Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TGFBR1 Sequence: fasta or formatted (503aa) NCBI GI: 4759226
Description:

transforming growth factor, beta receptor I isoform 1 precursor

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [426aa] transforming growth factor, beta receptor I isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         44           9
 C cysteine            3.8         19           2
 D aspartate           5.0         25           2
 E glutamate           6.0         30           2
 F phenylalanine       2.8         14           1
 G glycine             6.0         30           2
 H histidine           3.2         16           2
 I isoleucine          6.8         34           1
 K lysine              5.0         25           2
 L leucine             9.3         47           4
 M methionine          3.0         15           1
 N asparagine          3.4         17           1
 P proline             4.4         22           1
 Q glutamine           2.6         13           2
 R arginine            6.2         31           2
 S serine              6.2         31           2
 T threonine           6.6         33           3
 V valine              7.2         36           2
 W tryptophan          1.6          8           1
 Y tyrosine            2.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming growth factor, beta receptor I isoform 1... 
ACVR1B                0.667   activin A receptor, type IB isoform a precursor [Homo...
ACVR1C                0.634   activin A receptor, type IC isoform 1 
TGFBR1                0.612   transforming growth factor, beta receptor I isoform...
ACVR1B                0.599   activin A receptor, type IB isoform b precursor [Hom...
ACVR1C                0.598   activin A receptor, type IC isoform 2 
ACVR1B                0.517   activin A receptor, type IB isoform c precursor [Hom...
ACVR1C                0.512   activin A receptor, type IC isoform 3 
BMPR1B                0.469   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.462   bone morphogenetic protein receptor, type IA precurs...
ACVR1                 0.429   activin A receptor, type I precursor 
ACVR1                 0.429   activin A receptor, type I precursor 
ACVRL1                0.399   activin A receptor type II-like 1 
ACVRL1                0.399   activin A receptor type II-like 1 
ACVR1C                0.370   activin A receptor, type IC isoform 4 
TGFBR2                0.209   transforming growth factor, beta receptor II isoform...
TGFBR2                0.209   transforming growth factor, beta receptor II isoform...
ACVR2A                0.207   activin A receptor, type IIA precursor 
ACVR2B                0.196   activin A receptor, type IIB precursor 
BMPR2                 0.171   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.142   anti-Mullerian hormone receptor, type II 
CSK                   0.070   c-src tyrosine kinase 
CSK                   0.070   c-src tyrosine kinase 
ZAK                   0.070   MLK-related kinase isoform 2 
ZAK                   0.070   MLK-related kinase isoform 1 
MAP3K7                0.060   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.060   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.060   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.060   mitogen-activated protein kinase kinase kinase 7 isof...
RAF1                  0.059   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press