Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239756560
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 393 e-110
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 391 e-109
gi|239745536 PREDICTED: hypothetical protein [Homo sapiens] 92 2e-19
gi|239751069 PREDICTED: hypothetical protein [Homo sapiens] 92 3e-19
gi|239745546 PREDICTED: hypothetical protein [Homo sapiens] 91 5e-19
gi|47132519 Ras association and pleckstrin homology domains 1 is... 40 0.001
gi|126157477 hypothetical protein LOC79680 [Homo sapiens] 36 0.015
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 36 0.020
gi|157168329 formin 1 [Homo sapiens] 35 0.034
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 35 0.034
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 35 0.044
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 35 0.044
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 35 0.044
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 34 0.058
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 34 0.058
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 34 0.076
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 34 0.076
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 34 0.076
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.076
gi|221139926 NHS-like 1 [Homo sapiens] 33 0.13
gi|119943102 CREB binding protein isoform b [Homo sapiens] 33 0.17
gi|119943104 CREB binding protein isoform a [Homo sapiens] 33 0.17
gi|18079216 CASK interacting protein 1 [Homo sapiens] 32 0.22
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.22
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.22
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.22
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 32 0.22
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 32 0.22
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 32 0.22
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.29
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 393 bits (1010), Expect = e-110
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
Query: 61 HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLS 120
HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLS
Sbjct: 61 HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLS 120
Query: 121 PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV 178
PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV
Sbjct: 121 PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV 178
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 391 bits (1005), Expect = e-109
Identities = 177/178 (99%), Positives = 177/178 (99%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
Query: 61 HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLS 120
HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRG PVPGPLS
Sbjct: 61 HPCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGAPVPGPLS 120
Query: 121 PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV 178
PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV
Sbjct: 121 PRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGPMLV 178
>gi|239745536 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 92.0 bits (227), Expect = 2e-19
Identities = 67/171 (39%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS VC +C V C V V
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS--VCVHVCVLVQTQVCGCASVCV-- 56
Query: 61 HPCTTGSRSLPEPPSPLALSQP----ATHQCPQLHAPRC------SVHQCVLDQEKTKTS 110
C+ +P P +P P +H + AP C S+ C+ ++ +
Sbjct: 57 --CSI----IPAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRL- 109
Query: 111 RGTPVPGPLSPRPLCCV-TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPG 160
G P+ LS C V G P P + G P GP G
Sbjct: 110 -GGPLYLVLSAPAHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
>gi|239751069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 91.7 bits (226), Expect = 3e-19
Identities = 67/171 (39%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS VC +C V C V V
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS--VCVHVCVLVQTQVCGCASVCV-- 56
Query: 61 HPCTTGSRSLPEPPSPLALSQP----ATHQCPQLHAPRC------SVHQCVLDQEKTKTS 110
C+ +P P +P P +H + AP C S+ C+ ++ +
Sbjct: 57 --CSI----IPAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRL- 109
Query: 111 RGTPVPGPLSPRPLCCV-TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPG 160
G P+ LS C V G P P G P GP G
Sbjct: 110 -GGPLYLVLSAPAHCAVLLAWGISCPFHNMLFPPGGSGLRLGVGSPEGPLG 159
>gi|239745546 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 90.9 bits (224), Expect = 5e-19
Identities = 67/171 (39%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS VC +C V C V V
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS--VCVHVCVLVQTQVCGCASVCV-- 56
Query: 61 HPCTTGSRSLPEPPSPLALSQP----ATHQCPQLHAPRC------SVHQCVLDQEKTKTS 110
C+ +P P +P P +H + AP C S+ C+ ++ +
Sbjct: 57 --CSI----IPAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRL- 109
Query: 111 RGTPVPGPLSPRPLCCV-TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPG 160
G P+ LS C V G P P G P GP G
Sbjct: 110 -GGPLYLVLSAPAHCAVLLAWGISCPFHNMLFPPGGSGLRLGVGSPGGPLG 159
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 64 TTGSRSLPEPPSPLALSQPA---THQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLS 120
T + P PP P A QPA ++ P P V L ++++ ++ P P PLS
Sbjct: 799 TQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAK--PPPSPLS 856
Query: 121 PRPLCCVTCMGDFLPLP-QYAVSPRSLRPEARSGVPRGPPGV------SPGSTPCP 169
P P F P P A+ + L+P + P+ PP V P S P P
Sbjct: 857 PVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVP 912
Score = 27.7 bits (60), Expect = 5.4
Identities = 29/99 (29%), Positives = 36/99 (36%), Gaps = 18/99 (18%)
Query: 71 PEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVTCM 130
P PP+P A+ P AP+ V + K + S PVP P P P
Sbjct: 870 PPPPTPPAMESQPLKPVPANVAPQSP--PAVKAKPKWQPS-SIPVPSPDFPPP------- 919
Query: 131 GDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCP 169
P V P P S VP PP P ++P P
Sbjct: 920 ----PPESSLVFP----PPPPSPVPAPPPPPPPTASPTP 950
>gi|126157477 hypothetical protein LOC79680 [Homo sapiens]
Length = 364
Score = 36.2 bits (82), Expect = 0.015
Identities = 32/99 (32%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 80 SQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVTCMGDFLPLPQY 139
S PA P + + +Q+ TK S PGP P L TC P
Sbjct: 233 SLPAAMATPAVSGSNSVSRSALFEQQLTKES----TPGPKEPPVLPSSTCSSKPGP---- 284
Query: 140 AVSPRSLRPE--ARSGVPRGPPGVSP-GSTPCPIHPVGP 175
V P S +PE A + VPR +P P P HP GP
Sbjct: 285 -VEPASSQPEEAAPTPVPRLSESANPPAQRPDPAHPGGP 322
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.8 bits (81), Expect = 0.020
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 72 EPPSPLALSQPATHQCP--QLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPR---PLCC 126
+PP P A P T Q P Q + + V ++EK +G P+P P + P
Sbjct: 3209 QPPPPPAAQPPPTPQLPLQQQQQRKDKDSEKVKEKEKAHKGKGEPLPVPKKEKGEAPTAT 3268
Query: 127 VTCMGDFLPLPQYAVSPRSLR 147
+ LP +YAV P L+
Sbjct: 3269 AATISAPLPTMEYAVDPAQLQ 3289
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 35.0 bits (79), Expect = 0.034
Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 26/160 (16%)
Query: 38 VCARMCAGADPGVWVCLCVRV----FHHPCTTGSRS------LPEPPSPLALSQ---PAT 84
VC P + +CV+ F PC + S++ +P+ + +LSQ P
Sbjct: 564 VCISTDDDCPPKTFRNVCVQTDRETFLKPCESESKTTRSNQLVPKKLNISSLSQLSPPND 623
Query: 85 HQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGP---------LSPRPLCCVTCMGDFLP 135
H+ +HA + +Q+K +P P LSP P G P
Sbjct: 624 HK--DIHAALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGP--P 679
Query: 136 LPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGP 175
LP P L P + +G P PP ++P P +P GP
Sbjct: 680 LPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP 719
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 35.0 bits (79), Expect = 0.034
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 109 TSRGTPVPGPL--SPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGST 166
T G PVP P+ P P C G F P P +RP G+ PGV PG
Sbjct: 1773 TPMGGPVPPPIRYGPPPQLC----GPFGPRPLPPPFGPGMRPPL--GLREFAPGVPPGRR 1826
Query: 167 PCPIHPVG 174
P+HP G
Sbjct: 1827 DLPLHPRG 1834
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 34.7 bits (78), Expect = 0.044
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 66 GSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLC 125
G R +PP P + PA P R ++ SRG+ GP P
Sbjct: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS---GPAQPA--- 244
Query: 126 CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHP 172
LPLP A SP PE R G PG + G P P P
Sbjct: 245 -------HLPLPGPAHSPAPPAPELREG---RAPGSTAGRRPRPREP 281
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 34.7 bits (78), Expect = 0.044
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 66 GSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLC 125
G R +PP P + PA P R ++ SRG+ GP P
Sbjct: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS---GPAQPA--- 244
Query: 126 CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHP 172
LPLP A SP PE R G PG + G P P P
Sbjct: 245 -------HLPLPGPAHSPAPPAPELREG---RAPGSTAGRRPRPREP 281
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 34.7 bits (78), Expect = 0.044
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 66 GSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLC 125
G R +PP P + PA P R ++ SRG+ GP P
Sbjct: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS---GPAQPA--- 244
Query: 126 CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHP 172
LPLP A SP PE R G PG + G P P P
Sbjct: 245 -------HLPLPGPAHSPAPPAPELREG---RAPGSTAGRRPRPREP 281
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 34.3 bits (77), Expect = 0.058
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 63 CTTGSRSLPEPPSPLALSQPATHQCPQLH---APRCSVHQCVLDQEKTKTSRGTPVPGPL 119
C S + P P S + P T P LH CS VLD + R GP
Sbjct: 651 CRAASLAPPRPASATSAGSP-TSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPR 709
Query: 120 SPRPLCCVTCMGDFLPLPQYAVSPR---SLRPEARSGVPRGP 158
S RP + + P A SPR S P++ G P P
Sbjct: 710 SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRP 751
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 34.3 bits (77), Expect = 0.058
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 63 CTTGSRSLPEPPSPLALSQPATHQCPQLH---APRCSVHQCVLDQEKTKTSRGTPVPGPL 119
C S + P P S + P T P LH CS VLD + R GP
Sbjct: 651 CRAASLAPPRPASATSAGSP-TSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPR 709
Query: 120 SPRPLCCVTCMGDFLPLPQYAVSPR---SLRPEARSGVPRGP 158
S RP + + P A SPR S P++ G P P
Sbjct: 710 SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRP 751
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 33.9 bits (76), Expect = 0.076
Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 20/114 (17%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPG-----PLSPRP 123
+LP PP+ LS +TH P H P ++ Q + S PG L P P
Sbjct: 408 NLPPPPALKPLSSLSTHHPPSAHPPPLQ----LMPQSQPLPSSPAQPPGLTQSQNLPPPP 463
Query: 124 LC-CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTP-CPIHPVGP 175
T + P P +A P VP GPP ++P + P P GP
Sbjct: 464 ASHPPTGLHQVAPQPPFAQHP---------FVPGGPPPITPPTCPSTSTPPAGP 508
Score = 33.5 bits (75), Expect = 0.099
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 68 RSLPEPPSPLALSQ---PATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPL 124
R P PP+PLA+ P T PQL AP+ H L + S +P P + +PL
Sbjct: 360 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL-SGPSPFSMNANLPPPPALKPL 418
Query: 125 CCVTCMGDFLPLPQYAVSPRSLRPEAR--SGVPRGPPGVS--------PGS-TPCPIHPV 173
++ P P L P+++ P PPG++ P S P +H V
Sbjct: 419 SSLSTHHP----PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 474
Query: 174 GP 175
P
Sbjct: 475 AP 476
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 33.9 bits (76), Expect = 0.076
Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 20/114 (17%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPG-----PLSPRP 123
+LP PP+ LS +TH P H P ++ Q + S PG L P P
Sbjct: 962 NLPPPPALKPLSSLSTHHPPSAHPPPLQ----LMPQSQPLPSSPAQPPGLTQSQNLPPPP 1017
Query: 124 LC-CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTP-CPIHPVGP 175
T + P P +A P VP GPP ++P + P P GP
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHP---------FVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 33.5 bits (75), Expect = 0.099
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 68 RSLPEPPSPLALSQ---PATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPL 124
R P PP+PLA+ P T PQL AP+ H L + S +P P + +PL
Sbjct: 914 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL-SGPSPFSMNANLPPPPALKPL 972
Query: 125 CCVTCMGDFLPLPQYAVSPRSLRPEAR--SGVPRGPPGVS--------PGS-TPCPIHPV 173
++ P P L P+++ P PPG++ P S P +H V
Sbjct: 973 SSLSTHHP----PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 174 GP 175
P
Sbjct: 1029 AP 1030
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 33.9 bits (76), Expect = 0.076
Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 20/114 (17%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPG-----PLSPRP 123
+LP PP+ LS +TH P H P ++ Q + S PG L P P
Sbjct: 962 NLPPPPALKPLSSLSTHHPPSAHPPPLQ----LMPQSQPLPSSPAQPPGLTQSQNLPPPP 1017
Query: 124 LC-CVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTP-CPIHPVGP 175
T + P P +A P VP GPP ++P + P P GP
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHP---------FVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 33.5 bits (75), Expect = 0.099
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 68 RSLPEPPSPLALSQ---PATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPL 124
R P PP+PLA+ P T PQL AP+ H L + S +P P + +PL
Sbjct: 914 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL-SGPSPFSMNANLPPPPALKPL 972
Query: 125 CCVTCMGDFLPLPQYAVSPRSLRPEAR--SGVPRGPPGVS--------PGS-TPCPIHPV 173
++ P P L P+++ P PPG++ P S P +H V
Sbjct: 973 SSLSTHHP----PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 174 GP 175
P
Sbjct: 1029 AP 1030
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.9 bits (76), Expect = 0.076
Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 62 PCTTGSRSLPEP---PSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVP-- 116
P G + P P P+P A + P+ P +P+ + K TP P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 117 GPLSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGP 175
P P G P P+ A +P ++ P + G P P STP P P
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Score = 30.0 bits (66), Expect = 1.1
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 16/118 (13%)
Query: 62 PCTTGSRSLPEPPSPL-------ALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTP 114
P T S+ P PP+ A++ P+ + P + +P+ + K + TP
Sbjct: 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATP 1419
Query: 115 VPGPLSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHP 172
V + P GD P AV+P SL+ + P+G P +P S P P
Sbjct: 1420 VTREGAATP-----SKGDLTPP---AVTPVSLKKAPATSAPKGGP-ATPSSKGDPTLP 1468
Score = 29.6 bits (65), Expect = 1.4
Identities = 27/114 (23%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Query: 62 PCTTGSRSLPEPPS---PLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPG- 117
P T + P PP+ P PAT P + T + +G P P
Sbjct: 954 PATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPA 1013
Query: 118 --PLSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCP 169
P SP+ T P A P A + +P+G P + P P
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
Score = 26.9 bits (58), Expect = 9.2
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 29/114 (25%)
Query: 62 PCTTGSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSP 121
P S S E P+P A++ P+ + P AP +GTP P++P
Sbjct: 1602 PPAVTSPSPKEAPTPPAVTPPSPEKGPATPAP-----------------KGTPTSPPVTP 1644
Query: 122 RPL-------CCVTC-MGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTP 167
L VTC MG +P + P P A V P +P STP
Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQASKGL-PAKKGPTALKEVLVAP---APESTP 1694
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 33.1 bits (74), Expect = 0.13
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 6/108 (5%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVT 128
S P PP P S P CP +P V D + +PV P P L
Sbjct: 926 SPPAPPPPPVPSPP--FPCPADRSPFLPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFC 983
Query: 129 CMGDF-LPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPVGP 175
D+ L P+ A+SP + P++ +P PP + P S P P P+ P
Sbjct: 984 SPPDWCLSPPRPALSP--ILPDSPVSLPLPPP-LLPSSEPPPAPPLDP 1028
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 32.7 bits (73), Expect = 0.17
Identities = 36/125 (28%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Query: 70 LPEPPSPLAL-------SQPATHQ-CPQLHAPRCSVHQCV---LDQEKTKTSRGTPVPGP 118
+P+PP+ + PA Q PQ P S V +T S+G VPG
Sbjct: 731 MPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQ-VPGA 789
Query: 119 LSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARS---GVP----RGPPGVSPGSTPCPIH 171
P PL + LP P SP P S G+P PPG++P P
Sbjct: 790 ALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQ 849
Query: 172 PVGPM 176
P P+
Sbjct: 850 PSTPV 854
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 32.7 bits (73), Expect = 0.17
Identities = 36/125 (28%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Query: 70 LPEPPSPLAL-------SQPATHQ-CPQLHAPRCSVHQCV---LDQEKTKTSRGTPVPGP 118
+P+PP+ + PA Q PQ P S V +T S+G VPG
Sbjct: 769 MPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQ-VPGA 827
Query: 119 LSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARS---GVP----RGPPGVSPGSTPCPIH 171
P PL + LP P SP P S G+P PPG++P P
Sbjct: 828 ALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQ 887
Query: 172 PVGPM 176
P P+
Sbjct: 888 PSTPV 892
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 32.3 bits (72), Expect = 0.22
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 114 PVPGPLSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPP--GVSPGSTPCPIH 171
P P P +P+P+ V + P A SP P A + P PP G SP P P
Sbjct: 1274 PPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGA 1333
Query: 172 P 172
P
Sbjct: 1334 P 1334
Score = 30.8 bits (68), Expect = 0.64
Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 21/120 (17%)
Query: 66 GSRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCV----------------LDQEKTKT 109
G LP PP P P L P + L T T
Sbjct: 1187 GPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPT 1246
Query: 110 SRGTPVPGPLSPRPLCCVTCMGDFLPL-PQYAVSPRSLRP-EARSGVPRGPPGVSPGSTP 167
S+ P+PGP SP G P+ P+ P + +P +A +G+P G G SP +P
Sbjct: 1247 SKKVPLPGPGSPE---VKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSP 1303
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 0.22
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVT 128
++P PP+PL ++ H P AP L Q +R PV + PL
Sbjct: 367 AVPPPPAPLQIAPGVLHPAPPPIAP-------PLVQPSPPVARAAPVCETVPVHPLPQGE 419
Query: 129 CMGDFLPLPQYAVSPRSLRPEAR---SGVPRGPPGV--SPGSTPCPIHPVGP 175
G P P + P +RP + + + P G+ +P + P P P+ P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMP 471
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 0.22
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVT 128
++P PP+PL ++ H P AP L Q +R PV + PL
Sbjct: 367 AVPPPPAPLQIAPGVLHPAPPPIAP-------PLVQPSPPVARAAPVCETVPVHPLPQGE 419
Query: 129 CMGDFLPLPQYAVSPRSLRPEAR---SGVPRGPPGV--SPGSTPCPIHPVGP 175
G P P + P +RP + + + P G+ +P + P P P+ P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMP 471
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 0.22
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVT 128
++P PP+PL ++ H P AP L Q +R PV + PL
Sbjct: 367 AVPPPPAPLQIAPGVLHPAPPPIAP-------PLVQPSPPVARAAPVCETVPVHPLPQGE 419
Query: 129 CMGDFLPLPQYAVSPRSLRPEAR---SGVPRGPPGV--SPGSTPCPIHPVGP 175
G P P + P +RP + + + P G+ +P + P P P+ P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMP 471
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 0.22
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 69 SLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRPLCCVT 128
++P PP+PL ++ H P AP L Q +R PV + PL
Sbjct: 367 AVPPPPAPLQIAPGVLHPAPPPIAP-------PLVQPSPPVARAAPVCETVPVHPLPQGE 419
Query: 129 CMGDFLPLPQYAVSPRSLRPEAR---SGVPRGPPGV--SPGSTPCPIHPVGP 175
G P P + P +RP + + + P G+ +P + P P P+ P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMP 471
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 32.3 bits (72), Expect = 0.22
Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
Query: 67 SRSLPEPPSPLALSQPATHQCPQLHAPRCSVHQCVLDQEKTKTSRG--TPVPGPLSPRPL 124
+RS + SPL+ QCP P + C Q R P P P R
Sbjct: 327 ARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSP 386
Query: 125 CCVTCMGDFLPLPQ----YAVSPRSLRPEARSGVPRGPPGVSPGSTPCP 169
+C P+PQ S +S P+ RS VP P P P P
Sbjct: 387 ASPSCPS---PVPQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPP 432
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 32.3 bits (72), Expect = 0.22
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 100 CVLDQEKTKTSRGTPVPGPLSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPP 159
C E + RG PGPL+P P C F+P P P P R P PP
Sbjct: 16 CFTPGESQRGPRGPYPPGPLAPPPPPCFPFGTGFVPPPH----PPPYGP-GRFPPPLSPP 70
Query: 160 GVSPGSTPCPIHPVGP 175
P P P GP
Sbjct: 71 YGPGRIPPSPPPPYGP 86
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/115 (30%), Positives = 42/115 (36%), Gaps = 20/115 (17%)
Query: 62 PCTTGSRSLPEPPSPLALSQ---PATHQCPQLHAPRCSVHQCVLDQEKTKTSRGTPVPGP 118
P + S SL PPSPLALS + P L A + + + TS P P
Sbjct: 392 PHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTP 451
Query: 119 LSPRPLCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHPV 173
PL L LP SL P VSP S+P IHP+
Sbjct: 452 PDSPPLQAP------LSLPASPPLQTSL-----------SPAVSPLSSPLTIHPL 489
Score = 28.1 bits (61), Expect = 4.1
Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query: 71 PEPPSPLALSQPATHQCPQLHAPRC-SVHQCVLDQEKTKTSRGTPVPGPLSP--RPLCCV 127
P PP+ LS AT P AP +VH L Q PV P SP P
Sbjct: 634 PSPPASPPLSPLAT---PSPQAPNALAVH---LLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 128 TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTPCPIHP 172
+ P A P + P P P +SP +TP P P
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPS-----PPASPPMSPSATPPPQAP 727
Score = 27.7 bits (60), Expect = 5.4
Identities = 32/104 (30%), Positives = 36/104 (34%), Gaps = 20/104 (19%)
Query: 68 RSLPEPP-SPLALSQPATHQC---PQLHAPRCSVHQCVLDQEKTKTSRGTPVPGPLSPRP 123
+ LP PP SPLA P P L AP L T P P +P
Sbjct: 604 QGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLAT--------PSPQAPNA 655
Query: 124 LCCVTCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPGVSPGSTP 167
L F P P V +A P PP VSP +TP
Sbjct: 656 LAVHLLQAPFSPPPSPPV-------QAPFSPPASPP-VSPSATP 691
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,664,060
Number of Sequences: 37866
Number of extensions: 689766
Number of successful extensions: 4633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 4240
Number of HSP's gapped (non-prelim): 663
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.