Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757152
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757152 PREDICTED: hypothetical protein [Homo sapiens] 502 e-142
gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo ... 502 e-142
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 42 5e-04
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 42 5e-04
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 40 0.002
gi|22035569 GC-rich sequence DNA-binding factor candidate isofor... 35 0.043
gi|22035565 GC-rich sequence DNA-binding factor candidate isofor... 35 0.043
gi|33667063 transmembrane protease, serine 9 [Homo sapiens] 35 0.073
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 34 0.095
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 34 0.095
gi|113419362 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|113418886 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|113419893 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|30089980 chordin [Homo sapiens] 33 0.16
gi|239756530 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|7706469 Kruppel-like factor [Homo sapiens] 33 0.16
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 33 0.21
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 33 0.21
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 33 0.21
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.28
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 33 0.28
gi|239757232 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|239751740 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens] 33 0.28
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 33 0.28
gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo ... 33 0.28
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 33 0.28
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 32 0.36
>gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 502 bits (1292), Expect = e-142
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA 60
MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA
Sbjct: 1 MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA 60
Query: 61 HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT 120
HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT
Sbjct: 61 HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT 120
Query: 121 PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA 180
PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA
Sbjct: 121 PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA 180
Query: 181 GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP 235
GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP
Sbjct: 181 GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP 235
>gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo
sapiens]
Length = 235
Score = 502 bits (1292), Expect = e-142
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA 60
MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA
Sbjct: 1 MQLSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPA 60
Query: 61 HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT 120
HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT
Sbjct: 61 HCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVALSPALCPALLTGAVERT 120
Query: 121 PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA 180
PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA
Sbjct: 121 PVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWA 180
Query: 181 GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP 235
GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP
Sbjct: 181 GSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP 235
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 42.0 bits (97), Expect = 5e-04
Identities = 58/206 (28%), Positives = 76/206 (36%), Gaps = 25/206 (12%)
Query: 3 LSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPAHC 62
L P+AGS+ + R G+AGP G GGA + RG C
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAG-------RGGAGGGGRCCTRGRGRFPC 113
Query: 63 ASRHG------GCCIPAVTFVAARAAVGIWP------FQPREGPSASTQISVALSPALCP 110
A G GC P+ ++ A WP +PR P+ I+ PAL
Sbjct: 114 AGSGGRGARSRGCHSPSCCR-SSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPA 172
Query: 111 ALLTGAVERTPVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGL--GPSPPRAAR 168
AL GA + K + +C G GR + P PP R GL G P AR
Sbjct: 173 ALHIGARATAGLAAKRAQPQLCSAGTAARGRR-TRASPPTPPRPRPPGLRSGDVPRGGAR 231
Query: 169 PSVPAAAGCGWAGSRDSGRPVPSLPV 194
P G AG R + +P P+
Sbjct: 232 VERP--TGRRGAGGRGGAQRIPPRPL 255
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 42.0 bits (97), Expect = 5e-04
Identities = 58/206 (28%), Positives = 76/206 (36%), Gaps = 25/206 (12%)
Query: 3 LSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPAHC 62
L P+AGS+ + R G+AGP G GGA + RG C
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAG-------RGGAGGGGRCCTRGRGRFPC 113
Query: 63 ASRHG------GCCIPAVTFVAARAAVGIWP------FQPREGPSASTQISVALSPALCP 110
A G GC P+ ++ A WP +PR P+ I+ PAL
Sbjct: 114 AGSGGRGARSRGCHSPSCCR-SSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPA 172
Query: 111 ALLTGAVERTPVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGL--GPSPPRAAR 168
AL GA + K + +C G GR + P PP R GL G P AR
Sbjct: 173 ALHIGARATAGLAAKRAQPQLCSAGTAARGRR-TRASPPTPPRPRPPGLRSGDVPRGGAR 231
Query: 169 PSVPAAAGCGWAGSRDSGRPVPSLPV 194
P G AG R + +P P+
Sbjct: 232 VERP--TGRRGAGGRGGAQRIPPRPL 255
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 41.2 bits (95), Expect = 8e-04
Identities = 58/206 (28%), Positives = 76/206 (36%), Gaps = 25/206 (12%)
Query: 3 LSNNPSAGSSSCKLREAVARICQSGSAGPDTQGFRCHLDVGGGAEHSIQSEALARGPAHC 62
L P+AGS+ + R G+AGP G GGA + RG C
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAG-------RGGAGGGGRCCTRGRGRFPC 113
Query: 63 A------SRHGGCCIPAVTFVAARAAVGIWP------FQPREGPSASTQISVALSPALCP 110
A +R GC P+ ++ A WP PR P+ I+ PAL
Sbjct: 114 AGSGGRGARSRGCHSPSCC-RSSSCAWHRWPQLRGREADPRASPALLICIAPRPRPALPA 172
Query: 111 ALLTGAVERTPVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGL--GPSPPRAAR 168
AL GA + K + +C G GR + P PP R GL G P AR
Sbjct: 173 ALHIGARATAGLAAKRAQPQLCSAGTAARGRR-TRASPPTPPRPRPPGLRSGDVPRGGAR 231
Query: 169 PSVPAAAGCGWAGSRDSGRPVPSLPV 194
P G AG R + +P P+
Sbjct: 232 VERP--TGRRGAGGRGGAQRIPPWPL 255
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 106 PALCPALLTGAVERTPVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPR 165
PAL P TGA+ L+ G A PGP P PP
Sbjct: 194 PALLPPCATGALGSA---LRGPSLPALGAGAAAGSAAAAAAAAPGPA----GAASPHPPA 246
Query: 166 AARPSVPAAAGCGW--AGSRDSGRPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRV 223
P AG G AG+ +G + SLPV LG A SSAP SL G +
Sbjct: 247 VGGAPGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLGSVASRLSSAPLTMAGSLAGNLQEL 306
Query: 224 MRGFRLGCGFRP 235
+ F P
Sbjct: 307 SARYLSSSAFEP 318
>gi|22035569 GC-rich sequence DNA-binding factor candidate isoform 2
[Homo sapiens]
Length = 815
Score = 35.4 bits (80), Expect = 0.043
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 142 GCLELAGPG-----PPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSRDSG 186
G E AGPG P L G GPSPP A P + A AG G+ G + G
Sbjct: 37 GTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPG 86
>gi|22035565 GC-rich sequence DNA-binding factor candidate isoform 1
[Homo sapiens]
Length = 917
Score = 35.4 bits (80), Expect = 0.043
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 142 GCLELAGPG-----PPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSRDSG 186
G E AGPG P L G GPSPP A P + A AG G+ G + G
Sbjct: 37 GTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPG 86
>gi|33667063 transmembrane protease, serine 9 [Homo sapiens]
Length = 1059
Score = 34.7 bits (78), Expect = 0.073
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 24/119 (20%)
Query: 135 GVVRWGRGCLELAGPG--PPCGRLRG-LGPSPPRAARP------SVPAAAGCGWAGSRDS 185
G+V WG GC E PG RLR + + +A+ P PAA W S +S
Sbjct: 404 GIVSWGIGCAEARRPGVYARVTRLRDWILEATTKASMPLAPTMAPAPAAPSTAWPTSPES 463
Query: 186 G---------RPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRLGCGFRP 235
+ + ++P+D P+ C + PA +P+ RV+ GF G P
Sbjct: 464 PVVSTPTKSMQALSTVPLDWVTVPKLQECGARPAMEKPT------RVVGGFGAASGEVP 516
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 34.3 bits (77), Expect = 0.095
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 161 PSPPRAARPSVPAAAGCGWAGSRDSGRPVPSLPVDCGLGPEA 202
P P R R VP A+G W G + P P+LP P A
Sbjct: 746 PEPCRRGRHRVPLASGTAWLGLPPASTPAPALPSSPAWSPPA 787
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 34.3 bits (77), Expect = 0.095
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 161 PSPPRAARPSVPAAAGCGWAGSRDSGRPVPSLPVDCGLGPEA 202
P P R R VP A+G W G + P P+LP P A
Sbjct: 745 PEPCRRGRHRVPLASGTAWLGLPPASTPAPALPSSPAWSPPA 786
>gi|113419362 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 33.9 bits (76), Expect = 0.12
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 78 AARAAVG----IWPFQPREGPSASTQISVALSPALCPALLTGAVERTPVHLKAGKWCVCW 133
AA +A+G + P +P P + V SP C AL G + L+ W +C
Sbjct: 46 AAGSAIGRGAHLSPSRPPAAPPPRRE--VLSSPGCCAALAGGDTNGEWI-LRGSTWGLC- 101
Query: 134 PGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVP---AAAGCGWAGSRDSGRPVP 190
P G G LA PGP P AA+ +P +G GW+ + R +
Sbjct: 102 PPSPGCGAGRRALATPGP---------LESPAAAQDPLPRHVGPSGLGWS-LEPAARVLS 151
Query: 191 SLPVDCGLGP 200
L V G+GP
Sbjct: 152 GLLVGAGVGP 161
>gi|113418886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 33.9 bits (76), Expect = 0.12
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 78 AARAAVG----IWPFQPREGPSASTQISVALSPALCPALLTGAVERTPVHLKAGKWCVCW 133
AA +A+G + P +P P + V SP C AL G + L+ W +C
Sbjct: 46 AAGSAIGRGAHLSPSRPPAAPPPRRE--VLSSPGCCAALAGGDTNGEWI-LRGSTWGLC- 101
Query: 134 PGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVP---AAAGCGWAGSRDSGRPVP 190
P G G LA PGP P AA+ +P +G GW+ + R +
Sbjct: 102 PPSPGCGAGRRALATPGP---------LESPAAAQDPLPRHVGPSGLGWS-LEPAARVLS 151
Query: 191 SLPVDCGLGP 200
L V G+GP
Sbjct: 152 GLLVGAGVGP 161
>gi|113419893 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 33.9 bits (76), Expect = 0.12
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 78 AARAAVG----IWPFQPREGPSASTQISVALSPALCPALLTGAVERTPVHLKAGKWCVCW 133
AA +A+G + P +P P + V SP C AL G + L+ W +C
Sbjct: 46 AAGSAIGRGAHLSPSRPPAAPPPRRE--VLSSPGCCAALAGGDTNGEWI-LRGSTWGLC- 101
Query: 134 PGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVP---AAAGCGWAGSRDSGRPVP 190
P G G LA PGP P AA+ +P +G GW+ + R +
Sbjct: 102 PPSPGCGAGRRALATPGP---------LESPAAAQDPLPRHVGPSGLGWS-LEPAARVLS 151
Query: 191 SLPVDCGLGP 200
L V G+GP
Sbjct: 152 GLLVGAGVGP 161
>gi|30089980 chordin [Homo sapiens]
Length = 955
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 150 GPPCGRLRGLGPSPPRAARPSVPA-------AAGCGWAGSRDSGRPVPSLPVDCGLGPEA 202
GP R G ++ PSVP CG AG R SLP+ CG G E+
Sbjct: 868 GPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCG-AGVPHCERDDCSLPLSCGSGKES 926
Query: 203 LLCSSAPAARRPS 215
CS A RRP+
Sbjct: 927 RCCSRCTAHRRPA 939
>gi|239756530 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 33.5 bits (75), Expect = 0.16
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Query: 134 PGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSRDSGRPVPSLP 193
P + R GRG A PG P GR P R P + W+G +S R S+P
Sbjct: 55 PSIRRAGRGSHAEAKPGAPTGR----SPVCQRCRWPPLQTPGAHHWSGRAES-RGEASVP 109
Query: 194 VDCGLGPEALLCSSAPAARRPSLCGGH----GRVMRGFRLGC 231
LG P PS C + G V+ G +GC
Sbjct: 110 DIPALG--------VPGQATPSPCPANADLQGDVVEGVHVGC 143
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 99 QISVALSPALCPALLTGA----VERTPVHLKAGKWCVCWPGVVRWGRGCLELAGPGPPCG 154
++ L PAL L V+ P G C PG+ R RG PGP
Sbjct: 99 ELDAPLGPALHGRFLLAPPGRLVKAEPPEADGGGGYGCAPGLTRGPRGLKREGAPGPAAS 158
Query: 155 RLRGLGPSPP 164
+RG G PP
Sbjct: 159 CMRGPGGRPP 168
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 148 GPGPPCGRLRGL-GPSPPRAARPSVP--AAAGCGWAGSRDSGRP-VPSLPVDCGLGPEAL 203
GP P C R P+ P+AA + P AA+G GSR G V + P G P L
Sbjct: 125 GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPL 184
Query: 204 LCSSAPAARRPS 215
C AA R S
Sbjct: 185 TCRRCRAAPRRS 196
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 148 GPGPPCGRLRGL-GPSPPRAARPSVP--AAAGCGWAGSRDSGRP-VPSLPVDCGLGPEAL 203
GP P C R P+ P+AA + P AA+G GSR G V + P G P L
Sbjct: 125 GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPL 184
Query: 204 LCSSAPAARRPS 215
C AA R S
Sbjct: 185 TCRRCRAAPRRS 196
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 148 GPGPPCGRLRGL-GPSPPRAARPSVP--AAAGCGWAGSRDSGRP-VPSLPVDCGLGPEAL 203
GP P C R P+ P+AA + P AA+G GSR G V + P G P L
Sbjct: 125 GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPL 184
Query: 204 LCSSAPAARRPS 215
C AA R S
Sbjct: 185 TCRRCRAAPRRS 196
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 148 GPGPPCGRLRGL-GPSPPRAARPSVP--AAAGCGWAGSRDSGRP-VPSLPVDCGLGPEAL 203
GP P C R P+ P+AA + P AA+G GSR G V + P G P L
Sbjct: 125 GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPL 184
Query: 204 LCSSAPAARRPS 215
C AA R S
Sbjct: 185 TCRRCRAAPRRS 196
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 32.7 bits (73), Expect = 0.28
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 148 GPGPPCGRLRGLGPSPPRAARPS-VPAAA-GCGWAGSRDSGRPVPSLPVDCGLGP 200
GP PP G GP PP PS VPAAA G G G P P+ P+ GP
Sbjct: 169 GPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAG-------GGPPPAPPLPAAQGP 216
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 32.7 bits (73), Expect = 0.28
Identities = 31/129 (24%), Positives = 46/129 (35%), Gaps = 11/129 (8%)
Query: 78 AARAAVGIWPFQPREGPSASTQ-----ISVALSPALCPALLTGAVERTPVHLKAGKWCVC 132
A R G WP P GP S + ++ P + PA G+ + + +A
Sbjct: 119 AVRPRPGPWPAAPSRGPVRSCRGPRPGRALGSLPLVLPAGSCGSCQEDSLGNQAR----- 173
Query: 133 WPGVVRWGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSRDSGRPVPSL 192
P + G + L P P R R P P+ + + P A +R +L
Sbjct: 174 -PSALEIGASGVGLGSPAPSNRRNRYAPPESPKGSPSAKPPRACSDTFSARQPASTPKAL 232
Query: 193 PVDCGLGPE 201
P C PE
Sbjct: 233 PGGCPGDPE 241
>gi|239757232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 32.7 bits (73), Expect = 0.28
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 22/103 (21%)
Query: 139 WGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG----------SRDSG-- 186
W G +L G GP L GLGP PP P A + W G SG
Sbjct: 331 WAPGWRQL-GRGPATPMLHGLGPVPP----PLWAAVSASRWGGGGPQPLPQVSKEGSGLA 385
Query: 187 RPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRL 229
RP PS V GLG + P A+ L R RG +L
Sbjct: 386 RPDPSCCVRAGLG-----AAKTPGAQGERLGPRGTRRARGLQL 423
Score = 29.3 bits (64), Expect = 3.1
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 142 GCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG-SRDSGRPVPSLPVDCGLGP 200
G L ++GP P LR +PP + G G G +R+ GR + PV P
Sbjct: 218 GVLRVSGPATPELALRSRAVTPP--------SLGGGGDRGENREEGRDLCLGPVAKKPDP 269
Query: 201 EALLCSSAPAARRPSL 216
AL SS AA P L
Sbjct: 270 RALAISSRGAAASPCL 285
>gi|239751740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 32.7 bits (73), Expect = 0.28
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 22/103 (21%)
Query: 139 WGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG----------SRDSG-- 186
W G +L G GP L GLGP PP P A + W G SG
Sbjct: 331 WAPGWRQL-GRGPATPMLHGLGPVPP----PLWAAVSASRWGGGGPQPLPQVSKEGSGLA 385
Query: 187 RPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRL 229
RP PS V GLG + P A+ L R RG +L
Sbjct: 386 RPDPSCCVRAGLG-----AAKTPGAQGERLGPRGTRRARGLQL 423
Score = 29.3 bits (64), Expect = 3.1
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 142 GCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG-SRDSGRPVPSLPVDCGLGP 200
G L ++GP P LR +PP + G G G +R+ GR + PV P
Sbjct: 218 GVLRVSGPATPELALRSRAVTPP--------SLGGGGDRGENREEGRDLCLGPVAKKPDP 269
Query: 201 EALLCSSAPAARRPSL 216
AL SS AA P L
Sbjct: 270 RALAISSRGAAASPCL 285
>gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens]
Length = 196
Score = 32.7 bits (73), Expect = 0.28
Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 34/165 (20%)
Query: 95 SASTQISVALSPALCPALLTGA---VERTPVHLKAGKWCVCW---PGVVRWGRGCLELAG 148
S Q + P L LLTG+ + P + + + W PG + RG E G
Sbjct: 20 SQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQ-SLSWLSPPG--KRARGWRESRG 76
Query: 149 PGP----PCGRLRGLGPSPPRAARPSVPAAAGCG-------------WAGSRD-SGRPVP 190
GP GR + PSP RP+ P A G W G++ + RP
Sbjct: 77 HGPHPTVSAGRPQHSSPSPRHTTRPAAPRQALPGVHPLRRQVGEETCWGGAQAWAARPFL 136
Query: 191 SLPVDCGLGPEALLCSSAP-----AARRPSLCGGHGRVMRGFRLG 230
SLP C P L + P A R+ + C V+ G+ G
Sbjct: 137 SLP--CQAVPAPTLTPTTPPDPPRAGRKCNECRAVSLVLLGWSQG 179
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 32.7 bits (73), Expect = 0.28
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 142 GCLELAGPGPPCGRLRGLG----PSPPRAARPSVPAAAGCGWAGSRDSGRPVPSLPVDCG 197
G E+ G PC + PSP A RP P AA A S P P P C
Sbjct: 313 GTTEVMSVGSPCPAAEPVSQAGPPSPGHAGRPRGPEAAR-PCARGPPSQEPGPPRPWPCA 371
Query: 198 LGPEALLCSSAPAAR 212
L P L ++ P+ R
Sbjct: 372 LRPRPRLRAALPSRR 386
>gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo
sapiens]
Length = 461
Score = 32.7 bits (73), Expect = 0.28
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 22/103 (21%)
Query: 139 WGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG----------SRDSG-- 186
W G +L G GP L GLGP PP P A + W G SG
Sbjct: 331 WAPGWRQL-GRGPATPMLHGLGPVPP----PLWAAVSASRWGGGGPQPLPQVSKEGSGLA 385
Query: 187 RPVPSLPVDCGLGPEALLCSSAPAARRPSLCGGHGRVMRGFRL 229
RP PS V GLG + P A+ L R RG +L
Sbjct: 386 RPDPSCCVRAGLG-----AAKTPGAQGERLGPRGTRRARGLQL 423
Score = 29.3 bits (64), Expect = 3.1
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 142 GCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAG-SRDSGRPVPSLPVDCGLGP 200
G L ++GP P LR +PP + G G G +R+ GR + PV P
Sbjct: 218 GVLRVSGPATPELALRSRAVTPP--------SLGGGGDRGENREEGRDLCLGPVAKKPDP 269
Query: 201 EALLCSSAPAARRPSL 216
AL SS AA P L
Sbjct: 270 RALAISSRGAAASPCL 285
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 32.7 bits (73), Expect = 0.28
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 142 GCLELAGPGPPCGRLRGLG----PSPPRAARPSVPAAAGCGWAGSRDSGRPVPSLPVDCG 197
G E+ G PC + PSP A RP P AA A S P P P C
Sbjct: 313 GTTEVMSVGSPCPAAEPVSQAGPPSPGHAGRPRGPEAAR-PCARGPPSQEPGPPRPWPCA 371
Query: 198 LGPEALLCSSAPAAR 212
L P L ++ P+ R
Sbjct: 372 LRPRPRLRAALPSRR 386
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 32.3 bits (72), Expect = 0.36
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 148 GPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSRDSGRP-VPSLP----VDCGLGPEA 202
GP PP G PP A + AAA + G P P++P V+C +G A
Sbjct: 38 GPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVNCAVG-SA 96
Query: 203 LLCSSAPAARR 213
+L +AP RR
Sbjct: 97 MLTRAAPGPRR 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,416,787
Number of Sequences: 37866
Number of extensions: 748928
Number of successful extensions: 3523
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 3281
Number of HSP's gapped (non-prelim): 429
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.