BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239755418 PREDICTED: hypothetical protein [Homo sapiens] (133 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239755418 PREDICTED: hypothetical protein [Homo sapiens] 296 4e-81 gi|239749898 PREDICTED: hypothetical protein [Homo sapiens] 296 4e-81 gi|239744198 PREDICTED: hypothetical protein XP_002343072 [Homo ... 296 4e-81 gi|13186249 fibroblast growth factor receptor 1 isoform 9 precur... 33 0.067 gi|13186238 fibroblast growth factor receptor 1 isoform 5 precur... 33 0.067 gi|13186234 fibroblast growth factor receptor 1 isoform 3 precur... 33 0.067 gi|105990522 fibroblast growth factor receptor 1 isoform 1 precu... 33 0.067 gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 32 0.11 gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 32 0.15 gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] 32 0.19 gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] 32 0.19 gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] 32 0.19 gi|13186241 fibroblast growth factor receptor 1 isoform 6 precur... 31 0.25 gi|13186236 fibroblast growth factor receptor 1 isoform 4 precur... 31 0.25 gi|13186251 fibroblast growth factor receptor 1 isoform 2 precur... 31 0.25 gi|239757317 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25 gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens] 31 0.25 gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 30 0.43 gi|239754263 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|239748801 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo ... 30 0.57 gi|239740892 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo ... 30 0.57 gi|239740718 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|239740668 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|239513934 PREDICTED: hypothetical protein [Homo sapiens] 30 0.57 gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 30 0.57 gi|27436927 synoviolin 1 isoform b [Homo sapiens] 30 0.74 gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 30 0.74 gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens] 30 0.74 >gi|239755418 PREDICTED: hypothetical protein [Homo sapiens] Length = 133 Score = 296 bits (757), Expect = 4e-81 Identities = 133/133 (100%), Positives = 133/133 (100%) Query: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP Sbjct: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 Query: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP Sbjct: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 Query: 121 LRSGRAWSSGGRS 133 LRSGRAWSSGGRS Sbjct: 121 LRSGRAWSSGGRS 133 >gi|239749898 PREDICTED: hypothetical protein [Homo sapiens] Length = 133 Score = 296 bits (757), Expect = 4e-81 Identities = 133/133 (100%), Positives = 133/133 (100%) Query: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP Sbjct: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 Query: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP Sbjct: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 Query: 121 LRSGRAWSSGGRS 133 LRSGRAWSSGGRS Sbjct: 121 LRSGRAWSSGGRS 133 >gi|239744198 PREDICTED: hypothetical protein XP_002343072 [Homo sapiens] Length = 133 Score = 296 bits (757), Expect = 4e-81 Identities = 133/133 (100%), Positives = 133/133 (100%) Query: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP Sbjct: 1 MGCWAAEPLGYCDGGNTGLECTGWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP 60 Query: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP Sbjct: 61 TGPDDVSRKLASGKAVECLRFSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWP 120 Query: 121 LRSGRAWSSGGRS 133 LRSGRAWSSGGRS Sbjct: 121 LRSGRAWSSGGRS 133 >gi|13186249 fibroblast growth factor receptor 1 isoform 9 precursor [Homo sapiens] Length = 785 Score = 33.1 bits (74), Expect = 0.067 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 45 DWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 D P +P APYW T P+ + +KL + A + ++F P TP Sbjct: 142 DNTKPNRMPVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 184 >gi|13186238 fibroblast growth factor receptor 1 isoform 5 precursor [Homo sapiens] Length = 302 Score = 33.1 bits (74), Expect = 0.067 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 45 DWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 D P +P APYW T P+ + +KL + A + ++F P TP Sbjct: 53 DNTKPNRMPVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 95 >gi|13186234 fibroblast growth factor receptor 1 isoform 3 precursor [Homo sapiens] Length = 733 Score = 33.1 bits (74), Expect = 0.067 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 45 DWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 D P +P APYW T P+ + +KL + A + ++F P TP Sbjct: 53 DNTKPNRMPVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 95 >gi|105990522 fibroblast growth factor receptor 1 isoform 1 precursor [Homo sapiens] Length = 822 Score = 33.1 bits (74), Expect = 0.067 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 45 DWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 D P +P APYW T P+ + +KL + A + ++F P TP Sbjct: 142 DNTKPNRMPVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 184 >gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] Length = 1503 Score = 32.3 bits (72), Expect = 0.11 Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 32 KCCVELQGPRGCPDWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTPQG 91 +CC + P GCP P Y+ P G D R L +V C R P Sbjct: 593 ECCPQCPAPAGCPR-PGAAHARHQEYFSPPG-DPCRRCLCLDGSVSCQRLPCPPAPCAHP 650 Query: 92 YRGTLCRKGTGVLKGPVETFSAAASPS 118 +G C G L E S PS Sbjct: 651 RQGPCCPSCDGCLYQGKEFASGERFPS 677 >gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] Length = 348 Score = 32.0 bits (71), Expect = 0.15 Identities = 37/136 (27%), Positives = 43/136 (31%), Gaps = 27/136 (19%) Query: 10 GYCDGGNTGLECTGWA-----PPGRATKCCVELQGPRGCPDWPSPLAVPAA--------- 55 G C+ G C W+ P R C L P P P P A AA Sbjct: 190 GGCNCGGGSCSCCRWSMAGPFPCARRATCLASLSPPPKLPTAPGPRAAAAAATATSSIQY 249 Query: 56 ---PYWPPTGPDDVSRKLASGKAVECLRFSAPELLT--PQGYRGTLCRKGTGVLKGPVET 110 P PPT A CL + G +GT G V P T Sbjct: 250 PRIPLSPPTN--------CGLSAPFCLGSGGRSSIAFYVSGEKGTEFSSGRLVFVRPSST 301 Query: 111 FSAAASPSWPLRSGRA 126 S+ +PS RS RA Sbjct: 302 VSSRTAPSRGRRSLRA 317 >gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] Length = 834 Score = 31.6 bits (70), Expect = 0.19 Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 11/51 (21%) Query: 23 GW-APPGRATKCCVELQGP---RGCPDWPSPLAVPAAPYWP-----PTGPD 64 GW PPG T QGP +G PDWP P P P WP P PD Sbjct: 435 GWQTPPGWQTP--PGWQGPPDWQGPPDWPLPPDWPLPPDWPLPTDWPLPPD 483 >gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] Length = 778 Score = 31.6 bits (70), Expect = 0.19 Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 11/51 (21%) Query: 23 GW-APPGRATKCCVELQGP---RGCPDWPSPLAVPAAPYWP-----PTGPD 64 GW PPG T QGP +G PDWP P P P WP P PD Sbjct: 379 GWQTPPGWQTP--PGWQGPPDWQGPPDWPLPPDWPLPPDWPLPTDWPLPPD 427 >gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] Length = 778 Score = 31.6 bits (70), Expect = 0.19 Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 11/51 (21%) Query: 23 GW-APPGRATKCCVELQGP---RGCPDWPSPLAVPAAPYWP-----PTGPD 64 GW PPG T QGP +G PDWP P P P WP P PD Sbjct: 379 GWQTPPGWQTP--PGWQGPPDWQGPPDWPLPPDWPLPPDWPLPTDWPLPPD 427 >gi|13186241 fibroblast growth factor receptor 1 isoform 6 precursor [Homo sapiens] Length = 300 Score = 31.2 bits (69), Expect = 0.25 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 53 PAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 P APYW T P+ + +KL + A + ++F P TP Sbjct: 59 PVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 93 >gi|13186236 fibroblast growth factor receptor 1 isoform 4 precursor [Homo sapiens] Length = 731 Score = 31.2 bits (69), Expect = 0.25 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 53 PAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 P APYW T P+ + +KL + A + ++F P TP Sbjct: 59 PVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 93 >gi|13186251 fibroblast growth factor receptor 1 isoform 2 precursor [Homo sapiens] Length = 820 Score = 31.2 bits (69), Expect = 0.25 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 53 PAAPYWPPTGPDDVSRKLASGKAVECLRFSAPELLTP 89 P APYW T P+ + +KL + A + ++F P TP Sbjct: 148 PVAPYW--TSPEKMEKKLHAVPAAKTVKFKCPSSGTP 182 >gi|239757317 PREDICTED: hypothetical protein [Homo sapiens] Length = 198 Score = 31.2 bits (69), Expect = 0.25 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 8 PLGYCDGGNTGLEC----TGWAPPGRATKCCVELQG---PRGCPDWPSPLAVPAAPYWPP 60 P+GY GG +G C G P GR V G RG P SP A P A W P Sbjct: 133 PVGYPGGGESGTTCGAATAGTGPGGRGKVAAVGGPGTTWARG-PRTSSPRAGPGAATWAP 191 >gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens] Length = 1136 Score = 31.2 bits (69), Expect = 0.25 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 81 FSAPELLTPQGYRGTLCRKGTGVLKGPVETFSAAASPSWPLRSGRAWSSG 130 F P L P G G K TG LK P A++ +PL +W+ G Sbjct: 42 FPGPSLEPPAGSSGV---KATGTLKRPTSLSRHASAAGFPLSGAASWTLG 88 >gi|62000702 diacylglycerol kinase kappa [Homo sapiens] Length = 1271 Score = 30.4 bits (67), Expect = 0.43 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 10/73 (13%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPP----TGPDDVSR---KLASGKA 75 G APP + + P P WP P PA P PP P+ + +LA G Sbjct: 10 GTAPPQDGEQ---PAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPC 66 Query: 76 VECLRFSAPELLT 88 E SA EL T Sbjct: 67 PEATSESATELYT 79 >gi|239754263 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239748801 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239740892 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239740718 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239740668 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|239513934 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 30.0 bits (66), Expect = 0.57 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 23 GWAPPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWP 59 G PPG KCC+ L GP G P PLA+ P P Sbjct: 249 GTCPPGPGGKCCMPL-GPPG-PPGGKPLAIGPGPRSP 283 >gi|149158690 HLA-B associated transcript-2 [Homo sapiens] Length = 2157 Score = 30.0 bits (66), Expect = 0.57 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 40 PRGCPDWPSPLAVPAAPYWPPTGPDDVSRKLASGKAV 76 P+ CP W SP A AP PPTGP S++ K + Sbjct: 1179 PQVCPGW-SPPAKSLAPKKPPTGPLPPSKEPLKEKLI 1214 >gi|27436927 synoviolin 1 isoform b [Homo sapiens] Length = 617 Score = 29.6 bits (65), Expect = 0.74 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 10/85 (11%) Query: 44 PDWPSPLAVPAAP----YWPPTGP-DDVSRKLASGKAVECLRFSAPELLTPQG-----YR 93 P++P L P P WPP GP V +SG+AV SA L P G Sbjct: 367 PNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGAATTTAA 426 Query: 94 GTLCRKGTGVLKGPVETFSAAASPS 118 GT + GP + A P+ Sbjct: 427 GTSATAASATASGPGSGSAPEAGPA 451 >gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens] Length = 1747 Score = 29.6 bits (65), Expect = 0.74 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 13/66 (19%) Query: 26 PPGRATKCCVELQGPRGCPDWPSPLAVPAAPYWPPTGPDDVSRKLASGKAVECLRFSAPE 85 PP A + C+ ++ +P+P PA P PP GP RKL S AV +F A + Sbjct: 450 PPPGAPRSCIRIRAR-----FPAP---PAPPAPPPRGP---KRKLYS--AVPGRKFIAVK 496 Query: 86 LLTPQG 91 +PQG Sbjct: 497 AHSPQG 502 >gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens] Length = 454 Score = 29.6 bits (65), Expect = 0.74 Identities = 13/25 (52%), Positives = 14/25 (56%) Query: 38 QGPRGCPDWPSPLAVPAAPYWPPTG 62 QGP P P+P A AAP PP G Sbjct: 27 QGPPSGPGQPAPAATQAAPQAPPAG 51 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.137 0.484 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,405,677 Number of Sequences: 37866 Number of extensions: 418557 Number of successful extensions: 1722 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 92 Number of HSP's that attempted gapping in prelim test: 1571 Number of HSP's gapped (non-prelim): 239 length of query: 133 length of database: 18,247,518 effective HSP length: 91 effective length of query: 42 effective length of database: 14,801,712 effective search space: 621671904 effective search space used: 621671904 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.