Guide to the Human Genome
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Search of human proteins with 239757516

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757516 PREDICTED: hypothetical protein [Homo sapiens]
         (451 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757516 PREDICTED: hypothetical protein [Homo sapiens]           903   0.0  
gi|239752032 PREDICTED: hypothetical protein XP_002348072 [Homo ...   897   0.0  
gi|239746516 PREDICTED: hypothetical protein XP_002343750 [Homo ...   897   0.0  
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]            37   0.028
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ...    37   0.028
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ...    37   0.028
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.31 
gi|239755661 PREDICTED: hypothetical protein [Homo sapiens]            32   0.90 
gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo ...    32   0.90 
gi|239750175 PREDICTED: hypothetical protein XP_002347304 [Homo ...    32   0.90 
gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo ...    32   0.90 
gi|239744486 PREDICTED: hypothetical protein XP_002343172 [Homo ...    32   0.90 
gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo ...    32   0.90 
gi|171906567 peripheral benzodiazepine receptor-associated prote...    32   0.90 
gi|171906559 peripheral benzodiazepine receptor-associated prote...    32   0.90 
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo...    32   1.5  
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo...    32   1.5  
gi|148276998 zinc finger protein 628 [Homo sapiens]                    32   1.5  
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho...    31   2.6  
gi|4502131 amyloid beta A4 precursor protein-binding, family B, ...    30   3.4  
gi|22035554 amyloid beta A4 precursor protein-binding, family B,...    30   3.4  
gi|156616271 kinesin family member 19 [Homo sapiens]                   30   3.4  
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    30   4.5  
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    30   4.5  
gi|149363674 hypothetical protein LOC25758 [Homo sapiens]              30   4.5  
gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap...    30   4.5  
gi|153792074 proline rich 12 [Homo sapiens]                            30   4.5  
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   5.8  
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    30   5.8  
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho...    30   5.8  

>gi|239757516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 451

 Score =  903 bits (2334), Expect = 0.0
 Identities = 451/451 (100%), Positives = 451/451 (100%)

Query: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
           MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES
Sbjct: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60

Query: 61  WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
           WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61  WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120

Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
           THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180

Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
           RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240

Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
           GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300

Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
           GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360

Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
           AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420

Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
           SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451


>gi|239752032 PREDICTED: hypothetical protein XP_002348072 [Homo
           sapiens]
          Length = 451

 Score =  897 bits (2318), Expect = 0.0
 Identities = 448/451 (99%), Positives = 449/451 (99%)

Query: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
           MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGRED GLAVGGQGSGEDSGSQRTVGES
Sbjct: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDSGLAVGGQGSGEDSGSQRTVGES 60

Query: 61  WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
           WG+FLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61  WGNFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120

Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
            HTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 AHTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180

Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
           RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240

Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
           GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300

Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
           GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360

Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
           AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420

Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
           SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451


>gi|239746516 PREDICTED: hypothetical protein XP_002343750 [Homo
           sapiens]
          Length = 451

 Score =  897 bits (2318), Expect = 0.0
 Identities = 448/451 (99%), Positives = 449/451 (99%)

Query: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
           MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGRED GLAVGGQGSGEDSGSQRTVGES
Sbjct: 1   MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDSGLAVGGQGSGEDSGSQRTVGES 60

Query: 61  WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
           WG+FLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61  WGNFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120

Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
            HTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 AHTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180

Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
           RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240

Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
           GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300

Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
           GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360

Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
           AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420

Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
           SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451


>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
           P  T   V  G H    ++Q + G   L + Q+        L RR   + G  RPL    
Sbjct: 57  PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 105

Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
            PQAG +LQ         G L    AV +     R  AA+ V E GLAV Q+        
Sbjct: 106 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 164

Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
            +A  +A AL ++ +  V V +G R Q+LG  A
Sbjct: 165 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 197


>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
           sapiens]
          Length = 346

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
           P  T   V  G H    ++Q + G   L + Q+        L RR   + G  RPL    
Sbjct: 122 PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 170

Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
            PQAG +LQ         G L    AV +     R  AA+ V E GLAV Q+        
Sbjct: 171 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 229

Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
            +A  +A AL ++ +  V V +G R Q+LG  A
Sbjct: 230 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 262


>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
           sapiens]
          Length = 346

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
           P  T   V  G H    ++Q + G   L + Q+        L RR   + G  RPL    
Sbjct: 122 PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 170

Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
            PQAG +LQ         G L    AV +     R  AA+ V E GLAV Q+        
Sbjct: 171 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 229

Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
            +A  +A AL ++ +  V V +G R Q+LG  A
Sbjct: 230 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 262


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 15/25 (60%), Positives = 17/25 (68%)

Query: 67  LRGLPDPILTITATPPPAVPPRLLL 91
           L+GLP P L+  ATPPP  PP L L
Sbjct: 603 LQGLPSPPLSPLATPPPQAPPXLAL 627


>gi|239755661 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
           L + VQ  A   L+   Q   ++AVE+      LP  L VV+ GL +     G HLLQ L
Sbjct: 61  LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112

Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
           A  +  AL +L  V+  +   R +L  + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145


>gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo
          sapiens]
          Length = 103

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
          G+ P +RA+      +       +  E+GG   GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58


>gi|239750175 PREDICTED: hypothetical protein XP_002347304 [Homo
           sapiens]
          Length = 155

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
           L + VQ  A   L+   Q   ++AVE+      LP  L VV+ GL +     G HLLQ L
Sbjct: 61  LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112

Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
           A  +  AL +L  V+  +   R +L  + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145


>gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo
          sapiens]
          Length = 103

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
          G+ P +RA+      +       +  E+GG   GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58


>gi|239744486 PREDICTED: hypothetical protein XP_002343172 [Homo
           sapiens]
          Length = 155

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
           L + VQ  A   L+   Q   ++AVE+      LP  L VV+ GL +     G HLLQ L
Sbjct: 61  LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112

Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
           A  +  AL +L  V+  +   R +L  + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145


>gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo
          sapiens]
          Length = 103

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
          G+ P +RA+      +       +  E+GG   GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58


>gi|171906567 peripheral benzodiazepine receptor-associated protein
           1 isoform b [Homo sapiens]
          Length = 1797

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 17/91 (18%)

Query: 34  GREDGGLAVGGQGSGEDSGSQRTVGESW--------GDFLSLRGLPDPILTITATPPPAV 85
           G E   L+VGG GS   SG Q +VG S         GD LSL   P+ +       PPAV
Sbjct: 679 GPELSFLSVGGGGSS--SGGQSSVGRSQPRPEEEDAGDELSLSPSPEGL-----GEPPAV 731

Query: 86  --PPRLLLFLQAATTLTGRHSGPQAVAELRG 114
             P RL++  Q A ++      P    EL G
Sbjct: 732 PYPRRLVVLKQLAHSVVLAWEPPPEQVELHG 762


>gi|171906559 peripheral benzodiazepine receptor-associated protein
           1 isoform a [Homo sapiens]
          Length = 1857

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 17/91 (18%)

Query: 34  GREDGGLAVGGQGSGEDSGSQRTVGESW--------GDFLSLRGLPDPILTITATPPPAV 85
           G E   L+VGG GS   SG Q +VG S         GD LSL   P+ +       PPAV
Sbjct: 739 GPELSFLSVGGGGSS--SGGQSSVGRSQPRPEEEDAGDELSLSPSPEGL-----GEPPAV 791

Query: 86  --PPRLLLFLQAATTLTGRHSGPQAVAELRG 114
             P RL++  Q A ++      P    EL G
Sbjct: 792 PYPRRLVVLKQLAHSVVLAWEPPPEQVELHG 822


>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 34  GREDGGLAVGGQGSGEDSGSQR----TVGESWGDFLSL 67
           G + GG AV G G G  SG +R    T G+S+  FL L
Sbjct: 770 GEDAGGAAVAGAGGGASSGPERFSCATCGQSFKHFLGL 807


>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 34  GREDGGLAVGGQGSGEDSGSQR----TVGESWGDFLSL 67
           G + GG AV G G G  SG +R    T G+S+  FL L
Sbjct: 770 GEDAGGAAVAGAGGGASSGPERFSCATCGQSFKHFLGL 807


>gi|148276998 zinc finger protein 628 [Homo sapiens]
          Length = 1055

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 61/226 (26%), Positives = 85/226 (37%), Gaps = 40/226 (17%)

Query: 67  LRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGR-HSGPQAVAELRGDGDEAGTHTPS 125
           L+ +P  +   T  PPPA P  +LL   +A    GR   GP+AV +    G  AG     
Sbjct: 717 LQLIPSSVQPPTPPPPPAPPKLILLPSSSAGAGGGRARQGPRAVGKA---GQGAGV---- 769

Query: 126 STRLWV--DKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
              +W+    GL        G+ GA   S    GT   L+ L   G G  G         
Sbjct: 770 ---VWLPGPGGL--------GVQGA--ASAGASGTGQSLIVLQNVGGGEAGP-------- 808

Query: 184 QPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQ-QDAR--GRHLLQPLA- 239
           Q  +G  LQ      EV  V+++   +     L   ++   VQ Q A+      LQP+A 
Sbjct: 809 QEMSGVQLQPLRPAPEVTTVQLQPAQEVTTVQLQPAQEVTTVQLQPAQEVTTVQLQPVAG 868

Query: 240 -----AGVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRV 280
                +G A A     ++VV      + L G G      G A   V
Sbjct: 869 QLSNSSGGAVATEAPNLLVVQSGAAEELLTGPGPGEAGDGEASTGV 914


>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
           sapiens]
          Length = 166

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
           L++  +PQ      AGGQ G   A E E   + LP A   VE+G    ++ RG     P 
Sbjct: 93  LEKRSEPQPEEGSPAGGQKGGAPA-EGEGAAETLPEASRAVENGCCTPKEGRG----APA 147

Query: 239 AAGVAAA 245
            AG ++A
Sbjct: 148 EAGESSA 154


>gi|4502131 amyloid beta A4 precursor protein-binding, family B,
           member 1 isoform E9 [Homo sapiens]
          Length = 710

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 22/90 (24%)

Query: 6   MMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGESWG--- 62
           ++HL S   L A  AA           +G    GL +  Q  G D G ++  GE+     
Sbjct: 113 LIHLYSELELSAHNAA----------NRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEE 162

Query: 63  ---------DFLSLRGLPDPILTITATPPP 83
                    D  S  GLP+P+ ++ A P P
Sbjct: 163 DDDDEEEEEDLSSPPGLPEPLESVEAPPRP 192


>gi|22035554 amyloid beta A4 precursor protein-binding, family B,
           member 1 isoform delta E9 [Homo sapiens]
          Length = 708

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 22/90 (24%)

Query: 6   MMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGESWG--- 62
           ++HL S   L A  AA           +G    GL +  Q  G D G ++  GE+     
Sbjct: 113 LIHLYSELELSAHNAA----------NRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEE 162

Query: 63  ---------DFLSLRGLPDPILTITATPPP 83
                    D  S  GLP+P+ ++ A P P
Sbjct: 163 DDDDEEEEEDLSSPPGLPEPLESVEAPPRP 192


>gi|156616271 kinesin family member 19 [Homo sapiens]
          Length = 998

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 168 RGAGIRGQVRPLQRCVQPQAGPTLQAG-GQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQ 226
           RG   RG +R +Q  VQ  +G   +AG GQL E +A   ++ +      L +    + VQ
Sbjct: 392 RGRQDRGDIRHIQAEVQLHSGQGEKAGMGQLREQLASAFQEQMDVRRRLLELENRAMEVQ 451

Query: 227 QDARGRHLL 235
            D   RHLL
Sbjct: 452 IDT-SRHLL 459


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapiens]
          Length = 1435

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 5/112 (4%)

Query: 11   SNPWLRAKMAACSR--DTLRVLLQQGREDGGLAVGGQGSGEDS--GSQRTVGESWGDFLS 66
            ++PW  +  A  +R  D    L+ +G  D  L +  +     S  GS   V  S      
Sbjct: 1096 ASPWASSSPARVTRREDLTHALVWEGGSDPLLELSAEDLRTLSPRGSLLDVATSPAGTSG 1155

Query: 67   LRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDE 118
               LP   L  TA+ PPAVPP+    L+ A  L  +        E  G+  E
Sbjct: 1156 RLELPAQ-LERTASKPPAVPPKTEKALRRAKKLASKRRKTDQAQEKHGESQE 1206


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
            sapiens]
          Length = 2715

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 71   PDPILTITATPPPAVPPRLLLFLQAATTLTGRH---SGPQAVAELRGDGDEAGTHTP 124
            P P LT+  +  PA PPR  + ++  +T +GR      P     L  DG EA   TP
Sbjct: 2256 PPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDG-EASEDTP 2311


>gi|149363674 hypothetical protein LOC25758 [Homo sapiens]
          Length = 1855

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 30/99 (30%)

Query: 77   ITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAGTHTPSSTRLWVDKG-- 134
            +  +PPP VPPR               +GP AVA LR    + G    S TR+    G  
Sbjct: 1640 VMGSPPPPVPPR---------------TGPVAVASLRRSTSDIG----SKTRMAESTGPE 1680

Query: 135  ---LHEAAELIQ------GIDGADQLSLQQEGTWTYLVY 164
               LH++A   Q       +   DQ +L   G     V+
Sbjct: 1681 PAQLHDSASFTQMSRGPVSVTQLDQSALNYSGNTVPAVF 1719


>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
           sapiens]
          Length = 501

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 319 AIPSPCKLWFIGKCLVSSKAR-----LMTGPLRRALMESYLVKEVLQAAMKLVLLVRWDP 373
           A P  C+ +  G+C   ++ R         P R A  E+   K  L+ A  ++  +RWDP
Sbjct: 41  APPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDP 100

Query: 374 HV 375
            +
Sbjct: 101 RL 102


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 34  GREDGGLAVGGQGSGEDSGSQRTVGESWGDFLSLRGLPDPILTITATPPP---AVPPRLL 90
           GR  G  A GG G+G   G  R + +S G      G        T  PPP   A P    
Sbjct: 360 GRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQS 419

Query: 91  LFLQAATTLTGRHSG 105
           L   AA   TG+ SG
Sbjct: 420 LGGPAAAYATGKASG 434


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)

Query: 70  LPDPILTITATPPPAVPPRLLL 91
           LP P L+  ATPPP  PP L L
Sbjct: 381 LPSPPLSPLATPPPQAPPALAL 402


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)

Query: 70  LPDPILTITATPPPAVPPRLLL 91
           LP P L+  ATPPP  PP L L
Sbjct: 342 LPSPPLSPLATPPPQAPPALAL 363


>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
           sapiens]
          Length = 912

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARG 231
           L++  +PQ      AGGQ G   A E E   + LP A   VE+G    ++ RG
Sbjct: 93  LEKRSEPQPEEGSPAGGQKGGAPA-EGEGAAETLPEASRAVENGCCTPKEGRG 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,668,458
Number of Sequences: 37866
Number of extensions: 915801
Number of successful extensions: 3496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3442
Number of HSP's gapped (non-prelim): 90
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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