Search of human proteins with 11967981

Search of human proteins with 11967981

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
         (212 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]          422   e-118
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...   176   1e-44
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...   176   1e-44
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]          172   2e-43
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]           168   4e-42
gi|116812567 RAB25 [Homo sapiens]                                     147   5e-36
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]           144   4e-35
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]          143   1e-34
gi|19923483 GTPase Rab14 [Homo sapiens]                               142   3e-34
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           141   4e-34
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         141   4e-34
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]          137   7e-33
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    136   1e-32
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          136   1e-32
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          135   2e-32
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   134   7e-32
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           134   7e-32
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa...   132   2e-31
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          132   2e-31
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   132   3e-31
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa...   131   4e-31
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           131   4e-31
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          131   4e-31
gi|10190714 RAS-related protein RAB-22A [Homo sapiens]                131   4e-31
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   131   5e-31
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            131   5e-31
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            131   5e-31
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   131   5e-31
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        130   6e-31
gi|16933567 mel transforming oncogene [Homo sapiens]                  129   1e-30

>gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  422 bits (1085), Expect = e-118
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILPTVGCAFFTKVV 60
           MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILPTVGCAFFTKVV
Sbjct: 1   MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILPTVGCAFFTKVV 60

Query: 61  DVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEEL 120
           DVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEEL
Sbjct: 61  DVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEEL 120

Query: 121 HPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
           HPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL
Sbjct: 121 HPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180

Query: 181 LQRSDEEGQALRGDAAVALNKGPARQAKCCAH 212
           LQRSDEEGQALRGDAAVALNKGPARQAKCCAH
Sbjct: 181 LQRSDEEGQALRGDAAVALNKGPARQAKCCAH 212


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score =  176 bits (447), Expect = 1e-44
 Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 4/208 (1%)

Query: 8   PQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATS 66
           P   AA ++   FKLVLLG  +VGKSSL LR+VK  F      T+G AF T+ V +  T+
Sbjct: 10  PNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69

Query: 67  LKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVL 126
           +K EIWDTAGQE+YHS+  +Y+RGA AA++VYDIT  D+F +A+ W+K+L+ +  P  ++
Sbjct: 70  VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP-NIV 128

Query: 127 VMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDE 186
           + L GNK DL+ +R V FQE + +AD   LLFMETSAK    V+E+F  +A++L +   +
Sbjct: 129 IALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ 188

Query: 187 EGQALRG-DAAVALNK-GPARQAKCCAH 212
                 G +  V L +  PA +++CC++
Sbjct: 189 NATGAPGRNRGVDLQENNPASRSQCCSN 216


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score =  176 bits (447), Expect = 1e-44
 Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 4/208 (1%)

Query: 8   PQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATS 66
           P   AA ++   FKLVLLG  +VGKSSL LR+VK  F      T+G AF T+ V +  T+
Sbjct: 10  PNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69

Query: 67  LKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVL 126
           +K EIWDTAGQE+YHS+  +Y+RGA AA++VYDIT  D+F +A+ W+K+L+ +  P  ++
Sbjct: 70  VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP-NIV 128

Query: 127 VMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDE 186
           + L GNK DL+ +R V FQE + +AD   LLFMETSAK    V+E+F  +A++L +   +
Sbjct: 129 IALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ 188

Query: 187 EGQALRG-DAAVALNK-GPARQAKCCAH 212
                 G +  V L +  PA +++CC++
Sbjct: 189 NATGAPGRNRGVDLQENNPASRSQCCSN 216


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  172 bits (435), Expect = 2e-43
 Identities = 87/196 (44%), Positives = 128/196 (65%), Gaps = 4/196 (2%)

Query: 20  FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQE 78
           FKLVLLG  +VGKSSL LR+VK  F      T+G AF T+ V +  T++K EIWDTAGQE
Sbjct: 21  FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80

Query: 79  KYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQ 138
           +YHS+  +Y+RGA AA++VYDIT ++SF +A+ W+K+L+ +  P  +++ L GNK DL+ 
Sbjct: 81  RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP-NIVIALSGNKADLAN 139

Query: 139 EREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEE--GQALRGDAA 196
           +R V FQE + +AD   LLFMETSAK +  V+E+F  +A++L +   +     + RG   
Sbjct: 140 KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGV 199

Query: 197 VALNKGPARQAKCCAH 212
                    + +CC++
Sbjct: 200 DLTEPTQPTRNQCCSN 215


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  168 bits (425), Expect = 4e-42
 Identities = 87/211 (41%), Positives = 135/211 (63%), Gaps = 6/211 (2%)

Query: 7   TPQPRAAPSQPRV--FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVG 63
           T +P   P   ++  FKLVLLG  +VGKSSL LR+VK  F      T+G AF T+ V + 
Sbjct: 6   TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLD 65

Query: 64  ATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPG 123
            T++K EIWDTAGQE+YHS+  +Y+RGA AA++VYDIT +++F +A+ W+K+L+ +  P 
Sbjct: 66  DTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP- 124

Query: 124 EVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQR 183
            +++ L GNK DL+ +R V ++E + +AD   LLFMETSAK    V+++F  +A++L + 
Sbjct: 125 SIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184

Query: 184 SDEE--GQALRGDAAVALNKGPARQAKCCAH 212
             +   G A R        +    +++CC++
Sbjct: 185 EPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  147 bits (372), Expect = 5e-36
 Identities = 79/200 (39%), Positives = 122/200 (61%), Gaps = 9/200 (4%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           VFK+VL+G   VGK++L  R+ +N+F      T+G  F T+ V +G  ++K +IWDTAG 
Sbjct: 12  VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 71

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E+Y ++   Y+RGA  ALLV+D+T+  ++   ++WLK+L +      ++VMLVGNK+DLS
Sbjct: 72  ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAE-ATIVVMLVGNKSDLS 130

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQ-ALR---- 192
           Q REV  +E + FA++  LLF+ETSA  +  V   F TV +E+  +  ++ Q ++R    
Sbjct: 131 QAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAI 190

Query: 193 --GDAAVALNKGPARQAKCC 210
             G A      GP  +  CC
Sbjct: 191 TLGSAQAGQEPGPGEKRACC 210


>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
          Length = 225

 Score =  144 bits (364), Expect = 4e-35
 Identities = 74/180 (41%), Positives = 116/180 (64%), Gaps = 2/180 (1%)

Query: 12  AAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFFTKVVDVGATSLKLE 70
           AA  +   FK+VLLG G VGK+SL LRY +N F    + T+  +F TK +++G   + L 
Sbjct: 12  AAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLA 71

Query: 71  IWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLV 130
           IWDTAGQE++H++  +Y+R +N A+LVYDIT +DSF K + W+K+L + L   E+ + +V
Sbjct: 72  IWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKML-GNEICLCIV 130

Query: 131 GNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQA 190
           GNK DL +ER V+ QE + +A+S       TSAK N  + E+F  + + +++ +  + +A
Sbjct: 131 GNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERA 190


>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
          Length = 195

 Score =  143 bits (360), Expect = 1e-34
 Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 8/196 (4%)

Query: 18  RVFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAG 76
           R  K+ LLG   VGKSS+  R+V++ F  +I PT+G +F TK V  G    K  IWDTAG
Sbjct: 5   RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAG 64

Query: 77  QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
           QE++HS+  +Y+RG+ AA++VYDIT++DSF   ++W+K+L+E   P  +++ + GNK DL
Sbjct: 65  QERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEH-GPENIVMAIAGNKCDL 123

Query: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAA 196
           S  REV  ++ KE+A+S   + +ETSAK    + E+F  +++++      E     G+  
Sbjct: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179

Query: 197 VALNKGPARQA--KCC 210
               + P  QA  +CC
Sbjct: 180 TIKVEKPTMQASRRCC 195


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  142 bits (357), Expect = 3e-34
 Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 2/189 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK +++G   VGKS L  ++ +  F +  P T+G  F T++++V    +KL+IWDTAGQ
Sbjct: 11  IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 70

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ +V   Y+RGA  AL+VYDITR+ ++     WL D     +P  V++ L+GNK DL 
Sbjct: 71  ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII-LIGNKADLE 129

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAV 197
            +R+VT++E K+FA+   LLF+E SAK    V + F   A+++ Q   +    L    + 
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189

Query: 198 ALNKGPARQ 206
             +K  A Q
Sbjct: 190 VQHKPSAPQ 198


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  141 bits (356), Expect = 4e-34
 Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 3/195 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK +++G   VGKS L L++    F+ +   T+G  F  +++ +    +KL+IWDTAGQ
Sbjct: 6   LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E + S+   Y+RGA  ALLVYDITR+D+F     WL+D  +  +   +++ML+GNK+DL 
Sbjct: 66  ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSN-SNMVIMLIGNKSDLE 124

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAV 197
             REV  +EG+ FA    L+FMETSAK    V E F   A+E+ ++  +EG     + A 
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI-QEGVFDINNEAN 183

Query: 198 ALNKGPARQAKCCAH 212
            +  GP   A    H
Sbjct: 184 GIKIGPQHAATNATH 198


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  141 bits (356), Expect = 4e-34
 Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 2/168 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK +++GS   GKS L  ++++N FK     T+G  F ++VV+VG  ++KL+IWDTAGQ
Sbjct: 8   LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ SV   Y+RGA  ALLVYDIT ++++     WL D      P  ++V+L GNK DL 
Sbjct: 68  ERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NIVVILCGNKKDLD 126

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSD 185
            EREVTF E   FA   +L+F+ETSA     V E F   A+ +L + D
Sbjct: 127 PEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174


>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
          Length = 208

 Score =  137 bits (345), Expect = 7e-33
 Identities = 73/196 (37%), Positives = 121/196 (61%), Gaps = 5/196 (2%)

Query: 18  RVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAG 76
           R FKLV LG  SVGK+SL  R++ + F +    T+G  F +K + +   +++L++WDTAG
Sbjct: 12  RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 71

Query: 77  QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
           QE++ S+   Y R +  A++VYDIT  +SF +  +W+ D+  E    +V++MLVGNKTDL
Sbjct: 72  QERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTE-RGSDVIIMLVGNKTDL 130

Query: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAA 196
           + +R++T +EG++ A    ++F+ETSAK  + V ++F  VA  L    + + ++  G   
Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190

Query: 197 VALNK---GPARQAKC 209
           + L+K    PA +  C
Sbjct: 191 IKLDKPQEPPASEGGC 206


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  136 bits (342), Expect = 1e-32
 Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 2/166 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK +++G   VGKS L L++    F+ +   T+G  F  ++V++    +KL+IWDTAGQ
Sbjct: 6   LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQ 65

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E + S+   Y+RGA  ALLVYDITR+++F     WL+D  +      +++ML+GNK+DL 
Sbjct: 66  ESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSSNMVIMLIGNKSDLE 124

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQR 183
             R+V  +EG+ FA    L+FMETSAK    V E F   A+E+ ++
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  136 bits (342), Expect = 1e-32
 Identities = 74/167 (44%), Positives = 104/167 (62%), Gaps = 3/167 (1%)

Query: 20  FKLVLLGSGSVGKSSLALRYVKNDFKS--ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           FK++L+G   VGK+ L +R+    F +   + TVG  F  KV+DV    +KL++WDTAGQ
Sbjct: 64  FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ SV H Y+R A+A LL+YD+T K SF   Q WL ++ E     +V +ML+GNK D +
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-HDVALMLLGNKVDSA 182

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRS 184
            ER V  ++G++ A    L FMETSAK    V   F  +A+EL QRS
Sbjct: 183 HERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRS 229


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  135 bits (341), Expect = 2e-32
 Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 10/196 (5%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK +++G+   GKS L  ++++  FK     T+G  F +K+++VG   +KL+IWDTAGQ
Sbjct: 13  LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 72

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ SV   Y+RGA  ALLVYDIT ++++     WL D    L    ++++L GNK DL 
Sbjct: 73  ERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD-ARMLASQNIVIILCGNKKDLD 131

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQR-------SDEEGQA 190
            +REVTF E   FA   +L+F+ETSA     V E F   A+++L +        +  G  
Sbjct: 132 ADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSG 191

Query: 191 LR-GDAAVALNKGPAR 205
           ++ GDAA+   + P R
Sbjct: 192 IQYGDAALRQLRSPRR 207


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  134 bits (336), Expect = 7e-32
 Identities = 73/201 (36%), Positives = 121/201 (60%), Gaps = 5/201 (2%)

Query: 14  PSQPRVFKLVLLGSGSVGKSSLALRYVKNDF-KSILPTVGCAFFTKVVDVGATSLKLEIW 72
           P    +FKL+L+G   VGKS L LR+  + + +S + T+G  F  + +++   ++KL+IW
Sbjct: 6   PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65

Query: 73  DTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGN 132
           DTAGQE++ ++   Y+RGA+  ++VYD+T ++SF   +QWL++++       V  +LVGN
Sbjct: 66  DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASE-NVNKLLVGN 124

Query: 133 KTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALR 192
           K DL+ ++ V +   KEFADS  + F+ETSAK    V + F T+A E+ +R      A  
Sbjct: 125 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 184

Query: 193 GDAA-VALNKGPARQA--KCC 210
            + + V +   P +Q+   CC
Sbjct: 185 AEKSNVKIQSTPVKQSGGGCC 205


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  134 bits (336), Expect = 7e-32
 Identities = 68/196 (34%), Positives = 115/196 (58%), Gaps = 6/196 (3%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FKL+++G   VGKSSL LR+  N F  S + T+G  F  + V++    +KL+IWDTAGQ
Sbjct: 8   LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ ++   Y+RG +  ++VYD+T  +SF+  ++WL ++ +     +V  +LVGNK D  
Sbjct: 68  ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRILVGNKNDDP 125

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDE---EGQALRGD 194
           + + V  ++  +FA    +   ETSAK N  V E+FN + + +L+   +   + Q  + +
Sbjct: 126 ERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQN 185

Query: 195 AAVALNKGPARQAKCC 210
             V L K   R+ +CC
Sbjct: 186 DVVKLTKNSKRKKRCC 201


>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 208

 Score =  132 bits (333), Expect = 2e-31
 Identities = 68/164 (41%), Positives = 108/164 (65%), Gaps = 2/164 (1%)

Query: 18  RVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAG 76
           R FKLV LG  SVGK+SL  R++ + F +    T+G  F +K + +   +++L++WDTAG
Sbjct: 12  RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 71

Query: 77  QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
           QE++ S+   Y R + AA++VYDIT  +SF +  +W+ D+  E    +V++MLVGNKTDL
Sbjct: 72  QERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTE-RGSDVIIMLVGNKTDL 130

Query: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
           + +R+V+ +EG+  A    ++F+ETSAK  + V ++F  VA  L
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  132 bits (332), Expect = 2e-31
 Identities = 66/167 (39%), Positives = 109/167 (65%), Gaps = 2/167 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK+VL+G+  VGK+ L  R+ +  F      T+G  F  K V++    +KL+IWDTAGQ
Sbjct: 9   LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ S+   Y+R ANA +L YDIT ++SF    +WL+++ E+    +V+ +LVGNK DL+
Sbjct: 69  ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREI-EQYASNKVITVLVGNKIDLA 127

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRS 184
           + REV+ Q  +EF+++Q + ++ETSAK +  V ++F  +A  L+  +
Sbjct: 128 ERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEA 174


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  132 bits (331), Expect = 3e-31
 Identities = 73/180 (40%), Positives = 105/180 (58%), Gaps = 3/180 (1%)

Query: 10  PRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKS--ILPTVGCAFFTKVVDVGATSL 67
           P  +PS     K++LLG   VGK+   +++    F S   + TVG  F  KVV V    +
Sbjct: 20  PPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRV 79

Query: 68  KLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLV 127
           KL+IWDTAGQE++ SV H Y+R A A LL+YDIT K SF   + WL ++ E     +V++
Sbjct: 80  KLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ-RDVVI 138

Query: 128 MLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEE 187
           ML+GNK D+S ER +  ++G+  A    + F+ETSAK    V   F  +A+EL  R+  +
Sbjct: 139 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ 198


>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 208

 Score =  131 bits (330), Expect = 4e-31
 Identities = 67/164 (40%), Positives = 107/164 (65%), Gaps = 2/164 (1%)

Query: 18  RVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAG 76
           R FKLV LG  SVGK+SL  R++ + F +    T+G  F +K + +   +++L++WDTAG
Sbjct: 12  RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 71

Query: 77  QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
           QE++ S+   Y R +  A++VYDIT  +SF +  +W+ D+  E    +V++MLVGNKTDL
Sbjct: 72  QERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTE-RGSDVIIMLVGNKTDL 130

Query: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
           + +R+V+ +EG+  A    ++F+ETSAK  + V ++F  VA  L
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  131 bits (330), Expect = 4e-31
 Identities = 71/199 (35%), Positives = 118/199 (59%), Gaps = 9/199 (4%)

Query: 13  APSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFFTKVVDVGATSLKLEI 71
           A +   +FKL+L+G   VGK+ L +R+ +++F +  + T+G  F  + VD+    +KL++
Sbjct: 2   AKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQV 61

Query: 72  WDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVG 131
           WDTAGQE++ ++   Y+RGA   +LVYDIT + SF   Q W+K ++E    G V  +L+G
Sbjct: 62  WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG-VERLLLG 120

Query: 132 NKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQAL 191
           NK D+  +R+V  ++  + A    + F ETSAK +  V E F+++A+++L +S   G   
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS---GGRR 177

Query: 192 RGDAAVALNKGPARQAKCC 210
            G+     NK P+   K C
Sbjct: 178 SGNG----NKPPSTDLKTC 192


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  131 bits (330), Expect = 4e-31
 Identities = 66/171 (38%), Positives = 110/171 (64%), Gaps = 2/171 (1%)

Query: 14  PSQPRVFKLVLLGSGSVGKSSLALRYVKNDF-KSILPTVGCAFFTKVVDVGATSLKLEIW 72
           P    +FKL+L+G   VGKS L LR+  + + +S + T+G  F  + +++   ++KL+IW
Sbjct: 3   PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 62

Query: 73  DTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGN 132
           DTAGQE++ ++   Y+RGA+  ++VYD+T ++S+   +QWL++++       V  +LVGN
Sbjct: 63  DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASE-NVNKLLVGN 121

Query: 133 KTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQR 183
           K+DL+ ++ V     KEFADS  + F+ETSAK    V + F T+A E+ +R
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172


>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
          Length = 194

 Score =  131 bits (330), Expect = 4e-31
 Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 5/194 (2%)

Query: 18  RVFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAG 76
           R  K+ LLG   VGKSS+  R+V++ F  +I PT+G +F TK V       K  IWDTAG
Sbjct: 4   RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 63

Query: 77  QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
           QE++ ++  +Y+RG+ AA++VYDIT++++F   + W+K+L +   P  ++V + GNK DL
Sbjct: 64  QERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQH-GPPNIVVAIAGNKCDL 122

Query: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAA 196
              REV  ++ K++ADS   +F+ETSAK    ++E+F  +++ +      +     G   
Sbjct: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI---PSTDANLPSGGKG 179

Query: 197 VALNKGPARQAKCC 210
             L + P+   + C
Sbjct: 180 FKLRRQPSEPKRSC 193


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  131 bits (329), Expect = 5e-31
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 14/214 (6%)

Query: 3   QAHRTPQPRA-----APSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFF 56
           +AH  P P       A +   +FKL+L+G   VGK+ L +R+ +++F +  + T+G  F 
Sbjct: 111 RAHPIPSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFK 170

Query: 57  TKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDL 116
            + VD+    +KL++WDTAGQE++ ++   Y+RGA   +L YDIT + SF   Q W+K +
Sbjct: 171 IRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSI 230

Query: 117 EEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTV 176
            E    G V  +L+GNK D+  +R+V  ++  + A    + F ETSAK +  V E F+++
Sbjct: 231 MENASAG-VEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289

Query: 177 AQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
           A+++L +S   G    G+     NK P+   K C
Sbjct: 290 ARDILLKS---GGRRSGNG----NKPPSTDLKTC 316


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  131 bits (329), Expect = 5e-31
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 14/214 (6%)

Query: 3   QAHRTPQPRA-----APSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFF 56
           +AH  P P       A +   +FKL+L+G   VGK+ L +R+ +++F +  + T+G  F 
Sbjct: 111 RAHPIPSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFK 170

Query: 57  TKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDL 116
            + VD+    +KL++WDTAGQE++ ++   Y+RGA   +L YDIT + SF   Q W+K +
Sbjct: 171 IRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSI 230

Query: 117 EEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTV 176
            E    G V  +L+GNK D+  +R+V  ++  + A    + F ETSAK +  V E F+++
Sbjct: 231 MENASAG-VEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289

Query: 177 AQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
           A+++L +S   G    G+     NK P+   K C
Sbjct: 290 ARDILLKS---GGRRSGNG----NKPPSTDLKTC 316


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  131 bits (329), Expect = 5e-31
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 14/214 (6%)

Query: 3   QAHRTPQPRA-----APSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFF 56
           +AH  P P       A +   +FKL+L+G   VGK+ L +R+ +++F +  + T+G  F 
Sbjct: 111 RAHPIPSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFK 170

Query: 57  TKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDL 116
            + VD+    +KL++WDTAGQE++ ++   Y+RGA   +L YDIT + SF   Q W+K +
Sbjct: 171 IRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSI 230

Query: 117 EEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTV 176
            E    G V  +L+GNK D+  +R+V  ++  + A    + F ETSAK +  V E F+++
Sbjct: 231 MENASAG-VEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289

Query: 177 AQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
           A+++L +S   G    G+     NK P+   K C
Sbjct: 290 ARDILLKS---GGRRSGNG----NKPPSTDLKTC 316


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  131 bits (329), Expect = 5e-31
 Identities = 71/169 (42%), Positives = 102/169 (60%), Gaps = 3/169 (1%)

Query: 21  KLVLLGSGSVGKSSLALRYVKNDF--KSILPTVGCAFFTKVVDVGATSLKLEIWDTAGQE 78
           K +L+G   VGK+SL +++ +  F   S   TVG  F  KVV V    +KL+IWDTAGQE
Sbjct: 24  KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83

Query: 79  KYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQ 138
           ++ SV H Y+R A A LL+YDIT K SF   + WL ++ E     +V++ML+GNK D+S 
Sbjct: 84  RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ-RDVVIMLLGNKADMSS 142

Query: 139 EREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEE 187
           ER +  ++G+  A    + F+ETSAK    V   F  +A+EL  R+  +
Sbjct: 143 ERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ 191


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  130 bits (328), Expect = 6e-31
 Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 2/163 (1%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FK+VL+G   VGKS+L  R+ +N+F      T+G  F T+ + V   ++K +IWDTAGQ
Sbjct: 11  LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E+Y ++   Y+RGA  ALLVYDI +  ++   ++WLK+L +      +++MLVGNK+DL 
Sbjct: 71  ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA-DSNIVIMLVGNKSDLR 129

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
             R V   E + FA+   L F+ETSA  +  V E F  +  E+
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  129 bits (325), Expect = 1e-30
 Identities = 66/185 (35%), Positives = 116/185 (62%), Gaps = 5/185 (2%)

Query: 19  VFKLVLLGSGSVGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQ 77
           +FKL+L+G   VGK+ +  R+ ++ F S  + T+G  F  + +++    +KL+IWDTAGQ
Sbjct: 8   LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67

Query: 78  EKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLS 137
           E++ ++   Y+RGA   +LVYDIT + SF   + W++++EE     +V  M++GNK D++
Sbjct: 68  ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA-SADVEKMILGNKCDVN 126

Query: 138 QEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAV 197
            +R+V+ + G++ A    + FMETSAK N  V   F T+A+++  + D++   L G++  
Sbjct: 127 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK---LEGNSPQ 183

Query: 198 ALNKG 202
             N+G
Sbjct: 184 GSNQG 188


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.131    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,681,337
Number of Sequences: 37866
Number of extensions: 304700
Number of successful extensions: 1487
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1045
Number of HSP's gapped (non-prelim): 243
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.