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Search of human proteins with 239756340
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756340 PREDICTED: hypothetical LOC645212, partial [Homo
sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756340 PREDICTED: hypothetical LOC645212, partial [Homo sa... 247 1e-66
gi|239750823 PREDICTED: hypothetical LOC645212 [Homo sapiens] 247 1e-66
gi|239745185 PREDICTED: hypothetical protein [Homo sapiens] 247 1e-66
gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens] 31 0.19
gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens] 31 0.19
gi|169172087 PREDICTED: hypothetical protein [Homo sapiens] 30 0.42
gi|45387951 transmembrane protein 108 [Homo sapiens] 30 0.55
gi|210147493 transmembrane protein 108 [Homo sapiens] 30 0.55
gi|119964718 desmoglein 3 preproprotein [Homo sapiens] 29 0.72
gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] 29 0.94
gi|122937211 KIAA0368 protein [Homo sapiens] 29 0.94
gi|194018537 phosphoribosyl pyrophosphate synthetase-associated ... 28 1.6
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 28 1.6
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 28 1.6
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 28 1.6
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 28 1.6
gi|239755230 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|239753000 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|239749770 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|239744029 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens] 28 2.1
gi|226051591 zinc finger protein 414 isoform 2 [Homo sapiens] 28 2.1
gi|5729889 jumping translocation breakpoint [Homo sapiens] 27 2.7
gi|7657307 LIM domains containing 1 [Homo sapiens] 27 2.7
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 27 2.7
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens] 27 3.6
gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo ... 27 3.6
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 27 3.6
gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo ... 27 3.6
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 27 3.6
>gi|239756340 PREDICTED: hypothetical LOC645212, partial [Homo
sapiens]
Length = 119
Score = 247 bits (631), Expect = 1e-66
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 60
GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS
Sbjct: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 60
Query: 61 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 119
PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR
Sbjct: 61 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 119
>gi|239750823 PREDICTED: hypothetical LOC645212 [Homo sapiens]
Length = 149
Score = 247 bits (631), Expect = 1e-66
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 60
GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS
Sbjct: 31 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 90
Query: 61 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 119
PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR
Sbjct: 91 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 149
>gi|239745185 PREDICTED: hypothetical protein [Homo sapiens]
Length = 149
Score = 247 bits (631), Expect = 1e-66
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 60
GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS
Sbjct: 31 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPS 90
Query: 61 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 119
PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR
Sbjct: 91 PANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEGVVAR 149
>gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens]
Length = 1168
Score = 31.2 bits (69), Expect = 0.19
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRR 58
GLR+ GF+ T+ +T G PD+ PR G R+L + F + A L R
Sbjct: 83 GLRAVALGFE--DTEVTTTAGGTAEVAPDAVPRSGRSCWRRLVQVFQSKQFRSAKLER 138
>gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens]
Length = 1115
Score = 31.2 bits (69), Expect = 0.19
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 1 GLRSAGSGFQLPTTQTSTGVRGAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRR 58
GLR+ GF+ T+ +T G PD+ PR G R+L + F + A L R
Sbjct: 83 GLRAVALGFE--DTEVTTTAGGTAEVAPDAVPRSGRSCWRRLVQVFQSKQFRSAKLER 138
>gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 0.42
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Query: 35 GNVSARKLAEWFFGWRLNLASLRRPSPANAYPASTGGCAVPLVTVITVHGRLRIPT--PC 92
G R L W G + + + RRP+PA P G CA LR T C
Sbjct: 72 GPGEGRGLRHWPRGAPVTVPAARRPAPAPRGPKQPGCCAALAGGDTNGEWILRGSTWGLC 131
Query: 93 SEEGSEATPACGVGGRASGTP 113
+P CG G RA TP
Sbjct: 132 -----PPSPGCGAGRRALATP 147
>gi|45387951 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 0.55
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 59 PSPANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPE 114
PS ++++ T G + PL T V PTP + + S + P+ G+ AS TP+
Sbjct: 329 PSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQ 384
>gi|210147493 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 0.55
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 59 PSPANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPE 114
PS ++++ T G + PL T V PTP + + S + P+ G+ AS TP+
Sbjct: 329 PSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQ 384
>gi|119964718 desmoglein 3 preproprotein [Homo sapiens]
Length = 999
Score = 29.3 bits (64), Expect = 0.72
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 65 YPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEAT 100
+P +TG A+ V VI VHG LRI T + E T
Sbjct: 5 FPRTTGALAI-FVVVILVHGELRIETKGQYDEEEMT 39
>gi|239756566 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 28.9 bits (63), Expect = 0.94
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 58 RPSPANAYPASTGGCAVPLVTVITV---HGRLRIPTPCSEEGSEATPAC-GVGGRASG 111
RPSP A+ GG P V R R+P G + A GVGGRASG
Sbjct: 116 RPSPCQAHDCERGGGGRPSHRAAAVDQGRPRPRVPRGQPLPGLHPSAAAPGVGGRASG 173
>gi|122937211 KIAA0368 protein [Homo sapiens]
Length = 2017
Score = 28.9 bits (63), Expect = 0.94
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 21 RGAGRPPPDSGPRVGNVSARKLAEW-FFGWRLNLASLRRPSPANAYPASTGGCAVP 75
R A R P PR +++R+ A+ G RL L S RP A +P + GG P
Sbjct: 108 RAAPRGPARRTPRSTALTSRRRAQRPRHGDRLRLRSEARPRAAGDWPCARGGAVRP 163
>gi|194018537 phosphoribosyl pyrophosphate synthetase-associated
protein 1 [Homo sapiens]
Length = 385
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 50 RLNLASLRRPSPANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGR 108
RL LA + + G + P+V TVH L +P ++E T VGGR
Sbjct: 221 RLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVVGDVGGR 279
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 28.1 bits (61), Expect = 1.6
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 3 RSAGSGFQLPTTQTSTGVRGAGRPPPDS-------GPRVGNVSARKLAEWFFGWRLNLAS 55
RSA S L + +G RGA PP S GPR + S A + +
Sbjct: 455 RSAESLLSLRPSALDSGPRGARDSPPGSPRRRPGPGPRSASASLLPDAFALTAFECEPQA 514
Query: 56 LRR-PSPANAYPASTGG 71
LRR P P A PA+ G
Sbjct: 515 LRRPPGPFPAAPAAPDG 531
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 56 LRRPSPANAYPASTGGCAVPLVT----VITVHGRLRIPTPCSEEGSEATPACGVGGRAS 110
L+ PSPAN+ S G P T + V G L+ PTP S + TP GGR+S
Sbjct: 1120 LQPPSPANS--GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM--QGGRSS 1174
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 56 LRRPSPANAYPASTGGCAVPLVT----VITVHGRLRIPTPCSEEGSEATPACGVGGRAS 110
L+ PSPAN+ S G P T + V G L+ PTP S + TP GGR+S
Sbjct: 1160 LQPPSPANS--GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM--QGGRSS 1214
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 56 LRRPSPANAYPASTGGCAVPLVT----VITVHGRLRIPTPCSEEGSEATPACGVGGRAS 110
L+ PSPAN+ S G P T + V G L+ PTP S + TP GGR+S
Sbjct: 1107 LQPPSPANS--GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM--QGGRSS 1161
>gi|239755230 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 27.7 bits (60), Expect = 2.1
Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 3 RSAGSGFQLPTTQTSTGVRGA-GRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPSP 61
R A +GF+ P + + R A G P SG R R+ W G S+ R
Sbjct: 23 RGAPAGFRSPGSAAAYDPRSAQGMGPARSGGR------RQRRGWVSG---RCRSMERGYR 73
Query: 62 ANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEG 115
A P + VP R P P S G+ A+P GVG R S G
Sbjct: 74 AR--PGAQKSFPVP-------RRRPLAPLPRSTLGTHASPGSGVGSRPSVPASG 118
>gi|239753000 PREDICTED: hypothetical protein [Homo sapiens]
Length = 171
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 25 RPPPDSGPRV--GNVSARKLAEWFFGWRLNLASLRRPSPANAYPA 67
RPP SGP + S + A WR L +PSPA YPA
Sbjct: 38 RPPSGSGPTTLCSSTSQSRPAAKASSWRC--LYLSKPSPATHYPA 80
>gi|239749770 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 27.7 bits (60), Expect = 2.1
Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 3 RSAGSGFQLPTTQTSTGVRGA-GRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPSP 61
R A +GF+ P + + R A G P SG R R+ W G S+ R
Sbjct: 23 RGAPAGFRSPGSAAAYDPRSAQGMGPARSGGR------RQRRGWVSG---RCRSMERGYR 73
Query: 62 ANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEG 115
A P + VP R P P S G+ A+P GVG R S G
Sbjct: 74 AR--PGAQKSFPVP-------RRRPLAPLPRSTLGTHASPGSGVGSRPSVPASG 118
>gi|239744029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 27.7 bits (60), Expect = 2.1
Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 3 RSAGSGFQLPTTQTSTGVRGA-GRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPSP 61
R A +GF+ P + + R A G P SG R R+ W G S+ R
Sbjct: 23 RGAPAGFRSPGSAAAYDPRSAQGMGPARSGGR------RQRRGWVSG---RCRSMERGYR 73
Query: 62 ANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGSEATPACGVGGRASGTPEG 115
A P + VP R P P S G+ A+P GVG R S G
Sbjct: 74 AR--PGAQKSFPVP-------RRRPLAPLPRSTLGTHASPGSGVGSRPSVPASG 118
>gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]
Length = 390
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 57 RRPSPANAYPASTGGCAV--PLVTVITVHGRLRIPTPCSEEG 96
RRP P P S+ GC + P V + H R P S EG
Sbjct: 101 RRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEG 142
>gi|226051591 zinc finger protein 414 isoform 2 [Homo sapiens]
Length = 312
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 57 RRPSPANAYPASTGGCAV--PLVTVITVHGRLRIPTPCSEEG 96
RRP P P S+ GC + P V + H R P S EG
Sbjct: 101 RRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEG 142
>gi|5729889 jumping translocation breakpoint [Homo sapiens]
Length = 146
Score = 27.3 bits (59), Expect = 2.7
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 11/86 (12%)
Query: 22 GAGRPPPDSGPRVGNVSARKLAEWFFGWRLNLASLRRPSPANAYPASTGGCAVPLVTVIT 81
GAGRP G R L + L L P AST LV
Sbjct: 4 GAGRP--------GLPQGRHLCWLLCAFTLKLCQAEAPVQEEKLSASTSNLPCWLVEEFV 55
Query: 82 VHGRLRIPTPCSEEGSEATPACGVGG 107
V +PCS ++ TP CG G
Sbjct: 56 VAEEC---SPCSNFRAKTTPECGPTG 78
>gi|7657307 LIM domains containing 1 [Homo sapiens]
Length = 676
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 83 HGRLRIPTPCSEEGSEATPACGVGGRASGTPEGV 116
H +L + + S EGS G+GGR+S P G+
Sbjct: 229 HRQLSLSSSRSSEGSLGGQNSGIGGRSSEKPTGL 262
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 50 RLNLASLRRPSPANAYPASTGGCAVPLVTVITVHGRLRIPTPCSEEGS---EATPACGVG 106
RL SL P P G V + GRL+ P+P EGS A G
Sbjct: 3121 RLRPGSLVPPLETEKLPRKRAGAPVGGSPGLAKRGRLQPPSPLGPEGSVEESEAEASGEE 3180
Query: 107 GRASGTP 113
GTP
Sbjct: 3181 EEGDGTP 3187
>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
Length = 626
Score = 26.9 bits (58), Expect = 3.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 39 ARKLAEWFFGWRLNLASLRRPSPANAYPASTGGCAVPLVTVITVHGRLR 87
ARK W W L A L+ P Y S+ G +P + + G+LR
Sbjct: 91 ARKTENWLSEWWLKTAYLQYRQPVVIY--SSPGVMLPKQDFVDLQGQLR 137
>gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo
sapiens]
Length = 342
Score = 26.9 bits (58), Expect = 3.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 40 RKLAEWFFGWRLNLASLRRPSPANAYPASTGGC 72
R+L + F GWR+ + P P + GGC
Sbjct: 291 RRLVQVFHGWRVEMMLQLLPPPPGPRLRAAGGC 323
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 26.9 bits (58), Expect = 3.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 48 GWRLNLASLRRPSPANAYPASTG 70
G+R LA+LR P PA A A TG
Sbjct: 553 GYRAGLAALRTPPPAPAGNAGTG 575
>gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo
sapiens]
Length = 342
Score = 26.9 bits (58), Expect = 3.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 40 RKLAEWFFGWRLNLASLRRPSPANAYPASTGGC 72
R+L + F GWR+ + P P + GGC
Sbjct: 291 RRLVQVFHGWRVEMMLQLLPPPPGPRLRAAGGC 323
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 26.9 bits (58), Expect = 3.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 48 GWRLNLASLRRPSPANAYPASTG 70
G+R LA+LR P PA A A TG
Sbjct: 553 GYRAGLAALRTPPPAPAGNAGTG 575
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,965,263
Number of Sequences: 37866
Number of extensions: 308692
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 841
Number of HSP's gapped (non-prelim): 68
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.