BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239756447 PREDICTED: hypothetical protein [Homo sapiens] (155 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239756447 PREDICTED: hypothetical protein [Homo sapiens] 326 6e-90 gi|239750950 PREDICTED: hypothetical protein XP_002347615 [Homo ... 326 6e-90 gi|239745356 PREDICTED: hypothetical protein XP_002343445 [Homo ... 326 6e-90 gi|113865921 hypothetical protein LOC441457 [Homo sapiens] 33 0.098 gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens] 32 0.29 gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens] 32 0.29 gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens] 32 0.29 gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 30 0.64 gi|210147475 zinc finger protein 92 homolog [Homo sapiens] 30 0.64 gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 30 0.83 gi|148806874 hypothetical protein LOC54754 [Homo sapiens] 30 0.83 gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4 gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4 gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4 gi|207452735 epiplakin 1 [Homo sapiens] 29 1.4 gi|28269707 C-type lectin domain family 14, member A [Homo sapiens] 29 1.4 gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 28 3.2 gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo ... 28 3.2 gi|76443679 proprotein convertase subtilisin/kexin type 4 [Homo ... 28 3.2 gi|239757230 PREDICTED: hypothetical protein [Homo sapiens] 28 4.1 gi|239751738 PREDICTED: hypothetical protein [Homo sapiens] 28 4.1 gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo ... 28 4.1 gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 28 4.1 gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 28 4.1 gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] 28 4.1 gi|151301175 hypothetical protein LOC58489 [Homo sapiens] 28 4.1 gi|4885327 free fatty acid receptor 1 [Homo sapiens] 27 5.4 gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 27 5.4 gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 27 5.4 gi|30039694 zinc finger protein 598 [Homo sapiens] 27 5.4 >gi|239756447 PREDICTED: hypothetical protein [Homo sapiens] Length = 155 Score = 326 bits (835), Expect = 6e-90 Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA Sbjct: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 Query: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP Sbjct: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 Query: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP Sbjct: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 >gi|239750950 PREDICTED: hypothetical protein XP_002347615 [Homo sapiens] Length = 155 Score = 326 bits (835), Expect = 6e-90 Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA Sbjct: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 Query: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP Sbjct: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 Query: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP Sbjct: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 >gi|239745356 PREDICTED: hypothetical protein XP_002343445 [Homo sapiens] Length = 155 Score = 326 bits (835), Expect = 6e-90 Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA Sbjct: 1 MELRSGAAYSAQRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAA 60 Query: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP Sbjct: 61 CSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAP 120 Query: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP Sbjct: 121 RPASLACVSDCAEGHWEKPGQDAGCTDDGDHTGLP 155 >gi|113865921 hypothetical protein LOC441457 [Homo sapiens] Length = 492 Score = 33.1 bits (74), Expect = 0.098 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 53 PAQLVLAACSGPQRWGAAFGSLCELGLCPSPHG-ASLPSTALTLTQLVLAARSSTGAYAL 111 P L P W A G+LC +CP P A+ P +T Q+V ++ G ++ Sbjct: 95 PQAQTLILTQAPLVWQAP-GTLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGGWSH 153 Query: 112 RLCTGPPAPRPASLACVSDCAEGHWEKPGQDAG 144 L PP P VS G W + G Sbjct: 154 GLPLPPPPPAAQVAPIVSPGNAGPWPQGAHGEG 186 >gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens] Length = 915 Score = 31.6 bits (70), Expect = 0.29 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94 D W + + GP +++L+ G WG C L CPS P G SL Sbjct: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448 Query: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140 TQ V+ S G LR C P + R +++ +S+ +GHW + PG Sbjct: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498 >gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens] Length = 821 Score = 31.6 bits (70), Expect = 0.29 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94 D W + + GP +++L+ G WG C L CPS P G SL Sbjct: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448 Query: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140 TQ V+ S G LR C P + R +++ +S+ +GHW + PG Sbjct: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498 >gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens] Length = 904 Score = 31.6 bits (70), Expect = 0.29 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94 D W + + GP +++L+ G WG C L CPS P G SL Sbjct: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448 Query: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140 TQ V+ S G LR C P + R +++ +S+ +GHW + PG Sbjct: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498 >gi|167614488 TBC1 domain family, member 10B [Homo sapiens] Length = 808 Score = 30.4 bits (67), Expect = 0.64 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 81 PSPHGASLPSTALT-LTQLVLAARSSTGAYALRLCTGPPAPRPASLACV 128 P+P A P+ A+T T +VL +S A +L +GP +P PA++A V Sbjct: 72 PAPAPAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESPEPAAVAGV 120 >gi|210147475 zinc finger protein 92 homolog [Homo sapiens] Length = 416 Score = 30.4 bits (67), Expect = 0.64 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 68 GAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAPRPAS 124 G AFG L + HGA P+ A T + LA STG + T PP P A+ Sbjct: 354 GKAFGRRANLFKHQAVHGARRPAKAETARR--LAGPGSTGPGSAVAATSPPRPSTAA 408 >gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens] Length = 2161 Score = 30.0 bits (66), Expect = 0.83 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 30 LDVWASWLDHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPSPHGASLP 89 LD + ++LD Q + P QL+ + + GA+ G L P P G Sbjct: 1725 LDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGRALGASGG------LRPGPSGGLRD 1778 Query: 90 STALTLTQLVLAARSSTGAYALRLCTGPP 118 T + + + G ALR C+GPP Sbjct: 1779 PVTPTSPTVSVTGAGTDGLLALRACSGPP 1807 Score = 26.9 bits (58), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 56 LVLAACSGPQRWGAAFGSLC---ELGLCPSPHGASLPSTAL 93 L L ACSGP G A G + E+ P P +SLP L Sbjct: 1798 LALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKLL 1838 >gi|148806874 hypothetical protein LOC54754 [Homo sapiens] Length = 756 Score = 30.0 bits (66), Expect = 0.83 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 2/93 (2%) Query: 53 PAQLVLAACSGPQRWGAAFGSLCELGLCPSPHG-ASLPSTALTLTQLVLAARSSTGAYAL 111 P L P W A G+LC +CP P A+ P +T Q+V ++ G ++ Sbjct: 95 PQAQTLILTQAPLVWQAP-GTLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGGWSH 153 Query: 112 RLCTGPPAPRPASLACVSDCAEGHWEKPGQDAG 144 L PP P VS W + G Sbjct: 154 GLPLPPPPPAAQVAPIVSPGNARPWPQGAHGEG 186 >gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] Length = 297 Score = 29.3 bits (64), Expect = 1.4 Identities = 31/100 (31%), Positives = 36/100 (36%), Gaps = 18/100 (18%) Query: 50 SSGPAQLVLAACSGPQ--RWGAAFGSLCELGLCPSPHGASL---PSTALTLTQLVLAARS 104 S PA A SG RW + + C L L P P GAS P L A S Sbjct: 69 SGPPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAAS 128 Query: 105 STGAYALRLC---TGPP---APRPASLACVSDCAEGHWEK 138 S RLC + PP P P +C HW + Sbjct: 129 SCSLPRCRLCPERSAPPRRRGPPPLPTSC-------HWAR 161 >gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] Length = 297 Score = 29.3 bits (64), Expect = 1.4 Identities = 31/100 (31%), Positives = 36/100 (36%), Gaps = 18/100 (18%) Query: 50 SSGPAQLVLAACSGPQ--RWGAAFGSLCELGLCPSPHGASL---PSTALTLTQLVLAARS 104 S PA A SG RW + + C L L P P GAS P L A S Sbjct: 69 SGPPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAAS 128 Query: 105 STGAYALRLC---TGPP---APRPASLACVSDCAEGHWEK 138 S RLC + PP P P +C HW + Sbjct: 129 SCSLPRCRLCPERSAPPRRRGPPPLPTSC-------HWAR 161 >gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] Length = 297 Score = 29.3 bits (64), Expect = 1.4 Identities = 31/100 (31%), Positives = 36/100 (36%), Gaps = 18/100 (18%) Query: 50 SSGPAQLVLAACSGPQ--RWGAAFGSLCELGLCPSPHGASL---PSTALTLTQLVLAARS 104 S PA A SG RW + + C L L P P GAS P L A S Sbjct: 69 SGPPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAAS 128 Query: 105 STGAYALRLC---TGPP---APRPASLACVSDCAEGHWEK 138 S RLC + PP P P +C HW + Sbjct: 129 SCSLPRCRLCPERSAPPRRRGPPPLPTSC-------HWAR 161 >gi|207452735 epiplakin 1 [Homo sapiens] Length = 5090 Score = 29.3 bits (64), Expect = 1.4 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 17/106 (16%) Query: 12 QRMAGLVLPDFRYGLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAF 71 QR A ++LP R + + + A +D Q L Q LA S A L++ G +R+ Sbjct: 873 QRQADIMLPALRSRVTVHQLLEAGIIDQQLLDQVLAGTISPEALLLM---DGVRRYLCGL 929 Query: 72 GSLCELGLCPSPHGASL----------PSTALTLTQLVLAARSSTG 107 G++ + L PS SL P AL L L A+++TG Sbjct: 930 GAVGGVRLLPSGQRLSLYQAMRQKLLGPRVALAL----LEAQAATG 971 >gi|28269707 C-type lectin domain family 14, member A [Homo sapiens] Length = 490 Score = 29.3 bits (64), Expect = 1.4 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 9/86 (10%) Query: 70 AFGSLCELG---LCPSPH-GASLPSTALTLTQLVLAAR--SSTGAYALRLCTGPPAPRPA 123 A G LC+ LCP+P GA+ + QL AA S G LC G P Sbjct: 166 ANGYLCKYQFEVLCPAPRPGAASNLSYRAPFQLHSAALDFSPPGTEVSALCRGQ---LPI 222 Query: 124 SLACVSDCAEGHWEKPGQDAGCTDDG 149 S+ C++D W+K D C G Sbjct: 223 SVTCIADEIGARWDKLSGDVLCPCPG 248 >gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2790 Score = 28.1 bits (61), Expect = 3.2 Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 46 LALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPSP-HGA-SLPS 90 + LL GPA+L AA S P A S G PSP H A SLPS Sbjct: 63 ILLLIVGPARLPGAAPSTPPSTMATLNSASTTGTTPSPGHNAPSLPS 109 >gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo sapiens] Length = 474 Score = 28.1 bits (61), Expect = 3.2 Identities = 19/78 (24%), Positives = 32/78 (41%) Query: 52 GPAQLVLAACSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAARSSTGAYAL 111 GPA + + +R G G LC+ +C + A++ ++ L A G + Sbjct: 74 GPAGIRVRVLCAGRRSGRLCGHLCQSAVCRATLRAAVWASVLAFCVPGDAQGGRAGIHVR 133 Query: 112 RLCTGPPAPRPASLACVS 129 LC G + +P C S Sbjct: 134 VLCAGRRSGQPCRHPCQS 151 >gi|76443679 proprotein convertase subtilisin/kexin type 4 [Homo sapiens] Length = 755 Score = 28.1 bits (61), Expect = 3.2 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 10/78 (12%) Query: 48 LLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPSPHG----------ASLPSTALTLTQ 97 LL G A+ + A +GPQ +A GLC + G A P T+ Sbjct: 573 LLLYGTAEDMTARPTGPQVTSSACVQRDTEGLCQACDGPAYILGQLCLAYCPPRFFNHTR 632 Query: 98 LVLAARSSTGAYALRLCT 115 LV A T A ALR+C+ Sbjct: 633 LVTAGPGHTAAPALRVCS 650 >gi|239757230 PREDICTED: hypothetical protein [Homo sapiens] Length = 144 Score = 27.7 bits (60), Expect = 4.1 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 81 PSPHGASLPST---ALTLTQLVLAARSSTGAYALRLCTGPPAPRPAS 124 P P AS P++ T+T+ +ARS+ A GP AP P S Sbjct: 37 PEPTQASQPASQRGGATVTKPAASARSAAAATGFPCSPGPRAPPPPS 83 >gi|239751738 PREDICTED: hypothetical protein [Homo sapiens] Length = 144 Score = 27.7 bits (60), Expect = 4.1 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 81 PSPHGASLPST---ALTLTQLVLAARSSTGAYALRLCTGPPAPRPAS 124 P P AS P++ T+T+ +ARS+ A GP AP P S Sbjct: 37 PEPTQASQPASQRGGATVTKPAASARSAAAATGFPCSPGPRAPPPPS 83 >gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo sapiens] Length = 144 Score = 27.7 bits (60), Expect = 4.1 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 81 PSPHGASLPST---ALTLTQLVLAARSSTGAYALRLCTGPPAPRPAS 124 P P AS P++ T+T+ +ARS+ A GP AP P S Sbjct: 37 PEPTQASQPASQRGGATVTKPAASARSAAAATGFPCSPGPRAPPPPS 83 >gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapiens] Length = 681 Score = 27.7 bits (60), Expect = 4.1 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 81 PSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAPRPASLACVSDCAE------G 134 P+P A S++ + + VL + + R G P PR +L+ SD G Sbjct: 554 PAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGG 613 Query: 135 HWEKPGQDAGCTD 147 + PG CT+ Sbjct: 614 PLDAPGSPLACTE 626 >gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapiens] Length = 681 Score = 27.7 bits (60), Expect = 4.1 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 81 PSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPAPRPASLACVSDCAE------G 134 P+P A S++ + + VL + + R G P PR +L+ SD G Sbjct: 554 PAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGG 613 Query: 135 HWEKPGQDAGCTD 147 + PG CT+ Sbjct: 614 PLDAPGSPLACTE 626 >gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] Length = 765 Score = 27.7 bits (60), Expect = 4.1 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 5/96 (5%) Query: 50 SSGPAQLVLAACSGPQRWGAAFGSLCELGLCPSPHGASLPSTALTLTQLVLAAR-----S 104 SS Q GP+ +GS +L P GA P+ +L+ L + S Sbjct: 583 SSYSLQQASVLSEGPRGPALRYGSRDDLVAGPGFGGARNPALQTSLSSLSSSVSRAPRTS 642 Query: 105 STGAYALRLCTGPPAPRPASLACVSDCAEGHWEKPG 140 S+ A + + P PRP+S + S +G PG Sbjct: 643 SSSLQADQASSNAPGPRPSSGSHRSPARQGLPSPPG 678 >gi|151301175 hypothetical protein LOC58489 [Homo sapiens] Length = 329 Score = 27.7 bits (60), Expect = 4.1 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 11/85 (12%) Query: 63 GPQRWGAAFGSLCELGL---CPSPHGASLPSTALTLTQLVLAARSSTGAYALRLCTGPPA 119 GP+ G + G LC L CPS A L T VLA GA G A Sbjct: 5 GPRMNGFSLGELCWLFCCPPCPSRIAAKLAFLPPEPTYTVLAP-EQRGA-------GASA 56 Query: 120 PRPASLACVSDCAEGHWEKPGQDAG 144 P PA + A+ ++P + AG Sbjct: 57 PAPAQATAAAAAAQPAPQQPEEGAG 81 >gi|4885327 free fatty acid receptor 1 [Homo sapiens] Length = 300 Score = 27.3 bits (59), Expect = 5.4 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 25 GLLLGLDVWASWLDHQWLKQTLALLSSGPAQLVLA---ACSGPQRWGAA----FGSLCEL 77 GL+ GL+ WLDH + +G + A A +GP R+ + F L Sbjct: 139 GLVFGLEAPGGWLDHSNTSLGINTPVNGSPVCLEAWDPASAGPARFSLSLLLFFLPLAIT 198 Query: 78 GLCPSPHGASLPSTALTLTQLVLAARSSTGA-YALRLCTGP 117 C +L + LT + + AA + GA L LC GP Sbjct: 199 AFCYVGCLRALARSGLTHRRKLRAAWVAGGALLTLLLCVGP 239 >gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] Length = 634 Score = 27.3 bits (59), Expect = 5.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 115 TGPPAPRPASLACVSDCAEGHWEK 138 T PAP P+S +C ++C +G K Sbjct: 611 TSTPAPSPSSQSCTANCNQGEETK 634 >gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] Length = 680 Score = 27.3 bits (59), Expect = 5.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 115 TGPPAPRPASLACVSDCAEGHWEK 138 T PAP P+S +C ++C +G K Sbjct: 657 TSTPAPSPSSQSCTANCNQGEETK 680 >gi|30039694 zinc finger protein 598 [Homo sapiens] Length = 904 Score = 27.3 bits (59), Expect = 5.4 Identities = 12/19 (63%), Positives = 13/19 (68%) Query: 78 GLCPSPHGASLPSTALTLT 96 GL PSPH A +PS A T T Sbjct: 716 GLLPSPHPACVPSPATTTT 734 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.134 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,458,683 Number of Sequences: 37866 Number of extensions: 367137 Number of successful extensions: 1090 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 1071 Number of HSP's gapped (non-prelim): 49 length of query: 155 length of database: 18,247,518 effective HSP length: 93 effective length of query: 62 effective length of database: 14,725,980 effective search space: 913010760 effective search space used: 913010760 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.