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Search of human proteins with 119392094
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
(993 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 1946 0.0
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 182 1e-45
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 171 3e-42
gi|113722133 senataxin [Homo sapiens] 150 4e-36
gi|14251207 MOV10-like 1 [Homo sapiens] 123 7e-28
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 115 2e-25
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 115 2e-25
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 115 2e-25
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 115 2e-25
gi|54792138 helicase with zinc finger domain [Homo sapiens] 86 2e-16
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 85 4e-16
gi|38788372 aquarius [Homo sapiens] 71 6e-12
gi|38505213 YTH domain containing 2 [Homo sapiens] 43 0.001
gi|157266334 tubby like protein 1 [Homo sapiens] 43 0.002
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 0.002
gi|153792074 proline rich 12 [Homo sapiens] 42 0.003
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 42 0.004
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 41 0.006
gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens] 40 0.011
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 40 0.011
gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo ... 40 0.014
gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo ... 40 0.014
gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo ... 40 0.014
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 40 0.014
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 40 0.014
gi|21361684 G patch domain containing 1 [Homo sapiens] 40 0.014
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 39 0.019
gi|150378549 tangerin [Homo sapiens] 39 0.019
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 39 0.019
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 39 0.024
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 1946 bits (5042), Expect = 0.0
Identities = 993/993 (100%), Positives = 993/993 (100%)
Query: 1 MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY 60
MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
Sbjct: 1 MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY 60
Query: 61 GRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE 120
GRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE
Sbjct: 61 GRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE 120
Query: 121 SHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPAS 180
SHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPAS
Sbjct: 121 SHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPAS 180
Query: 181 EIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC 240
EIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC
Sbjct: 181 EIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC 240
Query: 241 CAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDI 300
CAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDI
Sbjct: 241 CAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDI 300
Query: 301 DQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGP 360
DQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGP
Sbjct: 301 DQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGP 360
Query: 361 LKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSL 420
LKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSL
Sbjct: 361 LKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSL 420
Query: 421 SLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAA 480
SLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAA
Sbjct: 421 SLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAA 480
Query: 481 TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSP 540
TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSP
Sbjct: 481 TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSP 540
Query: 541 YNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA 600
YNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA
Sbjct: 541 YNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA 600
Query: 601 VTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSS 660
VTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSS
Sbjct: 601 VTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSS 660
Query: 661 HAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGV 720
HAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGV
Sbjct: 661 HAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGV 720
Query: 721 ESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFI 780
ESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFI
Sbjct: 721 ESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFI 780
Query: 781 TVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQR 840
TVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQR
Sbjct: 781 TVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQR 840
Query: 841 VRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFA 900
VRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFA
Sbjct: 841 VRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFA 900
Query: 901 KCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKNGS 960
KCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKNGS
Sbjct: 901 KCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKNGS 960
Query: 961 LDPAKRAQLQRRLDKKLSELSNQRTSRRKERGT 993
LDPAKRAQLQRRLDKKLSELSNQRTSRRKERGT
Sbjct: 961 LDPAKRAQLQRRLDKKLSELSNQRTSRRKERGT 993
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 182 bits (463), Expect = 1e-45
Identities = 154/454 (33%), Positives = 221/454 (48%), Gaps = 43/454 (9%)
Query: 192 LDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGL-KVLCCAPSNIAVDN 250
L+ SQ AV L Q+ L++I GPPGTGKT T I+ +QG VL CAPSNIAVD
Sbjct: 471 LNHSQVYAVKTVL-QRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 529
Query: 251 LVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKT 310
L E++ +++RL +R +A+ + + IR ++D + K
Sbjct: 530 LTEKIHQTGLKVVRLCAKSR----------EAIDSPVSFLALHNQIR-NMDSMPELQKLQ 578
Query: 311 QDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFD 370
Q K E + + + LK E E L +A+V+ T GA K+ F
Sbjct: 579 QLKDETGELSSADEKRYRALKRTAER---ELLMNADVICCTCVGAGDPRLAKM----QFR 631
Query: 371 VVVIDECAQALEASCWIPL-LKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE 429
++IDE QA E C +P+ L A++ IL GDH QL P + KAA AGLS SL ERL
Sbjct: 632 SILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV- 690
Query: 430 YGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLL 489
G R +R L VQYRMH A+ + S+ Y G L + A + + + P+
Sbjct: 691 LGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD--FQWPQPDKPMF 747
Query: 490 LVDTAGCGLFELEEEDEQSKG----NPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQV 545
T G +E+ S G N E V L+ AG I +++PY Q
Sbjct: 748 FYVTQG-------QEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQR 800
Query: 546 DLLRQSL-------VHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRIN 598
L Q + + E+EI SVD FQGREK+ +ILS VR+N +GFL + RR+N
Sbjct: 801 SYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLN 860
Query: 599 VAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQ 632
VA+TRAR V ++ + + ++ L+ Y+ +
Sbjct: 861 VALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 171 bits (433), Expect = 3e-42
Identities = 172/651 (26%), Positives = 288/651 (44%), Gaps = 102/651 (15%)
Query: 17 LELERDAEVEERRSWQENISL---KELQSRGVCLLKL-QVSSQRTGLYGRLLVTFEPRRY 72
L L +++ ++ + +NI L E++ G C+ L ++ + G+ L F+ +
Sbjct: 532 LMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLIRMEHVKIVCDGQYLHNFQCKH- 590
Query: 73 GSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFD-------ESHDFQ 125
A+P + +GD V + L+ G + + +VT D ES F+
Sbjct: 591 ---GAIPVTNLMAGDRVIVSGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFR 647
Query: 126 LSLDRENSY------RLLKLA-NDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSP 178
L + +N L KL N ++L+ +I ++ I L S+ P
Sbjct: 648 LDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFRE------PQFISYL---SSVLP 698
Query: 179 ASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
+ L+ Q++A+ L K+ +I G PGTGKTTT+ ++ G V
Sbjct: 699 HDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSV 758
Query: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
L + ++ AVDN++ +LA K LRLG ++ +IQQ
Sbjct: 759 LLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQ--------------------- 797
Query: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
F + + + K KS A+LE L ++ +++AT T +
Sbjct: 798 -----FTEQEICRSKSIKS------------------LALLEELYNSQLIVAT-TCMGIN 833
Query: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
P+ FD ++DE +Q + C PL +R+ +L GDH+QLPP ++ +A G+
Sbjct: 834 HPI--FSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGM 891
Query: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVA-------RHL 471
S SL +RL + A V LTVQYRM+ IM ++ Y G+L S RH
Sbjct: 892 SESLFKRLEQNKSAVV--QLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHF 949
Query: 472 ------------LRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVS 519
D P + E P+ ++T E E+ S N E +L+
Sbjct: 950 KDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVS--NVTEAKLIV 1007
Query: 520 LHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSF 579
V AG DI +++PY Q+ ++ L +E+ +VD +QGR+K V++SF
Sbjct: 1008 FLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSF 1067
Query: 580 VRSNRKGEVGFLAED-RRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEY 629
VRSN+ G VG L +D RR+NVA+TRA+ + ++ ++N + L+ L+ +
Sbjct: 1068 VRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNH 1118
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 150 bits (380), Expect = 4e-36
Identities = 155/604 (25%), Positives = 260/604 (43%), Gaps = 119/604 (19%)
Query: 205 SQKELAIIHGPPGTGKTTTVVEIILQAVKQGLK----------------VLCCAPSNIAV 248
S ++ +IHGPPGTGK+ T+V ++ + + + + VL CAPSN AV
Sbjct: 1954 SVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAV 2013
Query: 249 DNLVERLAL-----CKQR-----------ILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
D L++++ L CK + ++RLG + + + SLD+ + ++
Sbjct: 2014 DELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKKEL 2073
Query: 293 VADIRKDIDQVFVKNKKTQD------KREKSNFRNEIKLLRKEL--------KEREEAA- 337
+ + Q K K+ D R+++ R ++ R+EL KER+E A
Sbjct: 2074 PSHV-----QAMHKRKEFLDYQLDELSRQRALCRGGREIQRQELDENISKVSKERQELAS 2128
Query: 338 ----------------MLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQAL 381
+LES L+T+ G + + F V++DE Q+
Sbjct: 2129 KIKEVQGRPQKTQSIIILESHIIC-CTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSC 2187
Query: 382 EASCWIPLL-KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARV------ 434
E PL+ + K IL GD KQLPPT +S KA G S+M R V
Sbjct: 2188 EIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMIS 2247
Query: 435 ---VRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLV 491
+ LTVQYRMH I + S+ +Y L + R + + + LV
Sbjct: 2248 RLPILQLTVQYRMHPDICLFPSNYVYNRNLKTN--------RQTEAIRCSSDWPFQPYLV 2299
Query: 492 DTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVD--AGVPARDIAVVSPYNLQVDLLR 549
G G E D S N E++LV I+ + D V R+I +++ Y Q +++
Sbjct: 2300 FDVGDG---SERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFRNIGIITHYKAQKTMIQ 2356
Query: 550 QSL---VHRHPELEIKSVDGFQGREKEAVILSFVRSNR-KGEVGFLAEDRRINVAVTRAR 605
+ L R E+ +VD FQGR+K+ VI++ VR+N +G +GFLA +R+NV +TRA+
Sbjct: 2357 KDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAK 2416
Query: 606 RHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHEN---------- 655
+ ++ RT+ + L++ + G + + +NY H+
Sbjct: 2417 YSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKTCD-------KNYRHDAVKILKLKPVL 2469
Query: 656 SQGSSHAAT------KPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQ 709
+ +H T +PQG S++ S + A+ K ++ S+ P +
Sbjct: 2470 QRSLTHPPTIAPEGSRPQGGLPSSKLDSGFAKTSVAASLYHTPSDSKEITLTVTSKDPER 2529
Query: 710 PSLN 713
P ++
Sbjct: 2530 PPVH 2533
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 123 bits (309), Expect = 7e-28
Identities = 146/531 (27%), Positives = 222/531 (41%), Gaps = 94/531 (17%)
Query: 185 LTFFNTCLDTSQKEAVLFALS---QKELAIIHGPPGTGKTTTVVEIILQA--VKQGLKVL 239
+ FFN L+ +QK AV LS + I+ GPPGTGKT T++E +LQ ++L
Sbjct: 738 MEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRIL 797
Query: 240 CCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKD 299
CAPSN A D + RL H +++L Q ++ V A +IV
Sbjct: 798 VCAPSNSAADLVCLRL-----------HESKVL---QPATMVRVNATCRFEEIV------ 837
Query: 300 IDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADG 359
ID V + +D + S FR I T ++ L G
Sbjct: 838 IDAVKPYCRDGEDIWKASRFRIIIT------------------TCSSSGLFYQIGVRV-- 877
Query: 360 PLKLLPESYFDVVVIDECAQALEASCWIPLLK----ARKCILAGDHKQLPPTTVSHKAAL 415
+F V +DE QA E C IPL + + +LAGD QL P S A
Sbjct: 878 -------GHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMA 930
Query: 416 AGLSLSLMERLAEE---------YGA------RVVRTLTVQYRMHQAIMRWASDTMYLGQ 460
GL++S +ERL +GA +V L YR H+A++ S Y +
Sbjct: 931 YGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLMLPSRLFYHRE 990
Query: 461 LTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSL 520
L + ++ L G + G PL+ G E E S NP E V
Sbjct: 991 LEVCADPT--VVTSLLGWEKLPKKGFPLIFHGVRGS---EAREGKSPSWFNPAEAVQVLR 1045
Query: 521 HIQAL---VDAGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAVI 576
+ L + + V A DI V++PY QV+ +R L + ++++ SV+ FQG+E +I
Sbjct: 1046 YCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVII 1105
Query: 577 LSFVRSNR------KGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYF 630
+S VRSN + +GFL+ +R NVA+TR + + V+ + + L+EY
Sbjct: 1106 ISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALLEYS 1165
Query: 631 TQHGEVRTAFEYLDDIVPENYSHENSQGSSHAATKPQGPATSTRTGSQRQE 681
+G D+ P + ++ Q P P TG ++ +
Sbjct: 1166 ITNGVYMGC-----DLPP---ALQSLQNCGEGVADPSYPVVPESTGPEKHQ 1208
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 115 bits (289), Expect = 2e-25
Identities = 122/470 (25%), Positives = 191/470 (40%), Gaps = 94/470 (20%)
Query: 211 IIHGPPGTGKTTTVVEIILQAVKQGLK--VLCCAPSNIAVDNLVERLAL-CKQRILRLGH 267
II GPPGTGKT T+VE I Q VK K +L CAPSN D L +RL + I RL
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLA 580
Query: 268 PARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLR 327
P+R D + D K + VF KK Q+ R
Sbjct: 581 PSR----------DIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYR------------- 617
Query: 328 KELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWI 387
++ +L +A +++ P +F + IDE +E +
Sbjct: 618 ---------VLITTLITAGRLVSAQ-----------FPIDHFTHIFIDEAGHCMEPESLV 657
Query: 388 PLL----------KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLA---------- 427
+ + +LAGD +QL P S GL SL+ERL
Sbjct: 658 AIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGP 717
Query: 428 EEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVP 487
+ Y + + L YR H I+ + Y G+L A + V A G P
Sbjct: 718 DGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR--ERFCRWAGLPRQGFP 775
Query: 488 LLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV-------DAGVPARDIAVVSP 540
++ G + E + S NP E V+ +++ L+ A + R + V+SP
Sbjct: 776 IIFHGVMGK---DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISP 832
Query: 541 YNLQVDLLRQSLVHRHPEL---------EIKSVDGFQGREKEAVILSFVRSNRKG----- 586
Y QV+ +R + EL ++ SV+ FQG+E+ +++S VRS++
Sbjct: 833 YRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDL 892
Query: 587 --EVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHG 634
+GFL +R NVAVTRA+ + ++ + + + K +E+ ++G
Sbjct: 893 DFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENG 942
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 115 bits (289), Expect = 2e-25
Identities = 122/470 (25%), Positives = 191/470 (40%), Gaps = 94/470 (20%)
Query: 211 IIHGPPGTGKTTTVVEIILQAVKQGLK--VLCCAPSNIAVDNLVERLAL-CKQRILRLGH 267
II GPPGTGKT T+VE I Q VK K +L CAPSN D L +RL + I RL
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLA 580
Query: 268 PARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLR 327
P+R D + D K + VF KK Q+ R
Sbjct: 581 PSR----------DIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYR------------- 617
Query: 328 KELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWI 387
++ +L +A +++ P +F + IDE +E +
Sbjct: 618 ---------VLITTLITAGRLVSAQ-----------FPIDHFTHIFIDEAGHCMEPESLV 657
Query: 388 PLL----------KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLA---------- 427
+ + +LAGD +QL P S GL SL+ERL
Sbjct: 658 AIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGP 717
Query: 428 EEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVP 487
+ Y + + L YR H I+ + Y G+L A + V A G P
Sbjct: 718 DGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR--ERFCRWAGLPRQGFP 775
Query: 488 LLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV-------DAGVPARDIAVVSP 540
++ G + E + S NP E V+ +++ L+ A + R + V+SP
Sbjct: 776 IIFHGVMGK---DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISP 832
Query: 541 YNLQVDLLRQSLVHRHPEL---------EIKSVDGFQGREKEAVILSFVRSNRKG----- 586
Y QV+ +R + EL ++ SV+ FQG+E+ +++S VRS++
Sbjct: 833 YRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDL 892
Query: 587 --EVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHG 634
+GFL +R NVAVTRA+ + ++ + + + K +E+ ++G
Sbjct: 893 DFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENG 942
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 115 bits (289), Expect = 2e-25
Identities = 146/547 (26%), Positives = 218/547 (39%), Gaps = 113/547 (20%)
Query: 163 ASSLI-EVLFGRSAPSPASEIHPLTFFNTC----------LDTSQKEAVLFALSQKELAI 211
AS L+ + GR P P + P F L+ SQ AV AL +K +
Sbjct: 2113 ASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREAL-EKPFTV 2171
Query: 212 IHGPPGTGKTTTVVEIILQAVKQ------------------GLKVLCCAPSNIAVDNL-- 251
I GPPGTGKT + I+ K G +L C PSN +VD L
Sbjct: 2172 IQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAG 2231
Query: 252 --VERLALCKQRIL------------------------RLGHPARLLESIQQHSLDAVLA 285
+ R+ L R+ R G P + L SI H
Sbjct: 2232 LLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAP 2291
Query: 286 RSDSAQIVA-DIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTS 344
S++I A D R ++F R ++ +K L E + L
Sbjct: 2292 NPYSSEIKAFDTRLQRGELFS--------------REDLVWYKKVLWEARKF----ELDR 2333
Query: 345 ANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLK---ARKCILAGDH 401
V+L T +A LK+L +++DE A E IPL++ A K +L GDH
Sbjct: 2334 HEVILCT-CSCAASASLKILDVRQ---ILVDEAGMATEPETLIPLVQFPQAEKVVLLGDH 2389
Query: 402 KQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQL 461
KQL P + + GL SL ER E+ L QYRMH+ I + S Y +L
Sbjct: 2390 KQLRPVVKNERLQNLGLDRSLFERYHED-----AHMLDTQYRMHEGICAFPSVAFYKSKL 2444
Query: 462 TAHSSVARHLLRDLPGVAA-TEETGVPLLLVDTAG---CGLFELEEEDEQSKGNPGEV-R 516
LR P V + P++ G L +E +E SK N EV
Sbjct: 2445 KTWQG-----LRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAE 2499
Query: 517 LVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAV 575
+V + Q + V +DIAV++PYN Q + ++L + + S+ QG E V
Sbjct: 2500 VVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYV 2559
Query: 576 ILSFVRSNRKGE-------------VGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAF 622
++S VR+ K + +GF+ + ++NVAVTRA+ + +I D +
Sbjct: 2560 LVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPL 2619
Query: 623 LKTLVEY 629
++L+++
Sbjct: 2620 WRSLLDF 2626
Score = 67.0 bits (162), Expect = 8e-11
Identities = 131/572 (22%), Positives = 210/572 (36%), Gaps = 111/572 (19%)
Query: 211 IIHGPPGTGKTTTVVEIILQAVKQG-LKVLCCAPSNIAVDNLVERLALCKQRILRLGHPA 269
+I+GP GTGKT T+ L+ +++ KVL C +N A D + + GHP
Sbjct: 541 LIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYF---HSHVSGGHPE 597
Query: 270 RLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKE 329
++ D L+++D + D Q F + + R +
Sbjct: 598 AT--PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHR------------- 642
Query: 330 LKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPL 389
V+ T T + + +P +F ++IDE AQ LE PL
Sbjct: 643 ------------------VVVTTTSQARE---LRVPVGFFSHILIDEAAQMLECEALTPL 681
Query: 390 LKAR---KCILAGDHKQLPPTTVSHKAALAGLSLSLMERL-------AEEYGARVVRTLT 439
A + +LAGDH Q+ P S A A +L+ RL E +
Sbjct: 682 AYASHGTRLVLAGDHMQVTPRLFSVARARAA-EHTLLHRLFLCYQQETHEVARQSRLVFH 740
Query: 440 VQYRMHQAIMRWASDTMYLGQ---LTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGC 496
YR AI+ + S Y+ + + A V H PL+ AG
Sbjct: 741 ENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH------------PRHYPLMFCHVAGS 788
Query: 497 GLFELEEEDEQSKGNPGEVRLVSLHIQALVD------AGVPARDIAVVSPYNLQVDLLRQ 550
+ S N E+ V +Q + G R I VVS + QV LRQ
Sbjct: 789 ---PDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQ 844
Query: 551 SLVHRH-PELEIKSVDGFQGREKEAVILSFVRSNRK----GEVG--FLAEDRRINVAVTR 603
L R ++ + S + GR+ V+LS V + + G + F + R +N +TR
Sbjct: 845 ELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTR 904
Query: 604 ARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVR-------TAFEYLDDIV------PEN 650
A+ + V+ D+ + + L E F + R + E ++ V P
Sbjct: 905 AQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRRRWPPR 964
Query: 651 YSHENSQGSSHAATKPQGPATSTR----TGSQRQEGGQEAAAPA----------RQGRKK 696
+ + G+ AA +P G + T + E G EA +PA +
Sbjct: 965 GTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQTEAAAA 1024
Query: 697 PAGKSLASE-APSQPSLNGGSPEGVESQDGVD 727
PAG ++ + P + + GVES + D
Sbjct: 1025 PAGDAVKEDVVPGACAAGAAAAAGVESTEAED 1056
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 115 bits (289), Expect = 2e-25
Identities = 146/547 (26%), Positives = 218/547 (39%), Gaps = 113/547 (20%)
Query: 163 ASSLI-EVLFGRSAPSPASEIHPLTFFNTC----------LDTSQKEAVLFALSQKELAI 211
AS L+ + GR P P + P F L+ SQ AV AL +K +
Sbjct: 1544 ASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREAL-EKPFTV 1602
Query: 212 IHGPPGTGKTTTVVEIILQAVKQ------------------GLKVLCCAPSNIAVDNL-- 251
I GPPGTGKT + I+ K G +L C PSN +VD L
Sbjct: 1603 IQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAG 1662
Query: 252 --VERLALCKQRIL------------------------RLGHPARLLESIQQHSLDAVLA 285
+ R+ L R+ R G P + L SI H
Sbjct: 1663 LLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAP 1722
Query: 286 RSDSAQIVA-DIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTS 344
S++I A D R ++F R ++ +K L E + L
Sbjct: 1723 NPYSSEIKAFDTRLQRGELFS--------------REDLVWYKKVLWEARKF----ELDR 1764
Query: 345 ANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLK---ARKCILAGDH 401
V+L T +A LK+L +++DE A E IPL++ A K +L GDH
Sbjct: 1765 HEVILCT-CSCAASASLKILDVRQ---ILVDEAGMATEPETLIPLVQFPQAEKVVLLGDH 1820
Query: 402 KQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQL 461
KQL P + + GL SL ER E+ L QYRMH+ I + S Y +L
Sbjct: 1821 KQLRPVVKNERLQNLGLDRSLFERYHED-----AHMLDTQYRMHEGICAFPSVAFYKSKL 1875
Query: 462 TAHSSVARHLLRDLPGVAA-TEETGVPLLLVDTAG---CGLFELEEEDEQSKGNPGEV-R 516
LR P V + P++ G L +E +E SK N EV
Sbjct: 1876 KTWQG-----LRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAE 1930
Query: 517 LVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAV 575
+V + Q + V +DIAV++PYN Q + ++L + + S+ QG E V
Sbjct: 1931 VVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYV 1990
Query: 576 ILSFVRSNRKGE-------------VGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAF 622
++S VR+ K + +GF+ + ++NVAVTRA+ + +I D +
Sbjct: 1991 LVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPL 2050
Query: 623 LKTLVEY 629
++L+++
Sbjct: 2051 WRSLLDF 2057
Score = 59.3 bits (142), Expect = 2e-08
Identities = 101/418 (24%), Positives = 158/418 (37%), Gaps = 71/418 (16%)
Query: 364 LPESYFDVVVIDECAQALEASCWIPLLKAR---KCILAGDHKQLPPTTVSHKAALAGLSL 420
+P +F ++IDE AQ LE PL A + +LAGDH Q+ P S A A
Sbjct: 87 VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAA-EH 145
Query: 421 SLMERL-------AEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQ---LTAHSSVARH 470
+L+ RL E + YR AI+ + S Y+ + + A V H
Sbjct: 146 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH 205
Query: 471 LLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVD--- 527
PL+ AG + S N E+ V +Q +
Sbjct: 206 ------------PRHYPLMFCHVAGS---PDRDMSMASWLNLAEIAQVVEKVQEAYNTWP 250
Query: 528 ---AGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAVILSFVRSN 583
G R I VVS + QV LRQ L R ++ + S + GR+ V+LS V +
Sbjct: 251 SCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTC 309
Query: 584 RK----GEVG--FLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVR 637
+ G + F + R +N +TRA+ + V+ D+ + + L E F + R
Sbjct: 310 QSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVER 369
Query: 638 -------TAFEYLDDIV------PENYSHENSQGSSHAATKPQGPATSTR----TGSQRQ 680
+ E ++ V P + + G+ AA +P G + T +
Sbjct: 370 HSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKA 429
Query: 681 EGGQEAAAPA----------RQGRKKPAGKSLASE-APSQPSLNGGSPEGVESQDGVD 727
E G EA +PA + PAG ++ + P + + GVES + D
Sbjct: 430 EPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAED 487
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 85.5 bits (210), Expect = 2e-16
Identities = 126/476 (26%), Positives = 191/476 (40%), Gaps = 121/476 (25%)
Query: 192 LDTSQKEAVLFALS----QKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIA 247
L+ QKEAVL + Q +I GP GTGKT T+ QAVK L+
Sbjct: 642 LNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLA----QAVKHILQ---------- 687
Query: 248 VDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIR-KDIDQVFVK 306
QQ + + S+SA AD+ KD +V+
Sbjct: 688 ----------------------------QQETRILICTHSNSA---ADLYIKDYLHPYVE 716
Query: 307 NKKTQDKREKSNFRNE-IKLLRKELKE---------REEAAMLESLTSANVVLATNTGAS 356
Q + + FRN +K + + + + E + VV+ T +
Sbjct: 717 AGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQ 776
Query: 357 ADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKAR---KCILAGDHKQLPPTTVSHKA 413
L L P +F +++DE AQA+E +PL A + +LAGDH QL P S A
Sbjct: 777 YLCQLDLEP-GFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFA 835
Query: 414 ALAGLSLSLMERLAEEYGA----RVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAR 469
L +SL++RL E Y A R++ L YR H+AI+ + S+ Y G+L A
Sbjct: 836 RERNLHVSLLDRLYEHYPAEFPCRIL--LCENYRSHEAIINYTSELFYEGKLMASGKQPA 893
Query: 470 HLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL---- 525
H + PL G +++E++ + N EV V ++ L
Sbjct: 894 H------------KDFYPLTFFTARG---EDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
Query: 526 ------VDAGVPARDIAVVSPYNLQVDLLRQSL-VHRHPELEIKSVDGFQGREKEAVILS 578
+D G I VV+PY QV +R L R ++ ++ V QG++ + LS
Sbjct: 939 PVAWGKLDDG----SIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLS 994
Query: 579 FVR---------------------SNRKGEVGFLAEDRRINVAVTRARRHVAVICD 613
VR S + GFL+ + +N A+TRA+ VAV+ D
Sbjct: 995 TVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 84.7 bits (208), Expect = 4e-16
Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 21/323 (6%)
Query: 288 DSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANV 347
D Q+ R + +++++ + +R+ ++ + + + + E L L A V
Sbjct: 921 DVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQV 980
Query: 348 VLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA-RKCILAGDHKQLPP 406
V T TGA+ ++L + +V+++E A+ LEA L KA + IL GDH+QL P
Sbjct: 981 VGMTTTGAAKYR--QILQKVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRP 1038
Query: 407 TT-VSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS 465
+ V A L +SL ERL + VR L Q+RM I R + +Y L H
Sbjct: 1039 SANVYDLAKNFNLEVSLFERLVK-VNIPFVR-LNYQHRMCPEIARLLTPHIYQ-DLENHP 1095
Query: 466 SVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVR-LVSLHIQA 524
SV ++ + GV++ L V+ E E ++ +S N E +V L
Sbjct: 1096 SVLKY--EKIKGVSSN------LFFVEH---NFPEQEIQEGKSHQNQHEAHFVVELCKYF 1144
Query: 525 LVDAGVPARDIAVVSPYNLQVDLLRQSLVHR-HPELEIKSVDGFQGREKEAVILSFVRSN 583
L +P++ I +++ Y Q+ LR+ + + + + VD +QG E + ++LS VRSN
Sbjct: 1145 LCQEYLPSQ-ITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSN 1203
Query: 584 RKGEVGFLAEDRRINVAVTRARR 606
++G+VGFL RI VA++RA++
Sbjct: 1204 QEGKVGFLQISNRICVALSRAKK 1226
Score = 49.7 bits (117), Expect = 1e-05
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 192 LDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEI---------ILQAVKQGLKVLCCA 242
LD SQ EA+ FAL+ +ELAII GPPGTGKT ++I + Q Q +L
Sbjct: 598 LDDSQMEALQFALT-RELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVC 656
Query: 243 PSNIAVDNLVERLALC-KQRILRLG 266
+N A+D +E + C K I+R+G
Sbjct: 657 YTNHALDQFLEGIYNCQKTSIVRVG 681
>gi|38788372 aquarius [Homo sapiens]
Length = 1485
Score = 70.9 bits (172), Expect = 6e-12
Identities = 130/527 (24%), Positives = 206/527 (39%), Gaps = 136/527 (25%)
Query: 189 NTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQ--GLKVLCCAPSNI 246
NT T + + A Q L ++ GPPGTGKT V+II + L SN
Sbjct: 798 NTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQ 857
Query: 247 AVDNLVER---LALCKQRILRLGHPARLLESIQQHS----LDAVLAR------------- 286
A++ L E+ L + ++ +LRLGH LE+ + S ++ VLAR
Sbjct: 858 ALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQK 917
Query: 287 -----SDSA------------QIVADIRKDIDQVFVKNKKTQDKREKSNF---------- 319
D++ Q+++ + I +V K D E S F
Sbjct: 918 SLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANA 977
Query: 320 --------------------RNEIKLLRKELKEREEAAMLES---------LTSANVVLA 350
IK + +L+E + +L S + A ++
Sbjct: 978 PQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAM 1037
Query: 351 TNTGASAD-GPLKLLPESYFDVVVIDECAQALEASCWIPLL---------KARKCILAGD 400
T T A+ L L Y +++ ++E AQ LE +IPLL + ++ I+ GD
Sbjct: 1038 TCTHAALKRHDLVKLGFKYDNIL-MEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGD 1096
Query: 401 HKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMH-QAIMRWASDTMYLG 459
H QLPP + ++ + + R VR + Q R + +Y
Sbjct: 1097 HHQLPP-------VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNW 1149
Query: 460 QLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGL---FEL-EEEDEQSKG----- 510
+ L +LP V E TA GL F+L ED Q G
Sbjct: 1150 RYKN--------LGNLPHVQLLPE-------FSTANAGLLYDFQLINVEDFQGVGESEPN 1194
Query: 511 -----NPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHR---HPEL--- 559
N GE V + G PA I++++ YN Q L+R + R +P +
Sbjct: 1195 PYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRP 1254
Query: 560 -EIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRAR 605
++ +VD FQG++ + ++LS VR+ VG L + RR+ VA++RAR
Sbjct: 1255 NKVTTVDRFQGQQNDYILLSLVRTR---AVGHLRDVRRLVVAMSRAR 1298
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 703 ASEAPSQPSLNGGS--------PEGVESQDGVDHFRA----------MIVEFMASKKMQL 744
+S +P QP+ GG P G G+ R + F + ++
Sbjct: 5 SSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREM 64
Query: 745 EFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKR 785
EFP SL S +R +H++++ GL S G+G R++TV K+
Sbjct: 65 EFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKK 105
Score = 35.0 bits (79), Expect = 0.35
Identities = 21/90 (23%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 196 QKEAVLFALSQKELAIIHGPPGTGKTTTVVEIIL-QAVKQGL--KVLCCAPSNIAVDNLV 252
++E ++ + + ++ +I G G+GKTT + + +L K G+ ++ C P +A +
Sbjct: 198 KQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVA 257
Query: 253 ERLALCKQRIL--RLGHPARLLESIQQHSL 280
ER+A ++ + +G+ RL + +L
Sbjct: 258 ERVAAERRERIGQTIGYQIRLESRVSPKTL 287
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 42.7 bits (99), Expect = 0.002
Identities = 68/283 (24%), Positives = 102/283 (36%), Gaps = 41/283 (14%)
Query: 641 EYLDDIVPENYSHENSQGSSHAATKP-QGPATSTRTGSQRQEGGQEAAAPARQGRKKPAG 699
E L ++ + HE S A +P Q PA + R +R E + + RK AG
Sbjct: 6 ETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKRTEAPESPCPTGSKPRKPGAG 65
Query: 700 KS-LASEAPSQPSLNGGSPEGVESQ---DGVDHFRAMIVEFMASKKMQLEFPPSLNSHDR 755
++ E PS +P+ V ++ D R F+ ++ E D
Sbjct: 66 RTGRPREEPSPDPAQARAPQTVYARFLRDPEAKKRDPRETFLVARAPDAEDEEEEEEEDE 125
Query: 756 LRVHQIAEEHG----------LRHDSSGEGKRRFITVSKRAPRPRAALGPPAGTGGPAPL 805
+ AEE LR SS + K R +A PR LG P P PL
Sbjct: 126 EDEEEEAEEKKEKILLPPKKPLREKSSADLKER----RAKAQGPRGDLGSPDPP--PKPL 179
Query: 806 Q---PVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQ---- 858
+ P T+ +++G + D + G PAS + +
Sbjct: 180 RVRNKEAPAGEGTKMRKTKKKGSGEAD------------KDPSGSPASARKSPAAMFLVG 227
Query: 859 QKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAK 901
+ P+KK K KG P EE+ E + +K N G AK
Sbjct: 228 EGSPDKKALKKKGTP-KGARKEEEEEEEAATVIKKSNQKGKAK 269
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 42.4 bits (98), Expect = 0.002
Identities = 58/254 (22%), Positives = 92/254 (36%), Gaps = 41/254 (16%)
Query: 660 SHAATKPQGPATST--RTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSP 717
S TK + P+ S+ R GS +EA +P R P+ + A + S P
Sbjct: 645 SSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPP----- 699
Query: 718 EGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKR 777
V AS Q PS ++ RV + E ++ +S +
Sbjct: 700 ----------------VRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQS 743
Query: 778 RFITVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLER 837
+R R+ G P A P PP+P Q+ Q P P P +++
Sbjct: 744 -----VRRVSSSRSVSGSPEPA---AKKPPAPPSPVQS-QSPSTNWSPAVP------VKK 788
Query: 838 LQRVRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTC 897
+ + P + +Q+ G++K +K KK K + +A+ +AA A
Sbjct: 789 AKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPA 848
Query: 898 GFAKCTAGVTTLGQ 911
A A TTL Q
Sbjct: 849 AIA---AATTTLAQ 859
Score = 30.4 bits (67), Expect = 8.6
Identities = 46/192 (23%), Positives = 64/192 (33%), Gaps = 23/192 (11%)
Query: 661 HAATKPQGPATSTRTG-----SQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGG 715
H + P P TR S R + + +P R K K P+
Sbjct: 399 HRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPR 458
Query: 716 SPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLR-HDSSGE 774
E ES++ D M ++ Q +S D +E R H +GE
Sbjct: 459 KVELSESEE--DKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGE 516
Query: 775 -GKRRFITVSKRA---PRPRAALGPPAGTGGPAPLQPV-----------PPTPAQTEQPP 819
G+RR + S+ A PR R P G +P P PP +T PP
Sbjct: 517 VGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPP 576
Query: 820 REQRGPDQPDLR 831
+R P P R
Sbjct: 577 PRRRTPSPPPRR 588
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 42.0 bits (97), Expect = 0.003
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 789 PRAALGPPAGTGGPAPLQPVPPTPAQTEQPPRE-----QRGPDQPDLRTLHLERLQRVRS 843
P L PP P+P P PP A PP E P+ PD R LHL + Q +
Sbjct: 1497 PPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPLHLAKKQETAA 1556
Query: 844 AQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPT 879
G+ + ++ G+ E+ + + A D+P+
Sbjct: 1557 VCGETDEEAGESGGEGIFRERDEFVIR---AEDIPS 1589
Score = 39.3 bits (90), Expect = 0.019
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 740 KKMQLEFPPSLNSHDRLRVHQIAEEHG--LRHDSSGEGKRRFITVSKRAPRPRAALGPPA 797
+++ ++F ++N D +RV H + SG+ K AP P+A PP
Sbjct: 1643 QRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPP- 1701
Query: 798 GTGGPAPLQPVPPTPAQTEQPPR--------EQRGPDQPD-LRTLHLERLQRVRSAQGQP 848
+P P +E+PP E P++P LR + E+ + + +P
Sbjct: 1702 --------KPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEKEKVTRGERP 1753
Query: 849 ASKEQQASGQQKLPEKKKKKAKGHPAT 875
E+ SG+Q PE + A G PAT
Sbjct: 1754 LRGERATSGRQTRPE--RSLATGQPAT 1778
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 41.6 bits (96), Expect = 0.004
Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 660 SHAATKPQGPATSTRTGSQRQEGGQEAA----APARQGRKKPAGKSLASEAPSQP----- 710
S + +P+G A + G+ E E A APA P + ++ P P
Sbjct: 35 SDSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPAGASASTPPPPAPEAQLPPFPRELAG 94
Query: 711 -SLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLN----SHDRLR----VHQI 761
S G SPEG E D D V+ + + +FPPS + S RL+ +H
Sbjct: 95 RSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLT-QFPPSQSEERSSGFRLKPPTLIHGQ 153
Query: 762 AEEHGLRHDSSGEGKRRFITVSK-RAPRPRAALG--PPAGTGGPA-PLQPVPPTPAQTE- 816
A GL E +R + + +AP+P+A P +GT G + P PA +
Sbjct: 154 APSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPD 213
Query: 817 ----QPPREQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQQ-----KLPEKKKK 867
+ P E ++ + + + PA+++ GQ KL +
Sbjct: 214 TAAWRSPSEAADEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVKLINESVD 273
Query: 868 KAK----GHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQ 911
+A GHP+ D PT ++ L + +N+ A ++ GQ
Sbjct: 274 EADMENAGHPSADTPTATNY-FLQYISSSLENSTNSADASSNKFVFGQ 320
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.8 bits (94), Expect = 0.006
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 790 RAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQP 828
R +GP G GP P P PP Q +QPP +Q P QP
Sbjct: 44 RGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQP 82
>gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
Length = 208
Score = 40.0 bits (92), Expect = 0.011
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 849 ASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTT 908
+S+ S + +PE + +A P+EE ++L K N C + G+T
Sbjct: 102 SSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKK-NRCFMCRKKVGLT- 159
Query: 909 LGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAG 953
G C+ C YC H ++H C +A A ++I +E + G
Sbjct: 160 -GFECR-CGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVG 202
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 40.0 bits (92), Expect = 0.011
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 197 KEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQA--VKQGLKVLCCAPSNIAVDNLVER 254
+E +L A++ ++ II G G+GKTT + + + + +G+K+ C P +A ++ R
Sbjct: 405 REELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAAR 464
Query: 255 LA 256
+A
Sbjct: 465 VA 466
>gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 39.7 bits (91), Expect = 0.014
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 649 ENYSHENSQGSSHAATKPQG--PATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEA 706
E + S G+ A + G P STR + +E+ P + R+ P A E+
Sbjct: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
Query: 707 P-SQPSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEH 765
P +QP+ + P +Q + ++ E Q P + +E
Sbjct: 64 PGNQPTQSMREPR-TPAQSTRESWKPTHAE-------QARAPETDQ-------RGASESP 108
Query: 766 GLRH-DSSGEGKRRFITVSKRAPR-PRAALGPPAGTGGPAPLQPVPPTPAQ----TEQPP 819
G R S+ E + + ++++PR PR A G P + +P PT A+ E P
Sbjct: 109 GNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
Query: 820 REQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQQ 859
E RG + RT HL + RV Q + +E+ Q+
Sbjct: 169 HEARGSHRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQK 208
>gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 39.7 bits (91), Expect = 0.014
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 649 ENYSHENSQGSSHAATKPQG--PATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEA 706
E + S G+ A + G P STR + +E+ P + R+ P A E+
Sbjct: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
Query: 707 P-SQPSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEH 765
P +QP+ + P +Q + ++ E Q P + +E
Sbjct: 64 PGNQPTQSMREPR-TPAQSTRESWKPTHAE-------QARAPETDQ-------RGASESP 108
Query: 766 GLRH-DSSGEGKRRFITVSKRAPR-PRAALGPPAGTGGPAPLQPVPPTPAQ----TEQPP 819
G R S+ E + + ++++PR PR A G P + +P PT A+ E P
Sbjct: 109 GNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
Query: 820 REQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQQ 859
E RG + RT HL + RV Q + +E+ Q+
Sbjct: 169 HEARGSHRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQK 208
>gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 39.7 bits (91), Expect = 0.014
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 649 ENYSHENSQGSSHAATKPQG--PATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEA 706
E + S G+ A + G P STR + +E+ P + R+ P A E+
Sbjct: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
Query: 707 P-SQPSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEH 765
P +QP+ + P +Q + ++ E Q P + +E
Sbjct: 64 PGNQPTQSMREPR-TPAQSTRESWKPTHAE-------QARAPETDQ-------RGASESP 108
Query: 766 GLRH-DSSGEGKRRFITVSKRAPR-PRAALGPPAGTGGPAPLQPVPPTPAQ----TEQPP 819
G R S+ E + + ++++PR PR A G P + +P PT A+ E P
Sbjct: 109 GNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
Query: 820 REQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQQ 859
E RG + RT HL + RV Q + +E+ Q+
Sbjct: 169 HEARGSHRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQK 208
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 39.7 bits (91), Expect = 0.014
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 764 EHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPP-REQ 822
E GL D + + K +P+ +G P P P P PPTP + P +
Sbjct: 742 EQGLHPDLASLAPLEIVPFEKASPQATVEVGGPGNLSPPLPPAPPPPTPLEESTPVLLSK 801
Query: 823 RGPDQPD----LRT-LHLERLQRVRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDL 877
GP++ D LRT L++++L+ S + + ++A+ + + K A
Sbjct: 802 GGPEREDSSRKLRTDLYIDQLKSQDSPEISSLCQGEEATPRHSDKQNSKNAASEGKGCGF 861
Query: 878 PT 879
P+
Sbjct: 862 PS 863
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 39.7 bits (91), Expect = 0.014
Identities = 52/194 (26%), Positives = 72/194 (37%), Gaps = 26/194 (13%)
Query: 662 AATKP-QGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGV 720
AA +P P T +G + + + P SL++E GG+ GV
Sbjct: 1659 AAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGV 1718
Query: 721 ES-QDGVDHFRAMI--VEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKR 777
S + +D + A + F S +PP L + +LR + GLR SG G R
Sbjct: 1719 ASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSG-GLR 1777
Query: 778 RFITVSKRAPRP-----------RAALGPPAG--TGGPAPLQP-VPPTPAQTEQ------ 817
+T + RA GPP GGP ++P VPP P T
Sbjct: 1778 DPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKL 1837
Query: 818 -PPREQRGPDQPDL 830
P E GP P L
Sbjct: 1838 LPWEEGPGPPPPPL 1851
Score = 31.2 bits (69), Expect = 5.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 791 AALGPPAGTGGPAPLQPVPPTPAQ-TEQPPREQRGPDQPDLRTLHLERLQRVRSA 844
AA G P G PAP P P P + PP G ++ D R+ L+ + SA
Sbjct: 1640 AAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSA 1694
>gi|21361684 G patch domain containing 1 [Homo sapiens]
Length = 931
Score = 39.7 bits (91), Expect = 0.014
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 45/258 (17%)
Query: 647 VPENYSHENSQGSSHAATKPQGPATS-------TRTGSQRQEGGQEAAAPARQGRKKPAG 699
+PE S +Q SS ++ +GP S T ++++ E + AR + P
Sbjct: 653 LPETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQ 712
Query: 700 KS---LASEAPSQPSLNGGSP---------EGVESQDGVDHFRAMIVEFMASKKMQLEFP 747
+S + E P L+ EG S+ +D FRA+ K
Sbjct: 713 QSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEK------- 765
Query: 748 PSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAGTGGPAPLQP 807
S +S D E+ D +G G+ F + +++ A PAP +P
Sbjct: 766 -SSSSED--------EQGDSEDDQAGSGEANFQSSQDTDLGETSSV---AHALVPAPQEP 813
Query: 808 VPPTPAQTEQ-PPREQRGPDQPDL------RTLHLERLQRVRSAQGQPASKEQQASGQQK 860
P P Q Q RE+ GP P + +TL + + ++ + + + +K++ ++K
Sbjct: 814 PPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEK 873
Query: 861 LPEKKKKKAKGHPATDLP 878
+ +K K KG P
Sbjct: 874 KKKHRKHKHKGKQKNKKP 891
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 39.3 bits (90), Expect = 0.019
Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 43/293 (14%)
Query: 660 SHAATKPQGPATSTRTGSQRQEGGQEAA----APARQGRKKPAGKSLASEAPSQP----- 710
S + +P+G A + G+ E E A APA P + ++ P P
Sbjct: 35 SDSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPAGASASTPPPPAPEAQLPPFPRELAG 94
Query: 711 -SLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLN----SHDRLR----VHQI 761
S G SPEG E D D V+ + + +FPPS + S RL+ +H
Sbjct: 95 RSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLT-QFPPSQSEERSSGFRLKPPTLIHGQ 153
Query: 762 AEEHGLRHDSSGEGKRRFITVSK-RAPRPRAALG--PPAGTGGPA-PLQPVPPTPAQTEQ 817
A GL E +R + + +AP+P+A P +GT G + P PA +
Sbjct: 154 APSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPD 213
Query: 818 PPREQRGPDQPD----LRTLHLERLQRVRSAQGQPASKEQQASGQ-----QKLPEKKK-- 866
+ + D L ++ + +++ + K+ A+ Q Q L ++ K
Sbjct: 214 TAAWRSPSEAADEVCALEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVKLI 273
Query: 867 --------KKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQ 911
+ GHP+ D PT ++ L + +N+ A ++ GQ
Sbjct: 274 NESVDEADMENAGHPSADTPTATNY-FLQYISSSLENSTNSADASSNKFVFGQ 325
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 39.3 bits (90), Expect = 0.019
Identities = 56/234 (23%), Positives = 86/234 (36%), Gaps = 42/234 (17%)
Query: 654 ENSQGSSHAATKPQG--PATSTRT---GSQRQEGGQEAAAPARQGRKKPAGKSLASEAPS 708
E Q AA + G P ++R G ++GG EA +R G + AP
Sbjct: 1188 EGPQEPKEAADRADGAAPGVASRNAVAGRASKDGGAEAPRESRPAEVPAEGLVNGAGAPG 1247
Query: 709 -------QPSLNG--GSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVH 759
+PS+NG GS + H R + + ++ +L S + D
Sbjct: 1248 GGGVRLRRPSVNGEPGSVPPPRAHGSFSHVRD--ADLLKKRRSRLRNSSSFSMDD----- 1300
Query: 760 QIAEEHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAGT------GGPAPLQPVPPTPA 813
+ G ++ EG+ AP P A GPP GG +P + PP+P
Sbjct: 1301 ---PDAGAMGAAAAEGQ---------APDPSPAPGPPTAADSQQPPGGSSPSEEPPPSPG 1348
Query: 814 QTEQPPREQRGPDQPDLRTLHLERLQRV---RSAQGQPASKEQQASGQQKLPEK 864
+ R Q LE+ QR R+A+ + + SG KL E+
Sbjct: 1349 EEAGLQRFQDTSQYVCAELQALEQEQRQIDGRAAEVEMQLRSLMESGANKLQEE 1402
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 39.3 bits (90), Expect = 0.019
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 196 QKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG-----LKVLCCAPSNIAVDN 250
++E +L L + ++ +I G G GKTT + + IL G ++C P I+ +
Sbjct: 549 ERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAIS 608
Query: 251 LVERLALCKQRILRLG 266
+ ER+A K+R R+G
Sbjct: 609 VAERVA--KERAERVG 622
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 38.9 bits (89), Expect = 0.024
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 26/121 (21%)
Query: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPRE--------QRGP------------DQPDL 830
AA GPP G P QP PP P Q RE QR P D
Sbjct: 170 AAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVKQEPPQIDAVKR 229
Query: 831 RTL------HLERLQRVRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFE 884
RTL LE+++R + + + EQQ S K +K + A+G LP F+
Sbjct: 230 RTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATEDAEGGDGPRLPQRSKFD 289
Query: 885 A 885
+
Sbjct: 290 S 290
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,878,961
Number of Sequences: 37866
Number of extensions: 1971644
Number of successful extensions: 16122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 392
Number of HSP's that attempted gapping in prelim test: 14284
Number of HSP's gapped (non-prelim): 2104
length of query: 993
length of database: 18,247,518
effective HSP length: 112
effective length of query: 881
effective length of database: 14,006,526
effective search space: 12339749406
effective search space used: 12339749406
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.