BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239757441 PREDICTED: hypothetical protein [Homo sapiens] (167 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239757441 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90 gi|239751958 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90 gi|239746441 PREDICTED: hypothetical protein XP_002344223 [Homo ... 327 2e-90 gi|106879210 Src homology 2 domain containing adaptor protein B ... 31 0.56 gi|169161002 PREDICTED: hypothetical protein [Homo sapiens] 30 0.74 gi|169162097 PREDICTED: hypothetical protein [Homo sapiens] 30 0.74 gi|169161240 PREDICTED: hypothetical protein [Homo sapiens] 30 0.74 gi|30348954 mindbomb homolog 1 [Homo sapiens] 30 0.74 gi|239752797 PREDICTED: hypothetical protein [Homo sapiens] 29 1.6 gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo ... 29 1.6 gi|239745962 PREDICTED: hypothetical protein XP_002343626 [Homo ... 29 1.6 gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo ... 29 1.6 gi|124430752 kinesin family member 26B [Homo sapiens] 29 1.6 gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 29 2.1 gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 29 2.1 gi|134288906 tripartite motif-containing 67 [Homo sapiens] 29 2.1 gi|126090909 engrailed homeobox 1 [Homo sapiens] 28 3.7 gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 28 3.7 gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 28 3.7 gi|68989256 ras inhibitor RIN1 [Homo sapiens] 28 3.7 gi|11119430 testis-specific kinase substrate [Homo sapiens] 28 3.7 gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 28 3.7 gi|30387654 late cornified envelope 1A [Homo sapiens] 28 3.7 gi|30387648 late cornified envelope 1D [Homo sapiens] 28 4.8 gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo... 28 4.8 gi|126157477 hypothetical protein LOC79680 [Homo sapiens] 28 4.8 gi|116235448 hypothetical protein LOC81610 [Homo sapiens] 28 4.8 gi|30410035 late cornified envelope 5A [Homo sapiens] 27 6.2 gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 27 6.2 gi|14149746 nuclear receptor subfamily 2, group F, member 2 isof... 27 8.1 >gi|239757441 PREDICTED: hypothetical protein [Homo sapiens] Length = 167 Score = 327 bits (839), Expect = 2e-90 Identities = 167/167 (100%), Positives = 167/167 (100%) Query: 1 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 60 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS Sbjct: 1 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 60 Query: 61 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 120 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT Sbjct: 61 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 120 Query: 121 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT Sbjct: 121 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 >gi|239751958 PREDICTED: hypothetical protein [Homo sapiens] Length = 205 Score = 327 bits (839), Expect = 2e-90 Identities = 167/167 (100%), Positives = 167/167 (100%) Query: 1 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 60 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS Sbjct: 39 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 98 Query: 61 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 120 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT Sbjct: 99 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 158 Query: 121 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT Sbjct: 159 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 205 >gi|239746441 PREDICTED: hypothetical protein XP_002344223 [Homo sapiens] Length = 205 Score = 327 bits (839), Expect = 2e-90 Identities = 167/167 (100%), Positives = 167/167 (100%) Query: 1 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 60 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS Sbjct: 39 MGTVHVQVQVLLGGARVAAILADVELVPPLLIGILLLHPMDFLQVEGVVEALAAEGAQVS 98 Query: 61 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 120 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT Sbjct: 99 FHLVVALEVTVQHALQTEALATQVTAVNHRVAARACVVLTLRGALPFPRPCSGAPRTTGT 158 Query: 121 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT Sbjct: 159 ASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 205 >gi|106879210 Src homology 2 domain containing adaptor protein B [Homo sapiens] Length = 509 Score = 30.8 bits (68), Expect = 0.56 Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 139 AAGCCGGASGQGCPGAQGSPNSQPHL 164 AAGCC +SG G + S + PHL Sbjct: 136 AAGCCCASSGAGAAASSSSSSGSPHL 161 >gi|169161002 PREDICTED: hypothetical protein [Homo sapiens] Length = 165 Score = 30.4 bits (67), Expect = 0.74 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 44 QVEGVVEALAAEGAQVSFHLVVALEVTVQHALQTEALATQVTAVNHRVAARAC-VVLTLR 102 QV + E LAA GA++ ++A + Q EA +T T V R+ AR C +V R Sbjct: 64 QVGALPETLAASGARMWPLALMAAPMAQQRGTLAEAASTVATCV--RLLARVCALVAHQR 121 Query: 103 GAL 105 GAL Sbjct: 122 GAL 124 >gi|169162097 PREDICTED: hypothetical protein [Homo sapiens] Length = 165 Score = 30.4 bits (67), Expect = 0.74 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 44 QVEGVVEALAAEGAQVSFHLVVALEVTVQHALQTEALATQVTAVNHRVAARAC-VVLTLR 102 QV + E LAA GA++ ++A + Q EA +T T V R+ AR C +V R Sbjct: 64 QVGALPETLAASGARMWPLALMAAPMAQQRGTLAEAASTVATCV--RLLARVCALVAHQR 121 Query: 103 GAL 105 GAL Sbjct: 122 GAL 124 >gi|169161240 PREDICTED: hypothetical protein [Homo sapiens] Length = 165 Score = 30.4 bits (67), Expect = 0.74 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 44 QVEGVVEALAAEGAQVSFHLVVALEVTVQHALQTEALATQVTAVNHRVAARAC-VVLTLR 102 QV + E LAA GA++ ++A + Q EA +T T V R+ AR C +V R Sbjct: 64 QVGALPETLAASGARMWPLALMAAPMAQQRGTLAEAASTVATCV--RLLARVCALVAHQR 121 Query: 103 GAL 105 GAL Sbjct: 122 GAL 124 >gi|30348954 mindbomb homolog 1 [Homo sapiens] Length = 1006 Score = 30.4 bits (67), Expect = 0.74 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 87 VNHRVAARACVVLTLRGALPFPRPCSGAPRTTGTASCVAAVALLQEVV-RRVPAAGCCGG 145 V R CVV + + A +PC A+ + + VV RRVP CCGG Sbjct: 857 VQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGG 916 Query: 146 ASGQ 149 S + Sbjct: 917 KSSE 920 >gi|239752797 PREDICTED: hypothetical protein [Homo sapiens] Length = 347 Score = 29.3 bits (64), Expect = 1.6 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 113 GAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPH 163 G R G A V L +EV + AA GA +GCPGAQ ++Q H Sbjct: 164 GGARGLGRAGGPVGVQLPREVGGTLGAAAQAKGA--EGCPGAQRPFHAQDH 212 >gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo sapiens] Length = 347 Score = 29.3 bits (64), Expect = 1.6 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 113 GAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPH 163 G R G A V L +EV + AA GA +GCPGAQ ++Q H Sbjct: 164 GGARGLGRAGGPVGVQLPREVGGTLGAAAQAKGA--EGCPGAQRPFHAQDH 212 >gi|239745962 PREDICTED: hypothetical protein XP_002343626 [Homo sapiens] Length = 398 Score = 29.3 bits (64), Expect = 1.6 Identities = 13/40 (32%), Positives = 20/40 (50%) Query: 128 ALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 ++ ++ RR G G +GC GA G P P L++T Sbjct: 313 SMFTDMARRGAGPGVSGRTQTRGCAGAGGRPPGAPGLALT 352 >gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo sapiens] Length = 347 Score = 29.3 bits (64), Expect = 1.6 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 113 GAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPH 163 G R G A V L +EV + AA GA +GCPGAQ ++Q H Sbjct: 164 GGARGLGRAGGPVGVQLPREVGGTLGAAAQAKGA--EGCPGAQRPFHAQDH 212 >gi|124430752 kinesin family member 26B [Homo sapiens] Length = 2108 Score = 29.3 bits (64), Expect = 1.6 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 93 ARACVVLTLRGALPFPRPCSGAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCP 152 ++ C V T +G LP P P + + +G AS +LLQ VR P Sbjct: 1086 SQRCKVYTQKGVLPSPAPLPPSSKDSGVAS---RESLLQPEVRTPPVGMSPQVLKKSMSA 1142 Query: 153 GAQGSPNS 160 G++G P + Sbjct: 1143 GSEGFPET 1150 >gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] Length = 1516 Score = 28.9 bits (63), Expect = 2.1 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 115 PRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 P+ TG V + L+ +VP CCGGA G G + +P P L +T Sbjct: 5 PKLTGETLIVHHIPLVH---CQVPDRQCCGGAGGGG-GSTRPNPFCPPELGIT 53 >gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] Length = 1516 Score = 28.9 bits (63), Expect = 2.1 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 115 PRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPHLSVT 167 P+ TG V + L+ +VP CCGGA G G + +P P L +T Sbjct: 5 PKLTGETLIVHHIPLVH---CQVPDRQCCGGAGGGG-GSTRPNPFCPPELGIT 53 >gi|134288906 tripartite motif-containing 67 [Homo sapiens] Length = 783 Score = 28.9 bits (63), Expect = 2.1 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 93 ARACVVLTLRGALPFPRPCSGAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCP 152 AR V T G P+P R +G + AA A L+ PA G GG++ G Sbjct: 31 ARTIAVQTPDGEQHLPQPLL-LSRGSGLQAGAAAAASLEHDAAAGPACGGAGGSAAGGLG 89 Query: 153 GAQG 156 G G Sbjct: 90 GGAG 93 >gi|126090909 engrailed homeobox 1 [Homo sapiens] Length = 392 Score = 28.1 bits (61), Expect = 3.7 Identities = 14/46 (30%), Positives = 18/46 (39%) Query: 112 SGAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGS 157 +G P A+ A A + G G G G PGAQG+ Sbjct: 195 AGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQGT 240 >gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo sapiens] Length = 258 Score = 28.1 bits (61), Expect = 3.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Query: 130 LQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQP 162 LQ ++ P GC G +G+G GSP++ P Sbjct: 146 LQLLLLLAPGRGCARGRAGEGRAQCAGSPSTAP 178 >gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo sapiens] Length = 258 Score = 28.1 bits (61), Expect = 3.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Query: 130 LQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQP 162 LQ ++ P GC G +G+G GSP++ P Sbjct: 146 LQLLLLLAPGRGCARGRAGEGRAQCAGSPSTAP 178 >gi|68989256 ras inhibitor RIN1 [Homo sapiens] Length = 783 Score = 28.1 bits (61), Expect = 3.7 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%) Query: 143 CGGASG---QGCPGAQGSPNSQPHL 164 CG S +G PG++GSP + PHL Sbjct: 316 CGSPSSSEEEGVPGSRGSPATSPHL 340 >gi|11119430 testis-specific kinase substrate [Homo sapiens] Length = 592 Score = 28.1 bits (61), Expect = 3.7 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%) Query: 146 ASGQGCPGAQGSPN--SQPH 163 A+ QGCPG GSP+ S+PH Sbjct: 277 ATSQGCPGPPGSPDKPSRPH 296 >gi|118498345 AT-binding transcription factor 1 [Homo sapiens] Length = 3703 Score = 28.1 bits (61), Expect = 3.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Query: 126 AVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPH 163 +V LQE+V VP G GG+ G G G G H Sbjct: 3493 SVVNLQEMVLHVPTGGGGGGSGGGGGGGGGGGGGGSYH 3530 >gi|30387654 late cornified envelope 1A [Homo sapiens] Length = 110 Score = 28.1 bits (61), Expect = 3.7 Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 137 VPAAGCCGGASGQGCPGAQG 156 V + GCCG +SG GC G Sbjct: 46 VSSGGCCGSSSGGGCSSGGG 65 >gi|30387648 late cornified envelope 1D [Homo sapiens] Length = 114 Score = 27.7 bits (60), Expect = 4.8 Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 137 VPAAGCCGGASGQGCPGAQG 156 V + GCCG +SG GC G Sbjct: 42 VSSGGCCGSSSGGGCGSNSG 61 >gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo sapiens] Length = 938 Score = 27.7 bits (60), Expect = 4.8 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 8/46 (17%) Query: 107 FPRPCSGAPRTTGTASCVAA--------VALLQEVVRRVPAAGCCG 144 FPRP P GT +CV A V L V++ AAG G Sbjct: 369 FPRPIQSWPGAAGTTACVCADTVYYYQMVPRLTAVLQTAMAAGSLG 414 >gi|126157477 hypothetical protein LOC79680 [Homo sapiens] Length = 364 Score = 27.7 bits (60), Expect = 4.8 Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 123 CVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQPH 163 C V + + ++ A+G CGG + P A P+S+PH Sbjct: 52 CGDTVCVRTTMEQKSTASGTCGGKPAERGPLAGHMPSSRPH 92 >gi|116235448 hypothetical protein LOC81610 [Homo sapiens] Length = 615 Score = 27.7 bits (60), Expect = 4.8 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 93 ARACVVLTLRGALPFPRPCSGAPRTTGTASCVAAVALLQEVVRRVPAA 140 ARAC++ L P R C+ G +S AA+ALL E + VPAA Sbjct: 2 ARACLIQRL----PIKRDCTPV-FVRGLSSPSAAMALLSEGLDEVPAA 44 >gi|30410035 late cornified envelope 5A [Homo sapiens] Length = 118 Score = 27.3 bits (59), Expect = 6.2 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 8/57 (14%) Query: 106 PFPRPCS--------GAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGA 154 P P P S G + G C++ Q + RR ++ CCG SGQ G+ Sbjct: 43 PCPPPVSSCCGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGS 99 >gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] Length = 558 Score = 27.3 bits (59), Expect = 6.2 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Query: 43 LQVEGVVEALAAEGAQVSFHLVV---ALEVT--VQHALQTEALATQVTAVNHRVAARACV 97 L+ E V +A A +GA H V A+ VT V T V +A R+ V Sbjct: 44 LKTESVTQAKAGDGAMTRTHTVTYREAMAVTREVIKVEDTTKTRVMVETKTKPLAERSIV 103 Query: 98 VLTLRGALPFPRPCSGAPRTTGTASCVAAVALLQEVVR 135 T A+P R +T T S V VA+++ +R Sbjct: 104 PQTKSKAMPMSRV------STVTKSEVKVVAVIEANIR 135 >gi|14149746 nuclear receptor subfamily 2, group F, member 2 isoform a [Homo sapiens] Length = 414 Score = 26.9 bits (58), Expect = 8.1 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 8/58 (13%) Query: 104 ALPFPRPCSGAPRTTGTASCVAAVALLQEVVRRVPAAGCCGGASGQGCPGAQGSPNSQ 161 A P P P GAP T T Q PA GG G G PG+ Q Sbjct: 26 APPVPGPPPGAPHTPQTPG--------QGGPASTPAQTAAGGQGGPGGPGSDKQQQQQ 75 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,318,109 Number of Sequences: 37866 Number of extensions: 267504 Number of successful extensions: 1519 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1491 Number of HSP's gapped (non-prelim): 52 length of query: 167 length of database: 18,247,518 effective HSP length: 95 effective length of query: 72 effective length of database: 14,650,248 effective search space: 1054817856 effective search space used: 1054817856 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.