Guide to the Human Genome
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Search of human proteins with 239757302

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
         (204 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]            439   e-123
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]            439   e-123
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]            439   e-123
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p...    47   9e-06
gi|146261165 phospholipase inhibitor [Homo sapiens]                    45   4e-05
gi|110735433 CD177 molecule [Homo sapiens]                             42   4e-04
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ...    40   0.001
gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]              38   0.005
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]       35   0.058
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              34   0.075
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    34   0.075
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    34   0.075
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    34   0.075
gi|93004088 GPI-anchored metastasis-associated protein homolog [...    34   0.098
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ...    33   0.17 
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]             33   0.17 
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ...    32   0.29 
gi|4759226 transforming growth factor, beta receptor I isoform 1...    31   0.64 
gi|195963412 transforming growth factor, beta receptor I isoform...    31   0.64 
gi|24430141 fibrillin 1 precursor [Homo sapiens]                       30   1.1  
gi|66346695 fibrillin 2 precursor [Homo sapiens]                       30   1.1  
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]         30   1.9  
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]           30   1.9  
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]    30   1.9  
gi|21265052 ADAM metallopeptidase with thrombospondin type 1 mot...    30   1.9  
gi|110611167 ADAM metallopeptidase with thrombospondin type 1 mo...    30   1.9  
gi|38490568 keratin associated protein 10-4 [Homo sapiens]             29   2.4  
gi|239755070 PREDICTED: similar to proprotein convertase subtili...    29   3.2  
gi|21071008 transcobalamin I precursor [Homo sapiens]                  29   3.2  
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]      28   4.1  

>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score =  439 bits (1128), Expect = e-123
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
           MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60

Query: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
           TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120

Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
           ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180

Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
           KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204


>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score =  439 bits (1128), Expect = e-123
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
           MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60

Query: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
           TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120

Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
           ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180

Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
           KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204


>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score =  439 bits (1128), Expect = e-123
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
           MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1   MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60

Query: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
           TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61  TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120

Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
           ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180

Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
           KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204


>gi|4505865 plasminogen activator, urokinase receptor isoform 1
           precursor [Homo sapiens]
          Length = 335

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 15/161 (9%)

Query: 27  LHCEICTAAGSRCHG---QMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSG 83
           L C  C ++   C     Q   C S ++ C+ +V     +G+E        +R      G
Sbjct: 115 LECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 174

Query: 84  VISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGPMTH 143
              +     +       CC +  CN   + + L NL +NG  C +C  +    C    T 
Sbjct: 175 CPGSNGFHNNDTFHFLKCCNTTKCNEGPI-LELENLPQNGRQCYSCKGNSTHGCSSEETF 233

Query: 144 ---CTGKENHCVSLSGHVQAGIFKPR---FAMRGCATESMC 178
              C G  N C+     V  G  +P+   + +RGCAT SMC
Sbjct: 234 LIDCRGPMNQCL-----VATGTHEPKNQSYMVRGCATASMC 269



 Score = 33.1 bits (74), Expect = 0.17
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 8/150 (5%)

Query: 15  VLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGC 74
           +LL T +     L C  C   G  C  +++ C+  +D C   + +   +G+EL    K C
Sbjct: 11  LLLHTCVPASWGLRCMQCKTNGD-C--RVEECALGQDLCRTTIVRLWEEGEELELVEKSC 67

Query: 75  IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFR 134
             S+   +  +S   G K   +T    C  D CN       +T      L C +C +S  
Sbjct: 68  THSEKT-NRTLSYRTGLKITSLT-EVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDM 125

Query: 135 --DKCMGPMTHCTGKENHCVSLSGH-VQAG 161
             ++       C   E  C+ +  H +Q G
Sbjct: 126 SCERGRHQSLQCRSPEEQCLDVVTHWIQEG 155



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)

Query: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
           C G M  C         LV   T + K   +  +GC  +  C    +       +H+  S
Sbjct: 237 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 286

Query: 99  SFCCQSDGCNSAFLSV 114
             CC   GCN   L V
Sbjct: 287 --CCTKSGCNHPDLDV 300


>gi|146261165 phospholipase inhibitor [Homo sapiens]
          Length = 237

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 11/158 (6%)

Query: 27  LHCEICTAAGSRCHGQMKT-CSSDKDTCVLLVGKATSKGKELVHTYKGCIRS-----QDC 80
           L C  C +    C   + + C S  +T  +    A+S  +  V  Y+    S     ++ 
Sbjct: 20  LSCVQCNSWEKSCVNSIASECPSHANTSCIS-SSASSSLETPVRLYQNMFCSAENCSEET 78

Query: 81  YSGVISTTMGPKDHMVTSSFCCQSDGCN--SAFLSVPLTNLTENGLMCPACTASFRDKCM 138
           +    +  +  ++H    S CCQ   C+  S  L  PL N++ N   CPAC  S    C 
Sbjct: 79  HITAFTVHVSAEEHFHFVSQCCQGKECSNTSDALDPPLKNVSSNA-ECPACYESNGTSCR 137

Query: 139 GPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATES 176
           G    C  +E  CV L   ++  I      ++GC+  S
Sbjct: 138 GKPWKCY-EEEQCVFLVAELKNDIESKSLVLKGCSNVS 174


>gi|110735433 CD177 molecule [Homo sapiens]
          Length = 437

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 72  KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126
           KGC  ++D    V    MGP   +++ +F C Q D CN+   S+PL           L C
Sbjct: 74  KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133

Query: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178
           P C +   + C+   T   C     HC      ++ G       ++GC  + +C
Sbjct: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185



 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153
           C SD CNSA  S  L N              CP C         G P   C     HC  
Sbjct: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353

Query: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179
              H+  G    + +++GC  +   F
Sbjct: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379


>gi|53829381 plasminogen activator, urokinase receptor isoform 3
           precursor [Homo sapiens]
          Length = 290

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 116 LTNLTENGLMCPACTASFRDKCMGPMTH---CTGKENHCVSLSGHVQAGIFKPR---FAM 169
           L NL +NG  C +C  +    C    T    C G  N C+     V  G  +P+   + +
Sbjct: 161 LENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCL-----VATGTHEPKNQSYMV 215

Query: 170 RGCATESMC 178
           RGCAT SMC
Sbjct: 216 RGCATASMC 224



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)

Query: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
           C G M  C         LV   T + K   +  +GC  +  C    +       +H+  S
Sbjct: 192 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 241

Query: 99  SFCCQSDGCNSAFLSV 114
             CC   GCN   L V
Sbjct: 242 --CCTKSGCNHPDLDV 255


>gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]
          Length = 246

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 16/134 (11%)

Query: 54  VLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS-SFCCQSDGCNSAFL 112
           ++ +   T++G   V  +KGC  S   Y   IS  + P    + S S  C+S  CN+   
Sbjct: 65  LVFIETGTARG---VVGFKGC-SSSSSYPAQISYLVSPPGVSIASYSRVCRSYLCNNLTN 120

Query: 113 SVPLTNL--------TENGLMCPACTASFRDKCMGPMT---HCTGKENHCVSLSGHVQAG 161
             P   L        T     CP C       C+        C    + C S +   QAG
Sbjct: 121 LEPFVKLKASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQAG 180

Query: 162 IFKPRFAMRGCATE 175
                F + GCA E
Sbjct: 181 FLNTTFLLMGCARE 194


>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
          Length = 128

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)

Query: 9   TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
           T LL    L    G    L C +CT++ +  H  +  C +    C         K    V
Sbjct: 3   TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVV--CPASSRFC---------KTTNTV 51

Query: 69  HTYKGCIRSQDCYSGVIS--TTMGPKDHMVTSSFCCQSDGCN 108
              +G +  +DC        T  G      +S+ CCQ D CN
Sbjct: 52  EPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 21/103 (20%)

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
           T++GC ++   YS + +     + H     + C+ +GCN AF +          T+  E 
Sbjct: 506 TFEGCSKA---YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK 562

Query: 123 GLMC--PACTASFRDKCM---------GPMTHCTGKENHCVSL 154
             +C  P CT  + D            GP  H T K+ + V L
Sbjct: 563 PYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHL 605


>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 9   TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
           T LL  +L+  + L L   L C +C   G  C   M+ C +    C+      T      
Sbjct: 2   TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57

Query: 68  VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
           +   K C+    C+  V     G   H  T+S CCQ D CN   L+ P T
Sbjct: 58  MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101


>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 9   TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
           T LL  +L+  + L L   L C +C   G  C   M+ C +    C+      T      
Sbjct: 2   TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57

Query: 68  VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
           +   K C+    C+  V     G   H  T+S CCQ D CN   L+ P T
Sbjct: 58  MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101


>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 9   TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
           T LL  +L+  + L L   L C +C   G  C   M+ C +    C+      T      
Sbjct: 2   TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57

Query: 68  VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
           +   K C+    C+  V     G   H  T+S CCQ D CN   L+ P T
Sbjct: 58  MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101


>gi|93004088 GPI-anchored metastasis-associated protein homolog
           [Homo sapiens]
          Length = 346

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 50/203 (24%), Positives = 71/203 (34%), Gaps = 42/203 (20%)

Query: 14  FVLLCTLLGLGCPLHCEICTA-AGSRCH-GQMKT--CSSDKDTCVLLVGKATSKGKELVH 69
           ++LL  L G    L C  C   A   C   +MKT  C+   D C   VG       E +H
Sbjct: 18  WLLLLLLRGGAQALECYSCVQKADDGCSPNKMKTVKCAPGVDVCTEAVGAV-----ETIH 72

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFC----CQSDGCNSAFLSVPLTNLTE---- 121
             +  +  + C SG+        D     +F     C  D CN+        NLT     
Sbjct: 73  G-QFSLAVRGCGSGLPGKNDRGLDLHGLLAFIQLQQCAQDRCNAKL------NLTSRALD 125

Query: 122 ----------NGLMCPACTASFRDKCMG---PMTHCTGKENH----CVSLSGHVQAGIFK 164
                     NG+ C +C    R+ C G   P+  C    +H    C   +  + A    
Sbjct: 126 PAGNESAYPPNGVECYSCVGLSREACQGTSPPVVSCYNASDHVYKGCFDGNVTLTAANVT 185

Query: 165 PRFAMRGCATESMCFTKPGAEVP 187
               +RGC  +  C T+ G   P
Sbjct: 186 VSLPVRGCVQDEFC-TRDGVTGP 207


>gi|53829379 plasminogen activator, urokinase receptor isoform 2
           precursor [Homo sapiens]
          Length = 281

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 8/150 (5%)

Query: 15  VLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGC 74
           +LL T +     L C  C   G  C  +++ C+  +D C   + +   +G+EL    K C
Sbjct: 11  LLLHTCVPASWGLRCMQCKTNGD-C--RVEECALGQDLCRTTIVRLWEEGEELELVEKSC 67

Query: 75  IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFR 134
             S+   +  +S   G K   +T    C  D CN       +T      L C +C +S  
Sbjct: 68  THSEKT-NRTLSYRTGLKITSLT-EVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDM 125

Query: 135 --DKCMGPMTHCTGKENHCVSLSGH-VQAG 161
             ++       C   E  C+ +  H +Q G
Sbjct: 126 SCERGRHQSLQCRSPEEQCLDVVTHWIQEG 155


>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
          Length = 1580

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 21/97 (21%)

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
           T++GC ++   YS + +     + H     + C+ +GCN AF +          T+  E 
Sbjct: 549 TFEGCTKA---YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK 605

Query: 123 GLMC--PACTASFRDKCM---------GPMTHCTGKE 148
             +C  P CT  + D            GP  H T K+
Sbjct: 606 PYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQ 642


>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
           sapiens]
          Length = 97

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 9   TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
           T LL   +L   L     + C  CT  G   HG    C  D   CV    +  S  ++L 
Sbjct: 5   TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62

Query: 69  HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108
              K C I   D    + S  +GP      S  CCQ+  CN
Sbjct: 63  LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95


>gi|4759226 transforming growth factor, beta receptor I isoform 1
           precursor [Homo sapiens]
          Length = 503

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 33  TAAGSRCHGQMKTCSSDKDTCV---LLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTM 89
           TA    CH     C+ D  TCV   L     T    +++H    CI   D          
Sbjct: 32  TALQCFCH----LCTKDNFTCVTDGLCFVSVTETTDKVIHNSM-CIAEIDLIPRDRPFVC 86

Query: 90  GP--KDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGL 124
            P  K   VT+++CC  D CN   + +P T  +  GL
Sbjct: 87  APSSKTGSVTTTYCCNQDHCNK--IELPTTVKSSPGL 121


>gi|195963412 transforming growth factor, beta receptor I isoform 2
           precursor [Homo sapiens]
          Length = 426

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 12/92 (13%)

Query: 33  TAAGSRCHGQMKTCSSDKDTCV---LLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTM 89
           TA    CH     C+ D  TCV   L     T    +++H    CI   D          
Sbjct: 32  TALQCFCH----LCTKDNFTCVTDGLCFVSVTETTDKVIHNSM-CIAEIDLIPRDRPFVC 86

Query: 90  GP--KDHMVTSSFCCQSDGCNSAFLSVPLTNL 119
            P  K   VT+++CC  D CN   + +P T L
Sbjct: 87  APSSKTGSVTTTYCCNQDHCNK--IELPTTGL 116


>gi|24430141 fibrillin 1 precursor [Homo sapiens]
          Length = 2871

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 135  DKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMR----GCATESMCFTKPG 183
            D+C      CT K+  C +L G     I  P +  R    GC  E+ C TKPG
Sbjct: 2249 DECEEGKHDCTEKQMECKNLIGTYMC-ICGPGYQRRPDGEGCVDENECQTKPG 2300


>gi|66346695 fibrillin 2 precursor [Homo sapiens]
          Length = 2912

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 42/171 (24%), Positives = 58/171 (33%), Gaps = 40/171 (23%)

Query: 64   GKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNL---- 119
            G  L +T   C+ + +C  G  +         V  SF C    CN  F   P+ N     
Sbjct: 2201 GYNLDYTGVRCVDTDECSIG--NPCGNGTCTNVIGSFECN---CNEGFEPGPMMNCEDIN 2255

Query: 120  --TENGLMCP----------ACTASFR-------------DKCMGPMTHCTGKENHCVSL 154
               +N L+C            CT                 D+C   +  C  +   C +L
Sbjct: 2256 ECAQNPLLCAFRCMNTFGSYECTCPIGYALREDQKMCKDLDECAEGLHDCESRGMMCKNL 2315

Query: 155  SGHVQAGIFKPRFAMR----GCATESMCFTKPG-AEVPTGTNVLFLHHIEC 200
             G     I  P  A R    GC  E+ C TKPG  E     N++  +  EC
Sbjct: 2316 IGTFMC-ICPPGMARRPDGEGCVDENECRTKPGICENGRCVNIIGSYRCEC 2365


>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
          Length = 978

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 12/75 (16%)

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
           T++GC +S   YS + +     + H     + C+ +GC+ AF +          T+  E 
Sbjct: 176 TFEGCRKS---YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 232

Query: 123 GLMC--PACTASFRD 135
             +C  P CT  + D
Sbjct: 233 PYVCKLPGCTKRYTD 247


>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
          Length = 1106

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 12/75 (16%)

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
           T++GC +S   YS + +     + H     + C+ +GC+ AF +          T+  E 
Sbjct: 304 TFEGCRKS---YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 360

Query: 123 GLMC--PACTASFRD 135
             +C  P CT  + D
Sbjct: 361 PYVCKLPGCTKRYTD 375


>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
          Length = 753

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 70  TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLS 113
           T++GC R+   YS   +     K H    +F C  +GC  AFL+
Sbjct: 143 TFEGCPRT---YSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLT 183


>gi|21265052 ADAM metallopeptidase with thrombospondin type 1
          motif, 14 isoform 2 preproprotein [Homo sapiens]
          Length = 1223

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 17 LCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKG 73
          L  LL    PLHC +C AAGSR   ++       D  V +      +G+ L H   G
Sbjct: 4  LRALLSYLLPLHCALCAAAGSRT-PELHLSGKLSDYGVTVPCSTDFRGRFLSHVVSG 59


>gi|110611167 ADAM metallopeptidase with thrombospondin type 1
          motif, 14 isoform 1 preproprotein [Homo sapiens]
          Length = 1226

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 17 LCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKG 73
          L  LL    PLHC +C AAGSR   ++       D  V +      +G+ L H   G
Sbjct: 4  LRALLSYLLPLHCALCAAAGSRT-PELHLSGKLSDYGVTVPCSTDFRGRFLSHVVSG 59


>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
          Length = 401

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 98  SSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGH 157
           SS CCQ   C  A  +   ++  +     P C      K +G +  C+G  + C   S  
Sbjct: 247 SSSCCQQSSCQPACCT---SSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQSS- 302

Query: 158 VQAGIFKPRFAMRGCATESMCFTKPGAEVP 187
            Q        + +GC     C  KP + VP
Sbjct: 303 CQPACCTSSQSQQGCCVPVCC--KPVSCVP 330


>gi|239755070 PREDICTED: similar to proprotein convertase
           subtilisin/kexin type 5 [Homo sapiens]
          Length = 853

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 19/150 (12%)

Query: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
           CH   KTC+     C      +  KG  L+   + C+ S  C  G   +         T 
Sbjct: 176 CHSSCKTCNGSATLCT-----SCPKGAYLLA--QACVSS--CPQGTWPSVRSGSCENCTE 226

Query: 99  S--FCCQSDGCNSAFLSVPLTNLTENGLMCPACTAS------FRDKCMGPMTHCTGKENH 150
           +   C  +D C    +          G     C           ++C  P   C G   +
Sbjct: 227 ACAICSGADLCKKCQMQPGHPLFLHEGRCYSKCPEGSYAEDGICERCSSPCRTCEGNATN 286

Query: 151 CVSL-SGHV-QAGIFKPRFAMRGCATESMC 178
           C S   GHV   G+ +     R  A E +C
Sbjct: 287 CHSCEGGHVLHHGVCQENCPERHVAVEGVC 316


>gi|21071008 transcobalamin I precursor [Homo sapiens]
          Length = 433

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 75  IRSQDCYSGVISTTMGPKDHM----VTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACT 130
           I S+   +G+I  T    + M    V+S +  ++D      L+  LT +++     P   
Sbjct: 228 ILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAA 287

Query: 131 ASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKP 165
           A      MG       K++ CVS SG+      +P
Sbjct: 288 AQVLPALMGKTFLDINKDSSCVSASGNFNISADEP 322


>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
          Length = 131

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 122 NGLMCPACTASFRDK-CMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
           + LMC +C     +  C+ P T C+ ++N+CV++S     G         G +    C  
Sbjct: 19  SSLMCFSCLNQKSNLYCLKP-TICSDQDNYCVTVSASAGIG----NLVTFGHSLSKTC-- 71

Query: 181 KPGAEVPTGTNV 192
            P   +P G NV
Sbjct: 72  SPACPIPEGVNV 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.135    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,701,645
Number of Sequences: 37866
Number of extensions: 389609
Number of successful extensions: 1439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1383
Number of HSP's gapped (non-prelim): 86
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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