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Search of human proteins with 239757516
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757516 PREDICTED: hypothetical protein [Homo sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757516 PREDICTED: hypothetical protein [Homo sapiens] 903 0.0
gi|239752032 PREDICTED: hypothetical protein XP_002348072 [Homo ... 897 0.0
gi|239746516 PREDICTED: hypothetical protein XP_002343750 [Homo ... 897 0.0
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] 37 0.028
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ... 37 0.028
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ... 37 0.028
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.31
gi|239755661 PREDICTED: hypothetical protein [Homo sapiens] 32 0.90
gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo ... 32 0.90
gi|239750175 PREDICTED: hypothetical protein XP_002347304 [Homo ... 32 0.90
gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo ... 32 0.90
gi|239744486 PREDICTED: hypothetical protein XP_002343172 [Homo ... 32 0.90
gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo ... 32 0.90
gi|171906567 peripheral benzodiazepine receptor-associated prote... 32 0.90
gi|171906559 peripheral benzodiazepine receptor-associated prote... 32 0.90
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 32 1.5
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 32 1.5
gi|148276998 zinc finger protein 628 [Homo sapiens] 32 1.5
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho... 31 2.6
gi|4502131 amyloid beta A4 precursor protein-binding, family B, ... 30 3.4
gi|22035554 amyloid beta A4 precursor protein-binding, family B,... 30 3.4
gi|156616271 kinesin family member 19 [Homo sapiens] 30 3.4
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi... 30 4.5
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 30 4.5
gi|149363674 hypothetical protein LOC25758 [Homo sapiens] 30 4.5
gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap... 30 4.5
gi|153792074 proline rich 12 [Homo sapiens] 30 4.5
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 5.8
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 30 5.8
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 30 5.8
>gi|239757516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 451
Score = 903 bits (2334), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES
Sbjct: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
Query: 61 WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61 WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
>gi|239752032 PREDICTED: hypothetical protein XP_002348072 [Homo
sapiens]
Length = 451
Score = 897 bits (2318), Expect = 0.0
Identities = 448/451 (99%), Positives = 449/451 (99%)
Query: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGRED GLAVGGQGSGEDSGSQRTVGES
Sbjct: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDSGLAVGGQGSGEDSGSQRTVGES 60
Query: 61 WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
WG+FLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61 WGNFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
HTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 AHTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
>gi|239746516 PREDICTED: hypothetical protein XP_002343750 [Homo
sapiens]
Length = 451
Score = 897 bits (2318), Expect = 0.0
Identities = 448/451 (99%), Positives = 449/451 (99%)
Query: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGES 60
MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGRED GLAVGGQGSGEDSGSQRTVGES
Sbjct: 1 MSVACMMHLGSNPWLRAKMAACSRDTLRVLLQQGREDSGLAVGGQGSGEDSGSQRTVGES 60
Query: 61 WGDFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
WG+FLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG
Sbjct: 61 WGNFLSLRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAG 120
Query: 121 THTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
HTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ
Sbjct: 121 AHTPSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQ 180
Query: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA
Sbjct: 181 RCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPLAA 240
Query: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP
Sbjct: 241 GVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRVSAQLQLRSFSSRRAELSISP 300
Query: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ
Sbjct: 301 GTPPCLTPFPIAGCHLGLAIPSPCKLWFIGKCLVSSKARLMTGPLRRALMESYLVKEVLQ 360
Query: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE
Sbjct: 361 AAMKLVLLVRWDPHVTGQLISWQEVEAAAISHSCPTSHHPQHFPKRGIQLQNSKPTRDVE 420
Query: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
SEDQVLAVSHRANHLTSLSLSFFICKMDNRH
Sbjct: 421 SEDQVLAVSHRANHLTSLSLSFFICKMDNRH 451
>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 37.4 bits (85), Expect = 0.028
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
P T V G H ++Q + G L + Q+ L RR + G RPL
Sbjct: 57 PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 105
Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
PQAG +LQ G L AV + R AA+ V E GLAV Q+
Sbjct: 106 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 164
Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
+A +A AL ++ + V V +G R Q+LG A
Sbjct: 165 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 197
>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
sapiens]
Length = 346
Score = 37.4 bits (85), Expect = 0.028
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
P T V G H ++Q + G L + Q+ L RR + G RPL
Sbjct: 122 PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 170
Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
PQAG +LQ G L AV + R AA+ V E GLAV Q+
Sbjct: 171 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 229
Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
+A +A AL ++ + V V +G R Q+LG A
Sbjct: 230 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 262
>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
sapiens]
Length = 346
Score = 37.4 bits (85), Expect = 0.028
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 124 PSSTRLWVDKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
P T V G H ++Q + G L + Q+ L RR + G RPL
Sbjct: 122 PPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQ--------LPRRVGHLEGGQRPL---A 170
Query: 184 QPQAGPTLQ-------AGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQ 236
PQAG +LQ G L AV + R AA+ V E GLAV Q+
Sbjct: 171 APQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAE-GLAVAQEPVQPQRRL 229
Query: 237 PLAAGVAAALLVLAIVVVAVAQG-RQQLLGEGA 268
+A +A AL ++ + V V +G R Q+LG A
Sbjct: 230 QVARALAPALSLVLLQSVPVRRGQRHQVLGREA 262
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.9 bits (76), Expect = 0.31
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 67 LRGLPDPILTITATPPPAVPPRLLL 91
L+GLP P L+ ATPPP PP L L
Sbjct: 603 LQGLPSPPLSPLATPPPQAPPXLAL 627
>gi|239755661 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 32.3 bits (72), Expect = 0.90
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
L + VQ A L+ Q ++AVE+ LP L VV+ GL + G HLLQ L
Sbjct: 61 LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112
Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
A + AL +L V+ + R +L + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145
>gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo
sapiens]
Length = 103
Score = 32.3 bits (72), Expect = 0.90
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
G+ P +RA+ + + E+GG GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58
>gi|239750175 PREDICTED: hypothetical protein XP_002347304 [Homo
sapiens]
Length = 155
Score = 32.3 bits (72), Expect = 0.90
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
L + VQ A L+ Q ++AVE+ LP L VV+ GL + G HLLQ L
Sbjct: 61 LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112
Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
A + AL +L V+ + R +L + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145
>gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo
sapiens]
Length = 103
Score = 32.3 bits (72), Expect = 0.90
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
G+ P +RA+ + + E+GG GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58
>gi|239744486 PREDICTED: hypothetical protein XP_002343172 [Homo
sapiens]
Length = 155
Score = 32.3 bits (72), Expect = 0.90
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
L + VQ A L+ Q ++AVE+ LP L VV+ GL + G HLLQ L
Sbjct: 61 LLQLVQLLARALLELCAQRLHLLAVELH---LLLPLLLEVVQVGLHL-----GLHLLQIL 112
Query: 239 AAGVAAALLVLAIVVVAVAQGRQQLLGEGAHGG 271
A + AL +L V+ + R +L + A GG
Sbjct: 113 AHLLPQALCLLFQVIPELLGHRAELFAQLAEGG 145
>gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo
sapiens]
Length = 103
Score = 32.3 bits (72), Expect = 0.90
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 10 GSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVG 58
G+ P +RA+ + + E+GG GG G G +SGSQR VG
Sbjct: 17 GAGPRIRARRGRSEEE-------EEEEEGGGREGGGGGGGESGSQRPVG 58
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 32.3 bits (72), Expect = 0.90
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 17/91 (18%)
Query: 34 GREDGGLAVGGQGSGEDSGSQRTVGESW--------GDFLSLRGLPDPILTITATPPPAV 85
G E L+VGG GS SG Q +VG S GD LSL P+ + PPAV
Sbjct: 679 GPELSFLSVGGGGSS--SGGQSSVGRSQPRPEEEDAGDELSLSPSPEGL-----GEPPAV 731
Query: 86 --PPRLLLFLQAATTLTGRHSGPQAVAELRG 114
P RL++ Q A ++ P EL G
Sbjct: 732 PYPRRLVVLKQLAHSVVLAWEPPPEQVELHG 762
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 32.3 bits (72), Expect = 0.90
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 17/91 (18%)
Query: 34 GREDGGLAVGGQGSGEDSGSQRTVGESW--------GDFLSLRGLPDPILTITATPPPAV 85
G E L+VGG GS SG Q +VG S GD LSL P+ + PPAV
Sbjct: 739 GPELSFLSVGGGGSS--SGGQSSVGRSQPRPEEEDAGDELSLSPSPEGL-----GEPPAV 791
Query: 86 --PPRLLLFLQAATTLTGRHSGPQAVAELRG 114
P RL++ Q A ++ P EL G
Sbjct: 792 PYPRRLVVLKQLAHSVVLAWEPPPEQVELHG 822
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 34 GREDGGLAVGGQGSGEDSGSQR----TVGESWGDFLSL 67
G + GG AV G G G SG +R T G+S+ FL L
Sbjct: 770 GEDAGGAAVAGAGGGASSGPERFSCATCGQSFKHFLGL 807
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 34 GREDGGLAVGGQGSGEDSGSQR----TVGESWGDFLSL 67
G + GG AV G G G SG +R T G+S+ FL L
Sbjct: 770 GEDAGGAAVAGAGGGASSGPERFSCATCGQSFKHFLGL 807
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 31.6 bits (70), Expect = 1.5
Identities = 61/226 (26%), Positives = 85/226 (37%), Gaps = 40/226 (17%)
Query: 67 LRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGR-HSGPQAVAELRGDGDEAGTHTPS 125
L+ +P + T PPPA P +LL +A GR GP+AV + G AG
Sbjct: 717 LQLIPSSVQPPTPPPPPAPPKLILLPSSSAGAGGGRARQGPRAVGKA---GQGAGV---- 769
Query: 126 STRLWV--DKGLHEAAELIQGIDGADQLSLQQEGTWTYLVYLYRRGAGIRGQVRPLQRCV 183
+W+ GL G+ GA S GT L+ L G G G
Sbjct: 770 ---VWLPGPGGL--------GVQGA--ASAGASGTGQSLIVLQNVGGGEAGP-------- 808
Query: 184 QPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQ-QDAR--GRHLLQPLA- 239
Q +G LQ EV V+++ + L ++ VQ Q A+ LQP+A
Sbjct: 809 QEMSGVQLQPLRPAPEVTTVQLQPAQEVTTVQLQPAQEVTTVQLQPAQEVTTVQLQPVAG 868
Query: 240 -----AGVAAALLVLAIVVVAVAQGRQQLLGEGAHGGHQGLAEDRV 280
+G A A ++VV + L G G G A V
Sbjct: 869 QLSNSSGGAVATEAPNLLVVQSGAAEELLTGPGPGEAGDGEASTGV 914
>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
sapiens]
Length = 166
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARGRHLLQPL 238
L++ +PQ AGGQ G A E E + LP A VE+G ++ RG P
Sbjct: 93 LEKRSEPQPEEGSPAGGQKGGAPA-EGEGAAETLPEASRAVENGCCTPKEGRG----APA 147
Query: 239 AAGVAAA 245
AG ++A
Sbjct: 148 EAGESSA 154
>gi|4502131 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform E9 [Homo sapiens]
Length = 710
Score = 30.4 bits (67), Expect = 3.4
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 22/90 (24%)
Query: 6 MMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGESWG--- 62
++HL S L A AA +G GL + Q G D G ++ GE+
Sbjct: 113 LIHLYSELELSAHNAA----------NRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEE 162
Query: 63 ---------DFLSLRGLPDPILTITATPPP 83
D S GLP+P+ ++ A P P
Sbjct: 163 DDDDEEEEEDLSSPPGLPEPLESVEAPPRP 192
>gi|22035554 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform delta E9 [Homo sapiens]
Length = 708
Score = 30.4 bits (67), Expect = 3.4
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 22/90 (24%)
Query: 6 MMHLGSNPWLRAKMAACSRDTLRVLLQQGREDGGLAVGGQGSGEDSGSQRTVGESWG--- 62
++HL S L A AA +G GL + Q G D G ++ GE+
Sbjct: 113 LIHLYSELELSAHNAA----------NRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEE 162
Query: 63 ---------DFLSLRGLPDPILTITATPPP 83
D S GLP+P+ ++ A P P
Sbjct: 163 DDDDEEEEEDLSSPPGLPEPLESVEAPPRP 192
>gi|156616271 kinesin family member 19 [Homo sapiens]
Length = 998
Score = 30.4 bits (67), Expect = 3.4
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 168 RGAGIRGQVRPLQRCVQPQAGPTLQAG-GQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQ 226
RG RG +R +Q VQ +G +AG GQL E +A ++ + L + + VQ
Sbjct: 392 RGRQDRGDIRHIQAEVQLHSGQGEKAGMGQLREQLASAFQEQMDVRRRLLELENRAMEVQ 451
Query: 227 QDARGRHLL 235
D RHLL
Sbjct: 452 IDT-SRHLL 459
>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapiens]
Length = 1435
Score = 30.0 bits (66), Expect = 4.5
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 11 SNPWLRAKMAACSR--DTLRVLLQQGREDGGLAVGGQGSGEDS--GSQRTVGESWGDFLS 66
++PW + A +R D L+ +G D L + + S GS V S
Sbjct: 1096 ASPWASSSPARVTRREDLTHALVWEGGSDPLLELSAEDLRTLSPRGSLLDVATSPAGTSG 1155
Query: 67 LRGLPDPILTITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDE 118
LP L TA+ PPAVPP+ L+ A L + E G+ E
Sbjct: 1156 RLELPAQ-LERTASKPPAVPPKTEKALRRAKKLASKRRKTDQAQEKHGESQE 1206
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 30.0 bits (66), Expect = 4.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 71 PDPILTITATPPPAVPPRLLLFLQAATTLTGRH---SGPQAVAELRGDGDEAGTHTP 124
P P LT+ + PA PPR + ++ +T +GR P L DG EA TP
Sbjct: 2256 PPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDG-EASEDTP 2311
>gi|149363674 hypothetical protein LOC25758 [Homo sapiens]
Length = 1855
Score = 30.0 bits (66), Expect = 4.5
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 30/99 (30%)
Query: 77 ITATPPPAVPPRLLLFLQAATTLTGRHSGPQAVAELRGDGDEAGTHTPSSTRLWVDKG-- 134
+ +PPP VPPR +GP AVA LR + G S TR+ G
Sbjct: 1640 VMGSPPPPVPPR---------------TGPVAVASLRRSTSDIG----SKTRMAESTGPE 1680
Query: 135 ---LHEAAELIQ------GIDGADQLSLQQEGTWTYLVY 164
LH++A Q + DQ +L G V+
Sbjct: 1681 PAQLHDSASFTQMSRGPVSVTQLDQSALNYSGNTVPAVF 1719
>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
sapiens]
Length = 501
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 319 AIPSPCKLWFIGKCLVSSKAR-----LMTGPLRRALMESYLVKEVLQAAMKLVLLVRWDP 373
A P C+ + G+C ++ R P R A E+ K L+ A ++ +RWDP
Sbjct: 41 APPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDP 100
Query: 374 HV 375
+
Sbjct: 101 RL 102
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 30.0 bits (66), Expect = 4.5
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 34 GREDGGLAVGGQGSGEDSGSQRTVGESWGDFLSLRGLPDPILTITATPPP---AVPPRLL 90
GR G A GG G+G G R + +S G G T PPP A P
Sbjct: 360 GRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQS 419
Query: 91 LFLQAATTLTGRHSG 105
L AA TG+ SG
Sbjct: 420 LGGPAAAYATGKASG 434
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 29.6 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 70 LPDPILTITATPPPAVPPRLLL 91
LP P L+ ATPPP PP L L
Sbjct: 381 LPSPPLSPLATPPPQAPPALAL 402
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 29.6 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 70 LPDPILTITATPPPAVPPRLLL 91
LP P L+ ATPPP PP L L
Sbjct: 342 LPSPPLSPLATPPPQAPPALAL 363
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 179 LQRCVQPQAGPTLQAGGQLGEVVAVEVEDDLQRLPAALNVVEDGLAVQQDARG 231
L++ +PQ AGGQ G A E E + LP A VE+G ++ RG
Sbjct: 93 LEKRSEPQPEEGSPAGGQKGGAPA-EGEGAAETLPEASRAVENGCCTPKEGRG 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,668,458
Number of Sequences: 37866
Number of extensions: 915801
Number of successful extensions: 3496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3442
Number of HSP's gapped (non-prelim): 90
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.