Guide to the Human Genome
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Name: TGFBR1 Sequence: fasta or formatted (426aa) NCBI GI: 195963412
Description:

transforming growth factor, beta receptor I isoform 2 precursor

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [503aa] transforming growth factor, beta receptor I isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         41           9
 C cysteine            3.8         16           2
 D aspartate           4.9         21           2
 E glutamate           6.1         26           2
 F phenylalanine       2.8         12           1
 G glycine             5.6         24           2
 H histidine           3.1         13           1
 I isoleucine          6.6         28           1
 K lysine              5.4         23           2
 L leucine             9.4         40           4
 M methionine          2.8         12           1
 N asparagine          3.5         15           1
 P proline             3.8         16           1
 Q glutamine           3.1         13           2
 R arginine            6.6         28           2
 S serine              5.4         23           2
 T threonine           6.6         28           3
 V valine              6.6         28           2
 W tryptophan          1.9          8           1
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming growth factor, beta receptor I isoform... 
TGFBR1                0.724   transforming growth factor, beta receptor I isoform 1...
ACVR1C                0.667   activin A receptor, type IC isoform 3 
ACVR1B                0.656   activin A receptor, type IB isoform a precursor [Homo...
ACVR1C                0.606   activin A receptor, type IC isoform 2 
ACVR1C                0.606   activin A receptor, type IC isoform 1 
ACVR1B                0.575   activin A receptor, type IB isoform b precursor [Hom...
BMPR1B                0.504   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.486   bone morphogenetic protein receptor, type IA precurs...
ACVR1B                0.478   activin A receptor, type IB isoform c precursor [Hom...
ACVR1                 0.475   activin A receptor, type I precursor 
ACVR1                 0.475   activin A receptor, type I precursor 
ACVRL1                0.451   activin A receptor type II-like 1 
ACVRL1                0.451   activin A receptor type II-like 1 
ACVR1C                0.438   activin A receptor, type IC isoform 4 
TGFBR2                0.246   transforming growth factor, beta receptor II isoform...
TGFBR2                0.246   transforming growth factor, beta receptor II isoform...
ACVR2A                0.245   activin A receptor, type IIA precursor 
ACVR2B                0.232   activin A receptor, type IIB precursor 
BMPR2                 0.202   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.166   anti-Mullerian hormone receptor, type II 
CSK                   0.083   c-src tyrosine kinase 
CSK                   0.083   c-src tyrosine kinase 
ZAK                   0.083   MLK-related kinase isoform 2 
ZAK                   0.083   MLK-related kinase isoform 1 
MAP3K7                0.071   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.071   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.071   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.071   mitogen-activated protein kinase kinase kinase 7 isof...
RAF1                  0.070   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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