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Search of human proteins with 239756835
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756835 PREDICTED: hypothetical protein [Homo sapiens]
(386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756835 PREDICTED: hypothetical protein [Homo sapiens] 773 0.0
gi|239751316 PREDICTED: hypothetical protein XP_002347803 [Homo ... 501 e-142
gi|239745815 PREDICTED: hypothetical protein XP_002343596 [Homo ... 501 e-142
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 45 1e-04
gi|145207994 hairy and enhancer of split 7 [Homo sapiens] 42 7e-04
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 42 0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 42 0.001
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 41 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.003
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 40 0.005
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 40 0.005
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 40 0.005
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 40 0.005
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 40 0.005
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 39 0.006
gi|157168329 formin 1 [Homo sapiens] 39 0.008
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 39 0.008
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.008
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 39 0.008
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 39 0.010
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 39 0.010
gi|41352718 deltex homolog 1 [Homo sapiens] 39 0.010
gi|110815800 WD repeat domain 32 [Homo sapiens] 38 0.014
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 38 0.014
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 38 0.014
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 38 0.018
gi|166362732 ELK1 protein [Homo sapiens] 38 0.018
gi|166362730 ELK1 protein [Homo sapiens] 38 0.018
>gi|239756835 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 773 bits (1997), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA 300
GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA
Sbjct: 241 GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA 300
Query: 301 RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGG 360
RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGG
Sbjct: 301 RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGG 360
Query: 361 SRRGQRTELGVVGRRLLRTLAKAATQ 386
SRRGQRTELGVVGRRLLRTLAKAATQ
Sbjct: 361 SRRGQRTELGVVGRRLLRTLAKAATQ 386
>gi|239751316 PREDICTED: hypothetical protein XP_002347803 [Homo
sapiens]
Length = 317
Score = 501 bits (1291), Expect = e-142
Identities = 267/335 (79%), Positives = 272/335 (81%), Gaps = 25/335 (7%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA 300
GFRRKTLTS + +RGA R P+ P+ R P
Sbjct: 241 GFRRKTLTSNLWFAE---------------------LRGALGPNRATPKSPRPGPQRAPC 279
Query: 301 RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSP 335
R G H P R PR + PL P
Sbjct: 280 RRCRVALDGTGPHLPRDGWDR----PRGRSPPLCP 310
>gi|239745815 PREDICTED: hypothetical protein XP_002343596 [Homo
sapiens]
Length = 317
Score = 501 bits (1291), Expect = e-142
Identities = 267/335 (79%), Positives = 272/335 (81%), Gaps = 25/335 (7%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA 300
GFRRKTLTS + +RGA R P+ P+ R P
Sbjct: 241 GFRRKTLTSNLWFAE---------------------LRGALGPNRATPKSPRPGPQRAPC 279
Query: 301 RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSP 335
R G H P R PR + PL P
Sbjct: 280 RRCRVALDGTGPHLPRDGWDR----PRGRSPPLCP 310
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 44.7 bits (104), Expect = 1e-04
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 268 IQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGPAPR 327
I+K+ G V+ RR P P P P P P PP G P PA+GR P P
Sbjct: 259 IEKTGGVEAVKNELRRQAPPPPPPSRGGPPPP--PPPPHNSGPP---PPPARGRGAPPPP 313
Query: 328 PLATP-LSPTIPAPDSPHLSMGP 349
P P +P P P P +++ P
Sbjct: 314 PSRAPTAAPPPPPPSRPSVAVPP 336
Score = 35.0 bits (79), Expect = 0.11
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 281 PRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAP 340
P R R P P AP P PP + P P R+ P P P +P+ P P
Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAV--PPPPPNRMYPPPPPALPSSAPSGPPP 360
Query: 341 DSPH-LSMGP 349
P L +GP
Sbjct: 361 PPPSVLGVGP 370
>gi|145207994 hairy and enhancer of split 7 [Homo sapiens]
Length = 225
Score = 42.4 bits (98), Expect = 7e-04
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 281 PRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGP---------APRP--- 328
P+ RP+P DP+ APR P P G A RP QG P +PR
Sbjct: 128 PKPPRPKPVDPRPPAPRPSLDPAAPALGPALHQRPPVHQGHPSPRCAWSPSLCSPRAGDS 187
Query: 329 -LATPLSPTIPAPDSPHLSMGPDRA 352
PL+ +P P PH G +A
Sbjct: 188 GAPAPLTGLLPPPPPPHRQDGAPKA 212
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 42.0 bits (97), Expect = 0.001
Identities = 41/126 (32%), Positives = 49/126 (38%), Gaps = 21/126 (16%)
Query: 273 GRSLVRGAPRRARPEPRD---------PQVAAPRTPARPLP-----PVQGGARWHRPSPA 318
G S R AP P P D P + P +PARP P P + + PS A
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHA 62
Query: 319 QGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQRTELGVVGRRLLR 378
+P P A P +P P GP A G+ R G R QR V R L
Sbjct: 63 -STSSRSPPPRARRTEPAVP----PSCGSGPGAA--GALRMGLGRTQRAARVAVSRALAG 115
Query: 379 TLAKAA 384
T+A AA
Sbjct: 116 TVAAAA 121
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 42.0 bits (97), Expect = 0.001
Identities = 41/126 (32%), Positives = 49/126 (38%), Gaps = 21/126 (16%)
Query: 273 GRSLVRGAPRRARPEPRD---------PQVAAPRTPARPLP-----PVQGGARWHRPSPA 318
G S R AP P P D P + P +PARP P P + + PS A
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHA 62
Query: 319 QGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQRTELGVVGRRLLR 378
+P P A P +P P GP A G+ R G R QR V R L
Sbjct: 63 -STSSRSPPPRARRTEPAVP----PSCGSGPGAA--GALRMGLGRTQRAARVAVSRALAG 115
Query: 379 TLAKAA 384
T+A AA
Sbjct: 116 TVAAAA 121
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 276 LVRGAPRRARPEPRDPQVAAPR--TPARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPL 333
+V G R+ P P P AP TP P PP +GG P PA GR GP P P
Sbjct: 331 IVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPP-PPPPPATGRSGPLPPPPPGAG 389
Query: 334 SPTIPAPDSPHLSMGPDRAGSGSG 357
P +P P P P SG+G
Sbjct: 390 GPPMPPPPPP----PPPPPSSGNG 409
Score = 32.0 bits (71), Expect = 0.97
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 281 PRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPA-----QGRLGPAPRPLATPLSP 335
P R P P P P P PP GG P P GPAP PL L P
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVP 421
>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 664
Score = 41.2 bits (95), Expect = 0.002
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 177 VLAPEWI--PESLGLPK-EASPLWL-AAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQ 232
+LA W+ +L LP P W +APG + LQ G+ T++S++ L
Sbjct: 12 LLAALWMVSASALNLPSTHKDPGWPPSAPGTSALQ--GNSKKTLLSLNIL---------P 60
Query: 233 ELSDKLVLGFRRK---TLTSRKRVGKVCAGLQKA-CTFTIQKSNGRSL---VRGAPRRAR 285
+ D + L RK T + + +G Q+A ++ S+ +++ G P RA
Sbjct: 61 AIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAP 120
Query: 286 PEPRDPQVAAP---RTP-ARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTI---P 338
P P +A P RTP ++P+ V G PA+ L P +A PL P+ P
Sbjct: 121 PGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP 180
Query: 339 APDSPHLSMGPD 350
+P SP + G D
Sbjct: 181 SPSSPRVPGGAD 192
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/240 (26%), Positives = 81/240 (33%), Gaps = 41/240 (17%)
Query: 135 LDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAPEWIPESLGLPKEAS 194
L Y L +GE++G+P G P PT+ + + P + + LP+E+
Sbjct: 15 LKLYNGLSEGEAVGLPAGPDPLDPTDLNGAHFDPEVYLDK--------------LPRESP 60
Query: 195 PLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVLGFRR----KTLTSR 250
L Q S D V I L S L E DK + K S
Sbjct: 61 ----------LAQLMDSETDMVQQIRAL-DSDMQTLVYENYDKFIPATEMTNSIKLPPSA 109
Query: 251 KRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAP--RTPARPLPPVQG 308
K + G C GR R P RA P+ D R RP P V
Sbjct: 110 KSINVSGIGRPSGCNLV---GAGRRC-RAWPERAWPQAGDSDCLGQGRRAQRRPGPGVSA 165
Query: 309 -GARWHRPSPAQGRLG-----PAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSR 362
GA + +P PAP P + P PT PA P + P G S G R
Sbjct: 166 VGASGQQRAPESNERPAEEPTPAPMPSSAPRGPTEPALRRPSSADRPLAPGPSSSPGAGR 225
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/85 (38%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 283 RARPEPRDPQVAAPRTPARPLPPVQGG--ARWHRPSP--AQGRLGPAPRPLATPLSPTIP 338
RARP PQ P +P RPL P A RP P + G P P A P P
Sbjct: 94 RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPE-P 152
Query: 339 APDSPHLSMGP----DRAGSGSGRG 359
AP P GP RAG G G G
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPG 177
Score = 30.4 bits (67), Expect = 2.8
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 15/101 (14%)
Query: 273 GRSLVRGAPRRARPE-PRDPQVAAPRTPARPLPPVQ---GGARWHRPSPAQGR--LGPA- 325
G +V G+P A P P AP P P + GG RP P R L PA
Sbjct: 59 GNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAG 118
Query: 326 PRPLATPLSP--------TIPAPDSPHLSMGPDRAGSGSGR 358
P P A L P P P + ++ GP+ A +G +
Sbjct: 119 PAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 275 SLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLS 334
SLV P P P+ AAP T + PP G A P+PA AP P A +
Sbjct: 216 SLVNNGPAALLPLPKP---AAPGTVIQT-PPFVGAAA--PPAPAAPSPPAAPAPAAPAAA 269
Query: 335 PTIPAPDSPHLSMGP 349
P P P L+ P
Sbjct: 270 PPPPPPAPATLARPP 284
Score = 29.6 bits (65), Expect = 4.8
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Query: 291 PQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPD 350
P AAP PA P P A P P RP P P AP P P
Sbjct: 250 PAPAAPSPPAAPAPAAPAAA----PPPPPPAPATLARPPGHPAGPPTAAPAVP-----PP 300
Query: 351 RAGSGSGRGGS 361
A G G+
Sbjct: 301 AAAQNGGSAGA 311
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 39.7 bits (91), Expect = 0.005
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 219 ISKLVHSKRAELKQELSDKLVLGFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVR 278
+ + V +RA L+Q + ++L+ ++ R + + ++ +++ +
Sbjct: 862 LEQRVALRRALLEQRVEEELLALQTGRSERIRSLLERQAREIEAFDAESMRLGFSSMALG 921
Query: 279 GAPRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIP 338
G P A + AP P+RP+P + GA W P G PA R P++
Sbjct: 922 GIPAEAAAQGYPAPPPAPAWPSRPVP--RSGAHWSHGPPPPGMPPPAWR------QPSLL 973
Query: 339 APDSPHLSMGPDRAGSGSGRGGS 361
AP P +GP SG+ RGG+
Sbjct: 974 APPGPPNWLGPP-TQSGTPRGGA 995
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 39.7 bits (91), Expect = 0.005
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 268 IQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGR-LGPA 325
+ + SL+ G P+ A P+ + P P +P PP QGG + P P G+ GP
Sbjct: 23 VSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 82
Query: 326 PRPLATPLSPTIPAPDSPHLSMGPDRAGSGS 356
P+ P P P P P GP G S
Sbjct: 83 PQGGNKPQGP--PPPGKP---QGPPPQGDKS 108
Score = 36.2 bits (82), Expect = 0.051
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 273 GRSLVRGAPRRARPEPRDPQVAAPRTPARPL-----PPVQGGARWHRPSPAQGR-LGPAP 326
G + +G P +P+ PQ R+P P PP QGG + P P G+ GP P
Sbjct: 85 GGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 144
Query: 327 RPLATPLSPTIPAPDSPHLSMGPDRAGSGSGR 358
+ P P P P P GP G R
Sbjct: 145 QGGNKPQGP--PPPGKP---QGPPPQGDNKSR 171
Score = 33.9 bits (76), Expect = 0.25
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 279 GAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGR-LGPAPRPLATPLSPT 336
G P+ P+ + +A P +P PP QGG + P P G+ GP P+ P P
Sbjct: 219 GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP- 277
Query: 337 IPAPDSPHLSMGPDRAGSGSGR 358
P P P GP G R
Sbjct: 278 -PPPGKP---QGPPPQGGSKSR 295
Score = 32.0 bits (71), Expect = 0.97
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 279 GAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGR-LGPAPRPLATPLSPT 336
G P+ P+ ++ P +P PP QGG + P P G+ GP P+ P P
Sbjct: 281 GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP- 339
Query: 337 IPAPDSPHLSMGPDRAGSGSGR 358
P P P GP G R
Sbjct: 340 -PPPGKP---QGPPPQGGSKSR 357
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 279 GAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGR-LGPAPRPLATPLSPT 336
G P+ P+ + ++ P +P PP QGG + P P G+ GP P+ P P
Sbjct: 157 GKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 216
Query: 337 IPAPDSPHLSMGPDRAGSGSGRGGSRRG 364
P G +++ S G +G
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQG 244
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 270 KSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAPR- 327
KS G P+ P+ + P P +P PP QGG + P P GP P+
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 228
Query: 328 ------PLATPLSPTIPAPDSPHLSMGP 349
+ P P P P + GP
Sbjct: 229 DNKSQSARSPPGKPQGPPPQGGNQPQGP 256
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 270 KSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAPR- 327
KS G P+ P+ + P P +P PP QGG + P P GP P+
Sbjct: 231 KSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 290
Query: 328 ------PLATPLSPTIPAPDSPHLSMGP 349
+ P P P P + GP
Sbjct: 291 GSKSRSSRSPPGKPQGPPPQGGNQPQGP 318
Score = 31.2 bits (69), Expect = 1.7
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 270 KSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAPRP 328
KS G P+ P+ + P P +P PP QGG + P P GP P+
Sbjct: 293 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 352
Query: 329 LATPLSPTIP--APDSPHLSMGPDRAGSGSGRGGS 361
+ S P P P G + G GG+
Sbjct: 353 GSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGN 387
Score = 30.8 bits (68), Expect = 2.2
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 279 GAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAPR-------PLA 330
G P+ P+ + P P +P PP QGG + P P GP P+ +
Sbjct: 116 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRS 175
Query: 331 TPLSPTIPAPDSPHLSMGP 349
P P P P + GP
Sbjct: 176 PPGKPQGPPPQGGNQPQGP 194
Score = 30.8 bits (68), Expect = 2.2
Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 21/103 (20%)
Query: 281 PRRARPEPRDPQVAAPR---------TPARPL-PPVQGGARWHRP-SPAQGRLGPAPR-- 327
P+ P P PQ P+ P +P PP QGG++ SP GP P+
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGG 312
Query: 328 -----PLATPLSPTIPAPDSPHLSMGPDRAGSGSG---RGGSR 362
P P P P P + GP G G +GGS+
Sbjct: 313 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSK 355
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 278 RGAPRRARPEPRDPQVAAPR-TPARPLPPVQGGARWHRPSPAQGR 321
RG+P RARP P P A PR PA P PP G R SP R
Sbjct: 88 RGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARR 132
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 278 RGAPRRARPEPRDPQVAAPR-TPARPLPPVQGGARWHRPSPAQGR 321
RG+P RARP P P A PR PA P PP G R SP R
Sbjct: 88 RGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARR 132
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/167 (29%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 185 ESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL-GFR 243
ES+G+ K+A G T+ + L+ +R + ++ S+ L L G
Sbjct: 468 ESMGIRKDAK---------------GISIQTLRHLESLLRVQREQKARKFSEFLSLRGKL 512
Query: 244 RKTLTSR-KRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPARP 302
K +TSR K + A + + KS +LV R A+P+ R QVA P TPA P
Sbjct: 513 VKEVTSRAKERQENGAAVSQPDGQPSVKSQQSALVT---REAQPKTRTLQVALPSTPAEP 569
Query: 303 LPPVQGGARWHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGP 349
PP + H S Q PAP P S T P P +S P
Sbjct: 570 PPPTRQSHGSHGSSLTQVS-APAPHPGLHGPSST-PPSSGPGMSTPP 614
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 39.3 bits (90), Expect = 0.006
Identities = 44/123 (35%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 281 PRRARP--EPRDPQVAAPRTPARPLPPVQGGARWHRPSP---AQGRLGPAPRP------- 328
P RARP PR P AA P RP P + R RP A G PAPRP
Sbjct: 73 PLRARPGCRPRRPHPAARCLPLRPHRPTR---RHRRPGGFPLAWGSPQPAPRPAPGRSSA 129
Query: 329 --LATPLSPTIPAPDSPHLSMGPDR-AGSGSGRGGSR--RGQRTELGVVGRRLLRTLAKA 383
LA +P + P S G G GS RGG G R G R RT+ A
Sbjct: 130 LALAGGAAPGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPGDRGPAAADGGRPQRTVRAA 189
Query: 384 ATQ 386
T+
Sbjct: 190 ETR 192
Score = 29.6 bits (65), Expect = 4.8
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 296 PRTPARPLPPVQGGARWHRPSP----AQGRLGPAPRPL-ATP-LSPTIPAPDSPHLSMGP 349
PRTP LP + G RP+P G LG RPL A P P P P + L + P
Sbjct: 37 PRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARCLPLRP 96
Query: 350 DR 351
R
Sbjct: 97 HR 98
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 38.9 bits (89), Expect = 0.008
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 271 SNGRSLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRL------GP 324
SN + + P P P P +PA P+PPV G P P L GP
Sbjct: 639 SNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGP 698
Query: 325 APRPLATPLSPTIPAPDSP 343
P P PL P PAP +P
Sbjct: 699 PPPPPPPPL-PNSPAPPNP 716
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 38.9 bits (89), Expect = 0.008
Identities = 30/88 (34%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 254 GKVCAGLQKACTFTIQKSNGR-SLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQGGARW 312
GK G F S GR ++G PR P P P AA R P P GA
Sbjct: 240 GKETEGSLSDSDFKEPPSEGRLDALQGPPRTGGPSPAGP--AAARLAEDPAPHYPAGAPA 297
Query: 313 HRPSPAQGRLGPAPRPLATPLSPTIPAP 340
P PA G + P P + SP P P
Sbjct: 298 PGPHPAAGEVPPGPGGPSVIHSPPPPPP 325
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.9 bits (89), Expect = 0.008
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 268 IQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAP 326
+ + SL+ G P+ P+ + P P +P PP QGG + P P GP P
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 82
Query: 327 R------PLATPLSPTIPAPDSPHLSMGP 349
+ P + P P P P + GP
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGNQPQGP 111
Score = 36.2 bits (82), Expect = 0.051
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 273 GRSLVRGAPRRARPEPRDPQVAAPRTPARPL-----PPVQGGARWHRPSPAQGR-LGPAP 326
G + +G P +P+ PQ R+P P PP QGG + P P G+ GP P
Sbjct: 125 GGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 184
Query: 327 RPLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQ 365
+ P P P P P GP G S S G+
Sbjct: 185 QGGKKPQGP--PPPGKP---QGPPPQGDKSRSSQSPPGK 218
Score = 33.1 bits (74), Expect = 0.43
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 278 RGAPRRARPEPRDPQVAAPRT----PARPL-PPVQGGARWHRPSPAQGR-LGPAPRPLAT 331
+G P +P+ PQ R+ P +P PP QGG + P P G+ GP P+
Sbjct: 191 QGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 250
Query: 332 PLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQRTELG 370
P P P + G ++ S G +G + G
Sbjct: 251 PQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG 289
Score = 31.6 bits (70), Expect = 1.3
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 282 RRARPEPRDPQVAAPR----------TPARPL-PPVQGGARWHRPSPAQGRLGPAPR--- 327
R R P PQ P+ P +P PP QGG R P P GP P+
Sbjct: 88 RSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDK 147
Query: 328 ---PLATPLSPTIPAPDSPHLSMGP 349
P + P P P P + GP
Sbjct: 148 SRSPRSPPGKPQGPPPQGGNQPQGP 172
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 279 GAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAPR------PLAT 331
G P+ P+ + P P +P PP QGG + P P GP P+ +
Sbjct: 156 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSP 215
Query: 332 PLSPTIPAPDSPHLSMGP 349
P P P P + GP
Sbjct: 216 PGKPQGPPPQGGNQPQGP 233
Score = 28.9 bits (63), Expect = 8.2
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 281 PRRARPEPRDPQVAAPR---------TPARPL-PPVQGGARWHRP-SPAQGRLGPAPRPL 329
P+ P P PQ P+ P +P PP QGG++ SP GP +
Sbjct: 230 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG 289
Query: 330 ATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQR 366
P P PA +P P AG G +G R
Sbjct: 290 NNPQGPPPPAGGNPQQPQAPP-AGQPQGPPRPPQGGR 325
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 38.9 bits (89), Expect = 0.008
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 7/105 (6%)
Query: 268 IQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPARPL-PPVQGGARWHRPSPAQGRLGPAP 326
+ + SL+ G P+ P+ + P P +P PP QGG + P P GP P
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 82
Query: 327 R------PLATPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQ 365
+ P + P P P P P + GS S S G+
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGK 127
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 38.5 bits (88), Expect = 0.010
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 295 APRTPARPLPPVQGG--ARWHRPS--PAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPD 350
AP +PARP+ P G + W P P G L P P+P P S P SP GP+
Sbjct: 96 APASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLLSSPSWG-GPE 154
Query: 351 RAG-SGSGRGGS 361
G +G G GS
Sbjct: 155 PEGRAGGGIPGS 166
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 38.5 bits (88), Expect = 0.010
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 282 RRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLG--PAPRPLATPLSPTIPA 339
+++ PEP D + AP+ ARP PP +PSPA PAP P A +P
Sbjct: 2373 KKSPPEPVDKRAKAPK--ARPAPP--------QPSPAPPAFTSCPAPEPFAELPAPATSL 2422
Query: 340 PDSPHLSMGPD-------RAGSGSGRGGSRR-GQRTEL 369
+P ++M RA SG G RR G+ EL
Sbjct: 2423 APAPLITMPATRPKPKKARAAEESGAKGPRRPGEEAEL 2460
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 38.5 bits (88), Expect = 0.010
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 254 GKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTP-----ARPLPPVQG 308
G+ C+ Q+ ++ +++ R+A P P P P P RP G
Sbjct: 197 GQPCS-CQQCLLVNSTRAASNAILASQRRKAPPAPPLPPPPPPGGPPGALAVRPSATFTG 255
Query: 309 GARWHRPSPAQGRLGPAPRPLATPLSPTIP----APDSPHLSM-GPDRAGSGSGR 358
A W +PA G PAP P A P SP P P +L+ GP R S S R
Sbjct: 256 AALW--AAPAAGPAEPAPPPGAPPRSPGAPGGARTPGQNNLNRPGPQRTTSVSAR 308
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 38.1 bits (87), Expect = 0.014
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 286 PEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGRLG-PAPRPLATPLSPTIPAPDSPH 344
P P P A P P + GA P+P G LG P +T +P P+P SP
Sbjct: 35 PSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSPP 94
Query: 345 LSM-GPDRAGSGSGRGGSRRGQRTELGVVGRRL 376
GPD GR G G LG G RL
Sbjct: 95 CRRPGPDCRAKSRGRHGLGAG----LGGPGARL 123
>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
sapiens]
Length = 609
Score = 38.1 bits (87), Expect = 0.014
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 23/117 (19%)
Query: 280 APRRARPEPRDPQVAAPRTPARPL---PPVQGGARWHRP---SPAQGRLGP-APRPL--- 329
A R+A R+P AP TPARPL P + G R RP + RLGP AP P
Sbjct: 403 ATRQAACRDREP---APETPARPLALGPLPRPGLRSARPPRQCRGEHRLGPHAPMPSPRC 459
Query: 330 ---------ATPLSPTIPAPDSPHLSMGPD-RAGSGSGRGGSRRGQRTELGVVGRRL 376
SP+ P D +S P A GSG G R G + G G R+
Sbjct: 460 PGEAQGVTDGRRASPSAPGGDQDRVSTTPQPTAQPGSGAGPQRPGPTQKRGGRGVRV 516
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 38.1 bits (87), Expect = 0.014
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 272 NGRSLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQG---GARWHRPSPAQGRLGPAPRP 328
NG L PR RP RD P+ RP P G G+R R +PAQG PAP P
Sbjct: 2358 NGLELPERTPRPDRPRARD----RPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPP 2413
Query: 329 LAT 331
T
Sbjct: 2414 PPT 2416
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 37.7 bits (86), Expect = 0.018
Identities = 37/96 (38%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 272 NGRSLVRGAPRRARPEPRDPQVAAPRTPARPLPPVQGGARWHRPSPAQGR-LGPAPRPLA 330
+G L R RRARP P P++ APR P RP P PSP GR GPA R A
Sbjct: 139 SGDVLRRAGRRRARPPPV-PRLPAPRAPRRPRGPATPD-----PSPPAGRPHGPAGR-AA 191
Query: 331 TPLSPTIPAPDSPHLSMGPDRAGSGSGRGGSRRGQR 366
P A G R G GG R+ QR
Sbjct: 192 PGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQR 227
>gi|166362732 ELK1 protein [Homo sapiens]
Length = 428
Score = 37.7 bits (86), Expect = 0.018
Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 25/226 (11%)
Query: 142 PKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAPEWIPESLGLPKEASPLWLAAP 201
PKG + PGG S S + + Q P ++ LP A+P AAP
Sbjct: 134 PKGAGMAGPGGLARSSRNEYMRSGLYSTFTIQSLQPQPPPHPRPAVVLPS-AAPAGAAAP 192
Query: 202 GRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVLGFRRKTLTSRKRVGKVCAGLQ 261
+GS + + + + ++ A L ++ ++ L S + V GL
Sbjct: 193 ------PSGSRSTSPSPLEACLEAEEAGLPLQV---ILTPPEAPNLKSEEL--NVEPGLG 241
Query: 262 KACTFTIQKSNGRSLVRGA------PRRARPEPR-DPQVAAP-RTPARPLPPV--QGGAR 311
+A ++ + + A P + EP PQ P R PA + GG
Sbjct: 242 RALPPEVKVEGPKEELEVAGERGFVPETTKAEPEVPPQEGVPARLPAVVMDTAGQAGGHA 301
Query: 312 WHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSG 357
P +Q + G PR L PLSP++ P + G +GSGSG
Sbjct: 302 ASSPEISQPQKGRKPRDLELPLSPSLLGGPGPERTPG---SGSGSG 344
>gi|166362730 ELK1 protein [Homo sapiens]
Length = 428
Score = 37.7 bits (86), Expect = 0.018
Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 25/226 (11%)
Query: 142 PKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAPEWIPESLGLPKEASPLWLAAP 201
PKG + PGG S S + + Q P ++ LP A+P AAP
Sbjct: 134 PKGAGMAGPGGLARSSRNEYMRSGLYSTFTIQSLQPQPPPHPRPAVVLPS-AAPAGAAAP 192
Query: 202 GRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVLGFRRKTLTSRKRVGKVCAGLQ 261
+GS + + + + ++ A L ++ ++ L S + V GL
Sbjct: 193 ------PSGSRSTSPSPLEACLEAEEAGLPLQV---ILTPPEAPNLKSEEL--NVEPGLG 241
Query: 262 KACTFTIQKSNGRSLVRGA------PRRARPEPR-DPQVAAP-RTPARPLPPV--QGGAR 311
+A ++ + + A P + EP PQ P R PA + GG
Sbjct: 242 RALPPEVKVEGPKEELEVAGERGFVPETTKAEPEVPPQEGVPARLPAVVMDTAGQAGGHA 301
Query: 312 WHRPSPAQGRLGPAPRPLATPLSPTIPAPDSPHLSMGPDRAGSGSG 357
P +Q + G PR L PLSP++ P + G +GSGSG
Sbjct: 302 ASSPEISQPQKGRKPRDLELPLSPSLLGGPGPERTPG---SGSGSG 344
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,128,716
Number of Sequences: 37866
Number of extensions: 1032958
Number of successful extensions: 9107
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 597
Number of HSP's that attempted gapping in prelim test: 7253
Number of HSP's gapped (non-prelim): 2064
length of query: 386
length of database: 18,247,518
effective HSP length: 104
effective length of query: 282
effective length of database: 14,309,454
effective search space: 4035266028
effective search space used: 4035266028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.