Guide to the Human Genome
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Name: LOC100292830 Sequence: fasta or formatted (305aa) NCBI GI: 239755412
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.0         52           3
 C cysteine            0.3          1           1
 D aspartate           6.6         20           2
 E glutamate           6.9         21           2
 F phenylalanine       0.7          2           1
 G glycine            13.1         40           2
 H histidine           5.6         17           1
 I isoleucine          2.0          6           1
 K lysine              0.7          2           1
 L leucine             9.2         28           2
 M methionine          0.3          1           1
 N asparagine          0.7          2           1
 P proline             5.2         16           2
 Q glutamine           5.9         18           1
 R arginine           10.5         32           2
 S serine              2.0          6           1
 T threonine           1.6          5           1
 V valine             10.5         32           1
 W tryptophan          1.0          3           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100294438          0.021   PREDICTED: hypothetical protein 
LOC100133889          0.019   PREDICTED: hypothetical protein 
HBA1                  0.012   alpha 1 globin 
LOC100293136          0.012   PREDICTED: hypothetical protein 
LOC100292157          0.012   PREDICTED: hypothetical protein 
LOC100134017          0.012   PREDICTED: hypothetical protein 
LOC100293233          0.012   PREDICTED: hypothetical protein 
LOC100290831          0.012   PREDICTED: hypothetical protein XP_002347799 
LOC100290926          0.012   PREDICTED: hypothetical protein XP_002347568 
LOC100291125          0.012   PREDICTED: hypothetical protein XP_002347660 
LOC100287562          0.012   PREDICTED: hypothetical protein XP_002343591 
LOC100288995          0.012   PREDICTED: hypothetical protein XP_002343379 
LOC100288349          0.012   PREDICTED: hypothetical protein XP_002342169 
HBA2                  0.012   alpha 2 globin 
LOC100128598          0.012   PREDICTED: hypothetical protein 
LOC100128598          0.012   PREDICTED: hypothetical protein 
C1orf77               0.012   small protein rich in arginine and glycine 
ADM2                  0.012   adrenomedullin 2 precursor 
LOC730183             0.012   PREDICTED: hypothetical protein 
LOC100128598          0.012   PREDICTED: hypothetical protein 
LOC728767             0.010   PREDICTED: hypothetical protein 
LOC728767             0.010   PREDICTED: hypothetical protein 
LOC728650             0.010   PREDICTED: hypothetical protein 
LOC100289978          0.009   PREDICTED: hypothetical protein XP_002348035 
CHMP1A                0.009   chromatin modifying protein 1A isoform 1 
ACBD5                 0.009   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.009   acyl-Coenzyme A binding domain containing 5 isoform...
PRX                   0.009   periaxin isoform 2 
RP1L1                 0.009   retinitis pigmentosa 1-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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