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Search of human proteins with 239755142
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 448 e-126
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 324 3e-89
gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ... 324 3e-89
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 4e-04
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ... 41 0.001
gi|23821044 zinc finger/RING finger 2 [Homo sapiens] 41 0.001
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 40 0.002
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 40 0.002
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239754931 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 39 0.003
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 39 0.005
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 39 0.005
gi|153792074 proline rich 12 [Homo sapiens] 39 0.005
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 38 0.006
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 38 0.006
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 38 0.006
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 38 0.008
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 448 bits (1153), Expect = e-126
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRP 180
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRP
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRP 180
Query: 181 WQGSWGRLLSHRAAEHPHPVQESLPRFSNILIGAREGND 219
WQGSWGRLLSHRAAEHPHPVQESLPRFSNILIGAREGND
Sbjct: 181 WQGSWGRLLSHRAAEHPHPVQESLPRFSNILIGAREGND 219
>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 324 bits (831), Expect = 3e-89
Identities = 165/179 (92%), Positives = 165/179 (92%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAAD S PR AA R
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALR 179
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 25 PGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSR----ERRETMEGKGGWSAA 80
P R RR L AG + GG AG R P + S R W
Sbjct: 110 PARRCSARRPRLHQGGAG-RLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGG 168
Query: 81 LGSLPPPPAAACTALKPATRRGSCSAPLGP 110
L PP PAA L PA RR + S GP
Sbjct: 169 LPR-PPAPAALRLLLPPAPRRRARSWACGP 197
>gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
sapiens]
Length = 217
Score = 324 bits (831), Expect = 3e-89
Identities = 165/179 (92%), Positives = 165/179 (92%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAAD S PR AA R
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALR 179
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 25 PGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSR----ERRETMEGKGGWSAA 80
P R RR L AG + GG AG R P + S R W
Sbjct: 110 PARRCSARRPRLHQGGAG-RLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGG 168
Query: 81 LGSLPPPPAAACTALKPATRRGSCSAPLGP 110
L PP PAA L PA RR + S GP
Sbjct: 169 LPR-PPAPAALRLLLPPAPRRRARSWACGP 197
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.0 bits (97), Expect = 4e-04
Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 12/168 (7%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRA----GRRAEPPEPSYSRERRETM 71
+RGR R P R R + + A G R+ GR P P +SR R
Sbjct: 491 KRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 72 EGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAA 131
G+ + S PA + R S PARR S R + R A
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPA 610
Query: 132 GGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
+ R+P R + + SP+ R RS + P RR G + R
Sbjct: 611 RRGRS-RSRTPARRRSRTRSPVRR-------RSRSRSPARRSGRSRSR 650
Score = 35.8 bits (81), Expect = 0.029
Identities = 46/172 (26%), Positives = 58/172 (33%), Gaps = 23/172 (13%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKG 75
RRGR R P R GR + A G + R R+ P SR R G+
Sbjct: 558 RRGRSHSRSPATR--GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS 615
Query: 76 G--WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGG 133
A S P + + RR S PARR +R + G R
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Query: 134 AEAGERRS-------------PNRGATSSLSPIARGAADTGVRSAAEDPPRR 172
+G RS P RG + S S + RG RS + P RR
Sbjct: 676 RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG------RSHSRTPQRR 721
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 40.8 bits (94), Expect = 0.001
Identities = 52/188 (27%), Positives = 64/188 (34%), Gaps = 22/188 (11%)
Query: 5 PSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGR-RAGRRAEPPEPSY 63
P++P ++ P R R P LRS R A GA+ R RA R P
Sbjct: 213 PTAPPARVREPGRAEGASREPRLRSRAARPP--PAPGPGALSRASRSRAAGRPGPGFHGG 270
Query: 64 SRERRETMEGKGGW--SAALGSLPPPPAAACTA------LKPATRRGSCS--------AP 107
+ G GG ALG PP A A RRG C A
Sbjct: 271 EKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPAT 330
Query: 108 LGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSL-SPIARGAADTGVRSAA 166
G RC R R +GG G A G P R + + + R + G R
Sbjct: 331 SGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGL 390
Query: 167 E--DPPRR 172
+ PPRR
Sbjct: 391 QLTPPPRR 398
>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 40.8 bits (94), Expect = 0.001
Identities = 57/201 (28%), Positives = 71/201 (35%), Gaps = 29/201 (14%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRE----RRETM 71
RR RG R R E R G A G GG GR + P S + R+ T
Sbjct: 12 RRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATS 71
Query: 72 EGKGG-----WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGA 126
G WS+ GS A P +RG GP C A+RP A
Sbjct: 72 SGSVPVLSVLWSSVSGS--DGKAVRLNGAGPRPKRG------GPW--CGAKRP---SQSA 118
Query: 127 GRLAAGGAEAGERRSPN-------RGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
R AA + +P R ++SS P A G D GV + D P + A R
Sbjct: 119 ERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAAR 178
Query: 180 PWQGSWGRLLSHRAAEHPHPV 200
+ GR A P P+
Sbjct: 179 RQRLGPGRRELLMARSFPDPI 199
>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
sapiens]
Length = 261
Score = 40.8 bits (94), Expect = 0.001
Identities = 57/201 (28%), Positives = 71/201 (35%), Gaps = 29/201 (14%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRE----RRETM 71
RR RG R R E R G A G GG GR + P S + R+ T
Sbjct: 12 RRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATS 71
Query: 72 EGKGG-----WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGA 126
G WS+ GS A P +RG GP C A+RP A
Sbjct: 72 SGSVPVLSVLWSSVSGS--DGKAVRLNGAGPRPKRG------GPW--CGAKRP---SQSA 118
Query: 127 GRLAAGGAEAGERRSPN-------RGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
R AA + +P R ++SS P A G D GV + D P + A R
Sbjct: 119 ERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAAR 178
Query: 180 PWQGSWGRLLSHRAAEHPHPV 200
+ GR A P P+
Sbjct: 179 RQRLGPGRRELLMARSFPDPI 199
>gi|23821044 zinc finger/RING finger 2 [Homo sapiens]
Length = 242
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/149 (29%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 38 AAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKP 97
A ++G A G RA ++ P S G G +AA G PA +A +P
Sbjct: 3 AKQSGPAAANGRTRAYSGSDLPSSSSGGANGTAGGGGGARAAAAGRF---PAQVPSAHQP 59
Query: 98 ATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGA 157
+ G+ +A PA + R L GGA A GA A + SP SS P
Sbjct: 60 SASGGAAAAAAAPAAPAAPRSRSL--GGAVGSVASGARAAQ--SPFSIPNSSSGPY---- 111
Query: 158 ADTGVRSAAEDPPRRDGIAADRPWQGSWG 186
G + + P G DRP GS G
Sbjct: 112 ---GSQDSVHSSPEDGGGGRDRPVGGSPG 137
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/187 (28%), Positives = 68/187 (36%), Gaps = 51/187 (27%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKG 75
R+GR G RP R+GL AG RA+P + S S ++ + G
Sbjct: 240 RKGREGPSRP-------RRGLQGTAAGRV----------RADPDDASLSTDKPQRGTG-- 280
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCS----------APLGPARRCSARRP------ 119
G L P A A T A GS + AP GP C RRP
Sbjct: 281 ------GPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQ 334
Query: 120 --RLHQG---GAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRS---AAEDPPR 171
R H+G G R+ A A+A + R + P R + G RS A P +
Sbjct: 335 RRRSHEGRARGRHRVEADAADAAPTAAARRAGRA--RPRGRRHREHGTRSDARAVAAPGQ 392
Query: 172 RDGIAAD 178
R G D
Sbjct: 393 RRGDTED 399
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/187 (28%), Positives = 68/187 (36%), Gaps = 51/187 (27%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKG 75
R+GR G RP R+GL AG RA+P + S S ++ + G
Sbjct: 240 RKGREGPSRP-------RRGLQGTAAGRV----------RADPDDASLSTDKPQRGTG-- 280
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCS----------APLGPARRCSARRP------ 119
G L P A A T A GS + AP GP C RRP
Sbjct: 281 ------GPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQ 334
Query: 120 --RLHQG---GAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRS---AAEDPPR 171
R H+G G R+ A A+A + R + P R + G RS A P +
Sbjct: 335 RRRSHEGRARGRHRVEADAADAAPTAAARRAGRA--RPRGRRHREHGTRSDARAVAAPGQ 392
Query: 172 RDGIAAD 178
R G D
Sbjct: 393 RRGDTED 399
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/187 (28%), Positives = 68/187 (36%), Gaps = 51/187 (27%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKG 75
R+GR G RP R+GL AG RA+P + S S ++ + G
Sbjct: 240 RKGREGPSRP-------RRGLQGTAAGRV----------RADPDDASLSTDKPQRGTG-- 280
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCS----------APLGPARRCSARRP------ 119
G L P A A T A GS + AP GP C RRP
Sbjct: 281 ------GPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQ 334
Query: 120 --RLHQG---GAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRS---AAEDPPR 171
R H+G G R+ A A+A + R + P R + G RS A P +
Sbjct: 335 RRRSHEGRARGRHRVEADAADAAPTAAARRAGRA--RPRGRRHREHGTRSDARAVAAPGQ 392
Query: 172 RDGIAAD 178
R G D
Sbjct: 393 RRGDTED 399
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 40.0 bits (92), Expect = 0.002
Identities = 53/162 (32%), Positives = 61/162 (37%), Gaps = 32/162 (19%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAV--LGGG--RRAGRRAEPPEPSYSRERRETM 71
R G RG GL G R+ + AA GGA L G R A RR P + R R
Sbjct: 108 RGGGRGWEGGGL---GARRAVTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESR- 163
Query: 72 EGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAA 131
SAAL S P + +AP PA R R + Q G
Sbjct: 164 ------SAALAS----PRVS-------------NAPTTPASRNPGLRAQERQSGRRAAGG 200
Query: 132 GGAEAGERR-SPNRGATSSLSPIARGAADTGVRSAAEDPPRR 172
GGA A R P R A S +R AA G R+ PP R
Sbjct: 201 GGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPR 242
Score = 30.8 bits (68), Expect = 0.94
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 17/79 (21%)
Query: 23 RRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSR-------ERRETMEGKG 75
R PGLR++ R+ G AA GGA RAEPP R R G G
Sbjct: 182 RNPGLRAQERQSGRRAAGGGGA----------RAEPPRVPPCRPAGCSGGNRSRRAAGAG 231
Query: 76 GWSAALGSLPPPPAAACTA 94
+ P PP A A
Sbjct: 232 PRTTRRKPPPRPPGTAPAA 250
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 40.0 bits (92), Expect = 0.002
Identities = 53/171 (30%), Positives = 63/171 (36%), Gaps = 20/171 (11%)
Query: 17 RGRRGERRPGLRSEGRRKG--------LLAAEAG--GAVLGGGR-RAGRRAEPPEPSYS- 64
R R G R PG + G R+G L A G G+VL R R G R P P+
Sbjct: 32 RERHGPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARC 91
Query: 65 ---RERRETMEGK--GGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRP 119
R R T + GG+ A GS P P A G + + A+R
Sbjct: 92 LPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGG 151
Query: 120 RLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPP 170
R H GG G GG R P R AA+T R AA PP
Sbjct: 152 RSHPGGPGSPRGGGTVGPGDRGPAAADGGRPQRTVR-AAET--RGAAAAPP 199
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.002
Identities = 49/160 (30%), Positives = 58/160 (36%), Gaps = 19/160 (11%)
Query: 24 RPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGS 83
RP R E G V + G EP P RRE G GG SA LG
Sbjct: 23 RPAARGEEADGGREKMGWAQVVKNLAEKKGEFREPRPP-----RREEESGGGGGSAGLGG 77
Query: 84 LPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPN 143
P AA P RG P G RR + R G AEAG R+
Sbjct: 78 -PAGLAAPDLGDFPPAGRGD---PKG------RRRDPAGEAVDPRKKKGAAEAGRRKKAE 127
Query: 144 RGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRPWQG 183
A + +P G A+ AAE P + + AA P +G
Sbjct: 128 AAAAAMATPARPGEAE----DAAERPLQDEPAAAAGPGKG 163
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.002
Identities = 55/179 (30%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 16 RRGRRGERRPGLRSEGRRKGL-------------LAAEAGGAVL---GGGRRAGRRA--E 57
R+GR E R LR G+R+G L A GGA GG+ A R +
Sbjct: 130 RKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQ 189
Query: 58 PPEPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSAR 117
P P+++ R +GG A S PP A + +P RR + LG A R + R
Sbjct: 190 PGLPTHAALRGGGGGSEGGGGGARPS--PPRARQPPSGRPRPRR---TRLLGSAERHTGR 244
Query: 118 RPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIA 176
G R A A S RGA +S+S AR R A R DG A
Sbjct: 245 AALARHGQLSRPHA----AVRNSSRGRGAATSVSAAAR-----PTRGGARGHRRADGRA 294
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.002
Identities = 55/179 (30%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 16 RRGRRGERRPGLRSEGRRKGL-------------LAAEAGGAVL---GGGRRAGRRA--E 57
R+GR E R LR G+R+G L A GGA GG+ A R +
Sbjct: 130 RKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQ 189
Query: 58 PPEPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSAR 117
P P+++ R +GG A S PP A + +P RR + LG A R + R
Sbjct: 190 PGLPTHAALRGGGGGSEGGGGGARPS--PPRARQPPSGRPRPRR---TRLLGSAERHTGR 244
Query: 118 RPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIA 176
G R A A S RGA +S+S AR R A R DG A
Sbjct: 245 AALARHGQLSRPHA----AVRNSSRGRGAATSVSAAAR-----PTRGGARGHRRADGRA 294
>gi|239754931 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/113 (31%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAE 135
GW A+ SL P P + ++ RRG A R + PRLH G GRL
Sbjct: 4 GWLTAVASLLPSPGNSELPVQALGRRGGRDWARNEAGRDLEKPPRLHCSGRGRLE----- 58
Query: 136 AGERRSPN--------RGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRP 180
E PN RG+ S R TG R+ P R D IA P
Sbjct: 59 --EPVPPNHLPVGLSVRGSQVLSSAGPRRCRLTGTRNPVRGPRRVDQIARGGP 109
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 38.9 bits (89), Expect = 0.003
Identities = 46/164 (28%), Positives = 56/164 (34%), Gaps = 13/164 (7%)
Query: 43 GAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLP----PPPAAACTALKPA 98
G G R +G R+ P + G G S A G P PP +
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Query: 99 TRRGSCSAPLGPARRCSARRPR---LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIAR 155
+ + +AP PAR + PR QG GR A G RR R + SS S R
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405
Query: 156 GAADTGVRSAAEDPPRRDGIAADRPWQGSWGRLLSHRAAEHPHP 199
G R PPR + R S S R A P P
Sbjct: 406 ----RGRRRPRPAPPRGSSRSLSRARSSSDSG--SGRGAPGPGP 443
Score = 33.9 bits (76), Expect = 0.11
Identities = 52/191 (27%), Positives = 65/191 (34%), Gaps = 23/191 (12%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
P RG+ P RS +G AGGA G RR RR S S RR
Sbjct: 354 PTPPARGKESPSPRSAPSSQGRGGRAAGGA--GRRRRRRRRRRRSRSSASAPRRR----- 406
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGA 134
P PP + +L A R S + G P +G G G
Sbjct: 407 ----GRRRPRPAPPRGSSRSLSRA--RSSSDSGSGRGAPGPGPEPGSERGHGGH----GK 456
Query: 135 EAGERRSPNRGATSSLSPIARG--AADTGVRSAAEDPPRRDGIAADRPWQGSWGRLLSHR 192
A ER R A++S SP A G G S+ P ++ R S + S
Sbjct: 457 RAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSR----SPSKSRSRS 512
Query: 193 AAEHPHPVQES 203
A + PH S
Sbjct: 513 AEKRPHSPSRS 523
Score = 32.7 bits (73), Expect = 0.25
Identities = 48/180 (26%), Positives = 62/180 (34%), Gaps = 29/180 (16%)
Query: 17 RGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGG 76
RG R G R RR+ + + A GRR R A P S S R + G
Sbjct: 375 RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 77 WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLH-------QGGAGRL 129
A G P P GS G +R R PR G GR
Sbjct: 435 GRGAPGPGPEP--------------GSERGHGGHGKRAKERPPRARPASTSPSPGAHGR- 479
Query: 130 AAGGAEA-GERRSPN---RGATSSLSP--IARGAADTGVRSAAEDPPRRDGIAADRPWQG 183
GG E RSP R +SS SP +A+ S + P + ++ D+ +G
Sbjct: 480 -RGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEG 538
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 38.5 bits (88), Expect = 0.005
Identities = 54/179 (30%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 16 RRGRRGERRPGLRSEGRRKGL-------------LAAEAGGAVL---GGGRRAGRRA--E 57
R+GR E R +R G+R+G L A GGA GG+ A R +
Sbjct: 130 RKGRLREGRGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQ 189
Query: 58 PPEPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSAR 117
P P+++ R +GG A S PP A + +P RR + LG A R + R
Sbjct: 190 PGLPTHAALRGGGGGSEGGGGGARPS--PPRARQPPSGRPRPRR---TRLLGSAERHTGR 244
Query: 118 RPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIA 176
G R A A S RGA +S+S AR R A R DG A
Sbjct: 245 AALARHGQLSRPHA----AVRNSSRGRGAATSVSAAAR-----PTRGGARGHRRADGRA 294
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 38.5 bits (88), Expect = 0.005
Identities = 47/172 (27%), Positives = 64/172 (37%), Gaps = 11/172 (6%)
Query: 11 KLNFPRRGRRGE----RRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRE 66
K P RGR G+ R RS RR A G+ + R R +P R
Sbjct: 91 KAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPR--RR 148
Query: 67 RRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGA 126
++ + +GG A A KP RRG +A G + A + GG
Sbjct: 149 GQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR-RRGERAAAAGGKKLQKAAAAKSRGGGG 207
Query: 127 GRLAAGGAEAGERRSPNRGATS----SLSPIARGAADTGVRSAAEDPPRRDG 174
+ AA G + RR + A S + AA TGV+S + P R G
Sbjct: 208 KKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGG 259
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/120 (32%), Positives = 45/120 (37%), Gaps = 12/120 (10%)
Query: 35 GLLAAEAGGAVLGGGRR-----AGRRAEPPEPSYSR--ERRETMEGKGGWSAALGSLPPP 87
GL EA A G R A + + P PSY +E E G S P P
Sbjct: 974 GLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAP 1033
Query: 88 PAAACTALKP-----ATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSP 142
PAAA TA+ P A S AP R +P L G G GGA G +P
Sbjct: 1034 PAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAP 1093
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 18/88 (20%)
Query: 85 PPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQG----GAGRLAAG-------- 132
PPPP + PA R AP P R S R R +G G LA G
Sbjct: 909 PPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLADGFHRYYGPI 968
Query: 133 -----GAEAGERRSPNRGATS-SLSPIA 154
G GE R+ RGA LSP A
Sbjct: 969 EPQGLGLGLGEARAAPRGAAGRPLSPPA 996
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.5 bits (88), Expect = 0.005
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 30/118 (25%)
Query: 29 SEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALG--SLPP 86
+ GR G AA GGA GGG G R P Y GKGG+ AA G + PP
Sbjct: 358 ASGRATGPEAAGGGGAGGGGG---GYRPIIQSPGYKT-------GKGGYGAAAGGATRPP 407
Query: 87 PPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNR 144
PP + T C + GPA + G+ + G G+ SP +
Sbjct: 408 PPRSTATP--------KCQSLGGPAAAYA----------TGKASGAGGAGGQAYSPGQ 447
Score = 29.6 bits (65), Expect = 2.1
Identities = 39/148 (26%), Positives = 50/148 (33%), Gaps = 36/148 (24%)
Query: 29 SEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPP 88
S G+ +GLL +A G GGG+ + PSYS GG PPP
Sbjct: 444 SPGQPQGLLGPQAYGQGFGGGQ---AQDLSKAPSYS----------GGPPQPPSGPPPPG 490
Query: 89 AAACTALKPATRRGSC--------SAPLGPARRCSARRPRL------------HQGGAGR 128
A C + P +G P ++ P L H GG G
Sbjct: 491 LATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGP 550
Query: 129 LAAGGAEAGERRSPNRGATSSLSPIARG 156
+ GG G SP+ SP A G
Sbjct: 551 SSLGG---GGEASPSHIIRPLQSPPATG 575
Score = 28.1 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 57 EPPEPSYSRERRETMEGKGGWSAALGSLPP-PPAAACTALKPATRRG 102
EP PS E+++ G LG+L P PPA T + P G
Sbjct: 860 EPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEG 906
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 38.1 bits (87), Expect = 0.006
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
M P SP + PR R L S G G L A GGAV GGG R G RAE +
Sbjct: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQG-RAEAHK 139
Query: 61 PSYSRERRETMEG-------KGGW 77
+ +R M GGW
Sbjct: 140 EVFPGQRVGKMAAPMELFCWSGGW 163
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 38.1 bits (87), Expect = 0.006
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
M P SP + PR R L S G G L A GGAV GGG R G RAE +
Sbjct: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQG-RAEAHK 139
Query: 61 PSYSRERRETMEG-------KGGW 77
+ +R M GGW
Sbjct: 140 EVFPGQRVGKMAAPMELFCWSGGW 163
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 38.1 bits (87), Expect = 0.006
Identities = 51/176 (28%), Positives = 66/176 (37%), Gaps = 44/176 (25%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE----PSYSRERRE-T 70
RR RRG +P GGA G R+ R PP+ P +R RE +
Sbjct: 259 RRRRRGAGQP------------RTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPS 306
Query: 71 MEGKGGWSAALGSLPPPPAAAC---TALKPATRRGSCSAPLGPARRCSARRPRLHQGGAG 127
+E GG + +L A++ A +PA + S P PA G
Sbjct: 307 LERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAE--------------G 352
Query: 128 RLAAG----GAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
RL GA+A R P R A P+ RG RS + PPR AA R
Sbjct: 353 RLVKAQYIPGAQAATRGLPGRAARRKPPPLTRG------RSVEQSPPRERPRAAGR 402
Score = 31.2 bits (69), Expect = 0.72
Identities = 48/181 (26%), Positives = 62/181 (34%), Gaps = 14/181 (7%)
Query: 22 ERRPGLRSE-GRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGW--S 78
E PGL + G++ G L+ E+GG GR +G +P T G G+ S
Sbjct: 84 EALPGLVWDLGQQLGDLSLESGGLEQESGRSSGFYEDPSSTGGPDSPPSTFCGDSGFSGS 143
Query: 79 AALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQ-------GGAGRLAA 131
++ G L P A + G S A PR G AG A
Sbjct: 144 SSYGRLGPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAGGSAGPEAC 203
Query: 132 GGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRPWQGSWGRLLSH 191
AE R P S L +A + R + P D A RP G LL
Sbjct: 204 SSAERRARAGPFL-TPSPLHAVAMRSPRPCGRPPTDSP---DAGGAGRPLDGYISALLRR 259
Query: 192 R 192
R
Sbjct: 260 R 260
Score = 28.1 bits (61), Expect = 6.1
Identities = 49/174 (28%), Positives = 60/174 (34%), Gaps = 42/174 (24%)
Query: 18 GRRGERRP-GLRSEGRRKGLLAAEAGGAVLGGGRRAGRRA-EPPEPSYSRERRETMEGKG 75
GR G P G+ + R K L A + G R A R+ P P+
Sbjct: 147 GRLGPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPT------------- 193
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRL---------HQGGA 126
A GS P AC++ + R G P P + R PR GGA
Sbjct: 194 ----AGGSAGPE---ACSSAERRARAGPFLTP-SPLHAVAMRSPRPCGRPPTDSPDAGGA 245
Query: 127 GRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADRP 180
GR G A RR RGA + + G AD G PRR RP
Sbjct: 246 GRPLDGYISALLRRRRRRGAGQPRT--SPGGADGG--------PRRQNSVRQRP 289
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 37.7 bits (86), Expect = 0.008
Identities = 50/169 (29%), Positives = 62/169 (36%), Gaps = 36/169 (21%)
Query: 18 GRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGW 77
G +G R R+ G R A + L R A RA+ P P
Sbjct: 15 GGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVP---------------- 58
Query: 78 SAALGSLPPPPAAACTALKPATRRGSCSAPLGPAR-------RCSARRPRLHQG------ 124
A G++P PPAAA A +PA RG AP R + S R P H+
Sbjct: 59 --AAGAVPSPPAAAHPA-RPAL-RGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGM 114
Query: 125 GAGRLAAGGAEAGERR---SPNRGATSSLSPIARGAADTGVRSAAEDPP 170
G GR G RR +P G + LS +A G A G PP
Sbjct: 115 GRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.7 bits (86), Expect = 0.008
Identities = 55/205 (26%), Positives = 72/205 (35%), Gaps = 28/205 (13%)
Query: 8 PLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGR----RAGRRAEPPEPSY 63
P + R G RP L G R +A+ G GR G R+ PPEP
Sbjct: 109 PKLRSTANRDNDSGGSRPPLLPPGGRS--TSAKPFSPPSGPGRFPVPSPGHRSGPPEP-- 164
Query: 64 SRERRETMEGKGGWSAALGSLPPP-PAAACTALKPATRRGSCSAPLGPARRCSARRPRLH 122
+R + + S+PPP P+ RGS P GP + P
Sbjct: 165 --QRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPF 222
Query: 123 QGGAGRLAAGGAEAGERRSPNRGATSSLSPIAR--GAADTGVRSAAEDPPRRDGIAADRP 180
G G GG+ R+SP SS SP + T R+ + PP +RP
Sbjct: 223 PGNRGTALGGGS---IRQSP----LSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRP 275
Query: 181 WQGSWGRLLSHRAAEHPHPVQESLP 205
HR A P P Q + P
Sbjct: 276 --------SIHREAVPPPPPQNNKP 292
Score = 29.6 bits (65), Expect = 2.1
Identities = 32/133 (24%), Positives = 48/133 (36%), Gaps = 7/133 (5%)
Query: 54 RRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARR 113
R A PP P + + + S+ PPPP+ P + G+ P P R
Sbjct: 279 REAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRN 338
Query: 114 ---CSARRPRLHQGGAGRLAAGGAEAGE---RRSPNR-GATSSLSPIARGAADTGVRSAA 166
S+ P G +G L +E R P R G P++R + + A
Sbjct: 339 LSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPAT 398
Query: 167 EDPPRRDGIAADR 179
P R G+ + R
Sbjct: 399 PQLPSRSGVDSPR 411
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,087,050
Number of Sequences: 37866
Number of extensions: 653911
Number of successful extensions: 4807
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 577
Number of HSP's that attempted gapping in prelim test: 4134
Number of HSP's gapped (non-prelim): 1150
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.