Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZDHHC11B Sequence: fasta or formatted (573aa) NCBI GI: 239753965
Description:

PREDICTED: zinc finger, DHHC-type containing 11B

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [360aa] PREDICTED: zinc finger, DHHC-type containing 11B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         36           1
 C cysteine            3.7         21           1
 D aspartate           3.8         22           1
 E glutamate           2.6         15           2
 F phenylalanine       4.4         25           3
 G glycine             6.6         38           2
 H histidine           3.3         19           2
 I isoleucine          3.8         22           2
 K lysine              4.0         23           2
 L leucine            11.7         67           3
 M methionine          2.3         13           1
 N asparagine          3.5         20           2
 P proline             7.3         42           2
 Q glutamine           5.4         31           2
 R arginine            4.4         25           1
 S serine              9.1         52           2
 T threonine           4.9         28           3
 V valine              8.4         48           2
 W tryptophan          2.1         12           1
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zinc finger, DHHC-type containing 11B [H... 
ZDHHC11B              0.605   PREDICTED: zinc finger, DHHC-type containing 11B is...
ZDHHC11               0.546   zinc finger, DHHC-type containing 11 
ZDHHC1                0.210   zinc finger, DHHC-type containing 1 
BRD9                  0.052   bromodomain containing 9 isoform 1 
BRD9                  0.052   bromodomain containing 9 isoform 2 
ZDHHC8                0.047   zinc finger, DHHC domain containing 8 
ZDHHC4                0.044   zinc finger, DHHC-type containing 4 
ZDHHC4                0.044   zinc finger, DHHC-type containing 4 
ZDHHC4                0.044   zinc finger, DHHC-type containing 4 
ZDHHC4                0.044   zinc finger, DHHC-type containing 4 
ZDHHC18               0.044   zinc finger, DHHC-type containing 18 
ZDHHC12               0.041   zinc finger, DHHC domain containing 12 
ZDHHC5                0.040   zinc finger, DHHC domain containing 5 
ZDHHC9                0.039   zinc finger, DHHC domain containing 9 
ZDHHC9                0.039   zinc finger, DHHC domain containing 9 
ZDHHC14               0.038   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC14               0.038   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC19               0.037   zinc finger, DHHC domain containing 19 
ZDHHC2                0.037   zinc finger, DHHC-type containing 2 
ZDHHC21               0.036   zinc finger, DHHC-type containing 21 
ZDHHC20               0.035   zinc finger, DHHC-type containing 20 
ZDHHC6                0.034   zinc finger, DHHC-type containing 6 
ZDHHC17               0.034   huntingtin interacting protein 14 
ZDHHC7                0.033   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC15               0.033   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.033   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC16               0.032   Abl-philin 2 isoform 1 
ZDHHC16               0.032   Abl-philin 2 isoform 1 
ZDHHC16               0.031   Abl-philin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press