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Search of human proteins with 239755333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755333 PREDICTED: hypothetical protein [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755333 PREDICTED: hypothetical protein [Homo sapiens] 539 e-154
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.004
gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 36 0.031
gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 36 0.031
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 36 0.031
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 35 0.052
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 35 0.052
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 35 0.052
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 35 0.052
gi|117938759 GNAS complex locus XLas [Homo sapiens] 34 0.12
gi|18079216 CASK interacting protein 1 [Homo sapiens] 34 0.15
gi|5454106 TBP-related factor 10 [Homo sapiens] 34 0.15
gi|148727370 immediate early response 5-like [Homo sapiens] 34 0.15
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 34 0.15
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 33 0.20
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens] 33 0.26
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 33 0.34
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 33 0.34
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 32 0.44
gi|22779877 connexin 46 [Homo sapiens] 32 0.44
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 32 0.58
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 32 0.58
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 32 0.58
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 32 0.58
gi|169213640 PREDICTED: hypothetical protein [Homo sapiens] 32 0.58
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ... 32 0.58
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ... 32 0.58
>gi|239755333 PREDICTED: hypothetical protein [Homo sapiens]
Length = 267
Score = 539 bits (1389), Expect = e-154
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MGTRPDRVLSPPPQWIPYSEDGEDASGSQQLQAALVVGGAVLLVRIHHGHVEGAGLARRQ 60
MGTRPDRVLSPPPQWIPYSEDGEDASGSQQLQAALVVGGAVLLVRIHHGHVEGAGLARRQ
Sbjct: 1 MGTRPDRVLSPPPQWIPYSEDGEDASGSQQLQAALVVGGAVLLVRIHHGHVEGAGLARRQ 60
Query: 61 QLVLRGEGGQAQSQLGHTAASFAMNGFKALPASVLTQGLQGGLQPEVDLVLRLGLRRERV 120
QLVLRGEGGQAQSQLGHTAASFAMNGFKALPASVLTQGLQGGLQPEVDLVLRLGLRRERV
Sbjct: 61 QLVLRGEGGQAQSQLGHTAASFAMNGFKALPASVLTQGLQGGLQPEVDLVLRLGLRRERV 120
Query: 121 QRLLGLDEPRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRG 180
QRLLGLDEPRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRG
Sbjct: 121 QRLLGLDEPRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRG 180
Query: 181 EAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAA 240
EAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAA
Sbjct: 181 EAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAA 240
Query: 241 EPRASAAGTESRGTGWVMARAGGGGRQ 267
EPRASAAGTESRGTGWVMARAGGGGRQ
Sbjct: 241 EPRASAAGTESRGTGWVMARAGGGGRQ 267
>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 41.2 bits (95), Expect = 0.001
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 151 QGQLPSGFAAPGAPAWSGSEDTA-TGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHA 209
Q P+G APGAP G E GG G G A G A GG + G ++LS
Sbjct: 37 QSPPPAGPGAPGAPWRRGDEGPGPAGGEAGGPCGAAPGGCASGG-CGVMGVSLTVSLSFL 95
Query: 210 APYSAPAHPPA---GTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTGW 256
+ S+ PA +CS R R + A S P + G + G W
Sbjct: 96 SWSSSRCRVPARSSAASACSCRLRIFLRTASSELLPAIAPDGRRAGGLQW 145
>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 41.2 bits (95), Expect = 0.001
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 151 QGQLPSGFAAPGAPAWSGSEDTA-TGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHA 209
Q P+G APGAP G E GG G G A G A GG + G ++LS
Sbjct: 37 QSPPPAGPGAPGAPWRRGDEGPGPAGGEAGGPCGAAPGGCASGG-CGVMGVSLTVSLSFL 95
Query: 210 APYSAPAHPPA---GTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTGW 256
+ S+ PA +CS R R + A S P + G + G W
Sbjct: 96 SWSSSRCRVPARSSAASACSCRLRIFLRTASSELLPAIAPDGRRAGGLQW 145
>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 41.2 bits (95), Expect = 0.001
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 151 QGQLPSGFAAPGAPAWSGSEDTA-TGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHA 209
Q P+G APGAP G E GG G G A G A GG + G ++LS
Sbjct: 37 QSPPPAGPGAPGAPWRRGDEGPGPAGGEAGGPCGAAPGGCASGG-CGVMGVSLTVSLSFL 95
Query: 210 APYSAPAHPPA---GTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTGW 256
+ S+ PA +CS R R + A S P + G + G W
Sbjct: 96 SWSSSRCRVPARSSAASACSCRLRIFLRTASSELLPAIAPDGRRAGGLQW 145
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 39.3 bits (90), Expect = 0.004
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 144 RIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTA-LAGLAMGGT-------A 195
R P R + PS + G P+ + T + P G TA L GL+ + A
Sbjct: 333 RTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRA 392
Query: 196 SLTGRGCWINLSHAAPYSAPAHPPAGTR------SCSPRKRPVAKAAPSAAEPRASAAGT 249
S TG +L+ P ++P + T + SP + P +A+P+ PRAS GT
Sbjct: 393 SPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTP-PRASPTGTPPRASPTGT 451
Query: 250 ESRGT 254
SR +
Sbjct: 452 PSRAS 456
Score = 33.9 bits (76), Expect = 0.15
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 144 RIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCW 203
R P +L ++P + G P+ + P G +AL M TAS+T
Sbjct: 575 RTPSTVLLTRMPPSASPTGMPSRTS---------PTGMPSSALL-TKMDSTASITRTP-- 622
Query: 204 INLSHAAPYSAPAHPPAGTRSCSPRKRPVA---KAAPSAAEPRASAAGTESRGT 254
A+P P P A PR P +A+P+ PRAS GT SR +
Sbjct: 623 ---PRASPTETP--PRASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSRAS 671
>gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 36.2 bits (82), Expect = 0.031
Identities = 43/158 (27%), Positives = 58/158 (36%), Gaps = 34/158 (21%)
Query: 128 EPRQVGQELGLLAGHHRIPLRLLQGQLPSG------------FAAPGAPAWSGSEDTATG 175
+P+ + Q L L G PL G+ G + PG P SE +A
Sbjct: 6 QPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLPCPLLPSYHCPGVP----SEASAGS 61
Query: 176 GCPR----------------GEAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPP 219
G PR G+ G L L G A+L +GC + A AP
Sbjct: 62 GTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKW 121
Query: 220 A--GTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTG 255
A G + SP KRP A+ AE + + S G+G
Sbjct: 122 AEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSG 159
>gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 36.2 bits (82), Expect = 0.031
Identities = 43/158 (27%), Positives = 58/158 (36%), Gaps = 34/158 (21%)
Query: 128 EPRQVGQELGLLAGHHRIPLRLLQGQLPSG------------FAAPGAPAWSGSEDTATG 175
+P+ + Q L L G PL G+ G + PG P SE +A
Sbjct: 6 QPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLPCPLLPSYHCPGVP----SEASAGS 61
Query: 176 GCPR----------------GEAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPP 219
G PR G+ G L L G A+L +GC + A AP
Sbjct: 62 GTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKW 121
Query: 220 A--GTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTG 255
A G + SP KRP A+ AE + + S G+G
Sbjct: 122 AEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSG 159
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 36.2 bits (82), Expect = 0.031
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 181 EAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAA 240
+A A AGL +A+ S AA AP P G+ CS +++A +AA
Sbjct: 345 QAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAP--PSGGSAPCSCLSCHSSQSAAAAA 402
Query: 241 EPRASAAGTESRGTGWVMARAGGGG 265
A+A G+ G G GGGG
Sbjct: 403 AAAAAALGSRGGGGGGGGGGGGGGG 427
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 35.4 bits (80), Expect = 0.052
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 129 PRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWS-GSEDTATGGCPRGEAGTALA 187
P Q + L L R P R L + G AA G PA S G T C T+ A
Sbjct: 84 PAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGPLKRVTWTCAVRRLWTSWA 143
Query: 188 GLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAA 247
GGT + R P H PAG S + R R +A A P A
Sbjct: 144 WALRGGTDPVLDR---------RQQLTPRHRPAGETSGARRARGELQA--WGAWPTWCGA 192
Query: 248 GTESRGTG 255
G RG G
Sbjct: 193 GRGRRGRG 200
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 35.4 bits (80), Expect = 0.052
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 129 PRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWS-GSEDTATGGCPRGEAGTALA 187
P Q + L L R P R L + G AA G PA S G T C T+ A
Sbjct: 84 PAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGPLKRVTWTCAVRRLWTSWA 143
Query: 188 GLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAA 247
GGT + R P H PAG S + R R +A A P A
Sbjct: 144 WALRGGTDPVLDR---------RQQLTPRHRPAGETSGARRARGELQA--WGAWPTWCGA 192
Query: 248 GTESRGTG 255
G RG G
Sbjct: 193 GRGRRGRG 200
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 35.4 bits (80), Expect = 0.052
Identities = 76/271 (28%), Positives = 90/271 (33%), Gaps = 58/271 (21%)
Query: 53 GAGLARRQQLVLRGEGGQ-AQSQLGHTAASFAMNGFKALPASVLTQGLQG-GLQPEVDLV 110
G+G RR L G Q ++ L TA +G A+VL + L G GL V
Sbjct: 356 GSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRR 415
Query: 111 LRLGLRRERVQRLLGLDEPR-QVG-------QELGLLAGHHRIPLRLLQGQLPSGFAAP- 161
+ + R R G PR QVG GLL G + LR G L G A
Sbjct: 416 VHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQL 475
Query: 162 ------------GAPAWSGSEDTATGGCPRG-EAGTALAGLAMG-GTASLTGR--GCWIN 205
GAP E GC G AG LAG + G L GR G +
Sbjct: 476 EGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVR 535
Query: 206 LSHAAPYSA----------------------PAHPP--AGTRSCSPRKRPVAKAAPSAAE 241
P+ P P AG R P +A A P A
Sbjct: 536 GGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIAR 595
Query: 242 -------PRASAAGTESRGTGWVMARAGGGG 265
PRA G R G + AGGGG
Sbjct: 596 LGCDLDGPRALVEGLHGRHEGGPLGGAGGGG 626
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 35.4 bits (80), Expect = 0.052
Identities = 76/271 (28%), Positives = 90/271 (33%), Gaps = 58/271 (21%)
Query: 53 GAGLARRQQLVLRGEGGQ-AQSQLGHTAASFAMNGFKALPASVLTQGLQG-GLQPEVDLV 110
G+G RR L G Q ++ L TA +G A+VL + L G GL V
Sbjct: 356 GSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRR 415
Query: 111 LRLGLRRERVQRLLGLDEPR-QVG-------QELGLLAGHHRIPLRLLQGQLPSGFAAP- 161
+ + R R G PR QVG GLL G + LR G L G A
Sbjct: 416 VHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQL 475
Query: 162 ------------GAPAWSGSEDTATGGCPRG-EAGTALAGLAMG-GTASLTGR--GCWIN 205
GAP E GC G AG LAG + G L GR G +
Sbjct: 476 EGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVR 535
Query: 206 LSHAAPYSA----------------------PAHPP--AGTRSCSPRKRPVAKAAPSAAE 241
P+ P P AG R P +A A P A
Sbjct: 536 GGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIAR 595
Query: 242 -------PRASAAGTESRGTGWVMARAGGGG 265
PRA G R G + AGGGG
Sbjct: 596 LGCDLDGPRALVEGLHGRHEGGPLGGAGGGG 626
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 34.3 bits (77), Expect = 0.12
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Query: 159 AAPGAPAWSGSEDTATGGCPRG-EAGTALAGLAMGGTASLTGRGCWINL-----SHAAPY 212
AAP APA D +G P ++GTA A G A+ G S AAP
Sbjct: 394 AAPAAPA-----DPDSGATPEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAP- 447
Query: 213 SAPAHPPAGTRSCSPRK-----RPVAKAAPSAAEPRASAAGTESRGTGWVMARAGGGGR 266
APA P +G +P P A AAP+AAE RA+ + G A A R
Sbjct: 448 DAPADPDSGAAPDAPADPDAGAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATR 506
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 33.9 bits (76), Expect = 0.15
Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 21/121 (17%)
Query: 149 LLQGQLPSGFAAPGAPAW-----------SGSEDTATGGCPRGEAGTALAGLAMGGTASL 197
L QG SG +AP W SGS GG RG G AL G L
Sbjct: 359 LPQGSSSSGPSAPPEEIWVLRKPFAGGDRSGSISGMAGG--RGSGGHALHA-GSEGVKLL 415
Query: 198 TGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAA-------PSAAEPRASAAGTE 250
++S + P +PA PP G+ + + PVA A P EP + +E
Sbjct: 416 ATVLSQKSVSESGPGDSPAKPPEGSAGVARSQPPVAHAGQVYGEQPPKKLEPASEGKSSE 475
Query: 251 S 251
+
Sbjct: 476 A 476
>gi|5454106 TBP-related factor 10 [Homo sapiens]
Length = 218
Score = 33.9 bits (76), Expect = 0.15
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 207 SHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGT--------ESRGTGWVM 258
S A P +APA + P P A + +AAE +AS AGT + GTG +
Sbjct: 6 SGADPEAAPASAASAPGPAPPVSAPAALPSSTAAENKASPAGTAGGPGAGAAAGGTGPLA 65
Query: 259 ARAG 262
ARAG
Sbjct: 66 ARAG 69
Score = 31.6 bits (70), Expect = 0.76
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 152 GQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGR-GCWINLSHAA 210
G P A P+ + +E+ A+ P G AG AG A GGT L R G AA
Sbjct: 22 GPAPPVSAPAALPSSTAAENKAS---PAGTAGGPGAGAAAGGTGPLAARAGEPAERRGAA 78
Query: 211 PYSA-PAHPPAGTRS 224
P SA A PP G S
Sbjct: 79 PVSAGGAAPPEGAIS 93
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 33.9 bits (76), Expect = 0.15
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 19/89 (21%)
Query: 178 PRGEAGTALAGLAMGGTASLTGR-GCW-INLSHAAPYSA---------------PAHPPA 220
PRG A A AG GG +L+ GC + H AP+ P PPA
Sbjct: 134 PRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPA 193
Query: 221 GTRSC--SPRKRPVAKAAPSAAEPRASAA 247
C PR A P AA P A+A+
Sbjct: 194 PAALCPRDPRAPAACSAPPGAAPPAAAAS 222
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 33.9 bits (76), Expect = 0.15
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 146 PLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWIN 205
P R Q QLP P GSE CP A + + GL+ GG+ R
Sbjct: 525 PERKQQPQLPR------PPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRR-PPRSPERT 577
Query: 206 LSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTG 255
LS ++ YS+ +GT + P+ A+P A+P T R G
Sbjct: 578 LSPSSGYSS----QSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPG 623
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 33.5 bits (75), Expect = 0.20
Identities = 38/121 (31%), Positives = 44/121 (36%), Gaps = 27/121 (22%)
Query: 159 AAPGAPAWSGS--EDTATGGCP----------RGEAGTALAGLAMGGTASLTGRGCWINL 206
A G W G ED G P R AL G A+G A+L L
Sbjct: 208 AGAGGLGWGGRGYEDYRRSGPPAPLALSTCVVRFAKTGALRGAALGPPAALPAP-----L 262
Query: 207 SHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESRGTGWVMARAGG-GG 265
+ AAP + PA PP G P +AP+ A P A A RA G GG
Sbjct: 263 TEAAPPAPPARPPPG---------PGPSSAPAKASPEAEEAARCVHCRALFRRRADGRGG 313
Query: 266 R 266
R
Sbjct: 314 R 314
>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
Length = 504
Score = 33.1 bits (74), Expect = 0.26
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 139 LAGHHRIPLRLL---QGQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAM---- 191
L H+ P L + P +PG A S + GCP G GT GL M
Sbjct: 401 LRAHYDTPRSLCLAPRDHSPPSQGSPGNSAARDSGGQTSAGCPSGWLGTRRRGLVMEAPQ 460
Query: 192 GGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSC 225
G A+L G P++ P PPA +C
Sbjct: 461 GSEATLPGPAPGEPWEAGGPHAGP--PPAFFSAC 492
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 32.7 bits (73), Expect = 0.34
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 145 IPLRLLQGQLPSGFAAPGAPAWSG--SEDTATGGCPRGEAGTALAGLAMGGTASLTGRGC 202
+PL+L G +G AAP +P G SE + G PR + + GRG
Sbjct: 227 LPLQLRAGGASTGLAAP-SPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGY 285
Query: 203 WINLSHAAPYSAPAHPPAGTRS 224
L +P++APA P RS
Sbjct: 286 QQRLPSRSPHAAPAAPAPALRS 307
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
sapiens]
Length = 2365
Score = 32.7 bits (73), Expect = 0.34
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 162 GAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAG 221
G A EDT GG G+ L G + G + R S P+S P +
Sbjct: 201 GDAAGQKKEDTGGGGRSAGQHWARLRGES--GLSLERHRSTLTQASSMTPHSGPR---ST 255
Query: 222 TRSCSPRKRPVAKAAPSAAEPRASA 246
T SP +R A+AA + PRAS+
Sbjct: 256 TSQASPAQRDTAQAASTREIPRASS 280
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 32.3 bits (72), Expect = 0.44
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 19/128 (14%)
Query: 140 AGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTG 199
A R+P LL P G PGAP A G +G + G A +A+ +
Sbjct: 30 APRQRVPALLLPPGPPVGGGGPGAP--PSPPAVAAAAAAAGSSGAGVPGGAAAASAASSS 87
Query: 200 RGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAP--SAAEPRASAAGTESRGTGWV 257
+ S ++ S PA + + P AA ++A GT R V
Sbjct: 88 SASSSSSSSSSASSGPA---------------LLRVGPGFDAALQVSAAIGTNLRRFRAV 132
Query: 258 MARAGGGG 265
+GGGG
Sbjct: 133 FGESGGGG 140
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 32.3 bits (72), Expect = 0.44
Identities = 34/132 (25%), Positives = 45/132 (34%), Gaps = 3/132 (2%)
Query: 122 RLLGLDEPRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTATGGCPRGE 181
+LL L E R GQ L GHH + + + P A + T P G
Sbjct: 298 KLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQPPALKAYPAASTPAAPSPVGS 357
Query: 182 AGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAE 241
+ LA A G A L G +L +A P + + +P P
Sbjct: 358 SSPPLAHEAEAGAAPLLLDGSGSSLEGSALAGTPEEEEQAVTTAAQMHQP---PLPLGDP 414
Query: 242 PRASAAGTESRG 253
RAS A S G
Sbjct: 415 GRASKASRASSG 426
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 32.0 bits (71), Expect = 0.58
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 153 QLPSGFAAPGAPAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHAAPY 212
Q P G A PG GS D A G P G GT A A +L G AP
Sbjct: 34 QNPPGPAPPGG----GSSDAA-GKPPAGALGTPAAAAANELNNNLPG---------GAP- 78
Query: 213 SAPAHPPAGTRSCSPRKRPVAKAAP----SAAEPRASAA 247
+APA P G +C+ + +AAP S EP A++A
Sbjct: 79 AAPAVPGPGGVNCAVGSAMLTRAAPGPRRSEDEPPAASA 117
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 194 TASLTGRGCWINLSHAAPYSAPA-HPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESR 252
+ S + G + S A AP+ PPA + R P+A AA +AA ++ G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 253 GTGWVMARAGGGG 265
G+G +G GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 194 TASLTGRGCWINLSHAAPYSAPA-HPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESR 252
+ S + G + S A AP+ PPA + R P+A AA +AA ++ G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 253 GTGWVMARAGGGG 265
G+G +G GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 194 TASLTGRGCWINLSHAAPYSAPA-HPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESR 252
+ S + G + S A AP+ PPA + R P+A AA +AA ++ G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 253 GTGWVMARAGGGG 265
G+G +G GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 32.0 bits (71), Expect = 0.58
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 215 PAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAAG--TESRGTGWVMARAGGG 264
P PP + SPR +P S AEP A RG W+ A GGG
Sbjct: 77 PRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGG 128
>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
sapiens]
Length = 220
Score = 32.0 bits (71), Expect = 0.58
Identities = 27/88 (30%), Positives = 30/88 (34%), Gaps = 7/88 (7%)
Query: 167 SGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCS 226
S +E TGGCP G G A RG AP A P G R
Sbjct: 8 SSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARG-------IAPSLARWRPAFGERDQQ 60
Query: 227 PRKRPVAKAAPSAAEPRASAAGTESRGT 254
P RP A A R + A + GT
Sbjct: 61 PPARPGVSGAAGWARGRGADATQGAAGT 88
>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
sapiens]
Length = 220
Score = 32.0 bits (71), Expect = 0.58
Identities = 27/88 (30%), Positives = 30/88 (34%), Gaps = 7/88 (7%)
Query: 167 SGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWINLSHAAPYSAPAHPPAGTRSCS 226
S +E TGGCP G G A RG AP A P G R
Sbjct: 8 SSAEVVLTGGCPLGWCSAVERGQVAPLNAPQRARG-------IAPSLARWRPAFGERDQQ 60
Query: 227 PRKRPVAKAAPSAAEPRASAAGTESRGT 254
P RP A A R + A + GT
Sbjct: 61 PPARPGVSGAAGWARGRGADATQGAAGT 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,258,759
Number of Sequences: 37866
Number of extensions: 636292
Number of successful extensions: 3962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 3721
Number of HSP's gapped (non-prelim): 378
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.