Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239757956

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757956 PREDICTED: similar to CYorf16 protein [Homo
sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]     467   e-132
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]           344   3e-95
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ...   344   3e-95
gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]     342   1e-94
gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo ...   224   4e-59
gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo ...   224   4e-59
gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo ...   224   4e-59
gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo ...   224   4e-59
gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo ...   224   4e-59
gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]     221   3e-58
gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo ...   178   3e-45
gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]     174   7e-44
gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo ...   174   7e-44
gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]     157   5e-39
gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]           157   5e-39
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro...    62   4e-10
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]        61   7e-10
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ...    61   7e-10
gi|239747006 PREDICTED: similar to testis specific protein, Y-li...    61   7e-10
gi|239746992 PREDICTED: similar to testis specific protein, Y-li...    61   7e-10
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]        61   7e-10
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]        61   7e-10
gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo ...    42   4e-04
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...    40   0.002
gi|11545835 TSPY-like 2 [Homo sapiens]                                 36   0.023
gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo sa...    36   0.030
gi|46094051 TSPY-like 4 [Homo sapiens]                                 36   0.030
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi...    34   0.088
gi|59933284 RUN domain containing 2B [Homo sapiens]                    34   0.11 
gi|49410495 TSPY-like 5 [Homo sapiens]                                 34   0.11 

>gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 223

 Score =  467 bits (1202), Expect = e-132
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF 60
           MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF
Sbjct: 1   MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF 60

Query: 61  AGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 120
           AGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS
Sbjct: 61  AGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 120

Query: 121 RCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDSHLQ 180
           RCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDSHLQ
Sbjct: 121 RCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDSHLQ 180

Query: 181 ENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 223
           ENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS
Sbjct: 181 ENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 223


>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 357

 Score =  344 bits (883), Expect = 3e-95
 Identities = 164/168 (97%), Positives = 165/168 (98%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  GRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 190 VRLGSLGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 249

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ
Sbjct: 250 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 309

Query: 176 DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 223
           DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS
Sbjct: 310 DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 357


>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
           sapiens]
          Length = 357

 Score =  344 bits (883), Expect = 3e-95
 Identities = 164/168 (97%), Positives = 165/168 (98%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  GRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 190 VRLGSLGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 249

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ
Sbjct: 250 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 309

Query: 176 DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 223
           DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS
Sbjct: 310 DSHLQENFDQSSLSLEIGMGLLMFHPYCEDTVRWNPDPLGESAIKLFS 357


>gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 185

 Score =  342 bits (878), Expect = 1e-94
 Identities = 166/182 (91%), Positives = 171/182 (93%), Gaps = 5/182 (2%)

Query: 1   MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF 60
           MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF
Sbjct: 1   MSGRWPCSTLSVFLRNCKASRGLPTQSSGEFLRRGRLFGTRDVGVGRKACGSPALLRDGF 60

Query: 61  AGR-----WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           AG+     WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 61  AGQAGEPGWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 120

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 121 EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 180

Query: 176 DS 177
           DS
Sbjct: 181 DS 182


>gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo
           sapiens]
          Length = 145

 Score =  224 bits (572), Expect = 4e-59
 Identities = 107/122 (87%), Positives = 112/122 (91%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 21  VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 81  EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140

Query: 176 DS 177
           DS
Sbjct: 141 DS 142


>gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo
           sapiens]
          Length = 145

 Score =  224 bits (572), Expect = 4e-59
 Identities = 107/122 (87%), Positives = 112/122 (91%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 21  VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 81  EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140

Query: 176 DS 177
           DS
Sbjct: 141 DS 142


>gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo
           sapiens]
          Length = 145

 Score =  224 bits (572), Expect = 4e-59
 Identities = 107/122 (87%), Positives = 112/122 (91%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 21  VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 81  EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140

Query: 176 DS 177
           DS
Sbjct: 141 DS 142


>gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo
           sapiens]
          Length = 145

 Score =  224 bits (572), Expect = 4e-59
 Identities = 107/122 (87%), Positives = 112/122 (91%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 21  VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 81  EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140

Query: 176 DS 177
           DS
Sbjct: 141 DS 142


>gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo
           sapiens]
          Length = 145

 Score =  224 bits (572), Expect = 4e-59
 Identities = 107/122 (87%), Positives = 112/122 (91%)

Query: 56  LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
           +R G  G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 21  VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80

Query: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
           EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 81  EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140

Query: 176 DS 177
           DS
Sbjct: 141 DS 142


>gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 152

 Score =  221 bits (564), Expect = 3e-58
 Identities = 108/135 (80%), Positives = 114/135 (84%), Gaps = 6/135 (4%)

Query: 43  VGVGRKACGSPALLRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYR 102
           V +G   CG   +        WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYR
Sbjct: 21  VRLGSWVCGRSPV------SEWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYR 74

Query: 103 VSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGK 162
           VSHSTAVQRFWDHEGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK +
Sbjct: 75  VSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQ 134

Query: 163 SLGSLQPLPPASQDS 177
           +L SLQPLPPAS+DS
Sbjct: 135 TLRSLQPLPPASKDS 149


>gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo
           sapiens]
          Length = 228

 Score =  178 bits (452), Expect = 3e-45
 Identities = 89/126 (70%), Positives = 100/126 (79%), Gaps = 1/126 (0%)

Query: 53  PALLRDGFAGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQR 111
           P   R G +GRWRN+AI VTG R  I FH NLYFH+E+I++E+CVGI GYRVSHSTAV R
Sbjct: 98  PCSCRFGMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHR 157

Query: 112 FWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLP 171
           FWD EGQAS CRQ  +YLSLFS LAEHDCLGFG I+EMESH V QAGVK   LGSLQ LP
Sbjct: 158 FWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLP 217

Query: 172 PASQDS 177
           P+ +DS
Sbjct: 218 PSFKDS 223


>gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 140

 Score =  174 bits (440), Expect = 7e-44
 Identities = 86/118 (72%), Positives = 97/118 (82%), Gaps = 1/118 (0%)

Query: 61  AGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQA 119
           +GRWRN+AI VTG R  I FH NLYFH+E+I++E+CVGI GYRVSHSTAV RFWD EGQA
Sbjct: 18  SGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQA 77

Query: 120 SRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDS 177
           S CRQ  +YLSLFS LAEHDCLGFG I+EMESH V QAGVK   LGSLQ LPP+ +DS
Sbjct: 78  SSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135


>gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo
           sapiens]
          Length = 140

 Score =  174 bits (440), Expect = 7e-44
 Identities = 86/118 (72%), Positives = 97/118 (82%), Gaps = 1/118 (0%)

Query: 61  AGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQA 119
           +GRWRN+AI VTG R  I FH NLYFH+E+I++E+CVGI GYRVSHSTAV RFWD EGQA
Sbjct: 18  SGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQA 77

Query: 120 SRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDS 177
           S CRQ  +YLSLFS LAEHDCLGFG I+EMESH V QAGVK   LGSLQ LPP+ +DS
Sbjct: 78  SSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135


>gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 217

 Score =  157 bits (398), Expect = 5e-39
 Identities = 80/114 (70%), Positives = 91/114 (79%), Gaps = 2/114 (1%)

Query: 62  GRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 120
           G+ RNSAIP TGGR+  SFH NLYFH+E+ ++E+C+GILGYR SHSTAVQ  WDHEGQAS
Sbjct: 103 GKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQAS 162

Query: 121 RCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPAS 174
            CRQYTSYLS FS LA+ DC G GRI E ESH V QAGVK + LGS QP PPA+
Sbjct: 163 SCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQP-PPAT 215


>gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score =  157 bits (398), Expect = 5e-39
 Identities = 80/114 (70%), Positives = 91/114 (79%), Gaps = 2/114 (1%)

Query: 62  GRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 120
           G+ RNSAIP TGGR+  SFH NLYFH+E+ ++E+C+GILGYR SHSTAVQ  WDHEGQAS
Sbjct: 103 GKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQAS 162

Query: 121 RCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPAS 174
            CRQYTSYLS FS LA+ DC G GRI E ESH V QAGVK + LGS QP PPA+
Sbjct: 163 SCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQP-PPAT 215


>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
           protein 1 [Homo sapiens]
          Length = 308

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYLDYEVEAYRRRHHNSSLNFFNWF 261

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275


>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
          Length = 308

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 261

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275


>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
           sapiens]
          Length = 308

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 261

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275


>gi|239747006 PREDICTED: similar to testis specific protein,
           Y-linked 3 [Homo sapiens]
          Length = 314

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 208 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 267

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 268 SDHNFAGSNKIAEI 281


>gi|239746992 PREDICTED: similar to testis specific protein,
           Y-linked 1 [Homo sapiens]
          Length = 314

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 208 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 267

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 268 SDHNFAGSNKIAEI 281


>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
          Length = 308

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 261

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275


>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
          Length = 308

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query: 76  MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCL 135
           M+ F  N YF +++I KE+ V I  YR SHST ++ + D+E +A R R + S L+ F+  
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 261

Query: 136 AEHDCLGFGRIAEM 149
           ++H+  G  +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275


>gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo
           sapiens]
          Length = 344

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 124 QYTSYLSLFSCLAEHDCLGFGRIAEMES 151
           +Y+SYLS FS LA+HDC G GRIAE+ +
Sbjct: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343


>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
           sapiens]
          Length = 165

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/28 (64%), Positives = 21/28 (75%)

Query: 145 RIAEMESHCVIQAGVKGKSLGSLQPLPP 172
           +  EMES CV QAGV+ + LGSLQP PP
Sbjct: 23  KTCEMESRCVPQAGVQWRDLGSLQPPPP 50


>gi|11545835 TSPY-like 2 [Homo sapiens]
          Length = 693

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 25/71 (35%), Positives = 33/71 (46%)

Query: 79  FHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEH 138
           F  N YF + +I+KE      G  VSHST ++     E QA R     +  S FS  + H
Sbjct: 312 FQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNH 371

Query: 139 DCLGFGRIAEM 149
                 RIAE+
Sbjct: 372 SLPEADRIAEI 382


>gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo
           sapiens]
          Length = 322

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 137 EHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLP 171
           + DCL   + A+  SH V QAGV+  +LGSLQPLP
Sbjct: 254 DEDCLPASKKAKW-SHSVTQAGVQWHNLGSLQPLP 287


>gi|46094051 TSPY-like 4 [Homo sapiens]
          Length = 414

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 79  FHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQ--RFWDHEGQASRCRQYTSYLSLFSCLA 136
           F  N YF +E ++KE+     G  VS ST ++  R  D +    R R+  +  S F+  +
Sbjct: 300 FQGNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQDPQAHIHRNREGNTIPSFFNWFS 359

Query: 137 EHDCLGFGRIAEM 149
           +H  L F RIAE+
Sbjct: 360 DHSLLEFDRIAEI 372


>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
           sapiens]
          Length = 440

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 150 ESHCVIQAGVKGKSLGSLQPLPP 172
           +S  V QAGV+ ++LGSLQPLPP
Sbjct: 357 DSRSVAQAGVQWRNLGSLQPLPP 379


>gi|59933284 RUN domain containing 2B [Homo sapiens]
          Length = 249

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 15/22 (68%), Positives = 17/22 (77%)

Query: 151 SHCVIQAGVKGKSLGSLQPLPP 172
           +H V QAGV+   LGSLQPLPP
Sbjct: 225 AHSVTQAGVQWHDLGSLQPLPP 246


>gi|49410495 TSPY-like 5 [Homo sapiens]
          Length = 417

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 20/71 (28%), Positives = 34/71 (47%)

Query: 79  FHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEH 138
           F  N YF +++++KE+  G  G  VS ST +Q    H+ Q+       +  S F   + H
Sbjct: 298 FDRNPYFQNKVLIKEYGCGPSGQVVSRSTPIQWLPGHDLQSLSQGNPENNRSFFGWFSNH 357

Query: 139 DCLGFGRIAEM 149
             +   +I E+
Sbjct: 358 SSIESDKIVEI 368


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,066,986
Number of Sequences: 37866
Number of extensions: 394333
Number of successful extensions: 855
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 804
Number of HSP's gapped (non-prelim): 64
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press