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV P Y +I +PMD T++ I ++Y+S F D L+ N++ YN P++
Sbjct: 1549 FHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPES 1608
Query: 168 VYYKLAKKILHAGFKMMSK 186
Y K A++I++ ++ +++
Sbjct: 1609 QYTKTAQEIVNVCYQTLTE 1627
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 108 FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDT 167
F PV + Y II PMD T+++ + Y S EF+ +L+ N+ TYN P
Sbjct: 1426 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1485
Query: 168 VYYKLAKKIL 177
++++ +L
Sbjct: 1486 SLTQISQSML 1495
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 51.2 bits (121), Expect = 2e-06
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 31 MRKEGSERKRRSGSERGS----TVTRRERLTTLILGRRWRWSRPQIGQSERAGHSQPKMR 86
+R++ S RKR+ S+ GS T TR ++ R P S + KM+
Sbjct: 1436 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1495
Query: 87 AHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 146
+ + S+S R F + P Y +I+ P+DF +K++I ++Y+S+
Sbjct: 1496 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLN 1555
Query: 147 EFKADFKLMCDNAMTYNRPDTVYYK---LAKKILHAGFKMMSKQAALLGNEDTAVEEPVP 203
+ + D L+C NA T+N ++ Y+ + + + + + + K+ G E EE
Sbjct: 1556 DLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEE 1615
Query: 204 E-------VVPVQVETAKKSKKPSR 221
E V V+++ +K K R
Sbjct: 1616 EGSESESRSVKVKIKLGRKEKAQDR 1640
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 51.2 bits (121), Expect = 2e-06
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 31 MRKEGSERKRRSGSERGS----TVTRRERLTTLILGRRWRWSRPQIGQSERAGHSQPKMR 86
+R++ S RKR+ S+ GS T TR ++ R P S + KM+
Sbjct: 1371 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1430
Query: 87 AHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 146
+ + S+S R F + P Y +I+ P+DF +K++I ++Y+S+
Sbjct: 1431 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLN 1490
Query: 147 EFKADFKLMCDNAMTYNRPDTVYYK---LAKKILHAGFKMMSKQAALLGNEDTAVEEPVP 203
+ + D L+C NA T+N ++ Y+ + + + + + + K+ G E EE
Sbjct: 1491 DLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEE 1550
Query: 204 E-------VVPVQVETAKKSKKPSR 221
E V V+++ +K K R
Sbjct: 1551 EGSESESRSVKVKIKLGRKEKAQDR 1575
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 51.2 bits (121), Expect = 2e-06
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 31 MRKEGSERKRRSGSERGS----TVTRRERLTTLILGRRWRWSRPQIGQSERAGHSQPKMR 86
+R++ S RKR+ S+ GS T TR ++ R P S + KM+
Sbjct: 1374 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1433
Query: 87 AHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 146
+ + S+S R F + P Y +I+ P+DF +K++I ++Y+S+
Sbjct: 1434 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLN 1493
Query: 147 EFKADFKLMCDNAMTYNRPDTVYYK---LAKKILHAGFKMMSKQAALLGNEDTAVEEPVP 203
+ + D L+C NA T+N ++ Y+ + + + + + + K+ G E EE
Sbjct: 1494 DLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEE 1553
Query: 204 E-------VVPVQVETAKKSKKPSR 221
E V V+++ +K K R
Sbjct: 1554 EGSESESRSVKVKIKLGRKEKAQDR 1578
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 51.2 bits (121), Expect = 2e-06
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 31 MRKEGSERKRRSGSERGS----TVTRRERLTTLILGRRWRWSRPQIGQSERAGHSQPKMR 86
+R++ S RKR+ S+ GS T TR ++ R P S + KM+
Sbjct: 1404 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1463
Query: 87 AHLFSNSWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 146
+ + S+S R F + P Y +I+ P+DF +K++I ++Y+S+
Sbjct: 1464 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLN 1523
Query: 147 EFKADFKLMCDNAMTYNRPDTVYYK---LAKKILHAGFKMMSKQAALLGNEDTAVEEPVP 203
+ + D L+C NA T+N ++ Y+ + + + + + + K+ G E EE
Sbjct: 1524 DLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEE 1583
Query: 204 E-------VVPVQVETAKKSKKPSR 221
E V V+++ +K K R
Sbjct: 1584 EGSESESRSVKVKIKLGRKEKAQDR 1608
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,027,501
Number of Sequences: 37866
Number of extensions: 961910
Number of successful extensions: 3377
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2998
Number of HSP's gapped (non-prelim): 374
length of query: 544
length of database: 18,247,518
effective HSP length: 107
effective length of query: 437
effective length of database: 14,195,856
effective search space: 6203589072
effective search space used: 6203589072
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.