Search of human proteins with 239756276

Search of human proteins with 239756276

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756276 PREDICTED: hypothetical protein [Homo sapiens]
         (141 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756276 PREDICTED: hypothetical protein [Homo sapiens]           290   3e-79
gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-ri...    38   0.003
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            36   0.012
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            36   0.012
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ...    34   0.035
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ...    34   0.035
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    33   0.078
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ...    33   0.078
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro...    33   0.078
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro...    33   0.078
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]          33   0.078
gi|110665701 leucine rich repeat containing 37A [Homo sapiens]         33   0.078
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ...    33   0.10 
gi|189181750 human immunodeficiency virus type I enhancer bindin...    33   0.10 
gi|116089331 human immunodeficiency virus type I enhancer bindin...    33   0.10 
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat...    32   0.13 
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat...    32   0.13 
gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat...    32   0.13 
gi|239757195 PREDICTED: hypothetical protein [Homo sapiens]            32   0.13 
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    32   0.13 
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]            32   0.13 
gi|239751702 PREDICTED: hypothetical protein XP_002347969 [Homo ...    32   0.13 
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    32   0.13 
gi|239746206 PREDICTED: hypothetical protein XP_002343662 [Homo ...    32   0.13 
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    32   0.13 
gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [...    32   0.13 
gi|105990526 hairy/enhancer-of-split related with YRPW motif 1 i...    32   0.17 

>gi|239756276 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score =  290 bits (742), Expect = 3e-79
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MEEGLSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRS 60
           MEEGLSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRS
Sbjct: 1   MEEGLSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRS 60

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGTAQPSR 120
           SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGTAQPSR
Sbjct: 61  SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGTAQPSR 120

Query: 121 RHQRHRFADAKPSARPLSQPG 141
           RHQRHRFADAKPSARPLSQPG
Sbjct: 121 RHQRHRFADAKPSARPLSQPG 141


>gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-rich
           carboxy-terminal domain, 4 [Homo sapiens]
          Length = 184

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 6/59 (10%)

Query: 68  SGAARHAPW-LRPAASYACPGL--GLQPRDAPRLLGPAPLPGQPASGARGTAQPSRRHQ 123
           S AA H P  LR    YA PGL  GL+PR AP  LGP P P QP + A G   P    Q
Sbjct: 19  SAAAAHGPHALRTLPPYAGPGLDSGLRPRGAP--LGPPP-PRQPGALAYGAFGPPSSFQ 74


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 33  FRKKSLAAPY----------AGRPRSNNWFLQSAHLRSSPRSAASSGAARHAPWLRPAAS 82
           FR+ +LAAP            GRPR  +W LQ+     + + A  + A R  P + PAA 
Sbjct: 650 FRRIALAAPQFPHLESNTLGRGRPRPGDWALQATDFPDATKPALGA-ALRRGPIVGPAAG 708

Query: 83  YACPGLGLQP 92
           +A P     P
Sbjct: 709 FAAPAAERDP 718


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 33  FRKKSLAAPY----------AGRPRSNNWFLQSAHLRSSPRSAASSGAARHAPWLRPAAS 82
           FR+ +LAAP            GRPR  +W LQ+     + + A  + A R  P + PAA 
Sbjct: 650 FRRIALAAPQFPHLESNTLGRGRPRPGDWTLQATDFPDATKPALGA-ALRRGPIVGPAAG 708

Query: 83  YACPGLGLQP 92
           +A P     P
Sbjct: 709 FAAPAAERDP 718


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 42/136 (30%), Positives = 54/136 (39%), Gaps = 43/136 (31%)

Query: 45  RPRSNNWFLQSAHLRSSPRSAASSGAARHAPW-----LRPAASYACPGLGLQ--PRDAPR 97
           RPR N  +   AH   +PRSA+S+ AA  + +     + P +S A     L+  P  APR
Sbjct: 22  RPRVNEQWGSRAH--PNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPR 79

Query: 98  LLGPAPLPGQPA-----SGARGTA----------------------------QPSRRHQR 124
           LL P  L G PA     +G+R  A                            QP  RH  
Sbjct: 80  LL-PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPH 138

Query: 125 HRFADAKPSARPLSQP 140
            R+  A P A PL  P
Sbjct: 139 TRYPRAVPEATPLRPP 154


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 15  ASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRSAASSGAARHA 74
           ++RR G      S   +  R  +   P A  PR+   FL  +   S PR A S       
Sbjct: 702 SARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRD 761

Query: 75  PWLRPAASYACPGLGLQPRDAPR-LLGPAPLPGQPASGAR 113
                 A    P  GL  R APR L+  +P PG+ A  AR
Sbjct: 762 DEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAAR 801


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 15  ASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRSAASSGAARHA 74
           ++RR G      S   +  R  +   P A  PR+   FL  +   S PR A S       
Sbjct: 702 SARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRD 761

Query: 75  PWLRPAASYACPGLGLQPRDAPR-LLGPAPLPGQPASGAR 113
                 A    P  GL  R APR L+  +P PG+ A  AR
Sbjct: 762 DEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAAR 801


>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
           sapiens]
          Length = 870

 Score = 34.3 bits (77), Expect = 0.035
 Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 16/87 (18%)

Query: 39  AAPYAGRPRSNNWFLQSAHLRSSPRSAASSGAARHAPWLRPAAS-YACPGLGLQPRDAPR 97
           A P AGR R   W            +A   GA R  P   PAAS    P    +  +APR
Sbjct: 728 AGPIAGRRRRRGWTF---------AAALRKGAPREQPPASPAASPCQAPRAPEKETEAPR 778

Query: 98  LLG------PAPLPGQPASGARGTAQP 118
           L G      P PLP  P        QP
Sbjct: 779 LRGRATAVAPRPLPAAPGFSGLCVLQP 805


>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
           sapiens]
          Length = 538

 Score = 34.3 bits (77), Expect = 0.035
 Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 16/87 (18%)

Query: 39  AAPYAGRPRSNNWFLQSAHLRSSPRSAASSGAARHAPWLRPAAS-YACPGLGLQPRDAPR 97
           A P AGR R   W            +A   GA R  P   PAAS    P    +  +APR
Sbjct: 396 AGPIAGRRRRRGWTF---------AAALRKGAPREQPPASPAASPCQAPRAPEKETEAPR 446

Query: 98  LLG------PAPLPGQPASGARGTAQP 118
           L G      P PLP  P        QP
Sbjct: 447 LRGRATAVAPRPLPAAPGFSGLCVLQP 473


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 13/87 (14%)

Query: 55  SAHLRSSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARG 114
           S+  RS  RS  SSG+  H+P            L  + RD  +    A   G+P  G+R 
Sbjct: 586 SSSSRSRSRSPDSSGSRSHSP------------LRSKQRDVAQARTHANPRGRPKMGSRS 633

Query: 115 TAQPSRRHQRHRFADAKPSARPLSQPG 141
           T++ SR   R R   A  ++R    PG
Sbjct: 634 TSE-SRSRSRSRSRSASSNSRKSLSPG 659


>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
           sapiens]
          Length = 347

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 46  PRSNNWFLQSAHLRSSPRSAASSGAARHAPW--LRPAASYACPGLGLQPRDAPRLLGPAP 103
           P+S  W  Q A  R   R A  SG          R + +    G      +A R+ GP P
Sbjct: 138 PQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAGARRSLAEAERV-GPKP 196

Query: 104 LPGQPASGARGTAQPSRRHQRHRFADAKPSARP 136
           LP Q  SGA G   P+       F+ A P+ RP
Sbjct: 197 LPEQERSGASGRCLPAPA----AFSAAAPARRP 225


>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 1 [Homo sapiens]
          Length = 1635

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 90  LQPRDAPRLLGPAPL----PGQPASGARGTAQPSRRHQRHRFADAKPSARP 136
           +QP ++PR +  +P     PGQP      T  P   HQ H  A    S +P
Sbjct: 364 VQPSESPREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKP 414


>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 2 [Homo sapiens]
          Length = 1700

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 90  LQPRDAPRLLGPAPL----PGQPASGARGTAQPSRRHQRHRFADAKPSARP 136
           +QP ++PR +  +P     PGQP      T  P   HQ H  A    S +P
Sbjct: 364 VQPSESPREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKP 414


>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
          Length = 1700

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 90  LQPRDAPRLLGPAPL----PGQPASGARGTAQPSRRHQRHRFADAKPSARP 136
           +QP ++PR +  +P     PGQP      T  P   HQ H  A    S +P
Sbjct: 364 VQPSESPREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKP 414


>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
          Length = 1700

 Score = 33.1 bits (74), Expect = 0.078
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 90  LQPRDAPRLLGPAPL----PGQPASGARGTAQPSRRHQRHRFADAKPSARP 136
           +QP ++PR +  +P     PGQP      T  P   HQ H  A    S +P
Sbjct: 364 VQPSESPREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKP 414


>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
           sapiens]
          Length = 252

 Score = 32.7 bits (73), Expect = 0.10
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 59  RSSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLG-PAPLPGQPASGARGTAQ 117
           R   R A ++GAAR      P +  A P   L    A  L G P   P  PA+G RG   
Sbjct: 125 RIRQREAGAAGAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGS 184

Query: 118 PSRRHQRHRFADAKPSARP 136
            +    R     A+P+A P
Sbjct: 185 GALGLGRREKLAARPAATP 203


>gi|189181750 human immunodeficiency virus type I enhancer binding
            protein 3 b [Homo sapiens]
          Length = 2405

 Score = 32.7 bits (73), Expect = 0.10
 Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 60   SSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGT-AQP 118
            S PRSA     A   P   P+A    PGLGL PR    L  PAPLP +  S +  T A P
Sbjct: 2079 SPPRSAPPGKWALAGPG-SPSAGEHGPGLGLDPR---VLFPPAPLPHKLLSRSPETCASP 2134

Query: 119  SRRHQRHRFADAKPSARPLS 138
             +   R       P A PLS
Sbjct: 2135 WKAESRSPSCSPGP-AHPLS 2153



 Score = 26.6 bits (57), Expect = 7.3
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGL---QPRDAPRLLGPAPLPGQPASGARGTAQ 117
           SPR   + G A        ++S   PG G    Q   A  LL P P PG P+S  R  +Q
Sbjct: 16  SPRKRLTKGEAIQTS---VSSSVPYPGSGTAATQESPAQELLAPQPFPG-PSSVLREGSQ 71

Query: 118 PSRRHQRHRFADAKPSARP 136
                Q+      KP  RP
Sbjct: 72  EKTGQQQ------KPPKRP 84


>gi|116089331 human immunodeficiency virus type I enhancer binding
            protein 3 [Homo sapiens]
          Length = 2406

 Score = 32.7 bits (73), Expect = 0.10
 Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 60   SSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGTAQPS 119
            S PRSA     A   P   P+A    PGLGL PR    L  PAPLP +  S +  T    
Sbjct: 2079 SPPRSAPPGKWALAGPG-SPSAGEHGPGLGLDPR---VLFPPAPLPHKLLSRSPETCASP 2134

Query: 120  RRHQRHRFADAKPS-ARPLS 138
             +    R     P  A PLS
Sbjct: 2135 WQKAESRSPSCSPGPAHPLS 2154



 Score = 26.6 bits (57), Expect = 7.3
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGL---QPRDAPRLLGPAPLPGQPASGARGTAQ 117
           SPR   + G A        ++S   PG G    Q   A  LL P P PG P+S  R  +Q
Sbjct: 16  SPRKRLTKGEAIQTS---VSSSVPYPGSGTAATQESPAQELLAPQPFPG-PSSVLREGSQ 71

Query: 118 PSRRHQRHRFADAKPSARP 136
                Q+      KP  RP
Sbjct: 72  EKTGQQQ------KPPKRP 84


>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform a [Homo sapiens]
          Length = 629

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 27/104 (25%), Positives = 39/104 (37%)

Query: 5   LSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRS 64
           L T  +SS ++S       +G S     +R  +      G P ++          S P  
Sbjct: 455 LDTCPSSSTASSISSSGGSSGSSSDNRTYRYSNRYCGGPGPPITDCEMNSPQVPPSQPLR 514

Query: 65  AASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQP 108
             + G   H     PA++ + PG G Q    PR LG  P P  P
Sbjct: 515 PWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPSPTSP 558


>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform c [Homo sapiens]
          Length = 601

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 27/104 (25%), Positives = 39/104 (37%)

Query: 5   LSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRS 64
           L T  +SS ++S       +G S     +R  +      G P ++          S P  
Sbjct: 427 LDTCPSSSTASSISSSGGSSGSSSDNRTYRYSNRYCGGPGPPITDCEMNSPQVPPSQPLR 486

Query: 65  AASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQP 108
             + G   H     PA++ + PG G Q    PR LG  P P  P
Sbjct: 487 PWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPSPTSP 530


>gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform b [Homo sapiens]
          Length = 589

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 27/104 (25%), Positives = 39/104 (37%)

Query: 5   LSTTTTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRS 64
           L T  +SS ++S       +G S     +R  +      G P ++          S P  
Sbjct: 415 LDTCPSSSTASSISSSGGSSGSSSDNRTYRYSNRYCGGPGPPITDCEMNSPQVPPSQPLR 474

Query: 65  AASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQP 108
             + G   H     PA++ + PG G Q    PR LG  P P  P
Sbjct: 475 PWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPSPTSP 518


>gi|239757195 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 83

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 67  SSGAARHAPW-LRPAASYACPGLGLQPRDAPRLLG---------PAPLPGQPASGARGTA 116
           S  AA    W +R    +AC  +G+QP DAP L G         P P P     G+R  +
Sbjct: 3   SRTAASKVSWAMRLETIFACVDVGVQPIDAPELRGSRQPDPAAPPLPTPRGTGLGSRSVS 62

Query: 117 QPSRRH 122
              R H
Sbjct: 63  PGLRGH 68


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 20/119 (16%)

Query: 9   TTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLR--------S 60
           + ++ +A+R +G +  G S L +   + SLA P    P +      SA  R        S
Sbjct: 239 SVAAAAAARCLGLSPPGRSRLFSP--RSSLARPPLRFPPARPALSPSARRRCRVNWNQSS 296

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRL---LGPAPLPGQPASGARGTA 116
            P S  +  AARH P  RP AS      GL+ R A R     GPAP P  PA+   GT+
Sbjct: 297 RPASHNAQRAARHIP-SRPRAS------GLRARAARRPGLDPGPAPYPLTPAALRPGTS 348



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 59  RSSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPA---SGARGT 115
           R++   +A+ G ARH      AA+ A   LGL P    RL  P     +P      AR  
Sbjct: 220 RAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPA 279

Query: 116 AQPSRRHQRHRFADAKPSARPLS 138
             PS R  R    +   S+RP S
Sbjct: 280 LSPSAR--RRCRVNWNQSSRPAS 300


>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 380

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 55  SAHLRSSPRSAASSG--AARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGA 112
           +  L  +PR AA +     RHA    P A    PG     R  PRLL PA  P +PA   
Sbjct: 154 AVQLVPAPRQAAQAADTGPRHAS---PGARRPAPGAR---RSRPRLLRPASPPPRPAPRR 207

Query: 113 RGTAQPSRRHQRHRFADAKPSARP 136
           R TA    RH+  R    +   +P
Sbjct: 208 RSTAP---RHEGGRPGRGRTRRQP 228


>gi|239751702 PREDICTED: hypothetical protein XP_002347969 [Homo
           sapiens]
          Length = 83

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 67  SSGAARHAPW-LRPAASYACPGLGLQPRDAPRLLG---------PAPLPGQPASGARGTA 116
           S  AA    W +R    +AC  +G+QP DAP L G         P P P     G+R  +
Sbjct: 3   SRTAASKVSWAMRLETIFACVDVGVQPIDAPELRGSRQPDPAAPPLPTPRGTGLGSRSVS 62

Query: 117 QPSRRH 122
              R H
Sbjct: 63  PGLRGH 68


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 20/119 (16%)

Query: 9   TTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLR--------S 60
           + ++ +A+R +G +  G S L +   + SLA P    P +      SA  R        S
Sbjct: 239 SVAAAAAARCLGLSPPGRSRLFSP--RSSLARPPLRFPPARPALSPSARRRCRVNWNQSS 296

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRL---LGPAPLPGQPASGARGTA 116
            P S  +  AARH P  RP AS      GL+ R A R     GPAP P  PA+   GT+
Sbjct: 297 RPASHNAQRAARHIP-SRPRAS------GLRARAARRPGLDPGPAPYPLTPAALRPGTS 348



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 59  RSSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPA---SGARGT 115
           R++   +A+ G ARH      AA+ A   LGL P    RL  P     +P      AR  
Sbjct: 220 RAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPA 279

Query: 116 AQPSRRHQRHRFADAKPSARPLS 138
             PS R  R    +   S+RP S
Sbjct: 280 LSPSAR--RRCRVNWNQSSRPAS 300


>gi|239746206 PREDICTED: hypothetical protein XP_002343662 [Homo
           sapiens]
          Length = 83

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 67  SSGAARHAPW-LRPAASYACPGLGLQPRDAPRLLG---------PAPLPGQPASGARGTA 116
           S  AA    W +R    +AC  +G+QP DAP L G         P P P     G+R  +
Sbjct: 3   SRTAASKVSWAMRLETIFACVDVGVQPIDAPELRGSRQPDPAAPPLPTPRGTGLGSRSVS 62

Query: 117 QPSRRH 122
              R H
Sbjct: 63  PGLRGH 68


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 20/119 (16%)

Query: 9   TTSSFSASRRMGSAVTGGSCLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLR--------S 60
           + ++ +A+R +G +  G S L +   + SLA P    P +      SA  R        S
Sbjct: 239 SVAAAAAARCLGLSPPGRSRLFSP--RSSLARPPLRFPPARPALSPSARRRCRVNWNQSS 296

Query: 61  SPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRL---LGPAPLPGQPASGARGTA 116
            P S  +  AARH P  RP AS      GL+ R A R     GPAP P  PA+   GT+
Sbjct: 297 RPASHNAQRAARHIP-SRPRAS------GLRARAARRPGLDPGPAPYPLTPAALRPGTS 348



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 59  RSSPRSAASSGAARHAPWLRPAASYACPGLGLQPRDAPRLLGPAPLPGQPA---SGARGT 115
           R++   +A+ G ARH      AA+ A   LGL P    RL  P     +P      AR  
Sbjct: 220 RAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPA 279

Query: 116 AQPSRRHQRHRFADAKPSARPLS 138
             PS R  R    +   S+RP S
Sbjct: 280 LSPSAR--RRCRVNWNQSSRPAS 300


>gi|24308352 DMRT-like family B with proline-rich C-terminal, 1
           [Homo sapiens]
          Length = 342

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 28  CLCTVFRKKSLAAPYAGRPRSNNWFLQSAHLRSSPRSAASSGAARHAPWLRPAASYACPG 87
           C     R+K +AA    + ++     ++A     P+ A+ + AA  AP   PAAS     
Sbjct: 40  CYLISERQKIMAAQKVLKTQAAEEEQEAALCAQGPKQASGAAAAAPAPVPVPAASLRPLS 99

Query: 88  LGLQPRDA----------------PRLLGPAPLPGQPASGARGTAQPSRR 121
            G    DA                PR   P P   QP  G R   +PS R
Sbjct: 100 PGTPSGDADPGPEGRAAACFFEQPPRGRNPGPRALQPVLGGRSHVEPSER 149


>gi|105990526 hairy/enhancer-of-split related with YRPW motif 1
           isoform b [Homo sapiens]
          Length = 308

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 78  RPAASYACPGLGLQPRDA-----PRLLGPAPLPGQPASGARGTAQPSRRHQRHRFADAKP 132
           R AAS A  GLG  P        P +  P  LP      A  TA P+  H + R   A P
Sbjct: 169 REAASGAHAGLGHIPWGTVFGHHPHIAHPLLLPQNGHGNAGTTASPTEPHHQGRLGSAHP 228

Query: 133 SARPLSQP 140
            A  L  P
Sbjct: 229 EAPALRAP 236


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.127    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,543,695
Number of Sequences: 37866
Number of extensions: 365412
Number of successful extensions: 2374
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 2163
Number of HSP's gapped (non-prelim): 476
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.