Search of human proteins with 239756373

Search of human proteins with 239756373

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756373 PREDICTED: similar to elongation factor Tu GTP
binding domain containing 1 [Homo sapiens]
         (263 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756373 PREDICTED: similar to elongation factor Tu GTP bind...   536   e-153
gi|239750897 PREDICTED: similar to elongation factor Tu GTP bind...   536   e-153
gi|239745282 PREDICTED: similar to elongation factor Tu GTP bind...   536   e-153
gi|94966754 elongation factor Tu GTP binding domain containing 1...   244   7e-65
gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi...   129   3e-30
gi|94966752 elongation factor Tu GTP binding domain containing 1...   112   3e-25
gi|157426893 GUF1 GTPase homolog [Homo sapiens]                       100   2e-21
gi|217272894 elongation factor Tu GTP binding domain containing ...    84   1e-16
gi|217272892 elongation factor Tu GTP binding domain containing ...    84   1e-16
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]        76   3e-14
gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo s...    75   8e-14
gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo s...    75   8e-14
gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo s...    75   8e-14
gi|34147630 Tu translation elongation factor, mitochondrial prec...    62   4e-10
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform...    53   2e-07
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1...    53   2e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    49   3e-06
gi|239757543 PREDICTED: similar to eukaryotic translation elonga...    48   1e-05
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H...    48   1e-05
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H...    48   1e-05
gi|53729339 mitochondrial translational initiation factor 2 prec...    40   0.002
gi|53729337 mitochondrial translational initiation factor 2 prec...    40   0.002
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp...    37   0.013
gi|46094014 peptide chain release factor 3 [Homo sapiens]              36   0.030
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]       36   0.030
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]       36   0.030
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]       36   0.030
gi|190343021 Sec24-related protein D [Homo sapiens]                    32   0.43 
gi|57222570 codanin 1 [Homo sapiens]                                   32   0.74 
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre...    31   0.96 

>gi|239756373 PREDICTED: similar to elongation factor Tu GTP binding
           domain containing 1 [Homo sapiens]
          Length = 263

 Score =  536 bits (1382), Expect = e-153
 Identities = 263/263 (100%), Positives = 263/263 (100%)

Query: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60
           MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH
Sbjct: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60

Query: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120
           LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA
Sbjct: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120

Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180
           GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH
Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180

Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240
           LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI
Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240

Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263
           CDGCIIVVDAVEGVCPQPREWRD
Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263


>gi|239750897 PREDICTED: similar to elongation factor Tu GTP binding
           domain containing 1 [Homo sapiens]
          Length = 263

 Score =  536 bits (1382), Expect = e-153
 Identities = 263/263 (100%), Positives = 263/263 (100%)

Query: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60
           MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH
Sbjct: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60

Query: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120
           LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA
Sbjct: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120

Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180
           GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH
Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180

Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240
           LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI
Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240

Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263
           CDGCIIVVDAVEGVCPQPREWRD
Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263


>gi|239745282 PREDICTED: similar to elongation factor Tu GTP binding
           domain containing 1 [Homo sapiens]
          Length = 263

 Score =  536 bits (1382), Expect = e-153
 Identities = 263/263 (100%), Positives = 263/263 (100%)

Query: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60
           MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH
Sbjct: 1   MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60

Query: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120
           LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA
Sbjct: 61  LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120

Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180
           GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH
Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180

Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240
           LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI
Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240

Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263
           CDGCIIVVDAVEGVCPQPREWRD
Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263


>gi|94966754 elongation factor Tu GTP binding domain containing 1
           isoform 1 [Homo sapiens]
          Length = 1120

 Score =  244 bits (622), Expect = 7e-65
 Identities = 122/126 (96%), Positives = 124/126 (98%)

Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191
           MVLNSLDKMIQLQKNTANIRNICVLAHVD GKTTLADCLISSNGIISS LAGKLRYMDSR
Sbjct: 1   MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR 60

Query: 192 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAV 251
           EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGH+DFSS+VSTAVRICDGCIIVVDAV
Sbjct: 61  EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV 120

Query: 252 EGVCPQ 257
           EGVCPQ
Sbjct: 121 EGVCPQ 126


>gi|4503483 eukaryotic translation elongation factor 2 [Homo
           sapiens]
          Length = 858

 Score =  129 bits (324), Expect = 3e-30
 Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 12/138 (8%)

Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191
           MV  ++D++  +    ANIRN+ V+AHVD GK+TL D L+   GII+S  AG+ R+ D+R
Sbjct: 1   MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTR 60

Query: 192 EDEQIRGITMKSSAISLHYATGNEE------------YLINLIDSPGHMDFSSDVSTAVR 239
           +DEQ R IT+KS+AISL Y     +            +LINLIDSPGH+DFSS+V+ A+R
Sbjct: 61  KDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALR 120

Query: 240 ICDGCIIVVDAVEGVCPQ 257
           + DG ++VVD V GVC Q
Sbjct: 121 VTDGALVVVDCVSGVCVQ 138


>gi|94966752 elongation factor Tu GTP binding domain containing 1
           isoform 2 [Homo sapiens]
          Length = 1069

 Score =  112 bits (280), Expect = 3e-25
 Identities = 67/126 (53%), Positives = 72/126 (57%), Gaps = 51/126 (40%)

Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191
           MVLNSLDKMIQLQKNTANIRNI               C+++                   
Sbjct: 1   MVLNSLDKMIQLQKNTANIRNI---------------CVLA------------------- 26

Query: 192 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAV 251
                            H   GNEEYLINLIDSPGH+DFSS+VSTAVRICDGCIIVVDAV
Sbjct: 27  -----------------HVDHGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV 69

Query: 252 EGVCPQ 257
           EGVCPQ
Sbjct: 70  EGVCPQ 75


>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
          Length = 669

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 1/109 (0%)

Query: 149 NIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISL 208
           NIRN  ++AHVD GK+TLAD L+   G I      K + +D  + E+ RGIT+K+   SL
Sbjct: 67  NIRNFSIVAHVDHGKSTLADRLLELTGTIDKTKNNK-QVLDKLQVERERGITVKAQTASL 125

Query: 209 HYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQ 257
            Y    ++YL+NLID+PGH+DFS +VS ++  C G ++VVDA EG+  Q
Sbjct: 126 FYNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQ 174


>gi|217272894 elongation factor Tu GTP binding domain containing 2
           isoform b [Homo sapiens]
          Length = 937

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183
           L++  + + +  +D +  L  N+  IRN+ +  H+  GKT   DCLI  ++  I      
Sbjct: 69  LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 128

Query: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242
            L Y D    EQ RG+ +KS+ +++    T  + YL N++D+PGH++FS +V+  +RI D
Sbjct: 129 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 188

Query: 243 GCIIVVDAVEGV 254
           G ++ +DA EGV
Sbjct: 189 GVVLFIDAAEGV 200


>gi|217272892 elongation factor Tu GTP binding domain containing 2
           isoform a [Homo sapiens]
          Length = 972

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183
           L++  + + +  +D +  L  N+  IRN+ +  H+  GKT   DCLI  ++  I      
Sbjct: 104 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 163

Query: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242
            L Y D    EQ RG+ +KS+ +++    T  + YL N++D+PGH++FS +V+  +RI D
Sbjct: 164 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 223

Query: 243 GCIIVVDAVEGV 254
           G ++ +DA EGV
Sbjct: 224 GVVLFIDAAEGV 235


>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
          Length = 751

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 9/110 (8%)

Query: 150 IRNICVLAHVDRGKTTLADCLISSNGIISS--HLAGKL---RYMDSREDEQIRGITMKSS 204
           IRNI + AH+D GKTTL + ++   G I+    + GK      MDS E E+ RGIT++S+
Sbjct: 46  IRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSA 105

Query: 205 AISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254
           A    +   N    IN+ID+PGH+DF+ +V  A+R+ DG ++V+ AV GV
Sbjct: 106 ATYTMWKDVN----INIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGV 151


>gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo
           sapiens]
          Length = 732

 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%)

Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203
           A IRNI ++AH+D GKTT  + ++  +G   S   G +   D+  D    E+ RGIT++S
Sbjct: 68  AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125

Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254
           +A++  +    + Y +NLID+PGH+DF+ +V   +R+ DG + V DA  GV
Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172


>gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo
           sapiens]
          Length = 513

 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%)

Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203
           A IRNI ++AH+D GKTT  + ++  +G   S   G +   D+  D    E+ RGIT++S
Sbjct: 68  AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125

Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254
           +A++  +    + Y +NLID+PGH+DF+ +V   +R+ DG + V DA  GV
Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172


>gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo
           sapiens]
          Length = 779

 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%)

Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203
           A IRNI ++AH+D GKTT  + ++  +G   S   G +   D+  D    E+ RGIT++S
Sbjct: 68  AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125

Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254
           +A++  +    + Y +NLID+PGH+DF+ +V   +R+ DG + V DA  GV
Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172


>gi|34147630 Tu translation elongation factor, mitochondrial
           precursor [Homo sapiens]
          Length = 455

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYA 211
           N+  + HVD GKTTL   +             K   +D+  +E+ RGIT+  +A  + Y+
Sbjct: 62  NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITI--NAAHVEYS 119

Query: 212 TGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260
           T    Y     D PGH D+  ++ T     DGCI+VV A +G  PQ RE
Sbjct: 120 TAARHYAHT--DCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTRE 166


>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
           [Homo sapiens]
          Length = 642

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 137 LDKMIQLQKNTAN--IRNICVLAHVDRGKTTLADCLISSNGIIS----------SHLAGK 184
           +D   +L+K      + N+ V+ HVD GK+TL   ++   G I+          S  AGK
Sbjct: 203 IDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGK 262

Query: 185 LRY-----MDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVR 239
             +     +D   +E+ RG+TM          T     +I L+D+PGH DF  ++ T   
Sbjct: 263 ASFAYAWVLDETGEERERGVTMDVGMTKFETTTK----VITLMDAPGHKDFIPNMITGAA 318

Query: 240 ICDGCIIVVDAVEG 253
             D  ++VVDA  G
Sbjct: 319 QADVAVLVVDASRG 332


>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
           [Homo sapiens]
          Length = 684

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 137 LDKMIQLQKNTAN--IRNICVLAHVDRGKTTLADCLISSNGIIS----------SHLAGK 184
           +D   +L+K      + N+ V+ HVD GK+TL   ++   G I+          S  AGK
Sbjct: 245 IDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGK 304

Query: 185 LRY-----MDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVR 239
             +     +D   +E+ RG+TM          T     +I L+D+PGH DF  ++ T   
Sbjct: 305 ASFAYAWVLDETGEERERGVTMDVGMTKFETTTK----VITLMDAPGHKDFIPNMITGAA 360

Query: 240 ICDGCIIVVDAVEG 253
             D  ++VVDA  G
Sbjct: 361 QADVAVLVVDASRG 374


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 32/131 (24%)

Query: 146 NTANIRN--ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKS 203
           NT  +R   ICVL HVD GKT + D               KLR+    +D +  GIT + 
Sbjct: 625 NTEKLRAPIICVLGHVDTGKTKILD---------------KLRHTHV-QDGEAGGITQQI 668

Query: 204 SAISLHYATGNEEYLIN--------------LIDSPGHMDFSSDVSTAVRICDGCIIVVD 249
            A ++     NE+  +               +ID+PGH  FS+  +    +CD  I+VVD
Sbjct: 669 GATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVD 728

Query: 250 AVEGVCPQPRE 260
            + G+ PQ  E
Sbjct: 729 IMHGLEPQTIE 739


>gi|239757543 PREDICTED: similar to eukaryotic translation
           elongation factor 1 alpha 2 [Homo sapiens]
          Length = 444

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196
           NI V+ HVD GK+T    LI   G I                 G  +Y   +D  + E+ 
Sbjct: 9   NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           RGIT+  S           +Y I +ID+PGH DF  ++ T     D  +++V A  G
Sbjct: 69  RGITIDISLWKFE----TTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121


>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
           sapiens]
          Length = 462

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196
           NI V+ HVD GK+T    LI   G I                 G  +Y   +D  + E+ 
Sbjct: 9   NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           RGIT+  S           +Y + +ID+PGH DF  ++ T     D  +++V A  G
Sbjct: 69  RGITIDISLWKFE----TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121


>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
           sapiens]
          Length = 463

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196
           NI V+ HVD GK+T    LI   G I                 G  +Y   +D  + E+ 
Sbjct: 9   NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           RGIT+  S           +Y I +ID+PGH DF  ++ T     D  +++V A  G
Sbjct: 69  RGITIDISLWKFE----TTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121


>gi|53729339 mitochondrial translational initiation factor 2
           precursor [Homo sapiens]
          Length = 727

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 19/108 (17%)

Query: 153 ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYAT 212
           + ++ HVD GKTTL D               K R       E   GIT    A  +   +
Sbjct: 183 VTIMGHVDHGKTTLLD---------------KFRKTQVAAVET-GGITQHIGAFLVSLPS 226

Query: 213 GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260
           G +   I  +D+PGH  FS+  +   ++ D  ++VV A +GV  Q  E
Sbjct: 227 GEK---ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVE 271


>gi|53729337 mitochondrial translational initiation factor 2
           precursor [Homo sapiens]
          Length = 727

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 19/108 (17%)

Query: 153 ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYAT 212
           + ++ HVD GKTTL D               K R       E   GIT    A  +   +
Sbjct: 183 VTIMGHVDHGKTTLLD---------------KFRKTQVAAVET-GGITQHIGAFLVSLPS 226

Query: 213 GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260
           G +   I  +D+PGH  FS+  +   ++ D  ++VV A +GV  Q  E
Sbjct: 227 GEK---ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVE 271


>gi|54607086 eukaryotic elongation factor,
           selenocysteine-tRNA-specific [Homo sapiens]
          Length = 596

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 30/130 (23%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITM---------- 201
           N+ VL H+D GKT LA  L ++    +          D +   + RGIT+          
Sbjct: 9   NVGVLGHIDSGKTALARALSTTASTAA---------FDKQPQSRERGITLDLGFSCFSVP 59

Query: 202 -----KSSAISLHYAT------GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDA 250
                +SS      A       G     + L+D PGH      +    +I D  ++V+D 
Sbjct: 60  LPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDV 119

Query: 251 VEGVCPQPRE 260
            +G+  Q  E
Sbjct: 120 TKGMQTQSAE 129


>gi|46094014 peptide chain release factor 3 [Homo sapiens]
          Length = 628

 Score = 36.2 bits (82), Expect = 0.030
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196
           N+  + HVD GK+T+   ++   G++      K                  +D+ ++E+ 
Sbjct: 205 NVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 264

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           +G T++      ++ T  + + I  +D+PGH  F  ++       D  ++V+ A +G
Sbjct: 265 KGKTVEVG--RAYFETERKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 317


>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
          Length = 499

 Score = 36.2 bits (82), Expect = 0.030
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196
           N+  + HVD GK+T+   ++   G++      K                  +D+ ++E+ 
Sbjct: 76  NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 135

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           +G T++      ++ T  + + I  +D+PGH  F  ++       D  ++V+ A +G
Sbjct: 136 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 188


>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
          Length = 636

 Score = 36.2 bits (82), Expect = 0.030
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196
           N+  + HVD GK+T+   ++   G++      K                  +D+ ++E+ 
Sbjct: 213 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 272

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           +G T++      ++ T  + + I  +D+PGH  F  ++       D  ++V+ A +G
Sbjct: 273 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 325


>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
          Length = 637

 Score = 36.2 bits (82), Expect = 0.030
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%)

Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196
           N+  + HVD GK+T+   ++   G++      K                  +D+ ++E+ 
Sbjct: 214 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 273

Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253
           +G T++      ++ T  + + I  +D+PGH  F  ++       D  ++V+ A +G
Sbjct: 274 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 326


>gi|190343021 Sec24-related protein D [Homo sapiens]
          Length = 1032

 Score = 32.3 bits (72), Expect = 0.43
 Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 13/150 (8%)

Query: 78  MPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGAGLVGLLQPEIIMVLNSL 137
           +PG  LGAG+  ++ +    +   Q S      + G  PG  A + G  QP+  +  +S+
Sbjct: 211 LPGQTLGAGYPPQQANSGPQMAGAQLS------YPGGFPGGPAQMAGPPQPQKKLDPDSI 264

Query: 138 DKMIQLQKNTANIRNICVLAHVDRGK---TTLADCLISSNGIISSHLAGKLRYMDSREDE 194
              IQ+ +N    R   V A   RG+       DC+I   G  S        Y      +
Sbjct: 265 PSPIQVIENDRASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSD 324

Query: 195 QIRGITMKSSAISLHYAT--GNEE--YLIN 220
             +   +  +A+   +AT   NE   YL+N
Sbjct: 325 MAKQAQIPLAAVIKPFATIPSNESPLYLVN 354


>gi|57222570 codanin 1 [Homo sapiens]
          Length = 1227

 Score = 31.6 bits (70), Expect = 0.74
 Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 27  ALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQHLQLLHSYSARRRQGNRGMPGDRLGAG 86
           A +P  PG G  +GSRGARS    P  + +      L       RR G R  PG     G
Sbjct: 80  AALPGRPG-GPPRGSRGARSQLFPPTEAQSTAAEAPLA------RRGGRRRGPGPARERG 132

Query: 87  FRRRKRSVRAGVLDPQSSRRFRSS 110
            R  +  V    L     RR R S
Sbjct: 133 GRGLEEGVSGESLPGAGGRRLRGS 156


>gi|41152097 DNA segment on chromosome X and Y (unique) 155
           expressed sequence isoform 1 [Homo sapiens]
          Length = 695

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 31  SSPGDGHSQGSRGARSVHL----GPRVSFTAPQHLQLLHSYSA--RRRQGNRGMPGDRLG 84
           SS  DG  +  R     H      PR   T+P H +   S+S    RR+ +R   G    
Sbjct: 610 SSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASR 669

Query: 85  AGFRRRKRSVRAGVLDPQSSRRFRSSW 111
              R R+RS R+    P    R RS+W
Sbjct: 670 KHSRHRRRSERSRSRSPS---RHRSTW 693


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,167,411
Number of Sequences: 37866
Number of extensions: 522734
Number of successful extensions: 1361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 47
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.