Guide to the Human Genome
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Name: ARMCX5 Sequence: fasta or formatted (558aa) NCBI GI: 41054846
Description:

armadillo repeat containing, X-linked 5

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         37           1
 C cysteine            1.1          6           1
 D aspartate           3.4         19           2
 E glutamate           9.0         50           3
 F phenylalanine       3.2         18           1
 G glycine             5.0         28           2
 H histidine           2.3         13           1
 I isoleucine          7.2         40           2
 K lysine              9.9         55           2
 L leucine             7.5         42           2
 M methionine          2.0         11           1
 N asparagine          3.6         20           2
 P proline             6.1         34           2
 Q glutamine           3.4         19           1
 R arginine            3.9         22           2
 S serine              7.9         44           2
 T threonine           7.3         41           2
 V valine              7.2         40           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.3         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   armadillo repeat containing, X-linked 5 
LOC100292655          0.180   PREDICTED: similar to armadillo repeat containing, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.174   basic helix-loop-helix domain containing, class B, 9...
GPRASP1               0.159   G protein-coupled receptor associated sorting prote...
GPRASP1               0.159   G protein-coupled receptor associated sorting prote...
GPRASP1               0.159   G protein-coupled receptor associated sorting prote...
GPRASP2               0.136   G protein-coupled receptor associated sorting protei...
GPRASP2               0.136   G protein-coupled receptor associated sorting protei...
ARMCX3                0.118   armadillo repeat containing, X-linked 3 
ARMCX3                0.118   armadillo repeat containing, X-linked 3 
ARMCX3                0.118   armadillo repeat containing, X-linked 3 
ARMCX1                0.117   armadillo repeat containing, X-linked 1 
ARMC10                0.107   SVH protein isoform b 
ARMC10                0.107   SVH protein isoform a 
LOC389137             0.083   PREDICTED: similar to SVH protein isoform 1 
ARMC10                0.082   SVH protein isoform e 
ARMCX2                0.082   ALEX2 protein 
ARMCX2                0.082   ALEX2 protein 
LOC389137             0.082   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.082   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.051   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.050   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.050   PREDICTED: similar to SVH protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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