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Search of human proteins with 239756701
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 664 0.0
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ... 658 0.0
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ... 644 0.0
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 43 4e-04
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 42 6e-04
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 42 6e-04
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|239752728 PREDICTED: hypothetical protein [Homo sapiens] 39 0.008
gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo ... 39 0.008
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.011
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.011
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 38 0.011
gi|238859651 pleckstrin homology domain containing family A memb... 37 0.031
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 36 0.041
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 36 0.053
gi|23510333 pygopus homolog 2 [Homo sapiens] 36 0.053
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 36 0.053
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 35 0.070
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 35 0.070
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.070
gi|217416343 fibrosin-like 1 [Homo sapiens] 34 0.16
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 34 0.16
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 34 0.20
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 34 0.20
gi|239748653 PREDICTED: hypothetical protein [Homo sapiens] 34 0.20
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 34 0.20
gi|239742678 PREDICTED: hypothetical protein XP_002342581 [Homo ... 34 0.20
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 34 0.20
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 664 bits (1712), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATR 60
MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATR
Sbjct: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATR 60
Query: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQR 120
EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQR
Sbjct: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQR 120
Query: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
ARARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE
Sbjct: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
Query: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR
Sbjct: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
Query: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP
Sbjct: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
Query: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
GSAARAGAWVEEKRSGEGSRKRLES
Sbjct: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
Length = 325
Score = 658 bits (1697), Expect = 0.0
Identities = 322/325 (99%), Positives = 323/325 (99%)
Query: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATR 60
MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGP+QRGPRLRLGGSGTRQLQQAAATR
Sbjct: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATR 60
Query: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQR 120
EGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR RASQRAGRHPVEAELGPAQRAVQQEQR
Sbjct: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQR 120
Query: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
ARARAPGRVPGGRPRLLQQSRPPLPRRHG QRPVVLRVRAVHPSLQVCHLGEGLPSGEGE
Sbjct: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
Query: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR
Sbjct: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
Query: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP
Sbjct: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
Query: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
GSAARAGAWVEEKRSGEGSRKRLES
Sbjct: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
Length = 368
Score = 644 bits (1661), Expect = 0.0
Identities = 315/318 (99%), Positives = 316/318 (99%)
Query: 8 AVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEA 67
AVLGQLEQAALGQQALGAVVDILQGAGGP+QRGPRLRLGGSGTRQLQQAAATREGEEGEA
Sbjct: 51 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 110
Query: 68 GGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 127
GGLSDQPGVMRTQGRTVGVAALHAR RASQRAGRHPVEAELGPAQRAVQQEQRARARAPG
Sbjct: 111 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 170
Query: 128 RVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
RVPGGRPRLLQQSRPPLPRRHG QRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH
Sbjct: 171 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 230
Query: 188 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 247
SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP
Sbjct: 231 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 290
Query: 248 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 307
TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG
Sbjct: 291 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 350
Query: 308 AWVEEKRSGEGSRKRLES 325
AWVEEKRSGEGSRKRLES
Sbjct: 351 AWVEEKRSGEGSRKRLES 368
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 42.7 bits (99), Expect = 4e-04
Identities = 58/230 (25%), Positives = 74/230 (32%), Gaps = 44/230 (19%)
Query: 46 GGSGTRQLQQAAATREGEEGEAGGL-SDQPGVMRTQGRTVGVAALHARFRASQRAGRHPV 104
GGSG Q R G G+ G +PG + + R +A+ A P
Sbjct: 304 GGSGWGSPQ-----RNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA 358
Query: 105 EAELGPAQRAVQQEQRARARAPG----RVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRA 160
+ P+ R+ Q RA G R R R +S PRR GR+RP R
Sbjct: 359 RGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRG 418
Query: 161 VHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPH---- 216
SL SG G G G + G E H
Sbjct: 419 SSRSLSRARSSSDSGSGRGAPGP-----------------------GPEPGSERGHGGHG 455
Query: 217 -HAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDPPFAGPSAW 265
A + PPRA+ P G G R P EG+ P P +W
Sbjct: 456 KRAKERPPRARPASTSPSPGAHGRRGGP------EGKSSSRSPGPHPRSW 499
Score = 29.6 bits (65), Expect = 3.8
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 33 AGGPEQRG---PRLRLGGSGTRQLQQAAATREGEEGE-AGGLSDQPGVMRTQGRTVGVAA 88
A P +RG PR +R L +A ++ + G A G +PG R G
Sbjct: 400 ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGG------ 453
Query: 89 LHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRR 147
H + RA +R R A P+ A + ++ R PG PR SR P R
Sbjct: 454 -HGK-RAKERPPRAR-PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSR 509
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 42.4 bits (98), Expect = 6e-04
Identities = 72/248 (29%), Positives = 93/248 (37%), Gaps = 37/248 (14%)
Query: 21 QALGA--VVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 363 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 416
Query: 79 TQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H + Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 417 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 472
Query: 139 QSRPPLPRRH-------------GRQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGE 180
+ R L R + P +LR +A + G GE +
Sbjct: 473 ERREGLLARERARLFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERD 532
Query: 181 DGAEGSHSLDE---CPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ 237
G H L +RQ R+ + Q G E QH + RR P R +
Sbjct: 533 AGLGRPHQLIHDRLGQGARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREER 589
Query: 238 -GSRLLPD 244
GSRL P+
Sbjct: 590 AGSRLAPE 597
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 42.4 bits (98), Expect = 6e-04
Identities = 72/248 (29%), Positives = 93/248 (37%), Gaps = 37/248 (14%)
Query: 21 QALGA--VVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 220 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 273
Query: 79 TQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H + Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 274 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 329
Query: 139 QSRPPLPRRH-------------GRQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGE 180
+ R L R + P +LR +A + G GE +
Sbjct: 330 ERREGLLARERARLFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERD 389
Query: 181 DGAEGSHSLDE---CPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ 237
G H L +RQ R+ + Q G E QH + RR P R +
Sbjct: 390 AGLGRPHQLIHDRLGQGARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREER 446
Query: 238 -GSRLLPD 244
GSRL P+
Sbjct: 447 AGSRLAPE 454
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/129 (34%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 21 QALGA--VVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 220 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 273
Query: 79 TQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H + Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 274 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 329
Query: 139 QSRPPLPRR 147
+ R L R
Sbjct: 330 ERREGLLAR 338
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 39.7 bits (91), Expect = 0.004
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 14 EQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ 73
++ ALG QALG + + G G RG R +G +G + + AA G AG + +
Sbjct: 151 QRRALGGQALGLLAQV--GIGAGHARGGRGAVGPAGQHRARLGAAVL---RGTAGAPARR 205
Query: 74 PGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGR 133
GV+ + + + R A +R V + G R V+ R R V G R
Sbjct: 206 VGVVAERAASAACSLQRQRLHARRR-----VREQRGRVAREVRGRVIGRGREVQPVVGRR 260
Query: 134 PR-LLQQSRPPLPRRHGRQRPVVLRVRAV 161
+ L++ R + RQ+PV +R AV
Sbjct: 261 HKPALRRGRARVLGLLRRQQPVGVRHAAV 289
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 39.7 bits (91), Expect = 0.004
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 14 EQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ 73
++ ALG QALG + + G G RG R +G +G + + AA G AG + +
Sbjct: 151 QRRALGGQALGLLAQV--GIGAGHARGGRGAVGPAGQHRARLGAAVL---RGTAGAPARR 205
Query: 74 PGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGR 133
GV+ + + + R A +R V + G R V+ R R V G R
Sbjct: 206 VGVVAERAASAACSLQRQRLHARRR-----VREQRGRVAREVRGRVIGRGREVQPVVGRR 260
Query: 134 PR-LLQQSRPPLPRRHGRQRPVVLRVRAV 161
+ L++ R + RQ+PV +R AV
Sbjct: 261 HKPALRRGRARVLGLLRRQQPVGVRHAAV 289
>gi|239752728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 38.5 bits (88), Expect = 0.008
Identities = 48/152 (31%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 11 GQLEQAALGQQA-LGAVVDILQGA-----GGP------EQRGPRLRLGGSGTRQLQQAAA 58
GQ LG L ++V++ QG G P E P LRLG LQ+ +
Sbjct: 94 GQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRLG------LQEVSQ 147
Query: 59 TREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQR--AVQ 116
EGE GE G +D+ G QG V +H + Q ++ ++GP V
Sbjct: 148 GTEGEVGERGKDNDEEG----QGVWVS-PEVHGLHKEGQPQQQYQGRQQVGPDIHGLVVL 202
Query: 117 QEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 148
EQRA APG + RP R P RRH
Sbjct: 203 LEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo
sapiens]
Length = 246
Score = 38.5 bits (88), Expect = 0.008
Identities = 48/152 (31%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 11 GQLEQAALGQQA-LGAVVDILQGA-----GGP------EQRGPRLRLGGSGTRQLQQAAA 58
GQ LG L ++V++ QG G P E P LRLG LQ+ +
Sbjct: 94 GQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRLG------LQEVSQ 147
Query: 59 TREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQR--AVQ 116
EGE GE G +D+ G QG V +H + Q ++ ++GP V
Sbjct: 148 GTEGEVGERGKDNDEEG----QGVWVS-PEVHGLHKEGQPQQQYQGRQQVGPDIHGLVVL 202
Query: 117 QEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 148
EQRA APG + RP R P RRH
Sbjct: 203 LEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.011
Identities = 62/255 (24%), Positives = 90/255 (35%), Gaps = 62/255 (24%)
Query: 16 AALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGT-------RQLQQAAATREGEEGEAG 68
++ QQ GA+ G GGP G GG+ QL + ++ G +G G
Sbjct: 264 SSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 69 GLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGR 128
G D G + G G A + ASQ G A A QQ +PG
Sbjct: 314 G--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS 366
Query: 129 VPGGRPRLLQQSRPPLPR-RHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
GG L + +P P + G+ RP G +
Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPY-------------------------GGTNPY 401
Query: 188 SLDECPPS--RQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLP-- 243
S + PPS +Q P P+G QT ++P Q R + GL ++ +P
Sbjct: 402 SQQQGPPSGPQQGHGYPGQPYGSQT-------PQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 244 -DLLPTGEGRPGEDP 257
P+G G+ G+ P
Sbjct: 455 GQQGPSGYGQQGQTP 469
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.011
Identities = 62/255 (24%), Positives = 90/255 (35%), Gaps = 62/255 (24%)
Query: 16 AALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGT-------RQLQQAAATREGEEGEAG 68
++ QQ GA+ G GGP G GG+ QL + ++ G +G G
Sbjct: 264 SSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 69 GLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGR 128
G D G + G G A + ASQ G A A QQ +PG
Sbjct: 314 G--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS 366
Query: 129 VPGGRPRLLQQSRPPLPR-RHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
GG L + +P P + G+ RP G +
Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPY-------------------------GGTNPY 401
Query: 188 SLDECPPS--RQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLP-- 243
S + PPS +Q P P+G QT ++P Q R + GL ++ +P
Sbjct: 402 SQQQGPPSGPQQGHGYPGQPYGSQT-------PQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 244 -DLLPTGEGRPGEDP 257
P+G G+ G+ P
Sbjct: 455 GQQGPSGYGQQGQTP 469
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 38.1 bits (87), Expect = 0.011
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 81 GRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQS 140
G V +A L R++ QR EL QR E+ +R+P R GRPR + S
Sbjct: 1410 GMRVRLAELQRRYKEKQR--------ELARLQRKHDHERDESSRSPARRGPGRPRKRKHS 1461
Query: 141 ------RP--PLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDEC 192
RP PLPR G+ +V+AV SL + L L G G + A+ L+
Sbjct: 1462 SSLPAPRPTGPLPRSDGK------KVKAVRTSLGL--LCAELRGGSGGEPAKKRSKLERS 1513
Query: 193 P----PSRQVRRQPHIPFGFQTGVEP--PHHAAQHPPRAQTRRL 230
+ V + Q G+ P H AQ P+ +++ L
Sbjct: 1514 VYAGLQTASVEKAQCKKSSCQGGLAPSVAHRVAQLKPKVKSKGL 1557
Score = 28.5 bits (62), Expect = 8.5
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 7/123 (5%)
Query: 150 RQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLD-ECPPSRQVRRQPHIPFG- 207
RQ+ V R A + + G P+ +G G +H+LD E R +
Sbjct: 711 RQKDTVSRSEAAYGT-NTARQGRAAPAFKGGGGPRSTHALDLEAEEERTRLCDDRLGLAS 769
Query: 208 ----FQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDPPFAGPS 263
Q + A HPP + L P +Q +L D P P P PS
Sbjct: 770 RELLLQDSKDRVEFARIHPPSSCPGDLAPHLMMQSGQLGGDPAPHTHPHPPWLPRTRSPS 829
Query: 264 AWL 266
W+
Sbjct: 830 LWM 832
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 36.6 bits (83), Expect = 0.031
Identities = 51/169 (30%), Positives = 63/169 (37%), Gaps = 24/169 (14%)
Query: 10 LGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGG 69
LG + QQ L V D L G GGP++ P S + LQ ++ E+
Sbjct: 471 LGSPQDRVSAQQQLWMVEDTLAGLGGPQKPPPHTE-PDSPSPVLQGEESSERESLPESLE 529
Query: 70 LSDQPGVMRTQGRTVG----VAALHARF------RASQRAGRHPVEAELG-------PAQ 112
LS GR G +A+ H RAS GRH +LG P
Sbjct: 530 LSSPRSPETDWGRPPGGDKDLASPHLGLGSPRVSRASSPEGRHLPSPQLGTKAPVARPRM 589
Query: 113 RAVQQEQRARARAPGRVPGGR---PRLLQQSRPPLPRRHG---RQRPVV 155
A +Q +R R P R PRLL R P R QRPVV
Sbjct: 590 SAQEQLERMRRNQECGRPFPRPTSPRLLTLGRTLSPARRQPDVEQRPVV 638
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 36.2 bits (82), Expect = 0.041
Identities = 48/182 (26%), Positives = 60/182 (32%), Gaps = 27/182 (14%)
Query: 36 PEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ-PGVMRTQGRTVGVAALHARFR 94
P + P L+L G T Q A +G+ A S PG R + R G
Sbjct: 716 PCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPG------ 769
Query: 95 ASQRAGRHPVEAELGPAQRAVQQEQRARA-RAPGRVPGGRPRLLQQSRPPLPRRHGRQRP 153
G GP +RA + R R + GGR RL R + R GR+R
Sbjct: 770 ----PGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRR--VRRESGRRRA 823
Query: 154 VVLRVRAVHPSLQVCHLGEG-------------LPSGEGEDGAEGSHSLDECPPSRQVRR 200
A+ + GE LPS A GS L PSR R
Sbjct: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
Query: 201 QP 202
P
Sbjct: 884 GP 885
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 35.8 bits (81), Expect = 0.053
Identities = 51/179 (28%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 36 PEQRG--PRLRLGGSGTR--QLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
P +RG + +G SG +Q + TR G +GE QPG + +QGR + L A
Sbjct: 1954 PLERGHSTEIPVGRSGALAVDVQMQSITRRGPDGEP-----QPG-LESQGRAASMPRLAA 2007
Query: 92 RFRASQRAGRHPVEAELGPAQRAVQQ-EQRARARAPGRVPGGRPRLLQQSRPPLPRRHGR 150
+ PV + P +R++ QR R RP Q S R R
Sbjct: 2008 ETQ--------PV-TDASPMKRSISTLAQRPRGTHLCSTTPDRPPPSQASSHHHHHRCHR 2058
Query: 151 QRPVVLRVRAVHPSLQV-------CHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQP 202
+R R PSL +G GLP GEG G + Q RRQP
Sbjct: 2059 RRDRKQRSLEKGPSLSADMDGAPSSAVGPGLPPGEGPTGCRRERERRQERGRSQERRQP 2117
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 35.8 bits (81), Expect = 0.053
Identities = 74/323 (22%), Positives = 105/323 (32%), Gaps = 56/323 (17%)
Query: 41 PRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRA----- 95
P +L G G A + ++G+AG P R + T G A H A
Sbjct: 8 PPDKLEGGGGPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEFAPPPTP 67
Query: 96 --SQRAGRHPVEAELGPAQRAVQQEQ-----------RARARAPGRVP-------GGRPR 135
+P E + G + V R + G+VP GG P+
Sbjct: 68 MVDHLVASNPFEDDFGAPKVGVAAPPFLGSPVPFGGFRVQGGMAGQVPPGYSTGGGGGPQ 127
Query: 136 LLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSL----DE 191
L++ PP P + P+ + G G P + + +
Sbjct: 128 PLRRQPPPFPPN------------PMGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNF 175
Query: 192 CPPSRQVRRQPHIPFG--FQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRL------LP 243
PPS Q+ P FG + P A PP R P S L LP
Sbjct: 176 SPPSGQMMPGPVGGFGPMISPTMGQPPRAELGPPSLSQRFAQPGAPFGPSPLQRPGQGLP 235
Query: 244 DLLPTGEGRPGEDPPFAGPSAW-----LHVPLFWSLLERPRPILRLAYLEGRR--FPWNA 296
L P PG DP F GP L+ P + + P A + G + FP N+
Sbjct: 236 SLPPNTSPFPGPDPGFPGPGGEDGGKPLNPPASTAFPQEPHSGSPAAAVNGNQPSFPPNS 295
Query: 297 GLRPGSAARAGAWVEEKRSGEGS 319
R G A + ++G GS
Sbjct: 296 SGRGGGTPDANSLAPPGKAGGGS 318
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 35.8 bits (81), Expect = 0.053
Identities = 43/165 (26%), Positives = 54/165 (32%), Gaps = 33/165 (20%)
Query: 32 GAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
GA G E GP G G + + AA + EAGG G + G H
Sbjct: 32 GAAGGEAEGPE---GSEGAEEAPRGAAAVK----EAGGGGPDRG---PEAEARGTRGAHG 81
Query: 92 RFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRP-----PLPR 146
A + A P AE+ Q+ +PGR G PR Q P P +
Sbjct: 82 ETEAEEGA---PEGAEVPQGGEETSGAQQVEGASPGRGAQGEPRGEAQREPEDSAAPERQ 138
Query: 147 RHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDE 191
QRP V EG SGE D + L +
Sbjct: 139 EEAEQRPEV---------------PEGSASGEAGDSVDAEGPLGD 168
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 35.4 bits (80), Expect = 0.070
Identities = 54/183 (29%), Positives = 66/183 (36%), Gaps = 20/183 (10%)
Query: 8 AVLGQLEQAALGQQALG---AVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEE 64
AVL Q +A + A G A L GA R R+R G AAA R+G
Sbjct: 814 AVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA- 872
Query: 65 GEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARAR 124
G GG G G G A L RA R RH L PA A + A+
Sbjct: 873 GAGGG-----GRRVRHGHGHGAAVLQ---RAPCRQQRH-----LAPAAAAAAAQGVRAAQ 919
Query: 125 APGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAE 184
PG + + RP R R+R V HP+ LG G+ GA
Sbjct: 920 GRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAA--LGRRRGGGQAV-GAR 976
Query: 185 GSH 187
+H
Sbjct: 977 AAH 979
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 35.4 bits (80), Expect = 0.070
Identities = 54/183 (29%), Positives = 66/183 (36%), Gaps = 20/183 (10%)
Query: 8 AVLGQLEQAALGQQALG---AVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEE 64
AVL Q +A + A G A L GA R R+R G AAA R+G
Sbjct: 814 AVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA- 872
Query: 65 GEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARAR 124
G GG G G G A L RA R RH L PA A + A+
Sbjct: 873 GAGGG-----GRRVRHGHGHGAAVLQ---RAPCRQQRH-----LAPAAAAAAAQGVRAAQ 919
Query: 125 APGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAE 184
PG + + RP R R+R V HP+ LG G+ GA
Sbjct: 920 GRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAA--LGRRRGGGQAV-GAR 976
Query: 185 GSH 187
+H
Sbjct: 977 AAH 979
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.4 bits (80), Expect = 0.070
Identities = 51/218 (23%), Positives = 80/218 (36%), Gaps = 23/218 (10%)
Query: 34 GGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEA---GGLSDQPGVMRTQGRTVGVAALH 90
G R P+ R S R + + R G G + R + R+ H
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563
Query: 91 ARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAP------GRVPGGRPRLLQQSRPPL 144
+R A++ R A G ++ +R+R+R P R P R R +SR P
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGR--SRSRTPA 621
Query: 145 PRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHI 204
RR + PV R R+ P+ + P+ G + P+R+ R +
Sbjct: 622 RRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSR--------TPARRGRSRSRT 673
Query: 205 PFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLL 242
P ++G A+ R ++R P RG SR L
Sbjct: 674 P-ARRSGRSRSRTPAR---RGRSRSRTPRRGRSRSRSL 707
Score = 29.3 bits (64), Expect = 5.0
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 32/160 (20%)
Query: 78 RTQGRTVGVAALHARFRAS------QRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPG 131
R++ RT + +R R S R+ PV ++ + +R+R+R P +
Sbjct: 1969 RSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI-- 2026
Query: 132 GRPRLLQQSRPPL-PRRHGRQR-PVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSL 189
R +SR PL PR+ R R P+ +R R+ + + A G SL
Sbjct: 2027 ---RRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRT---------------ARGKRSL 2068
Query: 190 DECPPSRQVRRQPHIPFGFQTGVEPP----HHAAQHPPRA 225
PP+ + R PP H ++ PP A
Sbjct: 2069 TRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVA 2108
Score = 28.5 bits (62), Expect = 8.5
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 36 PEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTV----GVAALHA 91
P+ RG L+ S +R+ + R G + S + R++ R G + H+
Sbjct: 1765 PKPRG--LQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHS 1822
Query: 92 RFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGRQ 151
R A Q + R G ++ +R+R+R P R ++ P RR +
Sbjct: 1823 RSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTS---PAPWKRSRSRASPATHRRSRSR 1879
Query: 152 RPVVLRVRA 160
P++ R R+
Sbjct: 1880 TPLISRRRS 1888
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 34.3 bits (77), Expect = 0.16
Identities = 50/190 (26%), Positives = 67/190 (35%), Gaps = 30/190 (15%)
Query: 123 ARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDG 182
A PG PG R L + PP P RH Q P + R + P+ LG +G +
Sbjct: 272 APCPGPPPGSRANPLVKKEPPAPHRHTPQPPPP-QPRGLLPTHVPASLGAF--AGHSQAA 328
Query: 183 AEGSHSLDECPPS-----RQVRRQPHIPFGFQTGVEPPHHAAQH-PPRAQTRRLFPLRGL 236
A G H L + + V PH P PH + H R+Q +
Sbjct: 329 ANGLHGLSRSSSAPLGLGKHVSLSPHGP--------GPHLSTSHLALRSQAQHQLHAAMF 380
Query: 237 QGSRLLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNA 296
LP PP A P++ L +P + E R L +L A
Sbjct: 381 AAPPTLP-------------PPPALPASSLVLPGHPADHELLRQELNTRFLVQSAERPGA 427
Query: 297 GLRPGSAARA 306
L PG+ RA
Sbjct: 428 SLGPGALLRA 437
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 34.3 bits (77), Expect = 0.16
Identities = 54/181 (29%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 14 EQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAG--GLS 71
E LG+ L V + G P GP R+G G + + TR GE+GE G G
Sbjct: 552 EPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTR-GEKGERGLDGFP 610
Query: 72 DQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPA------QRAVQQE-QRARAR 124
+PG QGR S AG + ++GPA VQQE +
Sbjct: 611 GKPGDTGQQGRP----------GPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQG 660
Query: 125 APGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAE 184
APG P G Q P P G + P+ R P LQ GL +G+ G
Sbjct: 661 APG--PRG-----HQGAPGPP---GARGPIGPEGRDGPPGLQ------GLRGKKGDMGPP 704
Query: 185 G 185
G
Sbjct: 705 G 705
Score = 30.8 bits (68), Expect = 1.7
Identities = 43/156 (27%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
Query: 34 GGPEQRGPRLRLGGSGTRQL--QQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
G P +RG G G R +Q A R GE+GEA GL PG +G G
Sbjct: 768 GEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEA-GLPGAPGFPGVRGEK-GDQGEKG 825
Query: 92 RFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGRQ 151
G + E GPA + R+PG + ++ P LP G Q
Sbjct: 826 ELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQ 885
Query: 152 -RPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGS 186
RP L + G P +G++GA G+
Sbjct: 886 GRPGELGPQG----------PTGPPGAKGQEGAHGA 911
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.20
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 20/117 (17%)
Query: 35 GPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG-VAALHARF 93
GPE R R LGG R A TR G +PG T R G + R
Sbjct: 168 GPESRAARQGLGGRSAR-----ARTRRGPHRTR---RPEPGPHHTGARQAGPLPGTRGRT 219
Query: 94 RASQRAGRHPVEAELGPAQ--RAVQQEQRARARAPGRVPGGRPRLLQQ----SRPPL 144
RA+ A GPA+ R A AR G P GR RL +RPPL
Sbjct: 220 RAAGTG-----SAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL 271
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.20
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 20/117 (17%)
Query: 35 GPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG-VAALHARF 93
GPE R R LGG R A TR G +PG T R G + R
Sbjct: 168 GPESRAARQGLGGRSAR-----ARTRRGPHRTR---RPEPGPHHTGARQAGPLPGTRGRT 219
Query: 94 RASQRAGRHPVEAELGPAQ--RAVQQEQRARARAPGRVPGGRPRLLQQ----SRPPL 144
RA+ A GPA+ R A AR G P GR RL +RPPL
Sbjct: 220 RAAGTG-----SAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL 271
>gi|239748653 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.9 bits (76), Expect = 0.20
Identities = 79/285 (27%), Positives = 104/285 (36%), Gaps = 68/285 (23%)
Query: 65 GEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARAR 124
G+ GGL+ Q G + Q LH R+ R R + ++R ++E A
Sbjct: 26 GQDGGLARQQGAIDAQ-------LLH---RSRSRCSREAL------SRRKRRREPGEGAA 69
Query: 125 APGRVPGGRPR----LLQQSRPP--LPRRHGRQRPVVLRVR----AVHPSLQ-------- 166
APG VP G R LL + P L R + P LR+R PS +
Sbjct: 70 APGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSFKDPESRFME 129
Query: 167 -----VCHLGEGLPSGEGEDGAEGSHSLD------ECPPSRQVRRQPHIPFGFQTGVEPP 215
+GEG P+G G+ G+ L E +R RR P G QTG +
Sbjct: 130 PWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQA- 188
Query: 216 HHA------AQHPPRAQTRRLFPL-----RGLQGSRLLPDLLPTGEGRPGEDPPFAGPSA 264
HA + P + R L PL RG + RL G R G
Sbjct: 189 -HAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRL-------GSLRRGLRLGRQRVQQ 240
Query: 265 WLHVPLFWSLLERPRPILRLAYLEG-RRFPWNAGLRPGSAARAGA 308
+P+ WS PR + L G R P G GS R GA
Sbjct: 241 RGGLPVQWS--RGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGA 283
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.20
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 20/117 (17%)
Query: 35 GPEQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG-VAALHARF 93
GPE R R LGG R A TR G +PG T R G + R
Sbjct: 168 GPESRAARQGLGGRSAR-----ARTRRGPHRTR---RPEPGPHHTGARQAGPLPGTRGRT 219
Query: 94 RASQRAGRHPVEAELGPAQ--RAVQQEQRARARAPGRVPGGRPRLLQQ----SRPPL 144
RA+ A GPA+ R A AR G P GR RL +RPPL
Sbjct: 220 RAAGTG-----SAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL 271
>gi|239742678 PREDICTED: hypothetical protein XP_002342581 [Homo
sapiens]
Length = 295
Score = 33.9 bits (76), Expect = 0.20
Identities = 79/285 (27%), Positives = 104/285 (36%), Gaps = 68/285 (23%)
Query: 65 GEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARAR 124
G+ GGL+ Q G + Q LH R+ R R + ++R ++E A
Sbjct: 26 GQDGGLARQQGAIDAQ-------LLH---RSRSRCSREAL------SRRKRRREPGEGAA 69
Query: 125 APGRVPGGRPR----LLQQSRPP--LPRRHGRQRPVVLRVR----AVHPSLQ-------- 166
APG VP G R LL + P L R + P LR+R PS +
Sbjct: 70 APGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSFKDPESRFME 129
Query: 167 -----VCHLGEGLPSGEGEDGAEGSHSLD------ECPPSRQVRRQPHIPFGFQTGVEPP 215
+GEG P+G G+ G+ L E +R RR P G QTG +
Sbjct: 130 PWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQA- 188
Query: 216 HHA------AQHPPRAQTRRLFPL-----RGLQGSRLLPDLLPTGEGRPGEDPPFAGPSA 264
HA + P + R L PL RG + RL G R G
Sbjct: 189 -HAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRL-------GSLRRGLRLGRQRVQQ 240
Query: 265 WLHVPLFWSLLERPRPILRLAYLEG-RRFPWNAGLRPGSAARAGA 308
+P+ WS PR + L G R P G GS R GA
Sbjct: 241 RGGLPVQWS--RGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGA 283
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 33.9 bits (76), Expect = 0.20
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 169 HLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEP--PHHAAQHPPRAQ 226
H G P GA+G +L+E P +P++ + F GV P P H QHPP+
Sbjct: 184 HQLSGTPYEGPSFGADGPTALEEMP-------RPYVDYLFP-GVGPHGPGHQHQHPPKGY 235
Query: 227 TRRL------FPLRGLQGSRLLPDLLPTGE 250
+ FPL+G R P LL GE
Sbjct: 236 GASVEAAGAHFPLQGAHYGR--PHLLVPGE 263
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,106,849
Number of Sequences: 37866
Number of extensions: 973453
Number of successful extensions: 3868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 3714
Number of HSP's gapped (non-prelim): 349
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.