Search of human proteins with 239757960

Search of human proteins with 239757960

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
         (292 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]           619   e-178
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]           451   e-127
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]           450   e-127
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]           444   e-125
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]           207   7e-54
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]           207   1e-53
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               57   3e-08
gi|33286436 gametogenetin [Homo sapiens]                               56   4e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             50   2e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     50   2e-06
gi|54860079 nadrin isoform 1 [Homo sapiens]                            50   3e-06
gi|54860105 nadrin isoform 2 [Homo sapiens]                            50   3e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    49   4e-06
gi|41281612 zinc finger protein 828 [Homo sapiens]                     49   5e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    49   7e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    49   7e-06
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...    48   9e-06
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]            48   9e-06
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      48   1e-05
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    47   3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    47   3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    47   3e-05
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            46   3e-05
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi...    46   3e-05
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]            46   3e-05
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    46   3e-05
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    46   3e-05

>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score =  619 bits (1597), Expect = e-178
 Identities = 292/292 (100%), Positives = 292/292 (100%)

Query: 1   MGLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAG 60
           MGLGPRPSAGAGAGAGRRPAARQVAPPGGP SLARTHSRRHPDHAPPPGRPSCSRPLCAG
Sbjct: 1   MGLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAG 60

Query: 61  SSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVP 120
           SSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVP
Sbjct: 61  SSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVP 120

Query: 121 AAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRAR 180
           AAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRAR
Sbjct: 121 AAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRAR 180

Query: 181 PHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRG 240
           PHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRG
Sbjct: 181 PHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRG 240

Query: 241 QGLAGSQARGTRDPEAAQAMLHHLGAQLQAPGNFQAGWRAQPRRTGARCRRD 292
           QGLAGSQARGTRDPEAAQAMLHHLGAQLQAPGNFQAGWRAQPRRTGARCRRD
Sbjct: 241 QGLAGSQARGTRDPEAAQAMLHHLGAQLQAPGNFQAGWRAQPRRTGARCRRD 292


>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score =  451 bits (1160), Expect = e-127
 Identities = 211/220 (95%), Positives = 213/220 (96%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA 65
           +PSA AGAGAGR PAARQVAPPGGP SLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA
Sbjct: 26  QPSARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA 85

Query: 66  TPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPIS 125
           TPEPARAPSIAEPGPGIPVAA KP +LPGGGGCTGARTENPPLSPTRGDCRVPVPAA IS
Sbjct: 86  TPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQIS 145

Query: 126 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 185
           LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH
Sbjct: 146 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 205

Query: 186 LGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDP 225
           LGTRARCPCGCGEARRSALQQLHGGGNRPSAPS VAVEDP
Sbjct: 206 LGTRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 245



 Score = 32.7 bits (73), Expect = 0.39
 Identities = 53/187 (28%), Positives = 65/187 (34%), Gaps = 24/187 (12%)

Query: 125 SLRWRSGREARPGGPQAGRAGDPKADQAMHLQ--PAWAPKLQPPSVCRQQPPGNS-RARP 181
           S R  +G    P   Q    G P +    H +  P  AP    PS  R    G+S  A P
Sbjct: 28  SARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 87

Query: 182 HSPHLGTRARCPCGCGEARRSALQQLHGGG-------NRPSAPSRVAVEDPWLEVSSSGR 234
                 + A    G   A    +    GGG       N P +P+R     P      S R
Sbjct: 88  EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLR 147

Query: 235 GGPGRGQGLAGSQARGTRDPEAAQAMLHHLG------------AQLQAPGNFQAGWRAQP 282
              GR     G QA    DP+A QAM  HL              + Q PGN +A   +  
Sbjct: 148 WRSGREARPGGPQAGRAGDPKADQAM--HLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 205

Query: 283 RRTGARC 289
             T ARC
Sbjct: 206 LGTRARC 212


>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score =  450 bits (1157), Expect = e-127
 Identities = 210/220 (95%), Positives = 213/220 (96%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA 65
           +PSA AGAGAGR PAARQVAPPGGP SLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA
Sbjct: 26  QPSARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA 85

Query: 66  TPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPIS 125
           TPEPAR+PSIAEPGPGIPVAA KP +LPGGGGCTGARTENPPLSPTRGDCRVPVPAA IS
Sbjct: 86  TPEPARSPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQIS 145

Query: 126 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 185
           LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH
Sbjct: 146 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 205

Query: 186 LGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDP 225
           LGTRARCPCGCGEARRSALQQLHGGGNRPSAPS VAVEDP
Sbjct: 206 LGTRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 245



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 53/187 (28%), Positives = 65/187 (34%), Gaps = 24/187 (12%)

Query: 125 SLRWRSGREARPGGPQAGRAGDPKADQAMHLQ--PAWAPKLQPPSVCRQQPPGNS-RARP 181
           S R  +G    P   Q    G P +    H +  P  AP    PS  R    G+S  A P
Sbjct: 28  SARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 87

Query: 182 HSPHLGTRARCPCGCGEARRSALQQLHGGG-------NRPSAPSRVAVEDPWLEVSSSGR 234
                 + A    G   A    +    GGG       N P +P+R     P      S R
Sbjct: 88  EPARSPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLR 147

Query: 235 GGPGRGQGLAGSQARGTRDPEAAQAMLHHLG------------AQLQAPGNFQAGWRAQP 282
              GR     G QA    DP+A QAM  HL              + Q PGN +A   +  
Sbjct: 148 WRSGREARPGGPQAGRAGDPKADQAM--HLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 205

Query: 283 RRTGARC 289
             T ARC
Sbjct: 206 LGTRARC 212


>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 218

 Score =  444 bits (1143), Expect = e-125
 Identities = 207/217 (95%), Positives = 209/217 (96%)

Query: 9   AGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 68
           +  GAGAGR PAARQVAPPGGP SLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE
Sbjct: 2   SNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 61

Query: 69  PARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRW 128
           PARAPSIAEPGPGIPVAA KP +LPGGGGCTGARTENPPLSPTRGDCRVPVPAA ISLRW
Sbjct: 62  PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 121

Query: 129 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 188
           RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT
Sbjct: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 181

Query: 189 RARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDP 225
           RARCPCGCGEARRSALQQLHGGGNRPSAPS VAVEDP
Sbjct: 182 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218



 Score = 31.6 bits (70), Expect = 0.86
 Identities = 51/182 (28%), Positives = 63/182 (34%), Gaps = 24/182 (13%)

Query: 130 SGREARPGGPQAGRAGDPKADQAMHLQ--PAWAPKLQPPSVCRQQPPGNS-RARPHSPHL 186
           +G    P   Q    G P +    H +  P  AP    PS  R    G+S  A P     
Sbjct: 6   AGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARA 65

Query: 187 GTRARCPCGCGEARRSALQQLHGGG-------NRPSAPSRVAVEDPWLEVSSSGRGGPGR 239
            + A    G   A    +    GGG       N P +P+R     P      S R   GR
Sbjct: 66  PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGR 125

Query: 240 GQGLAGSQARGTRDPEAAQAMLHHLG------------AQLQAPGNFQAGWRAQPRRTGA 287
                G QA    DP+A QAM  HL              + Q PGN +A   +    T A
Sbjct: 126 EARPGGPQAGRAGDPKADQAM--HLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRA 183

Query: 288 RC 289
           RC
Sbjct: 184 RC 185


>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  207 bits (528), Expect = 7e-54
 Identities = 98/109 (89%), Positives = 99/109 (90%)

Query: 153 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 212
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60

Query: 213 RPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAML 261
           RPSA S VA E PWLEVSSSG GG GRGQGL GSQARGT DPEAAQAML
Sbjct: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAML 109



 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 65  ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPI 124
           ATP+ A APS+A+PG  + VAAAKPG L  GGGCTGA T+  P        R    AAP 
Sbjct: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175

Query: 125 SLRWRSG 131
           SLR R G
Sbjct: 176 SLRRRRG 182


>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  207 bits (526), Expect = 1e-53
 Identities = 98/109 (89%), Positives = 99/109 (90%)

Query: 153 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 212
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60

Query: 213 RPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAML 261
           RPSA S VA E PWLEVSSSG GG GRGQGLAGSQAR T DPEAAQAML
Sbjct: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAML 109



 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 65  ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPI 124
           ATP+ A APS+A+PG  + VAAAKPG L  GGGCTGA T+  P        R    AAP 
Sbjct: 120 ATPKLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175

Query: 125 SLRWRSG 131
           SLR R G
Sbjct: 176 SLRRRRG 182


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 77/289 (26%), Positives = 108/289 (37%), Gaps = 41/289 (14%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRP----SCSRPLCAG 60
           PR S G   G  RR  + +  PP    S       R P      G P    + SR   + 
Sbjct: 268 PRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASS 327

Query: 61  SSCLATPEPARAPSIAEPGPGIPVAA--AKPGVLPGGGGCT------GARTENPPLSPTR 112
               A PEPA  P+   P P  P      K   +PG    T       AR + PPL+  R
Sbjct: 328 WESEAAPEPAAPPAAPSP-PDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGR 386

Query: 113 GDCRVPVPAAPISLRWRSGREA----RPGGPQAGRAGDPKADQAMHLQPAWAPKLQP--P 166
              + P    P     R GR A    R G P+A +A   +++ ++  + +  P   P  P
Sbjct: 387 SVEQSPPRERP-RAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYP 445

Query: 167 SVCRQQPPGNSRARPHSPHLGTRARCPC-------------GCGEARRSALQQLHGGGNR 213
           +  R++P      R  +P L  +A   C             G     R+   ++ G G  
Sbjct: 446 TAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPS 505

Query: 214 PSAPSR-----VAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAA 257
           PSAP R      A  D      S+GR GP   +G AG    G  + E++
Sbjct: 506 PSAPQRRLLYGCAGSD---SECSAGRLGPLGRRGPAGGVGGGYGESESS 551


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 81/247 (32%), Positives = 97/247 (39%), Gaps = 50/247 (20%)

Query: 9   AGAGAGAGRRPAARQVAPPGG-PXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 67
           AG G GA RR AA    P G  P    + HS      AP P RP+              P
Sbjct: 369 AGGGIGAPRRRAAALSGPWGSPPPPPEQIHS------APGPRRPA--------------P 408

Query: 68  EPARAPSIAEPGP--GIPVAAAKPGV--LPGGGGCTGARTENPP-LSPTRGDCRVPVPAA 122
                P+   P P  G P+    PG+  LP     T   T  PP L PT      P+P A
Sbjct: 409 ALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPT------PLPVA 462

Query: 123 PISLRWRSGREARPGGPQAGRAGDP--KADQAMHLQPAWAPKLQPPSVCRQQPPGNSRAR 180
           P  L    G +     P A  A  P   ADQA    PA AP +  PS     PP ++ A 
Sbjct: 463 P-PLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAPAPTVAEPS-----PPVSAPA- 515

Query: 181 PHSPHLGTRARCPCGCGEARRSALQQ-LHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGR 239
           P +  + TR R   G   AR +  +  LHG G R  A + V          SSG GG G 
Sbjct: 516 PAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRERATATVP--------DSSGGGGGGS 567

Query: 240 GQGLAGS 246
           G    G+
Sbjct: 568 GASQTGA 574


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 66/271 (24%), Positives = 87/271 (32%), Gaps = 38/271 (14%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCL 64
           P PS G+G G+ +R         GG    +  H  R      PP +PS   P     +  
Sbjct: 300 PSPSGGSGWGSPQRN--------GGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAA 351

Query: 65  ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGG------CTGARTENPPLSPTRGDCRVP 118
           A P P      +      P +  + G   GG G          R+ +   +P R   R P
Sbjct: 352 AAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRP 411

Query: 119 VPAAP-----------ISLRWRSGREARPGGPQAG--RAGDPKADQAMHLQPAWAPKLQP 165
            PA P            S    SGR A   GP+ G  R       +A    P   P    
Sbjct: 412 RPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTS 471

Query: 166 PSV----CRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVA 221
           PS      R  P G S +R   PH       P     +R  +  +      RP +PSR  
Sbjct: 472 PSPGAHGRRGGPEGKSSSRSPGPH-------PRSWSSSRSPSKSRSRSAEKRPHSPSRSP 524

Query: 222 VEDPWLEVSSSGRGGPGRGQGLAGSQARGTR 252
                L     G G     +  A    R +R
Sbjct: 525 SPKKPLSRDKDGEGRARHSEAEATRARRRSR 555



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 42/159 (26%), Positives = 56/159 (35%), Gaps = 31/159 (19%)

Query: 129 RSGREARPGGPQAGRAGD-------PKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARP 181
           R+G   +  G   GR G        P +        A A    PP+  ++ P  + R+ P
Sbjct: 313 RNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESP--SPRSAP 370

Query: 182 HSPHLGTRARCPCGCGEARRSALQQLHGGGN----------RPSAP---SRVAVEDPWLE 228
            S   G RA    G    RR   ++     +          RP+ P   SR         
Sbjct: 371 SSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSS 430

Query: 229 VSSSGRGGPG--------RGQGLAGSQARGTRDPEAAQA 259
            S SGRG PG        RG G  G +A+  R P A  A
Sbjct: 431 DSGSGRGAPGPGPEPGSERGHGGHGKRAK-ERPPRARPA 468



 Score = 28.5 bits (62), Expect = 7.3
 Identities = 53/235 (22%), Positives = 81/235 (34%), Gaps = 24/235 (10%)

Query: 4   GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
           GP P  G+  G G      +  PP    +        H     P G+ S   P     S 
Sbjct: 440 GPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSW 499

Query: 64  LATPEPARAPS-IAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTR-GDCRVPVPA 121
            ++  P+++ S  AE  P  P  +  P                 PLS  + G+ R     
Sbjct: 500 SSSRSPSKSRSRSAEKRPHSPSRSPSP---------------KKPLSRDKDGEGRARHSE 544

Query: 122 APISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARP 181
           A  +   R+ R +R   P   R  D  +   M  +   + + +P    R  P  +S    
Sbjct: 545 AEAT---RARRRSRSYSPIRKRRRD--SPSFMEPRRITSARKRPIPYYRPSPSSSSSCLS 599

Query: 182 HSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGG 236
                 + +R P   G +  S   + HG  +R  +PSR      +   SSS  GG
Sbjct: 600 SDYSTRSHSRSP-SPGHSHGSYSSRSHGTRSRTRSPSRTP-SPSYHSRSSSESGG 652


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 65/220 (29%), Positives = 82/220 (37%), Gaps = 21/220 (9%)

Query: 45  APPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTE 104
           A PP  P   R   A ++  A P     P+ A P P  PVAAA P   P           
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPP-----PTPAPPPPPAPVAAAAPARAPRAAAAAATAPP 160

Query: 105 NP-PLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKL 163
           +P P  P     R    AAP          A P GP   R   P A  A   +P   P  
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGP---RRAPPPAVAAR--EPPLPPPP 215

Query: 164 QPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEAR----RSALQQLHGGGNRPSAPSR 219
           QPP+  +QQ P   + +P       RA      G AR    R  ++ L G G      +R
Sbjct: 216 QPPAPPQQQQPPPPQPQPPPEGGAVRAG-----GAARPVSLREVVRYLGGSGGAGGRLTR 270

Query: 220 VAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQA 259
             V+   LE  ++ RG   R +  A +  RG R   A  A
Sbjct: 271 GRVQG-LLEEEAAARGRLERTRLGALALPRGDRPGRAPPA 309



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 43/141 (30%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHP------DHAPPPGRPSCSRPLC 58
           PR   GA A A         APP  P  +A     R P        APP   P+   P  
Sbjct: 112 PRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA 171

Query: 59  AGSSCLATPEPARA--PSIAEP-----GPGIPVAAAKPGVLPGGGGCTGARTENPP---- 107
             ++ LA P PA A  P++A P      P   VAA +P + P        + + PP    
Sbjct: 172 QRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQP 231

Query: 108 -LSPTRGDCRVPVPAAPISLR 127
              P  G  R    A P+SLR
Sbjct: 232 QPPPEGGAVRAGGAARPVSLR 252


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 54/233 (23%), Positives = 83/233 (35%), Gaps = 28/233 (12%)

Query: 7   PSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLAT 66
           P   + +G  + P +    PP    S    H+ +      PPG+PS    L A     ++
Sbjct: 651 PGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQ------PPGQPSAPSQLSAPRRYSSS 704

Query: 67  PEPARAPSIAEPGP---GIPVAAAKPG--------VLPGGGGC-----TGARTENPPLSP 110
             P +AP+   P P     P+   KP          LP   G      T  +T  PP +P
Sbjct: 705 LSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTP 764

Query: 111 TRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 170
             G     +PA P +L   +G       P AG    P+       +P+  P  QPP V  
Sbjct: 765 PLGKQNPSLPA-PQTL---AGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHS 820

Query: 171 QQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVE 223
                 +   P +  + T +       E  RS   ++H        P R+ ++
Sbjct: 821 AGDSSLTNTAPTASKIVTDSN--SRVSEPHRSIFPEMHSDSASKDVPGRILLD 871



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 65/272 (23%), Positives = 91/272 (33%), Gaps = 40/272 (14%)

Query: 4   GPRPS-----AGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHA--PPPGRPSC--- 53
           GP P      A + +G G  P++  +   G           + P  A  P PGR +    
Sbjct: 539 GPEPPPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGRNNSQIA 598

Query: 54  ---SRPLCAGSS---CLATPEPARAPS-------IAEPGPGIPVAAAKPGVLPGGGGCTG 100
              ++P  A  S    +  P  A  PS       + +P P  P     P   PGG   +G
Sbjct: 599 SGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSG 658

Query: 101 ARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWA 160
                P LSP       P   +P      +G+   PG P A          +  L P  A
Sbjct: 659 TSQHPPSLSPK------PPTRSPSPPTQHTGQP--PGQPSAPSQLSAPRRYSSSLSPIQA 710

Query: 161 PKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSR- 219
           P   PP     QPP  +    H+         P     +     Q  H     P+ PS  
Sbjct: 711 PNHPPP-----QPPTQATPLMHTKPNSQGPPNPMAL-PSEHGLEQPSHTPPQTPTPPSTP 764

Query: 220 -VAVEDPWLEVSSSGRGG-PGRGQGLAGSQAR 249
            +  ++P L    +  GG P   Q  AG+  R
Sbjct: 765 PLGKQNPSLPAPQTLAGGNPETAQPHAGTLPR 796


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 54/233 (23%), Positives = 83/233 (35%), Gaps = 28/233 (12%)

Query: 7   PSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLAT 66
           P   + +G  + P +    PP    S    H+ +      PPG+PS    L A     ++
Sbjct: 573 PGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQ------PPGQPSAPSQLSAPRRYSSS 626

Query: 67  PEPARAPSIAEPGP---GIPVAAAKPG--------VLPGGGGC-----TGARTENPPLSP 110
             P +AP+   P P     P+   KP          LP   G      T  +T  PP +P
Sbjct: 627 LSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTP 686

Query: 111 TRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 170
             G     +P AP +L   +G       P AG    P+       +P+  P  QPP V  
Sbjct: 687 PLGKQNPSLP-APQTL---AGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHS 742

Query: 171 QQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVE 223
                 +   P +  + T +       E  RS   ++H        P R+ ++
Sbjct: 743 AGDSSLTNTAPTASKIVTDSN--SRVSEPHRSIFPEMHSDSASKDVPGRILLD 793



 Score = 36.2 bits (82), Expect = 0.035
 Identities = 55/223 (24%), Positives = 75/223 (33%), Gaps = 33/223 (14%)

Query: 46  PPPGRPSC------SRPLCAGSS---CLATPEPARAPS-------IAEPGPGIPVAAAKP 89
           P PGR +       ++P  A  S    +  P  A  PS       + +P P  P     P
Sbjct: 510 PAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPP 569

Query: 90  GVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKA 149
              PGG   +G     P LSP       P   +P      +G+   PG P A        
Sbjct: 570 PGHPGGQSSSGTSQHPPSLSPK------PPTRSPSPPTQHTGQP--PGQPSAPSQLSAPR 621

Query: 150 DQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHG 209
             +  L P  AP   PP     QPP  +    H+         P     +     Q  H 
Sbjct: 622 RYSSSLSPIQAPNHPPP-----QPPTQATPLMHTKPNSQGPPNPMAL-PSEHGLEQPSHT 675

Query: 210 GGNRPSAPSR--VAVEDPWLEVSSSGRGG-PGRGQGLAGSQAR 249
               P+ PS   +  ++P L    +  GG P   Q  AG+  R
Sbjct: 676 PPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPR 718


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 65/232 (28%), Positives = 76/232 (32%), Gaps = 43/232 (18%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHA------------PPPG 49
           G GP P  G G G G+           G  +L  +H    P  +            P P 
Sbjct: 173 GPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPA 232

Query: 50  RPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLS 109
            P             A P PA     A P P  P AA  P   P     T AR    P  
Sbjct: 233 APGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPP---PPPAPATLARPPGHPAG 289

Query: 110 PTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVC 169
           P      VP PAA           A+ GG  AG A            PA AP    P+  
Sbjct: 290 PPTAAPAVPPPAA-----------AQNGG-SAGAA------------PAPAPAAGGPAGV 325

Query: 170 RQQP-PGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRV 220
             QP PG + A   +P  G +A  P    +A   A Q L   G   +A S V
Sbjct: 326 SGQPGPGAAAA---APAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMV 374



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 78/300 (26%), Positives = 99/300 (33%), Gaps = 52/300 (17%)

Query: 2   GLGPR-PSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPD------------HAPPP 48
           G GP  P+ GA   A   P A +  P GG        S R P               PP 
Sbjct: 72  GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPE 131

Query: 49  GRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGG-----------G 97
           G      P+ A ++  A PEPA A      GP    A A PG  PG G           G
Sbjct: 132 GSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG 191

Query: 98  CTGARTEN-------------PPLSPTRGD----CRVPVPAAPISLRWRSGREARPGGPQ 140
              A+T N             P +S           +P PAAP ++  ++        P 
Sbjct: 192 PGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTV-IQTPPFVGAAAPP 250

Query: 141 AGRAGDPKADQAMHLQPAWAPKLQPPS-VCRQQPPGNSRARPHS-----PHLGTRARCPC 194
           A  A  P A  A    PA AP   PP+     +PPG+    P +     P    +     
Sbjct: 251 APAAPSPPAAPA-PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSA 309

Query: 195 GCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGR---GGPGRGQGLAGSQARGT 251
           G   A   A     G   +P   +  A   P ++  S  R     P   Q LA S    T
Sbjct: 310 GAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAST 369



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 46/166 (27%), Positives = 57/166 (34%), Gaps = 38/166 (22%)

Query: 3   LGPRPSAGAGAGA-GRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGS 61
           LG    +G+ AGA G  PAA     PG                AP P     +RP   G 
Sbjct: 58  LGNHVVSGSPAGAAGAGPAAPAEGAPG---------------AAPEPPPAGRARPGGGGP 102

Query: 62  SCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGC--------TGARTENPPLSPTRG 113
                P P R   +   GP  P A  +P      G C          A  E  P  P + 
Sbjct: 103 QRPGPPSPRR--PLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK- 159

Query: 114 DCRVPVPAAPISLRWRSGREARPG-----GPQAGRAGDPKADQAMH 154
                 PA P +L  R+G    PG     GP  G+   P A Q ++
Sbjct: 160 ------PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLN 199



 Score = 34.7 bits (78), Expect = 0.10
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRP-SCSRPLCAGSSC 63
           P P+AG  AG   +P     A    P   A +  +R    APP  +  + S P    +S 
Sbjct: 315 PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES-PKRVVQAAPPAAQTLAASGPASTAASM 373

Query: 64  L-------ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPT 111
           +       A P PA  P    P PG P    K        G  GA T++   +PT
Sbjct: 374 VIGPTMQGALPSPAAVP---PPAPGTPTGLPK--------GAAGAVTQSLSRTPT 417



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 50/192 (26%), Positives = 64/192 (33%), Gaps = 50/192 (26%)

Query: 81  GIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQ 140
           G P  AA  G      G  GA  E PP                      +GR ARPGG  
Sbjct: 65  GSPAGAAGAGPAAPAEGAPGAAPEPPP----------------------AGR-ARPGGGG 101

Query: 141 AGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEAR 200
             R G P   + +       P    P   + +PP    A       G+ A  P     A 
Sbjct: 102 PQRPGPPSPRRPL------VPAGPAPPAAKLRPPPEGSA-------GSCAPVPAAAAVA- 147

Query: 201 RSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRG-----GPGRGQGL-AGSQARGTRDP 254
            +  +    G  +P+ P+ +A        +  G G     GPG G G  AG  A  T + 
Sbjct: 148 -AGPEPAPAGPAKPAGPAALAAR------AGPGPGPGPGPGPGPGPGKPAGPGAAQTLNG 200

Query: 255 EAAQAMLHHLGA 266
            AA    HH  A
Sbjct: 201 SAALLNSHHAAA 212


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 48/201 (23%), Positives = 73/201 (36%), Gaps = 32/201 (15%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPP----PGRPSCSRPLCAGS 61
           R SA   +   R+P+  +   P  P        RR      P    PG P   RP  +  
Sbjct: 268 RKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNP 327

Query: 62  SCLATP-EPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVP 120
           S  + P +PA+      PGP  P+ +  PG        + A  ++  +SP+         
Sbjct: 328 SASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPS--------- 378

Query: 121 AAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRAR 180
                  W+S     P  P++ ++G P+  +        AP L P    +  PP +   R
Sbjct: 379 ------SWKS----PPASPESWKSGPPELRKT-------APTLSPEH-WKAVPPVSPELR 420

Query: 181 PHSPHLGTRARCPCGCGEARR 201
              P L    R P G  E R+
Sbjct: 421 KPGPPLSPEIRSPAGSPELRK 441


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 57/202 (28%), Positives = 71/202 (35%), Gaps = 26/202 (12%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGS 61
           G  P PS G  +G    P   ++ PP       R      PD  PPP  PS  RP+ +  
Sbjct: 148 GRFPVPSPGHRSGPPE-PQRNRMPPP-------RPDVGSKPDSIPPPV-PSTPRPIQSSP 198

Query: 62  SCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGG-------GCTGARTENPPLSPTRG- 113
               +P     P    PGP  P      G   GGG         +   +  PPL PT   
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258

Query: 114 --DCRVPVPAAPISLRWRSGREA-RPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 170
             D + P P  P+  R    REA  P  PQ  +   P   +      A  P   PP   R
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP---PPPPSR 315

Query: 171 QQP---PGNSRARPHSPHLGTR 189
             P   P +S     +P L  R
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQR 337



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 23/142 (16%)

Query: 87  AKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGD 146
           ++P +LP GG  T A+    P SP  G  R PVP+         G  + P  PQ  R   
Sbjct: 124 SRPPLLPPGGRSTSAK----PFSPPSGPGRFPVPS--------PGHRSGPPEPQRNRMPP 171

Query: 147 PKADQAMHLQPAWAPKLQPPSVCRQQP--------PGNSR---ARPHSPHLGTRARCPCG 195
           P+ D          P    P   +  P        PG  R     P  P          G
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231

Query: 196 CGEARRSALQQLHGGGNRPSAP 217
            G  R+S L       NRP  P
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLP 253



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 44/149 (29%), Positives = 52/149 (34%), Gaps = 18/149 (12%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDH-------APPPGRPSCSRPL 57
           PRPSA + A     P +R   PP  P S     + R P          PP   P  S PL
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 58  CAGSSCLATPEPARAPSIAEPGPGIP-------VAAAKPGV--LPGGGGCTGART-ENPP 107
               S    P     P  + P P  P        + A P    LP   G    R+   PP
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417

Query: 108 LSPTRGDCRVPVPAAPISLRWRSGREARP 136
           L P R     P P  P S   R+G +  P
Sbjct: 418 LPPDRPSAGAPPPPPP-STSIRNGFQDSP 445



 Score = 32.0 bits (71), Expect = 0.66
 Identities = 61/245 (24%), Positives = 78/245 (31%), Gaps = 49/245 (20%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPG-------GPXSLARTHSRRH------PDHAPPP 48
           G G     G G G G   +     PPG       G   L  T +R +      P   PP 
Sbjct: 73  GFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPG 132

Query: 49  GRPSCSRPLC--AGSSCLATPEPARAPSIAEP-----GPGIPVAAAKPGVLPGGGGCTGA 101
           GR + ++P    +G      P P       EP      P  P   +KP  +P     T  
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR 192

Query: 102 RTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPG---GPQAGRAGDPKADQAMHLQPA 158
             ++ P    RG    PVP  P        R+  PG    P  G  G      ++   P 
Sbjct: 193 PIQSSP--HNRGS--PPVPGGP--------RQPSPGPTPPPFPGNRGTALGGGSIRQSP- 239

Query: 159 WAPKLQPPSVCRQQPPGNSRA-----RPHSPHLGTRARCPCGCGEARRSALQQLHGGGNR 213
                 P S     PP  SRA      P  P +G R           R A+       N+
Sbjct: 240 -LSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRP-------SIHREAVPPPPPQNNK 291

Query: 214 PSAPS 218
           P  PS
Sbjct: 292 PPVPS 296


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 57/202 (28%), Positives = 71/202 (35%), Gaps = 26/202 (12%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGS 61
           G  P PS G  +G    P   ++ PP       R      PD  PPP  PS  RP+ +  
Sbjct: 148 GRFPVPSPGHRSGPPE-PQRNRMPPP-------RPDVGSKPDSIPPPV-PSTPRPIQSSP 198

Query: 62  SCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGG-------GCTGARTENPPLSPTRG- 113
               +P     P    PGP  P      G   GGG         +   +  PPL PT   
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258

Query: 114 --DCRVPVPAAPISLRWRSGREA-RPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 170
             D + P P  P+  R    REA  P  PQ  +   P   +      A  P   PP   R
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP---PPPPSR 315

Query: 171 QQP---PGNSRARPHSPHLGTR 189
             P   P +S     +P L  R
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQR 337



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 23/142 (16%)

Query: 87  AKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGD 146
           ++P +LP GG  T A+    P SP  G  R PVP+         G  + P  PQ  R   
Sbjct: 124 SRPPLLPPGGRSTSAK----PFSPPSGPGRFPVPS--------PGHRSGPPEPQRNRMPP 171

Query: 147 PKADQAMHLQPAWAPKLQPPSVCRQQP--------PGNSR---ARPHSPHLGTRARCPCG 195
           P+ D          P    P   +  P        PG  R     P  P          G
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231

Query: 196 CGEARRSALQQLHGGGNRPSAP 217
            G  R+S L       NRP  P
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLP 253



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 44/149 (29%), Positives = 52/149 (34%), Gaps = 18/149 (12%)

Query: 5   PRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDH-------APPPGRPSCSRPL 57
           PRPSA + A     P +R   PP  P S     + R P          PP   P  S PL
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 58  CAGSSCLATPEPARAPSIAEPGPGIP-------VAAAKPGV--LPGGGGCTGART-ENPP 107
               S    P     P  + P P  P        + A P    LP   G    R+   PP
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417

Query: 108 LSPTRGDCRVPVPAAPISLRWRSGREARP 136
           L P R     P P  P S   R+G +  P
Sbjct: 418 LPPDRPSAGAPPPPPP-STSIRNGFQDSP 445



 Score = 32.0 bits (71), Expect = 0.66
 Identities = 61/245 (24%), Positives = 78/245 (31%), Gaps = 49/245 (20%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPG-------GPXSLARTHSRRH------PDHAPPP 48
           G G     G G G G   +     PPG       G   L  T +R +      P   PP 
Sbjct: 73  GFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPG 132

Query: 49  GRPSCSRPLC--AGSSCLATPEPARAPSIAEP-----GPGIPVAAAKPGVLPGGGGCTGA 101
           GR + ++P    +G      P P       EP      P  P   +KP  +P     T  
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR 192

Query: 102 RTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPG---GPQAGRAGDPKADQAMHLQPA 158
             ++ P    RG    PVP  P        R+  PG    P  G  G      ++   P 
Sbjct: 193 PIQSSP--HNRGS--PPVPGGP--------RQPSPGPTPPPFPGNRGTALGGGSIRQSP- 239

Query: 159 WAPKLQPPSVCRQQPPGNSRA-----RPHSPHLGTRARCPCGCGEARRSALQQLHGGGNR 213
                 P S     PP  SRA      P  P +G R           R A+       N+
Sbjct: 240 -LSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRP-------SIHREAVPPPPPQNNK 291

Query: 214 PSAPS 218
           P  PS
Sbjct: 292 PPVPS 296


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 70/240 (29%), Positives = 83/240 (34%), Gaps = 33/240 (13%)

Query: 18  RPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLC------AGSSCLATPEPAR 71
           RP  +   P      +     R    ++ P  R S    LC      A +   A P  A 
Sbjct: 5   RPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAE 64

Query: 72  APSIAEPGPGIPVAAAKPGVLPGGGGCTG---------ARTENPPLSPTRGDCRVPVPAA 122
           +P   E  P  P  A  PG   GGGG  G         A+ E    +    D    V AA
Sbjct: 65  SPDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFG-HVRAA 123

Query: 123 PISLRWR--SGREARPGGPQAGRAGDPKADQA---MHLQPAWAPKLQPPSVCRQQPPGNS 177
           P  LR R    R    GG  AGRA  P  D+A     L    AP+L  P V    PP  +
Sbjct: 124 PSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPV----PPSVA 179

Query: 178 RARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGP 237
                S  LG R   P G    R S          R S+P R A       +   GRG P
Sbjct: 180 HVARASAGLGARP-VPGGPAGPRES-------WARRTSSPPRGAAGGGRPFLHPGGRGDP 231


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 70/240 (29%), Positives = 83/240 (34%), Gaps = 33/240 (13%)

Query: 18  RPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLC------AGSSCLATPEPAR 71
           RP  +   P      +     R    ++ P  R S    LC      A +   A P  A 
Sbjct: 5   RPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAE 64

Query: 72  APSIAEPGPGIPVAAAKPGVLPGGGGCTG---------ARTENPPLSPTRGDCRVPVPAA 122
           +P   E  P  P  A  PG   GGGG  G         A+ E    +    D    V AA
Sbjct: 65  SPDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFG-HVRAA 123

Query: 123 PISLRWR--SGREARPGGPQAGRAGDPKADQA---MHLQPAWAPKLQPPSVCRQQPPGNS 177
           P  LR R    R    GG  AGRA  P  D+A     L    AP+L  P V    PP  +
Sbjct: 124 PSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPV----PPSVA 179

Query: 178 RARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGP 237
                S  LG R   P G    R S          R S+P R A       +   GRG P
Sbjct: 180 HVARASAGLGARP-VPGGPAGPRES-------WARRTSSPPRGAAGGGRPFLHPGGRGDP 231


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 76/293 (25%), Positives = 102/293 (34%), Gaps = 24/293 (8%)

Query: 4    GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
            GP   +G     G +    +   PGGP +     +R  P   PP    +   P  +GS  
Sbjct: 843  GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLP--GPPGSNGNPGPPGPSGSPG 900

Query: 64   LATPEPARAPSIAEPG-PGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAA 122
               P P  A +   PG PG+       G  PG  G  GA  + PP +P       P+  A
Sbjct: 901  KDGP-PGPAGNTGAPGSPGVSGPKGDAGQ-PGEKGSPGA--QGPPGAPG------PLGIA 950

Query: 123  PIS-LRWRSGREARPG-----GPQA--GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP 174
             I+  R  +G    PG     GPQ   G +G P A+     +    P+  P        P
Sbjct: 951  GITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEP 1010

Query: 175  GNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGR 234
            G     P S  L  R   P G G+   +      G    P  P  V       +   SG 
Sbjct: 1011 GRD-GNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGP 1069

Query: 235  GGPGRGQGLAGSQARGTRDPEAAQAMLHHLGAQLQAPGNFQAGWRAQPRRTGA 287
             GP    G AGS  RG   P+  +      G +  A      G+   P   G+
Sbjct: 1070 AGPAGAPGPAGS--RGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGS 1120



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 84/314 (26%), Positives = 103/314 (32%), Gaps = 65/314 (20%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPL-------C 58
           +     G  AG    A    PPG P +     S   P +  PPG P  + P         
Sbjct: 161 KSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGA 220

Query: 59  AGSSCLA-----TPEPARAPSIAEPG-PGIPVAAAKPGVLPGGGGCTGARTENPPLSPT- 111
            G S  A     +  P R      PG PGI   A  PG  PG  G  G    N     T 
Sbjct: 221 IGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPG-FPGMKGHRGFDGRNGEKGETG 279

Query: 112 ----RGDCRVP---VPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ 164
               +G+  +P       P+  R   G   RPG P A  A      +    QP       
Sbjct: 280 APGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPG------ 333

Query: 165 PPSVCRQQPPGNSRARPHSPHLGTRARC-PCGCGEARRSALQ------QLHGGGNRPSAP 217
           PP      PPG +   P SP  G +    P G   +  +  Q      Q H G   P  P
Sbjct: 334 PPG-----PPGTA-GFPGSP--GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGP 385

Query: 218 SRVAVEDPWLEVSSSGRG--GPGRGQGLAGSQ-ARGTRDPEAAQAMLHHLGAQLQAPGNF 274
                  P +  S  G+G  GP    G  G   ARG   P  A            APG  
Sbjct: 386 -------PGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANG----------APG-- 426

Query: 275 QAGWRAQPRRTGAR 288
             G   +P + GA+
Sbjct: 427 LRGGAGEPGKNGAK 440



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 70/255 (27%), Positives = 81/255 (31%), Gaps = 29/255 (11%)

Query: 4   GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
           GP   AGA    G R  A +   PG   +      R     A  PG P            
Sbjct: 414 GPPGPAGANGAPGLRGGAGE---PGKNGAKGEPGPRGERGEAGIPGVPG----------- 459

Query: 64  LATPEPARAPSIAEPGP-GIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAA 122
            A  E  +  S  EPG  G+P AA + G  PG  G  G         P  G+   P PA 
Sbjct: 460 -AKGEDGKDGSPGEPGANGLPGAAGERGA-PGFRGPAGPNGIPGEKGPA-GERGAPGPAG 516

Query: 123 PISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPH 182
           P       GR+  PGGP  G  G P +           P        R  PPG S  R  
Sbjct: 517 PRGAAGEPGRDGVPGGP--GMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQ 574

Query: 183 SPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVE-------DPWLEVSSSGRG 235
              +G     P G   A     ++   GG  P  P     E        P       G  
Sbjct: 575 PGVMGFPG--PKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDT 632

Query: 236 GPGRGQGLAGSQARG 250
           GP   QGL G    G
Sbjct: 633 GPPGPQGLQGLPGTG 647



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 42/148 (28%), Positives = 48/148 (32%), Gaps = 25/148 (16%)

Query: 4    GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
            GP   AGA   AG R A     P G         +     H   PG P            
Sbjct: 1068 GPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAP--------- 1118

Query: 64   LATPEPA-RAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAA 122
              +P PA +  +I  PGP  P     P   PG  G +G      P+           P  
Sbjct: 1119 -GSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSG---HPGPIG----------PPG 1164

Query: 123  PISLRWRSGREARPGGP-QAGRAGDPKA 149
            P   R   G E  PG P Q G  G P A
Sbjct: 1165 PRGNRGERGSEGSPGHPGQPGPPGPPGA 1192



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 55/199 (27%), Positives = 68/199 (34%), Gaps = 47/199 (23%)

Query: 60  GSSCLATPEPARAPS-----------IAEPG-PGIPVAAAKPGVLPGGGGCTGARTENPP 107
           G  C   P+P  AP+             +PG PGIP     PG+ PG  G  G  +  PP
Sbjct: 82  GECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGI-PGQPGSPG--SPGPP 138

Query: 108 LSPTRGDCRVPVPAAPISLRWR-SGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPP 166
                G C    P  P +   +    + + G    G AG P         PA  P   PP
Sbjct: 139 -----GICE-SCPTGPQNYSPQYDSYDVKSGVAVGGLAGYP--------GPAGPP--GPP 182

Query: 167 SVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPW 226
                 PPG S   P SP        P   G+A         G    P  P  +    P 
Sbjct: 183 G-----PPGTS-GHPGSPGSPGYQGPPGEPGQA---------GPSGPPGPPGAIGPSGPA 227

Query: 227 LEVSSSGRGGPGRGQGLAG 245
            +   SGR G    +GL G
Sbjct: 228 GKDGESGRPGRPGERGLPG 246



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 43/148 (29%), Positives = 51/148 (34%), Gaps = 20/148 (13%)

Query: 4   GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
           GP+ + GA    G R       P G P     T  +  P    P G    + P       
Sbjct: 582 GPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPP-GPQGL 640

Query: 64  LATPEPARAPSI-AEPG-PGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPA 121
              P     P    +PG PG    A  PG  PGG G  GA  E  P          P  A
Sbjct: 641 QGLPGTGGPPGENGKPGEPGPKGDAGAPGA-PGGKGDAGAPGERGP----------PGLA 689

Query: 122 APISLRWRSGREARPGGPQAGR--AGDP 147
               LR  +G    P GP+ G+  AG P
Sbjct: 690 GAPGLRGGAG----PPGPEGGKGAAGPP 713



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 67/259 (25%), Positives = 79/259 (30%), Gaps = 43/259 (16%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHS-RRHPDHAPPPGRP----SCSRP 56
           GL   P    GAG       +  A P GP   A T   +  P      G P        P
Sbjct: 687 GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEP 746

Query: 57  LCAGSSCLATPEPARAPS--IAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGD 114
              G+  +   +  R P+  I  PGP         G  PG  G  G R      SP  G+
Sbjct: 747 GGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRG-----SP--GE 799

Query: 115 CRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP 174
                P  P       G+   PGG     A   K +              PP V    P 
Sbjct: 800 RGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGG------------PPGVA-GPPG 846

Query: 175 GNSRARPHSPH--LGTRARCPCGCGEARRSALQQLHG-----GGNRPSAPSRVAVEDPWL 227
           G+  A P  P    G R   P G G A     + L G     G   P  PS    +D   
Sbjct: 847 GSGPAGPPGPQGVKGERG-SPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKD--- 902

Query: 228 EVSSSGRGGPGRGQGLAGS 246
                G  GP    G  GS
Sbjct: 903 -----GPPGPAGNTGAPGS 916



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 6/68 (8%)

Query: 4    GPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRR------HPDHAPPPGRPSCSRPL 57
            GPR   G     G+   +    P G P        R       HP    PPG P    P 
Sbjct: 1137 GPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPC 1196

Query: 58   CAGSSCLA 65
            C G    A
Sbjct: 1197 CGGVGAAA 1204


>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 70/239 (29%), Positives = 83/239 (34%), Gaps = 34/239 (14%)

Query: 18  RPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLC------AGSSCLATPEPAR 71
           RP  +   P      +     R    ++ P  R S    LC      A +   A P  A 
Sbjct: 5   RPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAE 64

Query: 72  APSIAEPGPGIPVAAAKPGVLPGGGGCTG--------ARTENPPLSPTRGDCRVPVPAAP 123
           +P   E  P  P  A  PG   GGGGC          A+ E    +    D    V AAP
Sbjct: 65  SPDTPEEPPEEPAPAIAPG--GGGGGCGAQHWAAGRRAQREQGAGAAVLADFG-HVRAAP 121

Query: 124 ISLRWR--SGREARPGGPQAGRAGDPKADQA---MHLQPAWAPKLQPPSVCRQQPPGNSR 178
             LR R    R    GG  AGRA  P  D+A     L    AP+L  P V    PP  + 
Sbjct: 122 SGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPV----PPSVAH 177

Query: 179 ARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGP 237
               S  LG R   P G    R S          R S+P R A       +   GRG P
Sbjct: 178 VARASAGLGARP-VPGGPAGPRES-------WARRTSSPPRGAAGGGRPFLHPGGRGDP 228


>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 54/220 (24%), Positives = 76/220 (34%), Gaps = 25/220 (11%)

Query: 74  SIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPP-LSPTRGDCRVPVPAAPISLRWRSGR 132
           S   P P  P    + G +P  G         PP  +P R   R P P       W++ R
Sbjct: 86  STEAPAPAGPGTTRRAGHMPASGQVEARNDHRPPGRAPPRHAPRFPRPRMRFPQAWKASR 145

Query: 133 EARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ---PPSVCRQQPPGNSRARPHSPHLGTR 189
              P G  A R             P W P  +   PP   R Q P  S   P     G  
Sbjct: 146 AKEPRGLPAQR-------------PTWGPGTRSRGPPRQARSQHPERS---PEPEGRGNH 189

Query: 190 ARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQAR 249
           AR P       R  ++ + GG    S P   ++    L  +  GR    R   +  ++ R
Sbjct: 190 ARKPAALPVPGRFPIRPVLGG---RSGPGDRSLRSAHLGGAGQGRPWTARPPPIPHTRPR 246

Query: 250 GTRDPEAAQAMLHHLGAQLQAPGNFQAG-WRAQPRRTGAR 288
             +   +A     +LG ++    +  +G W   PR T AR
Sbjct: 247 -PKCACSAPGTNRNLGPRVAGANHSASGVWAVSPRVTRAR 285


>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 64/258 (24%), Positives = 87/258 (33%), Gaps = 37/258 (14%)

Query: 36  THSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGG 95
           TH    PD    P     S     G S       A AP+ A PG        + G +P  
Sbjct: 60  THPEGFPDQPLIPATEPQSSTTFPGLS-------AEAPAPAGPG-----TTRRAGHMPAS 107

Query: 96  GGCTGARTENPP-LSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMH 154
           G         PP  +P R   R P P       W++ R   P G  A R           
Sbjct: 108 GQVEARNDHRPPGRAPPRHAPRFPRPRMRFPQAWKASRAKEPRGLPAQR----------- 156

Query: 155 LQPAWAPKLQ---PPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGG 211
             P W P  +   PP   R Q P  S   P     G  AR P       R  ++ + GG 
Sbjct: 157 --PTWGPGTRSRGPPRRARSQHPERS---PEPEGRGNHARKPAALPVPGRFPIRPVLGG- 210

Query: 212 NRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAMLHHLGAQLQAP 271
              S P   ++    L  +  GR    R   +  ++ R  +   +A     +LG ++   
Sbjct: 211 --RSGPGDRSLRSAHLGGAGQGRPWTARPPPIPHTRPR-PKCACSAPGTNRNLGPRVAGA 267

Query: 272 GNFQAG-WRAQPRRTGAR 288
            +  +G W   PR T AR
Sbjct: 268 NHSASGVWAVSPRVTRAR 285


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 58/194 (29%), Positives = 71/194 (36%), Gaps = 39/194 (20%)

Query: 24  VAPPG---GPXSLARTHSRRHPDHAPPPGR-------------PSCSRP--LCAGSSCLA 65
           +APP     P SL        P  APPP +             P C  P  L A  S L 
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLT 577

Query: 66  TPEPARAPSIAEPGPGIPVAAAKPGV--LPGGGGCTGARTENPPLSPTRGDCRVPVPAAP 123
           TP P    SIA P P  P A A P +  LP           +PPLSP       P P AP
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPLQGLP-----------SPPLSP----LATPPPQAP 622

Query: 124 --ISLRWRSGREARPGGPQAG--RAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRA 179
             ++L       + P  P         P+A  A+ +    AP   PPS   Q P     +
Sbjct: 623 PXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682

Query: 180 RPHSPHLGTRARCP 193
            P SP     ++ P
Sbjct: 683 PPVSPSATPPSQAP 696



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 58/228 (25%), Positives = 75/228 (32%), Gaps = 39/228 (17%)

Query: 10  GAGAGAGRRPAARQV-----------APPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLC 58
           GA    GR+P A +            AP  GP   A T SR      P  GR   + P  
Sbjct: 48  GAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPP-A 106

Query: 59  AGSSCLATPEPARAPSIAEPGP----GIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGD 114
             +S      P RA     PGP    G+ ++A +       G  T A   +   +  R D
Sbjct: 107 KNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE---TVARGKATEAPKRSALSAGARRD 163

Query: 115 CRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP 174
              P P  P        R +R  G + G              P  AP  +P         
Sbjct: 164 TSGPTPGTPSP---AMARRSRAAGTEVG-------------LPRPAPSARPRPPTEGPRK 207

Query: 175 GNSRARPHS---PHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSR 219
             S A  HS   P    R R P   G  +R A + L       S+P+R
Sbjct: 208 SVSSASEHSTTEPSPAARRR-PSAGGGLQRPASRSLSSSATPLSSPAR 254



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 47/171 (27%), Positives = 61/171 (35%), Gaps = 30/171 (17%)

Query: 19  PAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP 78
           P+     PP  P S+A    +  P  A PP +   S PL    S LATP P   P +A  
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPL----SPLATPPPQAPPXLA-- 626

Query: 79  GPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAP--ISLRWRSGREARP 136
              +P   A P               +PP SP       P P AP  +++       + P
Sbjct: 627 ---LPPLQAPP---------------SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668

Query: 137 GGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR---QQPPGNSRARPHSP 184
             P       P A   +    A  P   PPS+     Q PP    + P SP
Sbjct: 669 PSPPVQAPFSPPASPPVS-PSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 718



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 72/286 (25%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 26   PPGGPXSLARTHSRRHPDHAPP---------------------PGRPSCSRPLCAGSSCL 64
            PP  P SL  +   + P  APP                     P  PS S P+    S L
Sbjct: 769  PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM----SPL 824

Query: 65   ATPEPARAPSIAEP-------GPGIPVAAAK-------PGVLPGGGGCTGARTENPPLSP 110
            ATP P   P +A P        P  P   A        P     G   T A    PP  P
Sbjct: 825  ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 884

Query: 111  TRGDCRV---PVPAAPISLRWRSGREAR--PGGPQAGRAGDPKAD---QAMHLQPAWAPK 162
            +R        P  A   S    +  E R    GP+ G A  P  D    A H   AW+  
Sbjct: 885  SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH-PAAWSRG 943

Query: 163  LQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAV 222
              PP   R  P             G     P   G      L  ++      SA      
Sbjct: 944  PAPPLAFRGAP-------------GAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA 990

Query: 223  EDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAMLHHLGAQL 268
             DP     +SG G    G G AG+ +R  +     +  L  L A +
Sbjct: 991  LDPGPSPGTSG-GKAAAGAG-AGASSRSPKQARLGELPLGALQASV 1034



 Score = 37.0 bits (84), Expect = 0.021
 Identities = 47/167 (28%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 19  PAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP 78
           PA+  V+P   P S A       P  A PP +   S P     S  ATP P   P +A P
Sbjct: 680 PASPPVSPSATPPSQAP------PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 733

Query: 79  GPGIPVA-AAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPG 137
              +P +  A P + P       + T  P + P      + VP +P +        + P 
Sbjct: 734 PLQVPPSPPASPPMSP-------SATPPPRVPPLLAAPPLQVPPSPPA--------SLPM 778

Query: 138 GPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSP 184
            P A     P+A  A+   P  A    P S   Q P   S + P SP
Sbjct: 779 SPLA--KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 54/206 (26%), Positives = 69/206 (33%), Gaps = 65/206 (31%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPG---------GPXSLARTHSRRHPDHAPPPGRPSCSRP 56
           RPSAG G    +RPA+R ++            GP +     +  HP    P G  +   P
Sbjct: 227 RPSAGGGL---QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 283

Query: 57  LCA-------------GSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGART 103
                            SS LATP P+   +   P P    A   P  LP          
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD-NAATPLPATLP---------- 332

Query: 104 ENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKL 163
            +PPL+        P+P AP S             P A     P + Q +   PA  P  
Sbjct: 333 PSPPLA-------TPLPLAPPS-------------PSA-----PPSLQTLPSPPATPPSQ 367

Query: 164 QPPSVC---RQQPPGNSRARP-HSPH 185
            PPS+     Q PP      P   PH
Sbjct: 368 APPSMTTPPMQAPPSLQTIPPIQVPH 393



 Score = 32.0 bits (71), Expect = 0.66
 Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 6/132 (4%)

Query: 146 DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQ 205
           D K D+A     A  P  + P +   +PPG+   RP  P      R     G   R  L 
Sbjct: 2   DNKRDKAKAGAAARTPAARAPGLLTPRPPGS--PRPPPPVTPAALRVLGAAGAVGRKPLA 59

Query: 206 QLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAMLHHLG 265
           +  GG    + P       P     +S R    R      +  RG R P A       + 
Sbjct: 60  ERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR----PPASGRGERAPPAKNTSPGPVS 115

Query: 266 AQLQAPGNFQAG 277
           +  +A G  + G
Sbjct: 116 SPGRASGTTRPG 127


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 57/223 (25%), Positives = 79/223 (35%), Gaps = 43/223 (19%)

Query: 6   RPSAGAGAGAGRRPAARQVAPPG---------GPXSLARTHSRRHPDHAPPPGRPSCSRP 56
           RPSAG G    +RPA+R ++            GP +     +  HP    P G  +   P
Sbjct: 218 RPSAGGGL---QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 274

Query: 57  LCA-------------GSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGG------- 96
                            SS LATP P+  PS + P P +    + P   P          
Sbjct: 275 QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP-PSLQTLPSPPATPPSQATTSLGSP 333

Query: 97  --GCTGARTENPPLSPTRGDCRVPVPAAP--ISLRWRSGREARPGGPQAG--RAGDPKAD 150
               T +   +PPLSP       P P AP  ++L       + P  P         P+A 
Sbjct: 334 TLQATHSFLPSPPLSP----LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAP 389

Query: 151 QAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCP 193
            A+ +    AP   PPS   Q P     + P SP     ++ P
Sbjct: 390 NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 432



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 57/227 (25%), Positives = 74/227 (32%), Gaps = 46/227 (20%)

Query: 10  GAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP-- 67
           GA    GR+P A +    GG            P+ AP  G    SRP  +G    A P  
Sbjct: 48  GAAGAVGRKPLAERAGGIGGATI---------PESAPRAGPTRTSRPPASGRGERAPPAK 98

Query: 68  --------EPARAPSIAEPGP----GIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDC 115
                    P RA     PGP    G+ ++A +       G  T A   +   +  R D 
Sbjct: 99  NTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE---TVARGKATEAPKRSALSAGARRDT 155

Query: 116 RVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPG 175
             P P  P        R +R  G + G              P  AP  +P          
Sbjct: 156 SGPTPGTPSP---AMARRSRAAGTEVG-------------LPRPAPSARPRPPTEGPRKS 199

Query: 176 NSRARPHS---PHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSR 219
            S A  HS   P    R R P   G  +R A + L       S+P+R
Sbjct: 200 VSSASEHSTTEPSPAARRR-PSAGGGLQRPASRSLSSSATPLSSPAR 245



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 54/182 (29%), Positives = 64/182 (35%), Gaps = 43/182 (23%)

Query: 26  PPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIA--------E 77
           PP  P +LA       P  APP   P  S PL    S LATP P    ++A         
Sbjct: 354 PPQAPPALALP-----PLQAPPS--PPASPPL----SPLATPSPQAPNALAVHLLQAPFS 402

Query: 78  PGPGIPVAA-----AKPGVLPGGGGCTGARTE----------NPPLSPTRGDCRVPVPAA 122
           P P  PV A     A P V P     + A             +PP SP       P P A
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462

Query: 123 PISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPH 182
           P  L     + A+P          P+A  A+   P  A    P S   Q P   S + P 
Sbjct: 463 PPPLAAPPLQLAKP---------PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM 513

Query: 183 SP 184
           SP
Sbjct: 514 SP 515



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 49/176 (27%), Positives = 60/176 (34%), Gaps = 30/176 (17%)

Query: 19  PAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP 78
           PA+  V+P   P S A       P  A PP +   S P     S  ATP P   P +A P
Sbjct: 416 PASPPVSPSATPPSQAP------PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469

Query: 79  GPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGG 138
               P+  AKP         T      PPL          +P+ P S   ++     P  
Sbjct: 470 ----PLQLAKPPPQAPPALAT------PPLQ--------ALPSPPASFPGQA-----PFS 506

Query: 139 PQAGRAGDPKADQAMHLQPAW-APKLQPPSVCRQQPPGNSRARPHSPHLGTRARCP 193
           P A     P A       P   AP LQ P      P   +  RP +P   T    P
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP 562



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 34/132 (25%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 146 DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQ 205
           D K D+A     A  P  + P +   +PPG+   RP  P      R     G   R  L 
Sbjct: 2   DNKRDKAKAGAAARTPAARAPGLLTPRPPGS--PRPPPPVTPAALRVLGAAGAVGRKPLA 59

Query: 206 QLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAMLHHLG 265
           +  GG    + P             S+ R GP R      S  RG R P A       + 
Sbjct: 60  ERAGGIGGATIP------------ESAPRAGPTRTSRPPAS-GRGERAPPAKNTSPGPVS 106

Query: 266 AQLQAPGNFQAG 277
           +  +A G  + G
Sbjct: 107 SPGRASGTTRPG 118


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 67/270 (24%), Positives = 86/270 (31%), Gaps = 35/270 (12%)

Query: 14   GAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPP--GRPSCSRPLCAGSSCLATPEPAR 71
            GA   PAA   +P GGP + +   +   P   PP   G P+   P  A     ATP   +
Sbjct: 1055 GAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114

Query: 72   APSIAEPGPGIPVAAAKPGVLPGGGGCT-------------------GARTENPPLSPTR 112
                  P  G P   A     P GG  T                   G  T  P  +PT 
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174

Query: 113  GDCRVPVPAAPISLRWRSGR----EARPGGPQAGRA-GDPKADQAMHLQPAWAPKLQPPS 167
                 P P   ++     G      A P  P+ G A   PK           +PK    +
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234

Query: 168  VCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWL 227
               +  P    A P SP  G     P G      +    L GG    + P      +P +
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG---LATPPHKGAPNPAV 1291

Query: 228  EVSSSGRGGPGRGQGLAGSQARGTRDPEAA 257
                S +GGP      A S  +G   P AA
Sbjct: 1292 VTPPSPKGGP------ATSPPKGAPTPPAA 1315



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 53/212 (25%), Positives = 70/212 (33%), Gaps = 34/212 (16%)

Query: 7    PSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPP--------------PGRPS 52
            P++ +  GA   PAA   +P GGP + +   +   P   PP              P  P+
Sbjct: 931  PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990

Query: 53   CSRPLCAGSSCLATPEPARA---PSIAEPGP-GIPV-------AAAKPGVLPGGGGCTGA 101
             + P   G    ATP P  A   P++  P P G P        A+  P   P     + A
Sbjct: 991  ATPPSPKGGP--ATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA 1048

Query: 102  RTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAP 161
             T  P  +PT     +P P    +     G    P        G P         P  AP
Sbjct: 1049 ATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP-----SPKGAP 1103

Query: 162  KLQPPSVCRQQPPGNSRARPHSPHLGTRARCP 193
               PP+     P G     PH     T A  P
Sbjct: 1104 --MPPAATPPSPKGGLATPPHKGAPTTPAATP 1133



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 63/238 (26%), Positives = 76/238 (31%), Gaps = 25/238 (10%)

Query: 42   PDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP-GPGIPVAAAKPGVLPGGGGCTG 100
            P    P   P+ S    +     ATP P   P+   P G   P AA  P   P G    G
Sbjct: 900  PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPS--PKG----G 953

Query: 101  ARTENPPLSPTRGDCRVPV----PAAPISLRWRSGREARPGGPQAGRA-----GDPKADQ 151
              T +P  +PT      P     PA P      +   A P  P+ G A     G P    
Sbjct: 954  PATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPA 1013

Query: 152  AMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRAR-CPCGCGEARRSALQQLHGG 210
                 P  +P   P       PP    A P SP     A   P G      + L    GG
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPA---ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGG 1070

Query: 211  GNRPSAPSRVAVEDPWLEVSSSGRGGPG--RGQGLAGSQARGTRDPEAAQAMLHHLGA 266
               P+ PS      P      S +GGP     +G     A     P+   A   H GA
Sbjct: 1071 ---PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGA 1125



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 48/174 (27%), Positives = 61/174 (35%), Gaps = 23/174 (13%)

Query: 5    PRPSAGAGA----GAGRRPAARQVAPPGGPXSLARTHSRRHPDHA-----PPPGRPSCSR 55
            P P  G       GA   PAA    PP     LA    +  P+ A      P G P+ S 
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAA---TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP 1305

Query: 56   PLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGART---ENPPLSPTR 112
            P  A +   ATP   +      P  G P   A     P G     A T   +  P +P+ 
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365

Query: 113  GDCRVPVPAAPISLRWRSGREARPGGPQAGRA-----GDPKADQAMHLQPAWAP 161
             +   P  A P     + G    P  P+ G A     GDP +   + L P  AP
Sbjct: 1366 KEGPTPPAATP---SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAP 1416



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 36   THSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGP---------GIPVAA 86
            +HS + P  APP  +   S PL A +     P+P  A   A P P          +P   
Sbjct: 1755 SHSPKGP-LAPPESK--ASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLP 1811

Query: 87   AKPGVLPGGGGCTGARTENPPLSPTRGDCRVP-VPAAPIS 125
             K   LP   G     + + PL+P   D  +P +P  PIS
Sbjct: 1812 PKQQFLPSSPGLV-LESPSKPLAPADEDELLPLIPPEPIS 1850


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 74/291 (25%), Positives = 102/291 (35%), Gaps = 29/291 (9%)

Query: 2   GLGPRPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGS 61
           GL   P+  +G+   RRP     A   GP    RT   R         R +     CAGS
Sbjct: 64  GLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGS 123

Query: 62  SCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCR----- 116
           +    P P+ A S   P P   +          GGG  G  + + P + T G  R     
Sbjct: 124 A----PAPSGAQSCGGPAPASALRRPLTQWDASGGG--GRASHSGPRAGTPGGGRSSRAG 177

Query: 117 ----VPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWA--PKLQPPSVCR 170
                P+   P+ LR  S R  +  G   G +G P   +A+  +   A   + Q     +
Sbjct: 178 ARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEK 237

Query: 171 QQPPGNSRARPHSPHL----GTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPW 226
           +  PG++   P S  L    GTRAR   G    R SA      G      PSR     P 
Sbjct: 238 RACPGST--LPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPGKPA 295

Query: 227 LEVSS------SGRGGPGRGQGLAGSQARGTRDPEAAQAMLHHLGAQLQAP 271
              S+       G GG G  Q +   +  G        A+    G++   P
Sbjct: 296 PRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP 346



 Score = 36.2 bits (82), Expect = 0.035
 Identities = 65/257 (25%), Positives = 82/257 (31%), Gaps = 54/257 (21%)

Query: 8   SAGAGA---GAGRRPAARQVAPPGGPXS-LARTHSRRHPDHAPPPGRPSCSRPLCAGSSC 63
           +AGA A   G+ +R       PP    +    T +R H        R   S P    +  
Sbjct: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQ----RQRFSAPSSHSTGA 280

Query: 64  LATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAP 123
              P P+RA     PG   P  +A P  L GGGG +G       +   RG          
Sbjct: 281 RTLPTPSRA----RPGKPAPRGSAPPARLRGGGGGSGL---TQLVGSGRGSGVTHSVGTH 333

Query: 124 ISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHS 183
                R  R  RP G   G           H +P  +P         Q PP +   R   
Sbjct: 334 ALATRRGSRAPRPVGVLRG---------VPHFRPLSSP-------APQSPPRSPSVRAFG 377

Query: 184 PHLGT-RARCPCGCGEARRSALQQLH---------------GGGNRPSAPSRVAVEDPWL 227
           P LG  R  CP     A    +  L                GGG++P A  R        
Sbjct: 378 PRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRA------- 430

Query: 228 EVSSSGRGGPGRGQGLA 244
           E    G G P R Q L+
Sbjct: 431 ERGKRGAGVPWRTQTLS 447


>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 673

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 65/252 (25%), Positives = 88/252 (34%), Gaps = 25/252 (9%)

Query: 32  SLARTHSR----RHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAA 87
           S++RT  R    R P  A P G+PS + P    S    T  P+ A          P    
Sbjct: 330 SISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASP-TGT 388

Query: 88  KPGVLPGGGGCTGARTENPP-LSPTRGDCRVPV-----PAAPISLRWRSGREARPGGPQA 141
            P   P G   T + T  PP  SPT    R  +      A+P     R+     P  P+A
Sbjct: 389 PPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTP--PRA 446

Query: 142 GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARP-HSPHLGTRARCPCGCGEAR 200
              G P        Q   +P   P +      P  S A P  SP   +  R P       
Sbjct: 447 SPTGTPSRASPTGTQSTASPTGSPSTASPTGSP--STASPTGSPSRASLTRTP------S 498

Query: 201 RSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAG-SQARGTRDPEAAQA 259
           R++L ++    +    PSR +    W   ++S  G P     +   S+A  TR P  A  
Sbjct: 499 RASLTKMESTASITRTPSRAS--PTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASL 556

Query: 260 MLHHLGAQLQAP 271
                 A L  P
Sbjct: 557 TRTPSRASLTTP 568



 Score = 34.7 bits (78), Expect = 0.10
 Identities = 42/161 (26%), Positives = 57/161 (35%), Gaps = 8/161 (4%)

Query: 32  SLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGV 91
           S  RT  R  P   PP   P+ +    + +   +T  P  +PS A P  G P + A P  
Sbjct: 429 SPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASP-TGSP-STASPTG 486

Query: 92  LPGGGGC--TGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKA 149
            P       T +R     +  T    R P  A+P    W     +  G P    A    +
Sbjct: 487 SPSRASLTRTPSRASLTKMESTASITRTPSRASP---TWTPSTASPTGSPSTALAMGSPS 543

Query: 150 DQAMHLQPAWAPKLQPPSVCRQQPPGN-SRARPHSPHLGTR 189
             A+   P+ A   + PS      P   S  R  S  L TR
Sbjct: 544 RAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTR 584



 Score = 28.5 bits (62), Expect = 7.3
 Identities = 18/60 (30%), Positives = 24/60 (40%)

Query: 19  PAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP 78
           P+   +       S+ RT SR  P   PP   P+ S P  + S   +T    R P  A P
Sbjct: 197 PSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASP 256


>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 67/262 (25%), Positives = 85/262 (32%), Gaps = 45/262 (17%)

Query: 36  THSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGG 95
           TH    PD    P     S     G S       A AP+ A PG        + G +P  
Sbjct: 60  THPEGFPDQPLIPATEPQSSTTFPGLS-------AEAPAPAGPG-----TTRRAGHMPAS 107

Query: 96  GGCTGARTENPP-LSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRAGDPKADQAMH 154
           G         PP  +P R   R P P       W++ R   P G  A R           
Sbjct: 108 GQVEARNDHRPPGRAPPRHAPRFPRPRMRFPQAWKASRAKEPRGLPAQR----------- 156

Query: 155 LQPAWAPKLQ---PPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGG 211
             P W P  +   PP   R Q P  S   P     G  AR P       R  ++ + GG 
Sbjct: 157 --PTWGPGTRSRGPPRRARSQHPERS---PEPEGRGNHARKPAALPVPGRFPIRPVLGGR 211

Query: 212 NRPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRD-PEAA---QAMLHHLGAQ 267
           + P         D  L  +  G  G GR           TR  P+ A        +LG +
Sbjct: 212 SGPG--------DRSLRSAHLGGAGQGRPWTARPPPIPHTRPRPKCACSTPGTNRNLGPR 263

Query: 268 LQAPGNFQAG-WRAQPRRTGAR 288
           +    +  +G W   PR T AR
Sbjct: 264 VAGANHSASGVWAVSPRVTRAR 285


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 52/153 (33%), Positives = 62/153 (40%), Gaps = 15/153 (9%)

Query: 44  HAPPPGRPSCSRPLCAGSSCLATPEPAR---APSIAEPGPGIPVAAAKP-GVLPGGGG-- 97
           H P P +     P  A  + L++   A    AP    P  G P   A P G LPGG    
Sbjct: 13  HCPWPRQQPALWPTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPGGRTAR 72

Query: 98  -CTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGP--QAGRAGDPKADQAMH 154
            C+G R   PP  P+R     P P AP S   R GR AR GGP  +A  AG         
Sbjct: 73  WCSG-RARRPPPQPSRP---APPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQ 128

Query: 155 LQPAWAPKL--QPPSVCRQQPPGNSRARPHSPH 185
           L P  A  L  +   + R +    S  R  SPH
Sbjct: 129 LVPVRALGLGHRSDELVRFRFCSGSCRRARSPH 161


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 52/153 (33%), Positives = 62/153 (40%), Gaps = 15/153 (9%)

Query: 44  HAPPPGRPSCSRPLCAGSSCLATPEPAR---APSIAEPGPGIPVAAAKP-GVLPGGGG-- 97
           H P P +     P  A  + L++   A    AP    P  G P   A P G LPGG    
Sbjct: 13  HCPWPRQQPALWPTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPGGRTAR 72

Query: 98  -CTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGP--QAGRAGDPKADQAMH 154
            C+G R   PP  P+R     P P AP S   R GR AR GGP  +A  AG         
Sbjct: 73  WCSG-RARRPPPQPSRP---APPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQ 128

Query: 155 LQPAWAPKL--QPPSVCRQQPPGNSRARPHSPH 185
           L P  A  L  +   + R +    S  R  SPH
Sbjct: 129 LVPVRALGLGHRSDELVRFRFCSGSCRRARSPH 161


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.135    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,246,941
Number of Sequences: 37866
Number of extensions: 1329337
Number of successful extensions: 11363
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 1355
Number of HSP's that attempted gapping in prelim test: 8358
Number of HSP's gapped (non-prelim): 3597
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.