Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239755771

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239755771 PREDICTED: hypothetical protein [Homo sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755771 PREDICTED: hypothetical protein [Homo sapiens]           355   7e-99
gi|239744561 PREDICTED: hypothetical protein XP_002343188 [Homo ...   265   1e-71
gi|239755750 PREDICTED: hypothetical protein XP_002344682 [Homo ...   265   2e-71
gi|239749542 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|239743694 PREDICTED: hypothetical protein XP_002342927 [Homo ...    32   0.19 
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]        32   0.32 
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]        32   0.32 
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]        32   0.32 
gi|154426306 kinesin family member 24 [Homo sapiens]                   32   0.32 
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    32   0.32 
gi|102468717 mediator complex subunit 13 [Homo sapiens]                31   0.55 
gi|4557733 latent transforming growth factor beta binding protei...    30   0.72 
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap...    30   0.72 
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap...    30   0.72 
gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo sa...    30   0.72 
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ...    30   0.94 
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ...    30   0.94 
gi|74027251 tripartite motif-containing 33 protein isoform beta ...    30   1.2  
gi|74027249 tripartite motif-containing 33 protein isoform alpha...    30   1.2  
gi|22538426 TRAF3 interacting protein 2 isoform 1 [Homo sapiens]       30   1.2  
gi|22538428 TRAF3 interacting protein 2 isoform 2 [Homo sapiens]       30   1.2  
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]            29   2.1  
gi|151301213 acid phosphatase 6, lysophosphatidic [Homo sapiens]       29   2.1  
gi|150417973 supervillin isoform 2 [Homo sapiens]                      28   2.7  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    28   2.7  
gi|156104872 Ets2 repressor factor [Homo sapiens]                      28   3.6  
gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]         28   4.6  
gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]         28   4.6  
gi|239756584 PREDICTED: hypothetical protein [Homo sapiens]            27   6.1  
gi|239755730 PREDICTED: hypothetical protein [Homo sapiens]            27   6.1  

>gi|239755771 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 164

 Score =  355 bits (912), Expect = 7e-99
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MDHFKLRPESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEA 60
           MDHFKLRPESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEA
Sbjct: 1   MDHFKLRPESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEA 60

Query: 61  WLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPG 120
           WLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPG
Sbjct: 61  WLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPG 120

Query: 121 FHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVAHQEEADFSR 164
           FHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVAHQEEADFSR
Sbjct: 121 FHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVAHQEEADFSR 164


>gi|239744561 PREDICTED: hypothetical protein XP_002343188 [Homo
           sapiens]
          Length = 123

 Score =  265 bits (677), Expect = 1e-71
 Identities = 118/123 (95%), Positives = 120/123 (97%)

Query: 42  MPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTG 101
           MPQWMPQLPQPP ET++EAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIP FSPTG
Sbjct: 1   MPQWMPQLPQPPVETKREAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPAFSPTG 60

Query: 102 ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVAHQEEAD 161
           ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPG GVVAHQEEAD
Sbjct: 61  ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPGGGVVAHQEEAD 120

Query: 162 FSR 164
           FSR
Sbjct: 121 FSR 123


>gi|239755750 PREDICTED: hypothetical protein XP_002344682 [Homo
           sapiens]
          Length = 123

 Score =  265 bits (676), Expect = 2e-71
 Identities = 118/123 (95%), Positives = 120/123 (97%)

Query: 42  MPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTG 101
           MPQWMPQLPQPP ET++EAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIP FSPTG
Sbjct: 1   MPQWMPQLPQPPVETKQEAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPAFSPTG 60

Query: 102 ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVAHQEEAD 161
           ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPG GVVAHQEEAD
Sbjct: 61  ANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPGGGVVAHQEEAD 120

Query: 162 FSR 164
           FSR
Sbjct: 121 FSR 123


>gi|239749542 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 65  MQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPGFHLC 124
           +Q  +K  +  G++    P  AR   +    P  PTG  A AW+     +  S P  H  
Sbjct: 31  LQPARKKMVSSGQVGRRLPIHARDSAAGARGPGEPTGGRASAWLQLQPPSLRSSPLMH-- 88

Query: 125 NRIPADHAHDKHCLQRAGQRKGTAPG 150
              PA  A  +      G+R GT  G
Sbjct: 89  ---PARRAAGRGSTVSRGRRAGTPGG 111


>gi|239743694 PREDICTED: hypothetical protein XP_002342927 [Homo
           sapiens]
          Length = 136

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 65  MQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPGFHLC 124
           +Q  +K  +  G++    P  AR   +    P  PTG  A AW+     +  S P  H  
Sbjct: 31  LQPARKKMVSSGQVGRRLPIHARDSAAGARGPGEPTGGRASAWLQLQPPSLRSSPLMH-- 88

Query: 125 NRIPADHAHDKHCLQRAGQRKGTAPG 150
              PA  A  +      G+R GT  G
Sbjct: 89  ---PARRAAGRGSTVSRGRRAGTPGG 111


>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
          Length = 1082

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 58  KEAWLSAMQDGKKDSIPGGELPWNAPRTARTHC-SFRIPPFSPTGANACAWVLAALWTPH 116
           K AWLS+    ++    G +L    P  A  HC   R  P  P        +L AL+  H
Sbjct: 265 KLAWLSSSLPSERLGSVGPQLRATCPLLAELHCLPGRTDPEPPAYLGQYESILDALFRLH 324

Query: 117 SPPGFHLCNRIPADHAHDKHCLQRAGQR 144
             P  HL   + A  A D   +  AG R
Sbjct: 325 GGPSSHLVPELRA--ALDLAAIDLAGPR 350


>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
          Length = 1082

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 58  KEAWLSAMQDGKKDSIPGGELPWNAPRTARTHC-SFRIPPFSPTGANACAWVLAALWTPH 116
           K AWLS+    ++    G +L    P  A  HC   R  P  P        +L AL+  H
Sbjct: 265 KLAWLSSSLPSERLGSVGPQLRATCPLLAELHCLPGRTDPEPPAYLGQYESILDALFRLH 324

Query: 117 SPPGFHLCNRIPADHAHDKHCLQRAGQR 144
             P  HL   + A  A D   +  AG R
Sbjct: 325 GGPSSHLVPELRA--ALDLAAIDLAGPR 350


>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
          Length = 1082

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 58  KEAWLSAMQDGKKDSIPGGELPWNAPRTARTHC-SFRIPPFSPTGANACAWVLAALWTPH 116
           K AWLS+    ++    G +L    P  A  HC   R  P  P        +L AL+  H
Sbjct: 265 KLAWLSSSLPSERLGSVGPQLRATCPLLAELHCLPGRTDPEPPAYLGQYESILDALFRLH 324

Query: 117 SPPGFHLCNRIPADHAHDKHCLQRAGQR 144
             P  HL   + A  A D   +  AG R
Sbjct: 325 GGPSSHLVPELRA--ALDLAAIDLAGPR 350


>gi|154426306 kinesin family member 24 [Homo sapiens]
          Length = 1368

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 8    PESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQD 67
            P++E S  +  L + G      + S    V    +P    +   P +   +  WLS+   
Sbjct: 1060 PDNEGSPPSEQLVQDGATHSLVAESTGGPVVSHTVPSGDQEAALPVSSATRHLWLSS--- 1116

Query: 68   GKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANAC 105
               D+ PGG+LP  +P   R H + ++P        AC
Sbjct: 1117 SPPDNKPGGDLPALSPSPIRQHPADKLPSREADLGEAC 1154


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 3    HFKLRPESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWL 62
            +F+L P +  S A    AR GRGR    +   K  G  +    +P  P P +    +   
Sbjct: 1084 YFQLPPRAA-SAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPP 1142

Query: 63   SAMQDGKKDSIPGGELPWNAPRTA 86
            +     +K+SIP   +   AP T+
Sbjct: 1143 AVAAPSEKNSIPIPTIIIKAPSTS 1166


>gi|102468717 mediator complex subunit 13 [Homo sapiens]
          Length = 2174

 Score = 30.8 bits (68), Expect = 0.55
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 15/101 (14%)

Query: 29   CSI-SPLKKVGRTEMPQWMPQLPQPPAETRKEAW----LSAMQDG------KKDSIPGGE 77
            CS+ +PLK    T   Q++P +  P     +++W    L  +  G      K+      +
Sbjct: 914  CSMFAPLK----TLPSQYLPPIKLPEECIYRQSWTVGKLELLSSGPSMPFIKEGDGSNMD 969

Query: 78   LPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSP 118
              +    T +TH SF +PP S   +N+ A +L +  TP  P
Sbjct: 970  QEYGTAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFP 1010


>gi|4557733 latent transforming growth factor beta binding protein 2
           [Homo sapiens]
          Length = 1821

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 9/115 (7%)

Query: 4   FKLRPESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLS 63
           + L  E +   A +    + +  W     P +   R        +  QPPA+TR+   L 
Sbjct: 69  YSLFREQDAPVAGLQPVERAQPGWGSPRRPTEAEARRPSRAQQSRRVQPPAQTRRSTPL- 127

Query: 64  AMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSP----TGANACAWVLAALWT 114
               G++   P        PR      S   PP  P    TG N C       WT
Sbjct: 128 ----GQQQPAPRTRAAPALPRLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWT 178


>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
           sapiens]
          Length = 1038

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 28  ACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRTAR 87
           A S +P    G  + PQ  P++P PP  TR    LS    G++++       W  P +  
Sbjct: 722 AGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEET-----SQWPGPASPP 776

Query: 88  THCSFRIPPFSP 99
                R+PP  P
Sbjct: 777 -----RVPPREP 783


>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
           sapiens]
          Length = 1086

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 28  ACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRTAR 87
           A S +P    G  + PQ  P++P PP  TR    LS    G++++       W  P +  
Sbjct: 800 AGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEET-----SQWPGPASPP 854

Query: 88  THCSFRIPPFSP 99
                R+PP  P
Sbjct: 855 -----RVPPREP 861


>gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo
           sapiens]
          Length = 528

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 95  PPFSPTGANACAWVLAALWTPHSPPGFHLCNRIPA 129
           PPF  TGA   A    ++W  + PP   LC R+ A
Sbjct: 467 PPFPRTGATRGAQEPCSVWYEYEPPCTSLCARVQA 501


>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
           sapiens]
          Length = 470

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 8   PESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAW 61
           P    +RA    +R   G W   I   + VG+   P   P+LP PP  +++  +
Sbjct: 409 PPPAGTRAGTISSRISSGHWEPPILAFRIVGKQVYPPARPRLPAPPRGSQRRIY 462


>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
           sapiens]
          Length = 470

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 8   PESEQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAW 61
           P    +RA    +R   G W   I   + VG+   P   P+LP PP  +++  +
Sbjct: 409 PPPAGTRAGTISSRISSGHWEPPILAFRIVGKQVYPPARPRLPAPPRGSQRRIY 462


>gi|74027251 tripartite motif-containing 33 protein isoform beta
           [Homo sapiens]
          Length = 1110

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 13  SRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDS 72
           S    T+A   RG  + S++ ++ +     P+ +P LP  P    ++A  S++ +     
Sbjct: 644 SPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRY 703

Query: 73  IPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPP 119
           I G  LP     T         P   P+  +  +  L+   TP  PP
Sbjct: 704 ISGSHLPPQPTSTMN-------PSPGPSALSPGSSGLSNSHTPVRPP 743


>gi|74027249 tripartite motif-containing 33 protein isoform alpha
           [Homo sapiens]
          Length = 1127

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 13  SRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDS 72
           S    T+A   RG  + S++ ++ +     P+ +P LP  P    ++A  S++ +     
Sbjct: 644 SPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRY 703

Query: 73  IPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPP 119
           I G  LP     T         P   P+  +  +  L+   TP  PP
Sbjct: 704 ISGSHLPPQPTSTMN-------PSPGPSALSPGSSGLSNSHTPVRPP 743


>gi|22538426 TRAF3 interacting protein 2 isoform 1 [Homo sapiens]
          Length = 574

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 79  PWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPGFHL-C-----NRIPADHA 132
           P + PR  R+      P F P    ACA +L    +PH+P  +H  C     +++P  H 
Sbjct: 233 PQDLPRPLRSR---EFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHD 289

Query: 133 HDKHCLQRAGQ 143
           + +   Q+  Q
Sbjct: 290 YPRAAYQQVIQ 300


>gi|22538428 TRAF3 interacting protein 2 isoform 2 [Homo sapiens]
          Length = 565

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 79  PWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPPGFHL-C-----NRIPADHA 132
           P + PR  R+      P F P    ACA +L    +PH+P  +H  C     +++P  H 
Sbjct: 224 PQDLPRPLRSR---EFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHD 280

Query: 133 HDKHCLQRAGQ 143
           + +   Q+  Q
Sbjct: 281 YPRAAYQQVIQ 291


>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 551

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 24/104 (23%)

Query: 66  QDGKKDSIPGGELPW---------NAPRTARTHCSFRI-----PPFSPTGANACAWVLAA 111
           Q GK  S PG ++P           APR  R  C+ +      PPFSPTG          
Sbjct: 289 QMGKSRSSPGRQVPICSQRFSEGEEAPRRKRNICTEKRSRPADPPFSPTGFR------LI 342

Query: 112 LWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTAPGSGVVA 155
           ++T  S PG    N  P   A  +         +G A G G+ A
Sbjct: 343 IYTGPSTPG----NFAPGHWARPRVRALLWDAGRGAAAGRGLCA 382


>gi|151301213 acid phosphatase 6, lysophosphatidic [Homo sapiens]
          Length = 428

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 32  SPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIP 74
           SPLK +   E  +W PQL + P +T+ +  ++ +  G K   P
Sbjct: 63  SPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSP 105


>gi|150417973 supervillin isoform 2 [Homo sapiens]
          Length = 2214

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 89  HCSFRIPPFSPTGANACAWVLAALWTPHSPPGFHLCNRIPADHAHDKHCLQRAGQRKGTA 148
           H +  + P +P  A+ C+WV +A      PP   +      D      C  +A + +G  
Sbjct: 375 HTAKLVTPETPENASECSWVASATQNVPKPPSLTVLEGDGRDSPVLHVCESKAEEEEGEG 434

Query: 149 PG 150
            G
Sbjct: 435 EG 436


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 49  LPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWV 108
           LP PPA    + +L   + G+  +  G   P  AP           P  SPT   +    
Sbjct: 345 LPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAP-----------PARSPTTELSSKSQ 393

Query: 109 LAALWTPHSPPGFHLCN 125
            A  WTP   PG  L N
Sbjct: 394 QATAWTPTQQPGGQLRN 410


>gi|156104872 Ets2 repressor factor [Homo sapiens]
          Length = 548

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 73  IPGGELPWNAPRTARTHCSFRIPPFSPTGANACAWVLAALWTPHSPP 119
           + GG +P +AP        FR PP +P+       VL+    P SPP
Sbjct: 123 LAGGAVPQSAPPVPSGGSHFRFPPSTPSE------VLSPTEDPRSPP 163


>gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]
          Length = 1290

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 98  SPTGANACAWVLAALWTPHSPPGFH-LCNRIPADHAH 133
           SP G+ A A   +AL  P +PP FH +  R PA+ ++
Sbjct: 528 SPLGSTASAPAPSALPAPPAPPVFHGMLERAPAEPSY 564


>gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]
          Length = 1291

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 98  SPTGANACAWVLAALWTPHSPPGFH-LCNRIPADHAH 133
           SP G+ A A   +AL  P +PP FH +  R PA+ ++
Sbjct: 528 SPLGSTASAPAPSALPAPPAPPVFHGMLERAPAEPSY 564


>gi|239756584 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 349

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 19/78 (24%)

Query: 11  EQSRAAITLARKGRGRWACSISPLKKVGRTEMPQWMPQLP-----QPPAETRKEAWLSAM 65
           EQ R +  L     G W          GRT    W    P     +PP E   +AW    
Sbjct: 65  EQRRGSFLLEGGSAGPWGLE-------GRT----WSFSRPSRLFLKPPIEVEDDAWGIKK 113

Query: 66  QDGKKDSIPGGELPWNAP 83
             GK+DS    +  WN P
Sbjct: 114 MTGKEDS---KDFLWNGP 128


>gi|239755730 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 108

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 26  RWACSISPLKKVGRTEMPQWMPQLPQPPAETRKEAWLSAMQDGKKDSIPGGELPWNAPRT 85
           R ACS +P        +  W P    P + T   +  SA     +D+I     P   P +
Sbjct: 6   RSACSDAPRDVANLLRLSSWKPDCRTPASATTVPSSPSA-----EDAILTPGAPQGPPSS 60

Query: 86  ARTHC---SFRIPPFSPTG-ANACA 106
           AR  C   +   PP    G   ACA
Sbjct: 61  ARPECGQNAIASPPIPARGPPTACA 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,452,488
Number of Sequences: 37866
Number of extensions: 447717
Number of successful extensions: 1196
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1174
Number of HSP's gapped (non-prelim): 50
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press