Search of human proteins with 240849329

Search of human proteins with 240849329

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|240849329 hypothetical protein LOC728392 [Homo sapiens]
         (119 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|240849329 hypothetical protein LOC728392 [Homo sapiens]            252   5e-68
gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]            41   2e-04
gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo ...    41   2e-04
gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo ...    41   2e-04
gi|4758392 forkhead box D1 [Homo sapiens]                              40   5e-04
gi|7657540 schwannomin interacting protein 1 [Homo sapiens]            39   0.001
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo...    37   0.003
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    37   0.005
gi|156104872 Ets2 repressor factor [Homo sapiens]                      37   0.005
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    36   0.006
gi|236459851 ubinuclein 2 [Homo sapiens]                               36   0.008
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ...    36   0.008
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]            36   0.008
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ...    36   0.008
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       36   0.008
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    36   0.008
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    36   0.008
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    36   0.008
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    36   0.008
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]        36   0.008
gi|57242766 hypothetical protein LOC168455 [Homo sapiens]              36   0.008
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre...    36   0.008
gi|171543895 ataxin 2 [Homo sapiens]                                   35   0.010
gi|18860857 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860855 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860851 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860849 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860853 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860839 menin isoform 1 [Homo sapiens]                             35   0.013
gi|18860847 menin isoform 2 [Homo sapiens]                             35   0.013

>gi|240849329 hypothetical protein LOC728392 [Homo sapiens]
          Length = 119

 Score =  252 bits (643), Expect = 5e-68
 Identities = 119/119 (100%), Positives = 119/119 (100%)

Query: 1   MADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG 60
           MADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG
Sbjct: 1   MADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG 60

Query: 61  GRAGQPPKAASRPPPKKEAPPLDEGCYLDHFPHLSIFIYAAIAFSITSCIFTYIHLQLA 119
           GRAGQPPKAASRPPPKKEAPPLDEGCYLDHFPHLSIFIYAAIAFSITSCIFTYIHLQLA
Sbjct: 61  GRAGQPPKAASRPPPKKEAPPLDEGCYLDHFPHLSIFIYAAIAFSITSCIFTYIHLQLA 119


>gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 2   ADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGG 61
           ++G  RRR  G E  R   E+     +PP + P A      AS AG +A RR  GR +G 
Sbjct: 119 SEGPHRRRKPGAESPRRAIEAGA---RPPRQRPGAGTAAARASRAGPRASRRGRGRGRGL 175

Query: 62  RAGQPPKAA 70
           +A +PP  A
Sbjct: 176 QAARPPLLA 184


>gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo
           sapiens]
          Length = 219

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 2   ADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGG 61
           ++G  RRR  G E  R   E+     +PP + P A      AS AG +A RR  GR +G 
Sbjct: 119 SEGPHRRRKPGAESPRRAIEAGA---RPPRQRPGAGTAAARASRAGPRASRRGRGRGRGL 175

Query: 62  RAGQPPKAA 70
           +A +PP  A
Sbjct: 176 QAARPPLLA 184


>gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo
           sapiens]
          Length = 219

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 2   ADGLFRRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGG 61
           ++G  RRR  G E  R   E+     +PP + P A      AS AG +A RR  GR +G 
Sbjct: 119 SEGPHRRRKPGAESPRRAIEAGA---RPPRQRPGAGTAAARASRAGPRASRRGRGRGRGL 175

Query: 62  RAGQPPKAA 70
           +A +PP  A
Sbjct: 176 QAARPPLLA 184


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 7   RRRPWG----LEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGR 62
           RRR +     LE +  + + + +   PP    PA  GP  A+ AG   G   GG   GG 
Sbjct: 55  RRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGS 114

Query: 63  AGQPPKAASRPPP 75
           AG   K     PP
Sbjct: 115 AGSGAKNPLVKPP 127



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 26/74 (35%), Positives = 28/74 (37%), Gaps = 20/74 (27%)

Query: 19  DPESEGLFD-----------KPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPP 67
           DPES  +FD           K  P  PP A    S    G  A   AGG      AG P 
Sbjct: 202 DPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGA---AGG------AGDPA 252

Query: 68  KAASRPPPKKEAPP 81
            AA+  PP    PP
Sbjct: 253 AAAALFPPAPPPPP 266


>gi|7657540 schwannomin interacting protein 1 [Homo sapiens]
          Length = 487

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 18  PDPESEGLFDKPPPED------------PPAARGPRSASAAGKKAGRRAGGR--AQGGRA 63
           P P   G   +  P+D            P  +RGPR A    + AG R  GR  A GG  
Sbjct: 144 PPPVPNGNLHQHDPQDLRHNGNVVVAGRPSCSRGPRRAIQKPQPAGGRRSGRGPAAGGLC 203

Query: 64  GQPPKAASRPPPKKEAPPLD 83
            QPP   +  P +   PP+D
Sbjct: 204 LQPPDGGTCVPEEPPVPPMD 223


>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
           sapiens]
          Length = 1158

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 13  LEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAG-------RRAGGRAQGGRAGQ 65
           L ++ P+P  + +   PPPE  P  R  ++    GK+ G        +   + + G+  +
Sbjct: 42  LSELEPEPREDDVEAPPPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDKGKKGKKDK 101

Query: 66  PPK-------AASRPPPK-KEAPP 81
            PK        + RPP K KE PP
Sbjct: 102 GPKVPKESLEGSPRPPKKGKEKPP 125



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 18  PDPESEGLFDKPPP-----EDPP-AARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAAS 71
           P    E L   P P     E PP A + P+       K  +    +A      +PPKA  
Sbjct: 103 PKVPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPKATK 162

Query: 72  RPPPKKEAPPL 82
           +PP  K  P L
Sbjct: 163 KPPSGKRPPIL 173


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 36.6 bits (83), Expect = 0.005
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 18/113 (15%)

Query: 12  GLEQIRPDPESEGLFDKPPPEDPPAAR-----GPRSASAAGKKAGRR------AGGRAQG 60
           G+ Q  P+  + G+  K  PEDP AA      G  + ++ G+ AGRR         R QG
Sbjct: 475 GVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASRGRVAGRRRWEPRLGEKRGQG 534

Query: 61  GRAGQPPKAASRPPPKKEAPPLDEGCYL-------DHFPHLSIFIYAAIAFSI 106
           G   +P        P  +AP +  G          +    LS+F++ +  FSI
Sbjct: 535 GEGRRPSGGFGTENPLSQAPSVFPGPRYTPGDGKRNVHTVLSVFVFISFIFSI 587


>gi|156104872 Ets2 repressor factor [Homo sapiens]
          Length = 548

 Score = 36.6 bits (83), Expect = 0.005
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 32  EDPPAARGPRSAS----AAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPPLDEG 85
           + PP  R  R+A     A   K+G  AGG A+G  A  PP     PPP+ +  P+ EG
Sbjct: 380 QPPPLGRRQRAAGEKAVAGADKSGGSAGGLAEGAGALAPPP----PPPQIKVEPISEG 433


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 15/98 (15%)

Query: 8   RRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGR--RAGGRAQG----- 60
           RRP G  Q +  P   G    PPP+    ++GP      GK  GR  + G ++QG     
Sbjct: 39  RRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGP--PPPPGKPEGRPPQGGNQSQGPPPHP 96

Query: 61  GRAGQPP------KAASRPPPKKEAPPLDEGCYLDHFP 92
           G+  +PP         + PPP K   P  +G    H P
Sbjct: 97  GKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRP 134



 Score = 35.0 bits (79), Expect = 0.013
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 7   RRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG-----G 61
           R  P G  Q +  P   G  ++PPP+    +  P       ++   + G ++QG     G
Sbjct: 101 RPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPG 160

Query: 62  RAGQPP-------KAASRPPPKKEAPPLDEG 85
           +   PP       ++A  PP K + PP  EG
Sbjct: 161 KPEGPPPQEGNKSRSARSPPGKPQGPPQQEG 191



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 7   RRRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG----GR 62
           R  P G  Q +  P   G  + PPP++   +R  RS     +   ++ G + QG    G+
Sbjct: 143 RPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGK 202

Query: 63  AGQPPKAASRPPPKKEAPP 81
              PP A    P + +APP
Sbjct: 203 PQGPPPAGGN-PQQPQAPP 220



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 46 AGKKAGRRAGGRAQGGRAGQPPKAASRPPP----KKEAPPLDEG 85
          +GK  GRR  G  Q  R   PP     PPP    + + PP   G
Sbjct: 33 SGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPG 76



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 8   RRPWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPP 67
           R P G  Q  P  E       PPP  P   +GP  A    ++      G+ QG     PP
Sbjct: 177 RSPPGKPQGPPQQEGNKPQGPPPPGKP---QGPPPAGGNPQQPQAPPAGKPQGP---PPP 230

Query: 68  KAASRPP 74
               RPP
Sbjct: 231 PQGGRPP 237


>gi|236459851 ubinuclein 2 [Homo sapiens]
          Length = 1347

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 13/76 (17%)

Query: 18 PDPESEGLFDKPPPE------------DPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQ 65
          P PE E  + + PP             +PPA R P   S A   +  +   + +  RA +
Sbjct: 23 PGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAPRSDAQPPSREKPLPQREVSRA-E 81

Query: 66 PPKAASRPPPKKEAPP 81
          PP +  R PP+ E PP
Sbjct: 82 PPMSLQREPPRPEPPP 97


>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
           sapiens]
          Length = 585

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 18  PDPESEGLFDKPPP----EDPPAAR-GPRSASAAGKKAGRRAGGRAQGGRA 63
           P P   G   +PP     +DPPA+  G   A A   +AGRRAGG A G R+
Sbjct: 453 PGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARS 503



 Score = 26.9 bits (58), Expect = 3.6
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%)

Query: 30  PPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPPLDEGCYLD 89
           P  +P +  GP S   A         GR +G  A +P   A  PP ++  PP    C L 
Sbjct: 325 PAAEPVSQAGPPSPGHA---------GRPRGPEAARP--CARGPPSQEPGPPRPWPCALR 373

Query: 90  HFPHLSIFIYAAIAFS 105
             P L   + +   FS
Sbjct: 374 PRPRLRAALPSRRLFS 389


>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 381

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 28  KPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRP--PPKKEAPPLDEG 85
           + PP  PPAAR P  A+A    + RRAG         +P ++A+RP  P + E   ++ G
Sbjct: 313 RAPPRPPPAARRPPPATA---PSPRRAGSPPTREEEPRPRRSAARPQCPVQCECLLMETG 369

Query: 86  CY 87
           C+
Sbjct: 370 CF 371



 Score = 26.6 bits (57), Expect = 4.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 40  PRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPP 81
           P++  AA      +   R++G      P+A  RPPP    PP
Sbjct: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPP 326


>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
           sapiens]
          Length = 585

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 18  PDPESEGLFDKPPP----EDPPAAR-GPRSASAAGKKAGRRAGGRAQGGRA 63
           P P   G   +PP     +DPPA+  G   A A   +AGRRAGG A G R+
Sbjct: 453 PGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARS 503



 Score = 26.9 bits (58), Expect = 3.6
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%)

Query: 30  PPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPPLDEGCYLD 89
           P  +P +  GP S   A         GR +G  A +P   A  PP ++  PP    C L 
Sbjct: 325 PAAEPVSQAGPPSPGHA---------GRPRGPEAARP--CARGPPSQEPGPPRPWPCALR 373

Query: 90  HFPHLSIFIYAAIAFS 105
             P L   + +   FS
Sbjct: 374 PRPRLRAALPSRRLFS 389


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 31  PEDPPAARGPRSASAAGKKAGRRAGGRAQ---GGRAGQPPKAASRPPPKKEAPP 81
           P  P    GP    A+   AG   GGR      GRA +PP   SRP P   APP
Sbjct: 62  PRSPAPREGPPPVLAS--PAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPP 113



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 17  RPDPESEGLFDKPPPEDPPAA--RGPRSASAAGKKAGRRAGGRAQGGR 62
           RP P+       PPP  PP+A  RG R+A A G  +  RA G A+G R
Sbjct: 97  RPPPQPSR--PAPPPPAPPSALPRGGRAARAGGPGSRARAAG-ARGCR 141


>gi|209954781 neurotrophic factor artemin isoform 1 precursor
          [Homo sapiens]
          Length = 220

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 31 PEDPPAARGPRSASAAGKKAGRRAGGRAQ---GGRAGQPPKAASRPPPKKEAPP 81
          P  P    GP    A+   AG   GGR      GRA +PP   SRP P   APP
Sbjct: 45 PRSPAPREGPPPVLAS--PAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPP 96



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 17  RPDPESEGLFDKPPPEDPPAA--RGPRSASAAGKKAGRRAGGRAQGGR 62
           RP P+       PPP  PP+A  RG R+A A G  +  RA G A+G R
Sbjct: 80  RPPPQPSR--PAPPPPAPPSALPRGGRAARAGGPGSRARAAG-ARGCR 124


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 31  PEDPPAARGPRSASAAGKKAGRRAGGRAQ---GGRAGQPPKAASRPPPKKEAPP 81
           P  P    GP    A+   AG   GGR      GRA +PP   SRP P   APP
Sbjct: 53  PRSPAPREGPPPVLAS--PAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPP 104



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 17  RPDPESEGLFDKPPPEDPPAA--RGPRSASAAGKKAGRRAGGRAQGGR 62
           RP P+       PPP  PP+A  RG R+A A G  +  RA G A+G R
Sbjct: 88  RPPPQPSR--PAPPPPAPPSALPRGGRAARAGGPGSRARAAG-ARGCR 132


>gi|209954776 neurotrophic factor artemin isoform 1 precursor
          [Homo sapiens]
          Length = 220

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 31 PEDPPAARGPRSASAAGKKAGRRAGGRAQ---GGRAGQPPKAASRPPPKKEAPP 81
          P  P    GP    A+   AG   GGR      GRA +PP   SRP P   APP
Sbjct: 45 PRSPAPREGPPPVLAS--PAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPP 96



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 17  RPDPESEGLFDKPPPEDPPAA--RGPRSASAAGKKAGRRAGGRAQGGR 62
           RP P+       PPP  PP+A  RG R+A A G  +  RA G A+G R
Sbjct: 80  RPPPQPSR--PAPPPPAPPSALPRGGRAARAGGPGSRARAAG-ARGCR 124


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 31  PEDPPAARGPRSASAAGKKAGRRAGGRAQ---GGRAGQPPKAASRPPPKKEAPP 81
           P  P    GP    A+   AG   GGR      GRA +PP   SRP P   APP
Sbjct: 53  PRSPAPREGPPPVLAS--PAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPP 104



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 17  RPDPESEGLFDKPPPEDPPAA--RGPRSASAAGKKAGRRAGGRAQGGR 62
           RP P+       PPP  PP+A  RG R+A A G  +  RA G A+G R
Sbjct: 88  RPPPQPSR--PAPPPPAPPSALPRGGRAARAGGPGSRARAAG-ARGCR 132


>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
          Length = 1604

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 31   PEDPPAARGPRSASAAGKKAGRRA-GGRAQGGRAGQPPKAASRPPP---------KKEAP 80
            P  PP   GP   SA G K  R A G R   G  GQP       PP          KE P
Sbjct: 1295 PPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGP 1354

Query: 81   PLDEGCY 87
            P  +G Y
Sbjct: 1355 PGKQGFY 1361



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 20   PESEGLFDKPPPEDPPAARGPRSASAAGKKAG--RRAGGRAQGGRAGQPPKAASRPPPKK 77
            P SEGL   P P  P   RGP+  S      G   + G     G  G P K  S  PP  
Sbjct: 1122 PGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGP 1181

Query: 78   EAPPLDEG 85
            +A    EG
Sbjct: 1182 QAEKGSEG 1189



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 18  PDPESEGLFDKP-PPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPK 76
           P P   GL   P  P  PP  +G + +S    K G        GG+ G+P     +  P 
Sbjct: 455 PGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEG-------PGGKPGKPGVKGEKGDPC 507

Query: 77  KEAPPLDEG 85
           +  P L EG
Sbjct: 508 EVCPTLPEG 516



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 20   PESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQG--GRAGQPPKAASRPPPKK 77
            P  +G +  P P+  P A G +  +    +AG   G    G  G  G P  A  R  P  
Sbjct: 1355 PGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGA 1414

Query: 78   EAP 80
              P
Sbjct: 1415 PGP 1417



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 24   GLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQP 66
            GL   P P  PP  +GP        K G + G R   G AG P
Sbjct: 1195 GLPGSPGPPGPPGIQGPAGLDGLDGKDG-KPGLRGDPGPAGPP 1236



 Score = 26.6 bits (57), Expect = 4.7
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 10   PWGLEQIRPDPESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKA 69
            P GL+ +       GL   P P  PP   GP          G   G +   G+ G PP +
Sbjct: 1211 PAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPG-LPGPKGDCGKPG-PPGS 1268

Query: 70   ASRPPPKKE 78
              RP  + E
Sbjct: 1269 TGRPGAEGE 1277


>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
          Length = 235

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 29  PPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPPLDEGC 86
           P P  PP ARG ++     + A RR   R +G RA    +   RPPP    PP +E C
Sbjct: 109 PDPPGPPTARG-QARRPVPRAAARR---RRRGARAAAARRRKPRPPPPPPPPP-EESC 161


>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
           preproprotein [Homo sapiens]
          Length = 178

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 18  PDPESEGLFDKPPPEDPPAARGPRSASAAGKKA--GRRAGGRAQGGRAGQPP-------K 68
           P P+       PPP   P    P+   +   ++  G+  G   QGG+   PP       +
Sbjct: 60  PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQ 119

Query: 69  AASRPPPKKEAPPLDEG 85
           +A  PP K + PP  EG
Sbjct: 120 SARSPPGKPQGPPQQEG 136



 Score = 32.3 bits (72), Expect = 0.085
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query: 31  PEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKEAPP 81
           P+ PPA  G +S SA       +   + +G     PP  A   P + +APP
Sbjct: 107 PQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 157



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 20  PESEGLFDKPPPEDPPAARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKK-- 77
           P  +G   + P   P   +GP      GK  G  A G ++   A  PP     PP ++  
Sbjct: 80  PPPQGDKSRSPRSPPGKPQGP--PPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN 137

Query: 78  --EAPPLDEG 85
             + PP   G
Sbjct: 138 NPQGPPPPAG 147


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 36 AARGP--RSASAAGKKAGRRAGGRAQGG--RAGQPPKAASRPPPKKEAPPLDEGCY 87
          AAR P  RS     +++GR  GG A G    A  PP     PP ++ +PP    C+
Sbjct: 22 AARWPGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCF 77



 Score = 29.3 bits (64), Expect = 0.72
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)

Query: 31 PEDPPAARGPRSASAAGKKAGR------RAGGRAQGGRAGQPPKAASRPPPKKEAPP 81
          P  P  A   R  +AA     R      R  GR  GG A  P  +A+ PPP    PP
Sbjct: 8  PRSPAVATESRRFAAARWPGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGPGPPP 64


>gi|18860857 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860855 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860851 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860849 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860853 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860839 menin isoform 1 [Homo sapiens]
          Length = 615

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 467 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 526

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 527 VAGTARGPEGGSTAQVPAPAASPPPE 552


>gi|18860847 menin isoform 2 [Homo sapiens]
          Length = 610

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 2   ADGLFRRRPWGLEQI---RPDPESEGLFDKPPPEDPPA-----ARGPRSASAAGKKAGRR 53
           A+      PWG E     R  P  E   ++PPP   PA       G  + S   +K    
Sbjct: 462 AEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGT 521

Query: 54  AGGRA---QGGRAGQPPKAASRPPPK 76
             G A   +GG   Q P  A+ PPP+
Sbjct: 522 VAGTARGPEGGSTAQVPAPAASPPPE 547


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.139    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,885,464
Number of Sequences: 37866
Number of extensions: 417264
Number of successful extensions: 7329
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 701
Number of HSP's that attempted gapping in prelim test: 4900
Number of HSP's gapped (non-prelim): 2744
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.