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Search of human proteins with 239758164
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758164 PREDICTED: similar to protein phosphatase 2A 48
kDa regulatory subunit [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa... 616 e-177
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 207 9e-54
gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha... 151 7e-37
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha... 151 7e-37
gi|7706469 Kruppel-like factor [Homo sapiens] 44 2e-04
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 36 0.035
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 35 0.077
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 34 0.13
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 34 0.13
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens] 34 0.13
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 34 0.17
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 32 0.50
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 32 0.50
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s... 32 0.65
gi|239754468 PREDICTED: hypothetical protein [Homo sapiens] 32 0.65
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 32 0.65
gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo ... 32 0.65
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 32 0.65
gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo ... 32 0.65
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 32 0.65
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 32 0.65
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 32 0.65
gi|122937211 KIAA0368 protein [Homo sapiens] 32 0.65
gi|224593756 hypothetical protein LOC164127 [Homo sapiens] 32 0.85
gi|169184020 PREDICTED: hypothetical protein [Homo sapiens] 32 0.85
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 32 0.85
gi|169179745 PREDICTED: hypothetical protein [Homo sapiens] 32 0.85
gi|169164936 PREDICTED: family with sequence similarity 132, mem... 32 0.85
>gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa
regulatory subunit [Homo sapiens]
Length = 290
Score = 616 bits (1588), Expect = e-177
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MVFTVPVADPESCAGAVQRCSLPSGSARWSESHVEFADARTGRAERAVSFCSRGSLGGVG 60
MVFTVPVADPESCAGAVQRCSLPSGSARWSESHVEFADARTGRAERAVSFCSRGSLGGVG
Sbjct: 1 MVFTVPVADPESCAGAVQRCSLPSGSARWSESHVEFADARTGRAERAVSFCSRGSLGGVG 60
Query: 61 QARGTQQERRRPGPADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRK 120
QARGTQQERRRPGPADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRK
Sbjct: 61 QARGTQQERRRPGPADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRK 120
Query: 121 ILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
ILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV
Sbjct: 121 ILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
Query: 181 GPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRG 240
GPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRG
Sbjct: 181 GPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRG 240
Query: 241 LGRRLPQGPSLCPRLCPGGPVRLRPRARPSPGSRSPCGARLLGVSAHPPH 290
LGRRLPQGPSLCPRLCPGGPVRLRPRARPSPGSRSPCGARLLGVSAHPPH
Sbjct: 241 LGRRLPQGPSLCPRLCPGGPVRLRPRARPSPGSRSPCGARLLGVSAHPPH 290
>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
isoform 1 [Homo sapiens]
Length = 575
Score = 207 bits (527), Expect = 9e-54
Identities = 95/96 (98%), Positives = 96/96 (100%)
Query: 85 QACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYL 144
+ACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYL
Sbjct: 170 KACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYL 229
Query: 145 VQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
VQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV
Sbjct: 230 VQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 265
>gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha
isoform 2 [Homo sapiens]
Length = 529
Score = 151 bits (381), Expect = 7e-37
Identities = 67/106 (63%), Positives = 82/106 (77%)
Query: 75 ADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVH 134
AD + + + CGCPLYWK P+F AGGE+TG V+ F+AMWRK+L N HDDA+KF+
Sbjct: 123 ADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFIC 182
Query: 135 LLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
LL P C+ L QEDF+P LQDVV+THPGL+FLK+A EFHSRYITTV
Sbjct: 183 LLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTV 228
>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
isoform 1 [Homo sapiens]
Length = 1150
Score = 151 bits (381), Expect = 7e-37
Identities = 67/106 (63%), Positives = 82/106 (77%)
Query: 75 ADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVH 134
AD + + + CGCPLYWK P+F AGGE+TG V+ F+AMWRK+L N HDDA+KF+
Sbjct: 744 ADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFIC 803
Query: 135 LLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
LL P C+ L QEDF+P LQDVV+THPGL+FLK+A EFHSRYITTV
Sbjct: 804 LLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTV 849
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 43.9 bits (102), Expect = 2e-04
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
Query: 180 VGPQRRGRWFQRG-ARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAF 238
+GP GR+ R+ +PP GG G G R PR + G PG
Sbjct: 104 LGPALHGRFLLAPPGRLVKAEPPEA---DGGGGYGCAPGLTRGPRGLKREGAPGPAASCM 160
Query: 239 RGLGRRLPQGPSLCPRLCPGGPVRLRPRARPSPGSRS 275
RG G R P P P L P GP RL P+PG R+
Sbjct: 161 RGPGGRPPPPPD-TPPLSPDGPARL-----PAPGPRA 191
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 36.2 bits (82), Expect = 0.035
Identities = 41/121 (33%), Positives = 47/121 (38%), Gaps = 32/121 (26%)
Query: 179 TVGPQRRGRWFQRGARVFLQQPPRGFCGRGGRG------PGFLSFRRRRPRSGRLRGVPG 232
TVGP RW G + + PR G R P S R RP S G PG
Sbjct: 91 TVGP----RWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSRARSRPESSP--GAPG 144
Query: 233 QTLPAFRGLGRRLPQGPSLC--------PRLCPGGPVRLR------PRARPSPGSRSPCG 278
++PA LP P L PRL P P L PRA P+ GSR P G
Sbjct: 145 SSVPAL------LPSLPPLAAPRPLSARPRLRPPQPQPLALTVGNGPRAPPAGGSRQPRG 198
Query: 279 A 279
+
Sbjct: 199 S 199
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 35.0 bits (79), Expect = 0.077
Identities = 31/87 (35%), Positives = 33/87 (37%), Gaps = 16/87 (18%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRL------------PQGPSLCPRLCPGGPV---R 262
RRRR R R RG F GLG R P G + PR P P R
Sbjct: 216 RRRRLRRRRRRGERAAAAAEF-GLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSR 274
Query: 263 LRPRARPSPGSRSPCGARLLGVSAHPP 289
PR RP P S +P L G A P
Sbjct: 275 APPRPRPHPASPAPGDGALRGAEATAP 301
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 35.0 bits (79), Expect = 0.077
Identities = 31/87 (35%), Positives = 33/87 (37%), Gaps = 16/87 (18%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRL------------PQGPSLCPRLCPGGPV---R 262
RRRR R R RG F GLG R P G + PR P P R
Sbjct: 216 RRRRLRRRRRRGERAAAAAEF-GLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSR 274
Query: 263 LRPRARPSPGSRSPCGARLLGVSAHPP 289
PR RP P S +P L G A P
Sbjct: 275 APPRPRPHPASPAPGDGALRGAEATAP 301
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 35.0 bits (79), Expect = 0.077
Identities = 31/87 (35%), Positives = 33/87 (37%), Gaps = 16/87 (18%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRL------------PQGPSLCPRLCPGGPV---R 262
RRRR R R RG F GLG R P G + PR P P R
Sbjct: 216 RRRRLRRRRRRGERAAAAAEF-GLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSR 274
Query: 263 LRPRARPSPGSRSPCGARLLGVSAHPP 289
PR RP P S +P L G A P
Sbjct: 275 APPRPRPHPASPAPGDGALRGAEATAP 301
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
[Homo sapiens]
Length = 336
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 177 ITTVGPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGV------ 230
++T R GR +R AR L+ PPR PG RRRP + R R V
Sbjct: 50 LSTAPGAREGRSARRAARGNLEPPPRASRPARPLRPGLQQRLRRRPGAPRPRDVRSIFEQ 109
Query: 231 -PGQTLPAFRGLGR-----RLPQGPSLC 252
+PA RG G LP GP C
Sbjct: 110 PQDPRVPAERGEGHCFAELVLPGGPGWC 137
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
[Homo sapiens]
Length = 418
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 177 ITTVGPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGV------ 230
++T R GR +R AR L+ PPR PG RRRP + R R V
Sbjct: 50 LSTAPGAREGRSARRAARGNLEPPPRASRPARPLRPGLQQRLRRRPGAPRPRDVRSIFEQ 109
Query: 231 -PGQTLPAFRGLGR-----RLPQGPSLC 252
+PA RG G LP GP C
Sbjct: 110 PQDPRVPAERGEGHCFAELVLPGGPGWC 137
>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
Length = 485
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 199 QPPRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPG 258
Q P C + GRG + R RPR R P PA RR+P+ P+LC L
Sbjct: 383 QAPPCLCRKRGRG-ACIKCERLRPRIRRRGLGPPAAAPA----RRRIPRTPALCTPLALP 437
Query: 259 GPVRLRPRARPSPGSRSPCGARLLGVSAHPP 289
P R R SP +R R PP
Sbjct: 438 APT---TRRRQSPWTRFQWRRRAWAAPLWPP 465
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 33.9 bits (76), Expect = 0.17
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 182 PQRRGRWFQRGARVFLQQP--PRGFCGRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFR 239
PQ R + QRG P PRG C GR L RR R R P LPA R
Sbjct: 110 PQGRAQRPQRGGVDLPATPGGPRGQCA--GRSGDVL----RRAGRRRARPPPVPRLPAPR 163
Query: 240 GLGRRLPQGPSLCPRLCPGGPVRLRPRARPSPGSRSPCGARL 281
R P+GP+ P G P R +PG R C A+L
Sbjct: 164 A--PRRPRGPATPDPSPPAGRPH-GPAGRAAPGRRPGCTAQL 202
>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
sapiens]
Length = 609
Score = 32.3 bits (72), Expect = 0.50
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 217 FRRRRPRSGRLRGVPGQTLPAFRGLGRR-----------LPQGPSLCPRLCPGGPVRL-- 263
F R++ GR G+P +T+P G R LPQGP++ P PG L
Sbjct: 178 FPRKQCSQGR-PGLPTRTMPRDTGQPTRTMLWDTGQPCVLPQGPAVTPPAFPGVQETLPS 236
Query: 264 RPRARPSPGSR---SPCGARLLGVSAHPPH 290
P A +PG R SP R+ G PH
Sbjct: 237 LPVAPGAPGQRGRPSPYSLRVRGPRQDLPH 266
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 32.3 bits (72), Expect = 0.50
Identities = 30/91 (32%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 206 GRGGRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGP-------SLCPRLCPG 258
GRGGR G RRRR R R R + P RG R P P S
Sbjct: 374 GRGGRAAGGAG-RRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDS 432
Query: 259 GPVRLRPRARPSPGSRSPCGARLLGVSAHPP 289
G R P P PGS G PP
Sbjct: 433 GSGRGAPGPGPEPGSERGHGGHGKRAKERPP 463
>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
sapiens]
Length = 234
Score = 32.0 bits (71), Expect = 0.65
Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
Query: 206 GRGGRG-PGFLSFR-----RRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPGG 259
GR G G PG R RRRPR+ R R P R RR + P CPR
Sbjct: 2 GRAGAGSPGRRRQRCQSRGRRRPRAPRRRKAPA----CRRRRARRRRKKP--CPR----- 50
Query: 260 PVRLRPRARPSPGSRSPCGAR 280
LRP P S+ PC +R
Sbjct: 51 --SLRPEIHECPKSQDPCASR 69
>gi|239754468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 32.0 bits (71), Expect = 0.65
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPG-GPVRL------RPRARPS 270
RRR S R PG R G P+GP PR P GP RL RARPS
Sbjct: 36 RRRGSCSSRRLSGPG------RRAGAPTPRGPPPRPRSFPETGPARLGAAAGPSSRARPS 89
Query: 271 PGSRSPCGARLLGV 284
G R A+L G+
Sbjct: 90 RGERPWLAAQLRGL 103
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 32.0 bits (71), Expect = 0.65
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRG-----------LGRRLPQG--PSLCPRLCPGGPVRLR 264
RRR PR G+P P R RLP+G P+ L G RLR
Sbjct: 131 RRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLR 190
Query: 265 PRARPSPGSRSPCGARLLGVSAH 287
P P SP A+ GV H
Sbjct: 191 PLLLQPPPMLSPGLAQSPGVELH 213
>gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo
sapiens]
Length = 159
Score = 32.0 bits (71), Expect = 0.65
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPG-GPVRL------RPRARPS 270
RRR S R PG R G P+GP PR P GP RL RARPS
Sbjct: 49 RRRGSCSSRRLSGPG------RRAGAPTPRGPPPRPRSFPETGPARLGAAAGPSSRARPS 102
Query: 271 PGSRSPCGARLLGV 284
G R A+L G+
Sbjct: 103 RGERPWLAAQLRGL 116
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 32.0 bits (71), Expect = 0.65
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRG-----------LGRRLPQG--PSLCPRLCPGGPVRLR 264
RRR PR G+P P R RLP+G P+ L G RLR
Sbjct: 131 RRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLR 190
Query: 265 PRARPSPGSRSPCGARLLGVSAH 287
P P SP A+ GV H
Sbjct: 191 PLLLQPPPMLSPGLAQSPGVELH 213
>gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo
sapiens]
Length = 159
Score = 32.0 bits (71), Expect = 0.65
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPG-GPVRL------RPRARPS 270
RRR S R PG R G P+GP PR P GP RL RARPS
Sbjct: 49 RRRGSCSSRRLSGPG------RRAGAPTPRGPPPRPRSFPETGPARLGAAAGPSSRARPS 102
Query: 271 PGSRSPCGARLLGV 284
G R A+L G+
Sbjct: 103 RGERPWLAAQLRGL 116
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 32.0 bits (71), Expect = 0.65
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 215 LSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQG--PSLCPRLCPGGPVRLRPRARPSPG 272
L+ R P + + +P P GL R P G P CPR GP L P P+P
Sbjct: 85 LAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPA 144
Query: 273 SRSPCG 278
P G
Sbjct: 145 RTGPAG 150
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 32.0 bits (71), Expect = 0.65
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 218 RRRRPRSGRLRGVPGQTLPAFRG-----------LGRRLPQG--PSLCPRLCPGGPVRLR 264
RRR PR G+P P R RLP+G P+ L G RLR
Sbjct: 131 RRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLR 190
Query: 265 PRARPSPGSRSPCGARLLGVSAH 287
P P SP A+ GV H
Sbjct: 191 PLLLQPPPMLSPGLAQSPGVELH 213
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 32.0 bits (71), Expect = 0.65
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 210 RGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGPSLCPRLCPGGPVRLRPRARP 269
R PG + +P SG L V L G R P P+L + P PVRL P P
Sbjct: 1065 RPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSR--PPTPTLSLKPTPPAPVRLSP--AP 1120
Query: 270 SPGSRS 275
PGS S
Sbjct: 1121 PPGSSS 1126
>gi|122937211 KIAA0368 protein [Homo sapiens]
Length = 2017
Score = 32.0 bits (71), Expect = 0.65
Identities = 43/138 (31%), Positives = 46/138 (33%), Gaps = 47/138 (34%)
Query: 198 QQPPR------GFCGRGGRGPGFLSFRRRRPR--------SGRLR--------------- 228
Q PP G CG G R PG R R R S RLR
Sbjct: 34 QPPPHQNWAVGGRCGAGAR-PGLSQRRGREVRREAQGGASSRRLRARLYFSESTSLPLDR 92
Query: 229 -GVPGQTLPAFRGLGRRLPQGPS-------------LCPRLCPGGPVRLRPRARPSPGSR 274
G PG PA GL R P+GP+ R G +RLR ARP
Sbjct: 93 RGSPGPLGPAPHGLRRAAPRGPARRTPRSTALTSRRRAQRPRHGDRLRLRSEARPRAAGD 152
Query: 275 SPC---GARLLGVSAHPP 289
PC GA G PP
Sbjct: 153 WPCARGGAVRPGRPHRPP 170
>gi|224593756 hypothetical protein LOC164127 [Homo sapiens]
Length = 623
Score = 31.6 bits (70), Expect = 0.85
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 23/87 (26%)
Query: 196 FLQQPPRGFCGRGGRGPGFLS---------FRRRRPRSGRLRGVPGQT----LPAFRGLG 242
F +P R C RG LS R+ RPRS RL G+T PA++
Sbjct: 66 FTPRPRRRGCSDSLRGSRSLSDVARRPLERSRKHRPRSRRLEDAWGETGTKPRPAWQPQT 125
Query: 243 RRLPQGPSLCPRL----------CPGG 259
+ PQ P CP CPGG
Sbjct: 126 QLPPQRPQPCPHYPLAQGDSPPPCPGG 152
>gi|169184020 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 31.6 bits (70), Expect = 0.85
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 209 GRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGP--SLCPRLC-----PGGPV 261
GRG GF R R R + QT P Q P S P++C PG P
Sbjct: 45 GRGVGFKRIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPT 104
Query: 262 RLRPRARPSPGSRSPCGA 279
R + P PG++ P G+
Sbjct: 105 RSCIQQEPPPGNKLPAGS 122
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 31.6 bits (70), Expect = 0.85
Identities = 42/124 (33%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 163 LSFLK-EASEFHSRYITTVGPQRRGRWFQRGARVFLQQPPRGFCGRGGRGPGFLSFRRRR 221
LSFL + S + GP R+ QR +V PPR GRG + P S R R
Sbjct: 89 LSFLSFSLLPWASSVLPDSGPPRQ----QRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGR 144
Query: 222 PRSGRLRGVPGQTLPA---FRGLGRR------LPQGPSLCPRLCPGGPVRLRPRARPSPG 272
+ GRL + PA G GRR +G S PR P LRP A P G
Sbjct: 145 GQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSA-PRGG 203
Query: 273 SRSP 276
P
Sbjct: 204 KGGP 207
>gi|169179745 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 31.6 bits (70), Expect = 0.85
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 209 GRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGP--SLCPRLC-----PGGPV 261
GRG GF R R R + QT P Q P S P++C PG P
Sbjct: 45 GRGVGFKRIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPT 104
Query: 262 RLRPRARPSPGSRSPCGA 279
R + P PG++ P G+
Sbjct: 105 RSCIQQEPPPGNKLPAGS 122
>gi|169164936 PREDICTED: family with sequence similarity 132, member
B [Homo sapiens]
Length = 367
Score = 31.6 bits (70), Expect = 0.85
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 25/103 (24%)
Query: 195 VFLQQPPRGFCGRGGRGPGFLSFRRRRPRSGRLR-GVPGQTLPAFRGLGRRLPQGPSLCP 253
+F++Q +G G+ +R R ++ +L+ G+PG P G + P GP + P
Sbjct: 97 LFVRQSDKGVNGK----------KRSRGKAKKLKFGLPGPPGPP----GPQGPPGPIIPP 142
Query: 254 -------RLCPGGPVRLRPRARPSP---GSRSPCGARLLGVSA 286
+L G VR R RA P P G P A L VSA
Sbjct: 143 EALLKEFQLLLKGAVRQRERAEPEPCTCGPAGPVAASLAPVSA 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,078,359
Number of Sequences: 37866
Number of extensions: 881142
Number of successful extensions: 3331
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 3260
Number of HSP's gapped (non-prelim): 180
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.