Guide to the Human Genome
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Name: PRPSAP1 Sequence: fasta or formatted (385aa) NCBI GI: 194018537
Description:

phosphoribosyl pyrophosphate synthetase-associated protein 1

Referenced in:

Pentose Phosphate Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         40           3
 C cysteine            1.3          5           1
 D aspartate           4.4         17           2
 E glutamate           6.8         26           2
 F phenylalanine       2.6         10           2
 G glycine             4.9         19           2
 H histidine           2.1          8           1
 I isoleucine          8.8         34           2
 K lysine              5.7         22           2
 L leucine             8.3         32           4
 M methionine          3.4         13           2
 N asparagine          3.1         12           1
 P proline             6.5         25           3
 Q glutamine           3.1         12           1
 R arginine            6.5         25           2
 S serine              6.0         23           2
 T threonine           4.9         19           1
 V valine              8.3         32           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoribosyl pyrophosphate synthetase-associated ... 
PRPSAP2               0.744   phosphoribosyl pyrophosphate synthetase-associated pr...
PRPS1L1               0.328   phosphoribosyl pyrophosphate synthetase 1-like 1 [Ho...
PRPS2                 0.326   phosphoribosyl pyrophosphate synthetase 2 isoform 2 [...
PRPS2                 0.325   phosphoribosyl pyrophosphate synthetase 2 isoform 1 ...
PRPS1                 0.322   phosphoribosyl pyrophosphate synthetase 1 
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isofo...
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isofo...
LOC100287250          0.007   PREDICTED: hypothetical protein XP_002344493 
SNAP91                0.006   synaptosomal-associated protein, 91kDa homolog 
LOC100290139          0.006   PREDICTED: hypothetical protein XP_002346782 
LOC100288835          0.006   PREDICTED: hypothetical protein XP_002342616 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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