Guide to the Human Genome
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Name: CRAT Sequence: fasta or formatted (626aa) NCBI GI: 21618331
Description:

carnitine acetyltransferase precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         48           3
 C cysteine            1.3          8           1
 D aspartate           5.6         35           2
 E glutamate           5.0         31           3
 F phenylalanine       4.5         28           2
 G glycine             4.8         30           3
 H histidine           3.4         21           2
 I isoleucine          4.6         29           1
 K lysine              6.5         41           2
 L leucine            10.4         65           2
 M methionine          3.4         21           1
 N asparagine          3.0         19           1
 P proline             5.6         35           2
 Q glutamine           5.1         32           2
 R arginine            5.0         31           2
 S serine              7.3         46           2
 T threonine           5.0         31           1
 V valine              7.0         44           2
 W tryptophan          1.1          7           2
 Y tyrosine            3.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carnitine acetyltransferase precursor 
CHAT                  0.365   choline acetyltransferase isoform 1 
CHAT                  0.365   choline acetyltransferase isoform 1 
CHAT                  0.365   choline acetyltransferase isoform 3 
CHAT                  0.365   choline acetyltransferase isoform 1 
CHAT                  0.365   choline acetyltransferase isoform 1 
CHAT                  0.365   choline acetyltransferase isoform 1 
CHAT                  0.365   choline acetyltransferase isoform 2 
CROT                  0.217   peroxisomal carnitine O-octanoyltransferase isoform ...
CPT1A                 0.207   carnitine palmitoyltransferase 1A liver isoform 1 [H...
CROT                  0.205   peroxisomal carnitine O-octanoyltransferase isoform...
CPT1B                 0.205   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.205   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.205   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.205   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.205   carnitine palmitoyltransferase 1B isoform a 
CPT1A                 0.199   carnitine palmitoyltransferase 1A liver isoform 2 [H...
CPT2                  0.194   carnitine O-palmitoyltransferase precursor 
CPT1B                 0.192   carnitine palmitoyltransferase 1B isoform c 
CPT1C                 0.192   carnitine palmitoyltransferase 1C isoform 2 
CPT1C                 0.191   carnitine palmitoyltransferase 1C isoform 1 
CPT1B                 0.153   carnitine palmitoyltransferase 1B isoform d 
DCDC5                 0.006   PREDICTED: doublecortin domain containing 5 
DCDC5                 0.006   PREDICTED: doublecortin domain containing 5 
DCDC5                 0.006   PREDICTED: doublecortin domain containing 5 
ACLY                  0.006   ATP citrate lyase isoform 2 
ACLY                  0.006   ATP citrate lyase isoform 1 
PSMD2                 0.004   proteasome 26S non-ATPase subunit 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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