Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FFAR1 Sequence: fasta or formatted (300aa) NCBI GI: 4885327
Description:

free fatty acid receptor 1

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.3         43           2
 C cysteine            3.3         10           1
 D aspartate           1.3          4           1
 E glutamate           1.0          3           1
 F phenylalanine       5.0         15           2
 G glycine            11.3         34           3
 H histidine           1.7          5           1
 I isoleucine          1.7          5           1
 K lysine              2.0          6           1
 L leucine            18.3         55           3
 M methionine          0.3          1           1
 N asparagine          3.0          9           1
 P proline             7.0         21           2
 Q glutamine           1.3          4           1
 R arginine            5.0         15           2
 S serine              6.7         20           1
 T threonine           4.0         12           1
 V valine              6.7         20           2
 W tryptophan          2.7          8           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   free fatty acid receptor 1 
FFAR3                 0.183   free fatty acid receptor 3 
FFAR2                 0.168   free fatty acid receptor 2 
F2R                   0.102   coagulation factor II receptor precursor 
P2RY8                 0.097   G-protein coupled purinergic receptor P2Y8 
F2RL3                 0.092   coagulation factor II (thrombin) receptor-like 3 pre...
GPR20                 0.088   G protein-coupled receptor 20 
LPAR5                 0.087   lysophosphatidic acid receptor 5 
LPAR5                 0.087   lysophosphatidic acid receptor 5 
GPR55                 0.083   G protein-coupled receptor 55 
GPR17                 0.083   G protein-coupled receptor 17 isoform b 
GPR17                 0.083   G protein-coupled receptor 17 isoform b 
GPR17                 0.083   G protein-coupled receptor 17 isoform a 
GPR17                 0.083   G protein-coupled receptor 17 isoform a 
F2RL2                 0.080   coagulation factor II (thrombin) receptor-like 2 prec...
P2RY6                 0.075   pyrimidinergic receptor P2Y6 
P2RY6                 0.075   pyrimidinergic receptor P2Y6 
P2RY6                 0.075   pyrimidinergic receptor P2Y6 
P2RY6                 0.075   pyrimidinergic receptor P2Y6 
GPR25                 0.075   G protein-coupled receptor 25 
GPR183                0.073   EBV-induced G protein-coupled receptor 2 
IL8RA                 0.071   interleukin 8 receptor alpha 
GPR4                  0.071   G protein-coupled receptor 4 
SSTR5                 0.071   somatostatin receptor 5 
GPR68                 0.071   G protein-coupled receptor 68 
P2RY2                 0.070   purinergic receptor P2Y2 
P2RY2                 0.070   purinergic receptor P2Y2 
P2RY2                 0.070   purinergic receptor P2Y2 
CXCR3                 0.066   chemokine (C-X-C motif) receptor 3 isoform B 
GPR44                 0.066   G protein-coupled receptor 44 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press