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Search of human proteins with 239757810
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757810 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 3F [Homo sapiens]
(724 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757810 PREDICTED: similar to protein phosphatase 1, regula... 1483 0.0
gi|58761532 protein phosphatase 1, regulatory (inhibitor) subuni... 1369 0.0
gi|167614502 protein phosphatase 1, regulatory (inhibitor) subun... 80 7e-15
gi|153792466 protein phosphatase 1, regulatory (inhibitor) subun... 54 4e-07
gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun... 54 7e-07
gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo sa... 49 2e-05
gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit... 48 4e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 47 5e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 1e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 45 2e-04
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 44 7e-04
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 44 7e-04
gi|50962882 G patch domain containing 8 [Homo sapiens] 43 9e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 42 0.002
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 42 0.002
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 42 0.002
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 41 0.003
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 41 0.003
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 41 0.004
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 41 0.004
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 40 0.006
gi|28274705 family with sequence similarity 9, member A [Homo sa... 40 0.006
gi|169215908 PREDICTED: family with sequence similarity 108, mem... 40 0.008
gi|169215726 PREDICTED: family with sequence similarity 108, mem... 40 0.008
gi|239746656 PREDICTED: hypothetical protein LOC729495 [Homo sap... 40 0.008
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 39 0.013
gi|11415052 retinoid X receptor, beta [Homo sapiens] 39 0.017
gi|45504380 jumonji domain containing 2B [Homo sapiens] 39 0.022
>gi|239757810 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 3F [Homo sapiens]
Length = 724
Score = 1483 bits (3839), Expect = 0.0
Identities = 724/724 (100%), Positives = 724/724 (100%)
Query: 1 MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP 60
MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP
Sbjct: 1 MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP 60
Query: 61 GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS 120
GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS
Sbjct: 61 GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS 120
Query: 121 LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH 180
LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH
Sbjct: 121 LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH 180
Query: 181 VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT 240
VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT
Sbjct: 181 VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT 240
Query: 241 DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP 300
DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP
Sbjct: 241 DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP 300
Query: 301 QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ 360
QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ
Sbjct: 301 QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ 360
Query: 361 ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS
Sbjct: 361 ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
Query: 421 SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG 480
SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG
Sbjct: 421 SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG 480
Query: 481 EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG 540
EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG
Sbjct: 481 EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG 540
Query: 541 PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP 600
PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP
Sbjct: 541 PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP 600
Query: 601 EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA 660
EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA
Sbjct: 601 EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA 660
Query: 661 GVTESKSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSL 720
GVTESKSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSL
Sbjct: 661 GVTESKSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSL 720
Query: 721 AWFS 724
AWFS
Sbjct: 721 AWFS 724
>gi|58761532 protein phosphatase 1, regulatory (inhibitor) subunit
3F [Homo sapiens]
Length = 799
Score = 1369 bits (3543), Expect = 0.0
Identities = 665/665 (100%), Positives = 665/665 (100%)
Query: 1 MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP 60
MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP
Sbjct: 1 MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGP 60
Query: 61 GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS 120
GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS
Sbjct: 61 GAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFS 120
Query: 121 LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH 180
LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH
Sbjct: 121 LPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVH 180
Query: 181 VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT 240
VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT
Sbjct: 181 VRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRT 240
Query: 241 DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP 300
DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP
Sbjct: 241 DRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLP 300
Query: 301 QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ 360
QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ
Sbjct: 301 QQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQ 360
Query: 361 ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS
Sbjct: 361 ESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
Query: 421 SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG 480
SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG
Sbjct: 421 SPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLG 480
Query: 481 EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG 540
EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG
Sbjct: 481 EDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPG 540
Query: 541 PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP 600
PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP
Sbjct: 541 PERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPP 600
Query: 601 EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA 660
EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA
Sbjct: 601 EILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIA 660
Query: 661 GVTES 665
GVTES
Sbjct: 661 GVTES 665
Score = 118 bits (296), Expect = 2e-26
Identities = 59/59 (100%), Positives = 59/59 (100%)
Query: 666 KSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSLAWFS 724
KSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSLAWFS
Sbjct: 741 KSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSLAWFS 799
>gi|167614502 protein phosphatase 1, regulatory (inhibitor) subunit
3A [Homo sapiens]
Length = 1122
Score = 80.1 bits (196), Expect = 7e-15
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 76/250 (30%)
Query: 113 FYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLN 172
+ L P F LP + E L + + +A+L ++ G + +G++RVLN
Sbjct: 104 YVLAPLFDLPSSK---EDLMQQLQIQKAILESTESLLGSTSI----------KGIIRVLN 150
Query: 173 RSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASAS 232
SFEK V+VR S D W + D A YVP S
Sbjct: 151 VSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD---------------------------- 182
Query: 233 SPDDGGRTDRFAFQL----PFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIA 288
G TD+F+F++ P+ + DG++++F +RYET GTFW+NN+G NYT +
Sbjct: 183 -----GETDQFSFKIVLVPPYQK---DGSKVEFCIRYETSVGTFWSNNNGTNYTFIC--- 231
Query: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDD 348
Q + EP+P + E RQ+K C+K + +E + ++
Sbjct: 232 ---------------QKKEQEPEP-VKPWKEVPNRQIKGCLKV----KSSKEESSVTSEE 271
Query: 349 NTFAMAEHPD 358
N F ++ D
Sbjct: 272 NNFENPKNTD 281
>gi|153792466 protein phosphatase 1, regulatory (inhibitor) subunit
3B [Homo sapiens]
Length = 285
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 164 LRGLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLG 223
+ G V+V N +FEK V +R + D W S+ D P +YV +AG+
Sbjct: 145 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYV--KDTYAGSD-------------- 188
Query: 224 LGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTV 283
D F+F + E R++F V YE T+W +N G+NY +
Sbjct: 189 ----------------RDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWDSNRGKNYRI 232
Query: 284 L 284
+
Sbjct: 233 I 233
>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
3G [Homo sapiens]
Length = 358
Score = 53.5 bits (127), Expect = 7e-07
Identities = 57/182 (31%), Positives = 69/182 (37%), Gaps = 42/182 (23%)
Query: 115 LVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRS 174
L P F LP ERL R V LE + + GA V +G RVL+
Sbjct: 197 LRPLFQLPGPSAAAERLQRQRVCLERV---QCSTASGAEV----------KGSGRVLSCP 243
Query: 175 FEKAVHVRASHDGWASFCDHPARYVPR----SPPWA--GAGGTGAGDPILDPG------- 221
+AV VR + W SF D PA P P A GA G+GD +PG
Sbjct: 244 GPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECFHFS 303
Query: 222 LGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNY 281
L L PG D R G + F V Y +G +W NN G NY
Sbjct: 304 LCLPPGLQPEDEEDADER----------------GVAVHFAVCYRCAQGEYWDNNAGANY 347
Query: 282 TV 283
T+
Sbjct: 348 TL 349
>gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo
sapiens]
Length = 299
Score = 48.5 bits (114), Expect = 2e-05
Identities = 73/287 (25%), Positives = 98/287 (34%), Gaps = 66/287 (22%)
Query: 16 PPSPAAGEPRTSVEAAVAPR-RVLFADEALGLPLAQLRRYRPWGGPGAG----------- 63
P SP P T + PR R + A LP + RR + G PGA
Sbjct: 44 PGSPGRAPPPTPAPSGCDPRLRPIILRRARSLPSSPERRQKAAGAPGAACRPGCSQKLRV 103
Query: 64 KMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYL---VPTFS 120
+ A A G + + G+D S LC F L VP F
Sbjct: 104 RFADALGLELAQ---VKVFNAGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFP 160
Query: 121 LPPAPGRL-ERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAV 179
P ERL R +V LE + + G VRV N +FEK V
Sbjct: 161 PPVEAADFGERLQRQLVCLERVTCSDLGISG----------------TVRVCNVAFEKQV 204
Query: 180 HVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGR 239
VR + GW S + AR W G G + + G + P
Sbjct: 205 AVRYTFSGWRSTHEAVAR-------WRGPAGPEGTEDVFTFGFPVPP------------- 244
Query: 240 TDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLR 286
F +L G+R+ F VRY+ +W NN R+Y++ R
Sbjct: 245 ---FLLEL--------GSRVHFAVRYQVAGAEYWDNNDHRDYSLTCR 280
>gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit 3C
[Homo sapiens]
Length = 317
Score = 47.8 bits (112), Expect = 4e-05
Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 33/158 (20%)
Query: 166 GLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLG 225
G V+V N SFEK V +R + D W ++ D Y+ GGT +
Sbjct: 171 GTVKVKNVSFEKKVQIRITFDSWKNYTDVDCVYMKNV-----YGGTDS------------ 213
Query: 226 PGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLL 285
D F+F + +++F + Y FW NN G+NY + +
Sbjct: 214 ---------------DTFSFAIDLPPVIPTEQKIEFCISYHANGQVFWDNNDGQNYRI-V 257
Query: 286 RIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEAR 323
+ P + PQ Q P+ E + + R
Sbjct: 258 HVQWKPDGVQTQMAPQDCAFHQTSPKTELESTIFGSPR 295
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 47.4 bits (111), Expect = 5e-05
Identities = 54/197 (27%), Positives = 70/197 (35%), Gaps = 9/197 (4%)
Query: 282 TVLLRIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEEL 341
TV R+A P+ A P P P P P A A + V RPA
Sbjct: 489 TVSDRLASEELPSTAVPTPATTPAPAPAPAP-APAPALASAATKERTESEVPPRPASP-- 545
Query: 342 KTKNMDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGD--VPR 399
K T A E D+ P P PQ++ S P P G P+
Sbjct: 546 KVTRSPPETAAPVE--DMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQ 603
Query: 400 SSPPVAFTEVLQAPAIR--IPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEA 457
+ P L+AP + +PP+ P S R AS AS G P A+
Sbjct: 604 ALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQV 663
Query: 458 TWGVSSENGGGLEAVSG 474
G ++ GG EA+SG
Sbjct: 664 DLGAATAEGGAPEAISG 680
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.8 bits (107), Expect = 1e-04
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 401 SPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWG 460
+PP+AF AP P + P G + GP+++ A G L+P +
Sbjct: 676 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA-LDPGPSPGTSGGK 734
Query: 461 VSSENGGGLEAVSGSEELLGE---DTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTD 517
++ G G + S + LGE + + Q LS L AA A G GGG G +
Sbjct: 735 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Query: 518 GGMSPSHPLGILTDRDL 534
GG L+D +L
Sbjct: 795 GGGVTGGARAALSDAEL 811
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/211 (24%), Positives = 69/211 (32%), Gaps = 34/211 (16%)
Query: 289 PAPTPTDAEGLPQQQQLP-------QLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEEL 341
PA P P Q P Q+ P P P+ A P+ P +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ--- 511
Query: 342 KTKNMDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSS 401
+A+ P P +A PL+ P A P ++
Sbjct: 512 -----------LAKPPP---QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 557
Query: 402 PPVAFTEVLQAPAIRIPPSSPLCGLGGSP-RDQASGPDASEG--------ATGPFLEPSQ 452
PP VL AP +++PPS P +P R GPD S A GP PS+
Sbjct: 558 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 617
Query: 453 QQAEATWGVSSENGGGLEAVSGSEELLGEDT 483
+ G G A S EEL G D+
Sbjct: 618 SPSSTLSGPDLA-GHSSSATSTPEELRGYDS 647
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 45.8 bits (107), Expect = 1e-04
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 401 SPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWG 460
+PP+AF AP P + P G + GP+++ A G L+P +
Sbjct: 945 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA-LDPGPSPGTSGGK 1003
Query: 461 VSSENGGGLEAVSGSEELLGE---DTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTD 517
++ G G + S + LGE + + Q LS L AA A G GGG G +
Sbjct: 1004 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 1063
Query: 518 GGMSPSHPLGILTDRDL 534
GG L+D +L
Sbjct: 1064 GGGVTGGARAALSDAEL 1080
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/207 (25%), Positives = 68/207 (32%), Gaps = 13/207 (6%)
Query: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRP---AEEELKTKN 345
PA P P Q P L P P + + P R P A L+
Sbjct: 711 PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Query: 346 MDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVA 405
+ M+ P +A PL+ P A P ++PP
Sbjct: 771 SPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 830
Query: 406 FTEVLQAPAIRIPPSSPLCGLGGSP-RDQASGPDASEG--------ATGPFLEPSQQQAE 456
VL AP +++PPS P +P R GPD S A GP PS+ +
Sbjct: 831 APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 890
Query: 457 ATWGVSSENGGGLEAVSGSEELLGEDT 483
G G A S EEL G D+
Sbjct: 891 TLSGPDLA-GHSSSATSTPEELRGYDS 916
Score = 34.7 bits (78), Expect = 0.32
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 357 PDVQESVGPLVAPTPLRPWPQMT--LQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPA 414
P + P P P P P LQV P PA P ++PP +L AP
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSP----PASPPMSPSATPPPRVPPLLAAPP 765
Query: 415 IRIPPSSP 422
+++PPS P
Sbjct: 766 LQVPPSPP 773
Score = 33.1 bits (74), Expect = 0.93
Identities = 38/155 (24%), Positives = 52/155 (33%), Gaps = 21/155 (13%)
Query: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDD 348
PA +GLP P P P Q P L++ P PA L
Sbjct: 596 PALASPPLQGLPSPPLSPLATPPP--QAPPXLALPPLQAPPSP----PASPPLSP----- 644
Query: 349 NTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTE 408
P ++ + P P P +Q P P P ++PP
Sbjct: 645 ---LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS----PSATPPSQAPP 697
Query: 409 VLQAPAIRIPPS---SPLCGLGGSPRDQASGPDAS 440
L AP +++PPS SP +P QA P A+
Sbjct: 698 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Score = 32.0 bits (71), Expect = 2.1
Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 359 VQESVGPLVAPTP------LRPWPQMTLQVSDVPMTGNPAEE----GDVPRSSPPVAFTE 408
+Q PL P P P PQ ++ P+ G P+ P +PP
Sbjct: 569 LQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALP 628
Query: 409 VLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEA 457
LQAP PP+SP +P QA A PF P +A
Sbjct: 629 PLQAPP--SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675
Score = 30.4 bits (67), Expect = 6.0
Identities = 42/178 (23%), Positives = 56/178 (31%), Gaps = 25/178 (14%)
Query: 292 TPTDAEGLPQQQQLPQLEPQP--ECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDN 349
TP + P + LP L P P P+ + C P + L T +
Sbjct: 525 TPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETP 584
Query: 350 TFAMAEHPDVQESVG-------------PLVAPTPLRPWPQMTL---QVSDVPMTGNPAE 393
+ P ++ PL P P P P + L Q P P
Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAP-PXLALPPLQAPPSPPASPPLS 643
Query: 394 EGDVPRSSPPVAFT-EVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEP 450
P P A +LQAP PPS P+ +P + P S AT P P
Sbjct: 644 PLATPSPQAPNALAVHLLQAP-FSPPPSPPV----QAPFSPPASPPVSPSATPPSQAP 696
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.8 bits (107), Expect = 1e-04
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 401 SPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWG 460
+PP+AF AP P + P G + GP+++ A G L+P +
Sbjct: 637 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA-LDPGPSPGTSGGK 695
Query: 461 VSSENGGGLEAVSGSEELLGE---DTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTD 517
++ G G + S + LGE + + Q LS L AA A G GGG G +
Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 755
Query: 518 GGMSPSHPLGILTDRDL 534
GG L+D +L
Sbjct: 756 GGGVTGGARAALSDAEL 772
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/211 (24%), Positives = 69/211 (32%), Gaps = 34/211 (16%)
Query: 289 PAPTPTDAEGLPQQQQLP-------QLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEEL 341
PA P P Q P Q+ P P P+ A P+ P +
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ--- 472
Query: 342 KTKNMDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSS 401
+A+ P P +A PL+ P A P ++
Sbjct: 473 -----------LAKPPP---QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 518
Query: 402 PPVAFTEVLQAPAIRIPPSSPLCGLGGSP-RDQASGPDASEG--------ATGPFLEPSQ 452
PP VL AP +++PPS P +P R GPD S A GP PS+
Sbjct: 519 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 578
Query: 453 QQAEATWGVSSENGGGLEAVSGSEELLGEDT 483
+ G G A S EEL G D+
Sbjct: 579 SPSSTLSGPDLA-GHSSSATSTPEELRGYDS 608
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 53 RYRPWGGPGAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEP 101
R PW G AG AA G+ GG G ++DGED DE EEE+E P
Sbjct: 1278 RRPPWEGADAG---AAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAP 1323
Score = 38.5 bits (88), Expect = 0.022
Identities = 112/452 (24%), Positives = 142/452 (31%), Gaps = 97/452 (21%)
Query: 17 PSPAAGEP--RTSVEAAVAPRRVLFA---DEALGLPLAQL-----------RRYRPWGG- 59
P+P GEP TS+E A AP V+ + E PL RR GG
Sbjct: 1068 PAPTIGEPAPETSLERAPAPSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRAPETGGA 1127
Query: 60 ---PGAGKMAAAAG----------QDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCP 106
PGAG++ +G GG G G D D + P P PL P
Sbjct: 1128 PRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQ------PPPPPLPP 1181
Query: 107 VPAGGGFYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRG 166
P L PAP R R V E P + GG G PP
Sbjct: 1182 PPE------AQPRRLEPAPPR----ARPEVAPEGEPGAPDSRAGGDTALSGDGDPPKPER 1231
Query: 167 LVRVLNRSF---------EKAVHVRASHDGWA----SFCDHPARYVPRSPPWAGAGGTGA 213
+ R F + + R S A + P PR PPW GA A
Sbjct: 1232 KGPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGP-GPRRPPWEGADAGAA 1290
Query: 214 GDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFW 273
G G GP + D+ D A A GA G R
Sbjct: 1291 GGEAGGAG-APGPAEEDGEDEDEDEEEDEEA----AAPGAAAGPR--------------- 1330
Query: 274 ANNHGRNYTVLLRIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVR 333
GR R AP P + + L L P +G E E +L+ K V
Sbjct: 1331 --GPGR-----ARAAPVPVVVSSADADAARPLRGLLKSP--RGADEPEDSELERKRKMVS 1381
Query: 334 -RRPAEEELKTKNMDDNTFAMAEHP--DVQESVGPLVAPTPLRP-WPQMTLQVSDVPMTG 389
L + N ++ P D S P PTP P P +D G
Sbjct: 1382 FHGDVTVYLFDQETPTNELSVQAPPEGDTDPSTPP-APPTPPHPATPGDGFPSNDSGFGG 1440
Query: 390 NPAEEGD---VPRSSPPVAFTEVLQAPAIRIP 418
+ D +P PP+ F+ +PA+ P
Sbjct: 1441 SFEWAEDFPLLPPPGPPLCFSRFSVSPALETP 1472
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 43.5 bits (101), Expect = 7e-04
Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 286 RIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQ-LKSCMKPVRR---RPAEEEL 341
++ P P P + PQ Q PQL PQP+ Q A Q + PV +P E
Sbjct: 405 KLQPQPQP---QPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELE 461
Query: 342 KTKNMDDNTFAMAEHPDVQESVGPLVAP-TPLRPWPQMTLQVSDVPMTGNPAEE-GDVPR 399
++ + E DV E GP+ P +P R P + + VP A ++PR
Sbjct: 462 PEPEIEGLLTPVLEAGDVDE--GPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPR 519
Query: 400 SSPPVAFTEVLQAPAIRIPPS---------SPLCGLGGSPRDQASGPDASEGATGPFLEP 450
P + QAPA+ +PP+ S L G P GP E P E
Sbjct: 520 --PLKRRGSMEQAPAVALPPTHKKQYQQIISRLFHRHGGP-----GPGGPEPELSPITEG 572
Query: 451 SQQQA 455
S+ +A
Sbjct: 573 SEARA 577
Score = 33.5 bits (75), Expect = 0.71
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 292 TPTDAEGLPQQQQLP----------QLEPQPECQG---PV----EAEARQLKSCMKPVRR 334
TPT A PQQ P +LEP+PE +G PV + + + + P R
Sbjct: 434 TPTPAPQHPQQTWPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRL 493
Query: 335 RPA--EEELKTKNMDDNTFAMAEHP-------DVQESVGPLVAPTPLRPWPQMTLQVSDV 385
+PA E +++ +AE P ++++ + PT + + Q+ ++
Sbjct: 494 QPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPAVALPPTHKKQYQQIISRLFH- 552
Query: 386 PMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
G P G P SP +E P PP+
Sbjct: 553 -RHGGPGPGGPEPELSPITEGSEARAGPPAPAPPA 586
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 43.5 bits (101), Expect = 7e-04
Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 286 RIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQ-LKSCMKPVRR---RPAEEEL 341
++ P P P + PQ Q PQL PQP+ Q A Q + PV +P E
Sbjct: 405 KLQPQPQP---QPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELE 461
Query: 342 KTKNMDDNTFAMAEHPDVQESVGPLVAP-TPLRPWPQMTLQVSDVPMTGNPAEE-GDVPR 399
++ + E DV E GP+ P +P R P + + VP A ++PR
Sbjct: 462 PEPEIEGLLTPVLEAGDVDE--GPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPR 519
Query: 400 SSPPVAFTEVLQAPAIRIPPS---------SPLCGLGGSPRDQASGPDASEGATGPFLEP 450
P + QAPA+ +PP+ S L G P GP E P E
Sbjct: 520 --PLKRRGSMEQAPAVALPPTHKKQYQQIISRLFHRHGGP-----GPGGPEPELSPITEG 572
Query: 451 SQQQA 455
S+ +A
Sbjct: 573 SEARA 577
Score = 33.5 bits (75), Expect = 0.71
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 292 TPTDAEGLPQQQQLP----------QLEPQPECQG---PV----EAEARQLKSCMKPVRR 334
TPT A PQQ P +LEP+PE +G PV + + + + P R
Sbjct: 434 TPTPAPQHPQQTWPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRL 493
Query: 335 RPA--EEELKTKNMDDNTFAMAEHP-------DVQESVGPLVAPTPLRPWPQMTLQVSDV 385
+PA E +++ +AE P ++++ + PT + + Q+ ++
Sbjct: 494 QPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPAVALPPTHKKQYQQIISRLFH- 552
Query: 386 PMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPS 420
G P G P SP +E P PP+
Sbjct: 553 -RHGGPGPGGPEPELSPITEGSEARAGPPAPAPPA 586
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 43.1 bits (100), Expect = 9e-04
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 29/227 (12%)
Query: 418 PPSSPLCGLGGSPRDQAS-GPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSE 476
P ++P G SP+ ++ AS+GA E S+Q E + SE G EA +
Sbjct: 428 PKNAPESKKGSSPKPKSCIKAAASQGAEKTVSEVSEQPKETSMTEPSEPGSKAEA----K 483
Query: 477 ELLGEDTIDQELE----QLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPL--GILT 530
+ LG D DQ LE ++ + + ++ A G+ S +G P+ P +
Sbjct: 484 KALGGDVSDQSLESHSQKVSETQMCESNSSKETSLATPAGKESQEGPKHPTGPFFPVLSK 543
Query: 531 DRDLILKWPGPERALNSALAEEITLHYA--------RLGRGVEL-IKDTEDPDDEGEGEE 581
D L+WP A E ++ Y+ +L R + K TE P D G
Sbjct: 544 DESTALQWPSELLIFTKA---EPSISYSCNPLYFDFKLSRNKDARTKGTEKPKDIG---- 596
Query: 582 GLSVTPSSPEGDSPKESPPEILSGARSVVATMGDVWLPWAEGSGCDG 628
S + +G P E G +V + G A GS C G
Sbjct: 597 --SSSKDHLQGLDPGEPNKSKEVGGEKIVRSSGGRMDAPASGSACSG 641
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 42.4 bits (98), Expect = 0.002
Identities = 59/237 (24%), Positives = 82/237 (34%), Gaps = 16/237 (6%)
Query: 12 RHSAPPSPAAGEPRT-SVEAAVAPRRV-LFADEALGLPLAQLRRYRPWGGPGAGKMAAAA 69
+H SP G + S AA AP + + G P +Q Y + PGAG
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Query: 70 GQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLE 129
G GGG GG G G A + GGG Y + +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 130 RLGRVMVEL----EALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASH 185
+ G +M+ A L A G G+ G LN+ + S+
Sbjct: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSY 375
Query: 186 DGWASFCDHPARYVPRSPP-----WAGAGGTGAGDPILDPGLGLGP---GQASASSP 234
G S+ ++ + P PP A A G AG G+GLG Q +A+SP
Sbjct: 376 GG--SYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Score = 37.7 bits (86), Expect = 0.038
Identities = 63/224 (28%), Positives = 78/224 (34%), Gaps = 48/224 (21%)
Query: 73 GGGGGGADEDD-DGEDGDEGEEEEEAC-----PEPSPLCPVPAGGGFYLVPTFSLPPAPG 126
GG GGGA + D E G ++ A P PL P G P PA G
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP--GDEDDAPPKMGEPAGG 140
Query: 127 RLERLGRVMVELEALLPPPGAVPGGAG--VWVP--------------------------- 157
R E G + + PP AVPGG G VP
Sbjct: 141 RYEHPGLGALGTQQ---PPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 158 GGRPPVLRGLVRVLNRSFEKAVH----VRASHDGWA-SFCDHPARYVPRSPPWAGAGGTG 212
GG+ G++ + + A ++ SH+G+ S C+H Y S P AG GG G
Sbjct: 198 GGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGY---SRPGAGGGGGG 254
Query: 213 AGDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDG 256
G G G G G A A G A A G G G
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 30.0 bits (66), Expect = 7.9
Identities = 37/154 (24%), Positives = 45/154 (29%), Gaps = 26/154 (16%)
Query: 386 PMTGNPAEEGDVP---------RSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPR----- 431
P+ P +E D P R P Q P + +P G GG P
Sbjct: 119 PLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP------GGGGGPAAVPEF 172
Query: 432 -----DQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLGEDTIDQ 486
A G GP + Q G+ GS + L
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGY 232
Query: 487 ELEQL-YLSHLSRLRAAVAAGGAGGGGEGSTDGG 519
Q + SR A GG GGGG GS GG
Sbjct: 233 PNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG 266
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 42.4 bits (98), Expect = 0.002
Identities = 59/237 (24%), Positives = 82/237 (34%), Gaps = 16/237 (6%)
Query: 12 RHSAPPSPAAGEPRT-SVEAAVAPRRV-LFADEALGLPLAQLRRYRPWGGPGAGKMAAAA 69
+H SP G + S AA AP + + G P +Q Y + PGAG
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Query: 70 GQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLE 129
G GGG GG G G A + GGG Y + +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 130 RLGRVMVEL----EALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASH 185
+ G +M+ A L A G G+ G LN+ + S+
Sbjct: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSY 375
Query: 186 DGWASFCDHPARYVPRSPP-----WAGAGGTGAGDPILDPGLGLGP---GQASASSP 234
G S+ ++ + P PP A A G AG G+GLG Q +A+SP
Sbjct: 376 GG--SYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Score = 37.7 bits (86), Expect = 0.038
Identities = 63/224 (28%), Positives = 78/224 (34%), Gaps = 48/224 (21%)
Query: 73 GGGGGGADEDD-DGEDGDEGEEEEEAC-----PEPSPLCPVPAGGGFYLVPTFSLPPAPG 126
GG GGGA + D E G ++ A P PL P G P PA G
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP--GDEDDAPPKMGEPAGG 140
Query: 127 RLERLGRVMVELEALLPPPGAVPGGAG--VWVP--------------------------- 157
R E G + + PP AVPGG G VP
Sbjct: 141 RYEHPGLGALGTQQ---PPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 158 GGRPPVLRGLVRVLNRSFEKAVH----VRASHDGWA-SFCDHPARYVPRSPPWAGAGGTG 212
GG+ G++ + + A ++ SH+G+ S C+H Y S P AG GG G
Sbjct: 198 GGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGY---SRPGAGGGGGG 254
Query: 213 AGDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDG 256
G G G G G A A G A A G G G
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 30.0 bits (66), Expect = 7.9
Identities = 37/154 (24%), Positives = 45/154 (29%), Gaps = 26/154 (16%)
Query: 386 PMTGNPAEEGDVP---------RSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPR----- 431
P+ P +E D P R P Q P + +P G GG P
Sbjct: 119 PLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP------GGGGGPAAVPEF 172
Query: 432 -----DQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLGEDTIDQ 486
A G GP + Q G+ GS + L
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGY 232
Query: 487 ELEQL-YLSHLSRLRAAVAAGGAGGGGEGSTDGG 519
Q + SR A GG GGGG GS GG
Sbjct: 233 PNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG 266
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 42.4 bits (98), Expect = 0.002
Identities = 59/237 (24%), Positives = 82/237 (34%), Gaps = 16/237 (6%)
Query: 12 RHSAPPSPAAGEPRT-SVEAAVAPRRV-LFADEALGLPLAQLRRYRPWGGPGAGKMAAAA 69
+H SP G + S AA AP + + G P +Q Y + PGAG
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Query: 70 GQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLE 129
G GGG GG G G A + GGG Y + +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 130 RLGRVMVEL----EALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASH 185
+ G +M+ A L A G G+ G LN+ + S+
Sbjct: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSY 375
Query: 186 DGWASFCDHPARYVPRSPP-----WAGAGGTGAGDPILDPGLGLGP---GQASASSP 234
G S+ ++ + P PP A A G AG G+GLG Q +A+SP
Sbjct: 376 GG--SYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Score = 37.7 bits (86), Expect = 0.038
Identities = 63/224 (28%), Positives = 78/224 (34%), Gaps = 48/224 (21%)
Query: 73 GGGGGGADEDD-DGEDGDEGEEEEEAC-----PEPSPLCPVPAGGGFYLVPTFSLPPAPG 126
GG GGGA + D E G ++ A P PL P G P PA G
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP--GDEDDAPPKMGEPAGG 140
Query: 127 RLERLGRVMVELEALLPPPGAVPGGAG--VWVP--------------------------- 157
R E G + + PP AVPGG G VP
Sbjct: 141 RYEHPGLGALGTQQ---PPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 158 GGRPPVLRGLVRVLNRSFEKAVH----VRASHDGWA-SFCDHPARYVPRSPPWAGAGGTG 212
GG+ G++ + + A ++ SH+G+ S C+H Y S P AG GG G
Sbjct: 198 GGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGY---SRPGAGGGGGG 254
Query: 213 AGDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDG 256
G G G G G A A G A A G G G
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 30.0 bits (66), Expect = 7.9
Identities = 37/154 (24%), Positives = 45/154 (29%), Gaps = 26/154 (16%)
Query: 386 PMTGNPAEEGDVP---------RSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPR----- 431
P+ P +E D P R P Q P + +P G GG P
Sbjct: 119 PLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP------GGGGGPAAVPEF 172
Query: 432 -----DQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLGEDTIDQ 486
A G GP + Q G+ GS + L
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGY 232
Query: 487 ELEQL-YLSHLSRLRAAVAAGGAGGGGEGSTDGG 519
Q + SR A GG GGGG GS GG
Sbjct: 233 PNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG 266
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 41.2 bits (95), Expect = 0.003
Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 28/160 (17%)
Query: 288 APAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMD 347
AP+P P + Q P L QP QGP EA QL+ +P +RP + T+ +
Sbjct: 317 APSPDPDLVQRTEAPPQPPPLSTQPP-QGPPEA---QLQPAPQPQVQRPPRPQSPTQLLH 372
Query: 348 DNTFAMAEHPDVQESVGPLVA-PTPLRPWPQMTLQVSDVPMTGNPAEEG----------- 395
N + HP Q PL A + ++ S P PA
Sbjct: 373 QNLPPVQAHPSAQSLSQPLSAYNSSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFP 432
Query: 396 -DVPRSSPPVAFTEVLQ-----------APAIRIPPSSPL 423
+P SP +FT LQ AP +PP PL
Sbjct: 433 LSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPL 472
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 41.2 bits (95), Expect = 0.003
Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 28/160 (17%)
Query: 288 APAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMD 347
AP+P P + Q P L QP QGP EA QL+ +P +RP + T+ +
Sbjct: 317 APSPDPDLVQRTEAPPQPPPLSTQPP-QGPPEA---QLQPAPQPQVQRPPRPQSPTQLLH 372
Query: 348 DNTFAMAEHPDVQESVGPLVA-PTPLRPWPQMTLQVSDVPMTGNPAEEG----------- 395
N + HP Q PL A + ++ S P PA
Sbjct: 373 QNLPPVQAHPSAQSLSQPLSAYNSSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFP 432
Query: 396 -DVPRSSPPVAFTEVLQ-----------APAIRIPPSSPL 423
+P SP +FT LQ AP +PP PL
Sbjct: 433 LSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPL 472
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.8 bits (94), Expect = 0.004
Identities = 43/164 (26%), Positives = 56/164 (34%), Gaps = 24/164 (14%)
Query: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDD 348
P P P + P QQ P +P P Q P + Q + P + D
Sbjct: 61 PPPPPHQQQQQPPPQQPPPQQPPPH-QPPPHPQPHQQQQPPPPPQ-------------DS 106
Query: 349 NTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTE 408
+ +A+ P VG AP P T P +G P G P +PP A T
Sbjct: 107 SKPVVAQGPGPAPGVGS--APPASSSAPPAT-----PPTSGAPPGSGPGPTPTPPPAVT- 158
Query: 409 VLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQ 452
AP PP+ P G+ +P P GP P Q
Sbjct: 159 --SAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 40.8 bits (94), Expect = 0.004
Identities = 68/263 (25%), Positives = 84/263 (31%), Gaps = 61/263 (23%)
Query: 10 PLRH---SAPPSPAAGEPRTSVEAAVAPRRVLFADEALGL----PLAQLR-RYRPWGGPG 61
PL H +A + AA R AA + L E LG P+ ++ P GG G
Sbjct: 21 PLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPVGLAHPQWLPTGGGG 80
Query: 62 AGKMAAAA----GQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVP 117
G A G+ GGGG G +D G GGGF+
Sbjct: 81 GGDWAGGPHLEHGKAGGGGTGRADDGGG------------------------GGGFHARL 116
Query: 118 TFSLPPAPGRLERLGRVMVEL-EALLPPPGAVPGG--------AGVWVPGGRPPVLRGLV 168
G G L A+ P PGA G A PGG L G++
Sbjct: 117 VHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGML 176
Query: 169 RVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAG----------AGGTGAGDPIL 218
+H DG H A+ P PP G AGG A L
Sbjct: 177 AAGGGGAGPGLHHALHEDG------HEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 230
Query: 219 DPGLGLGPGQASASSPDDGGRTD 241
PG G G S +D +D
Sbjct: 231 HPGAGGGGSSVGEHSDEDAPSSD 253
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 40.4 bits (93), Expect = 0.006
Identities = 64/230 (27%), Positives = 74/230 (32%), Gaps = 59/230 (25%)
Query: 6 PVEPPLRHSAPPSPAAGEPRTSVEAAVAPR--RVLFADEALGLPLAQLRRYRPWGGPGAG 63
P EPP + P P+ P + AV P R+ F DE+ P A+ R P P G
Sbjct: 1016 PAEPPAG-AFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAP-ARWPRSDPESQPLLG 1073
Query: 64 KMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPP 123
A AG GG GGGA A P P P P P L P
Sbjct: 1074 PGAGGAGGTGGAGGGA----------------PAAPPPCRAAPPPC-------PYLDLEP 1110
Query: 124 APG---RLERLGRVMV--------------ELEALLPPPGAV-----PGG--AGVW---V 156
+P E LG + E L PPPG GG AG W
Sbjct: 1111 SPSDSEDSESLGGASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAGSWDYLP 1170
Query: 157 PGGRPPVLRGLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWA 206
P P H+ SHDG + P PPWA
Sbjct: 1171 PRSGPAAWHCRHCASLELLPPPRHLSCSHDGLDG-----GWWAPPPPPWA 1215
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 40.4 bits (93), Expect = 0.006
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 15 APPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGPGAGKMAAAAGQDGG 74
A + AA E + EAA A V+ ++ + G + G++GG
Sbjct: 194 AEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGG 253
Query: 75 GGGGADEDDDGEDGDEGEEEEE 96
GGG +E ++ E+ +E EEEEE
Sbjct: 254 GGGEGEETEEEEEEEEEEEEEE 275
>gi|169215908 PREDICTED: family with sequence similarity 108, member
A5 [Homo sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.008
Identities = 47/142 (33%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 55 RPWGGPGAGKMAAAAGQD------GGGGGGADEDDDGEDGDEGEEE--EEACPE---PSP 103
RPWG PGA A D GG D D G G CP P P
Sbjct: 12 RPWG-PGARAGVAFPRHDMETCGCEAPWGGLDRDGAGPWPPNGAAVWGSHPCPRLGAPPP 70
Query: 104 L-CPV---------PAGGGFYLVPT------------FSLPPAPGRLE-RLGRVMVELE- 139
L CP P GG P F PP PGR+ +L + E
Sbjct: 71 LPCPARPGGVVGGGPGGGPAREAPAMNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATY 130
Query: 140 ALLPPPGAVPGGAGVWVPGGRP 161
+L+P PG PGGAG W GRP
Sbjct: 131 SLVPEPG--PGGAGAWWGRGRP 150
>gi|169215726 PREDICTED: family with sequence similarity 108, member
A5 [Homo sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.008
Identities = 47/142 (33%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 55 RPWGGPGAGKMAAAAGQD------GGGGGGADEDDDGEDGDEGEEE--EEACPE---PSP 103
RPWG PGA A D GG D D G G CP P P
Sbjct: 12 RPWG-PGARAGVAFPRHDMETCGCEAPWGGLDRDGAGPWPPNGAAVWGSHPCPRLGAPPP 70
Query: 104 L-CPV---------PAGGGFYLVPT------------FSLPPAPGRLE-RLGRVMVELE- 139
L CP P GG P F PP PGR+ +L + E
Sbjct: 71 LPCPARPGGVVGGGPGGGPAREAPAMNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATY 130
Query: 140 ALLPPPGAVPGGAGVWVPGGRP 161
+L+P PG PGGAG W GRP
Sbjct: 131 SLVPEPG--PGGAGAWWGRGRP 150
>gi|239746656 PREDICTED: hypothetical protein LOC729495 [Homo
sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.008
Identities = 47/142 (33%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 55 RPWGGPGAGKMAAAAGQD------GGGGGGADEDDDGEDGDEGEEE--EEACPE---PSP 103
RPWG PGA A D GG D D G G CP P P
Sbjct: 12 RPWG-PGARAGVAFPRHDMETCGCEAPWGGLDRDGAGPWPPNGAAVWGSHPCPRLGAPPP 70
Query: 104 L-CPV---------PAGGGFYLVPT------------FSLPPAPGRLE-RLGRVMVELE- 139
L CP P GG P F PP PGR+ +L + E
Sbjct: 71 LPCPARPGGVVGGGPGGGPAREAPAMNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATY 130
Query: 140 ALLPPPGAVPGGAGVWVPGGRP 161
+L+P PG PGGAG W GRP
Sbjct: 131 SLVPEPG--PGGAGAWWGRGRP 150
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 39.3 bits (90), Expect = 0.013
Identities = 59/273 (21%), Positives = 99/273 (36%), Gaps = 30/273 (10%)
Query: 277 HGRNYTVLLRIAPAPTPTDAEGL----PQQQQLPQLEPQPECQGPVEAEARQLKSCMKPV 332
HGRN++ + R+ + T + + ++Q L ++ Q + + E AR+ K
Sbjct: 630 HGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAA 689
Query: 333 RRRPA-------EEELKTKNMDDNTFAMAEHPD--VQESVGPLVAPTPLR---------- 373
A +EE++ + N M E + V S P+P
Sbjct: 690 ASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQNG 749
Query: 374 PWPQMTLQVSDVPMTGNPAEEG-DVPRSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRD 432
P P TL +D P G P D+P + P +E AP P SP P++
Sbjct: 750 PKPPATLG-ADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKE 808
Query: 433 QASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSG--SEELLGEDTIDQELEQ 490
+ + A P E +Q+ A ++ + G E V +EE ++ E
Sbjct: 809 E---KEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 865
Query: 491 LYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPS 523
+ L+A GG+G + G S
Sbjct: 866 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDS 898
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 38.9 bits (89), Expect = 0.017
Identities = 46/153 (30%), Positives = 60/153 (39%), Gaps = 37/153 (24%)
Query: 52 RRYRPWGGPGAGKMAAAAGQD----GGGGGGADEDDDGEDGDEGEEEEEACPEPSPL-CP 106
RR RPW P A AA AG + G A D G+ G + + + P P P P
Sbjct: 37 RRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVP 96
Query: 107 VPAGGGFYLVPTF--------SLPPAPGRLERLGRVMVELEALLP----PPGAVPGGAG- 153
P+ G L P+ + PP P LG + + + PP A PG +G
Sbjct: 97 PPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGP 156
Query: 154 ---------VWVPGG--------RPPVL--RGL 167
V +PGG +PPVL RGL
Sbjct: 157 VSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGL 189
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 38.5 bits (88), Expect = 0.022
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 60 PGAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTF 119
PG G AA ++ GG + +++ G + D EEEE EP PL G
Sbjct: 391 PGEGTAGAALLEEAGG---SVKEEAGPEVDPEEEEE----EPQPLPHGREAEGAEEDGRG 443
Query: 120 SLPPAPGRLERLGRVMVELEALLPPPGA-VPGGAGVWVPGG-RPPVL 164
L P + ER + L LPPP A P +W+P PPVL
Sbjct: 444 KLRPTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVL 490
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,234,552
Number of Sequences: 37866
Number of extensions: 2503426
Number of successful extensions: 18830
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 446
Number of HSP's that attempted gapping in prelim test: 14797
Number of HSP's gapped (non-prelim): 3704
length of query: 724
length of database: 18,247,518
effective HSP length: 110
effective length of query: 614
effective length of database: 14,082,258
effective search space: 8646506412
effective search space used: 8646506412
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.