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Search of human proteins with 239755121
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755121 PREDICTED: hypothetical protein [Homo sapiens]
(339 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755121 PREDICTED: hypothetical protein [Homo sapiens] 699 0.0
gi|239749649 PREDICTED: hypothetical protein [Homo sapiens] 699 0.0
gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo ... 699 0.0
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 35 0.073
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 35 0.073
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 35 0.073
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 35 0.096
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 35 0.096
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens] 35 0.096
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens] 35 0.13
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 35 0.13
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 35 0.13
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 34 0.21
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 34 0.21
gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo ... 33 0.36
gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo ... 33 0.36
gi|239757272 PREDICTED: hypothetical protein [Homo sapiens] 33 0.48
gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] 33 0.48
gi|239751775 PREDICTED: hypothetical protein [Homo sapiens] 33 0.48
gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ... 33 0.48
gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo ... 33 0.48
gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ... 33 0.48
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 33 0.48
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 32 0.62
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 32 0.81
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens] 32 0.81
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 32 0.81
>gi|239755121 PREDICTED: hypothetical protein [Homo sapiens]
Length = 339
Score = 699 bits (1803), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
Query: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
>gi|239749649 PREDICTED: hypothetical protein [Homo sapiens]
Length = 339
Score = 699 bits (1803), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
Query: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
>gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo
sapiens]
Length = 339
Score = 699 bits (1803), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1 MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
Query: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61 LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 38.9 bits (89), Expect = 0.007
Identities = 43/133 (32%), Positives = 51/133 (38%), Gaps = 10/133 (7%)
Query: 139 ALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHG 198
A G Q H+A + G A G P+ G Q RV + VGAR
Sbjct: 810 AWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 199 QQAPLD----RTVQQHAQGAHQVEDVAARVPR--APAAARPGRRAQRAGGGRAHRQAVQ- 251
Q A R H GA ++ R R APAAA + RA GRAHR Q
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 252 RRVHLHAEARPGS 264
H H RPG+
Sbjct: 930 APSHRH---RPGA 939
Score = 29.3 bits (64), Expect = 5.3
Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 30/173 (17%)
Query: 168 VGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQA--PLDRTVQQHAQGAHQVEDVAARVP 225
V G QV G VLV+ G G A PL V Q + +V RV
Sbjct: 802 VAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMR-QRRVRAGRRRVG 860
Query: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRV-HLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
A A A GR+ AGGG RRV H H +RA C + R +
Sbjct: 861 -ARAVAAAGRQGAGAGGGG-------RRVRHGHGHGAAVLQRAPCRQQR---------HL 903
Query: 285 PGSAETTAGAWVWGARVQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRR 337
+A A V A+ + P P R PG RG R RRR
Sbjct: 904 APAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHR---------PGARGRRSRRR 947
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 38.9 bits (89), Expect = 0.007
Identities = 43/133 (32%), Positives = 51/133 (38%), Gaps = 10/133 (7%)
Query: 139 ALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHG 198
A G Q H+A + G A G P+ G Q RV + VGAR
Sbjct: 810 AWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 199 QQAPLD----RTVQQHAQGAHQVEDVAARVPR--APAAARPGRRAQRAGGGRAHRQAVQ- 251
Q A R H GA ++ R R APAAA + RA GRAHR Q
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 252 RRVHLHAEARPGS 264
H H RPG+
Sbjct: 930 APSHRH---RPGA 939
Score = 29.3 bits (64), Expect = 5.3
Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 30/173 (17%)
Query: 168 VGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQA--PLDRTVQQHAQGAHQVEDVAARVP 225
V G QV G VLV+ G G A PL V Q + +V RV
Sbjct: 802 VAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMR-QRRVRAGRRRVG 860
Query: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRV-HLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
A A A GR+ AGGG RRV H H +RA C + R +
Sbjct: 861 -ARAVAAAGRQGAGAGGGG-------RRVRHGHGHGAAVLQRAPCRQQR---------HL 903
Query: 285 PGSAETTAGAWVWGARVQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRR 337
+A A V A+ + P P R PG RG R RRR
Sbjct: 904 APAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHR---------PGARGRRSRRR 947
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.073
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
HQ LP A+ GG GGGG + GR +L+G+ + T
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247
Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
+HGQ + V+ ++G V+ AAARP R GG R HR+A R
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295
Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
A+ R G+ A G CR +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.073
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
HQ LP A+ GG GGGG + GR +L+G+ + T
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247
Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
+HGQ + V+ ++G V+ AAARP R GG R HR+A R
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295
Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
A+ R G+ A G CR +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.073
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
HQ LP A+ GG GGGG + GR +L+G+ + T
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247
Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
+HGQ + V+ ++G V+ AAARP R GG R HR+A R
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295
Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
A+ R G+ A G CR +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.0 bits (79), Expect = 0.096
Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 18/189 (9%)
Query: 128 VLRAP-TDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQ 186
VLR P + A AL P P P P GG G VEA
Sbjct: 52 VLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAAS------- 104
Query: 187 LVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAH 246
G Q + ++ P + A G + AA + R GRR R G G +H
Sbjct: 105 --GEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWSH 162
Query: 247 RQAVQRRVHLHAEAR----PGSERAG-CGRCRCPRGYWRDSWIPGSAETTAGAWVWGARV 301
+ + A PGS R G GR PR R+ P +T A + R
Sbjct: 163 GHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPR---RERRQPSLQRSTPPAPTYSPRS 219
Query: 302 QWLDPRGSR 310
DP R
Sbjct: 220 DPRDPAAPR 228
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.0 bits (79), Expect = 0.096
Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 18/189 (9%)
Query: 128 VLRAP-TDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQ 186
VLR P + A AL P P P P GG G VEA
Sbjct: 52 VLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAAS------- 104
Query: 187 LVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAH 246
G Q + ++ P + A G + AA + R GRR R G G +H
Sbjct: 105 --GEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWSH 162
Query: 247 RQAVQRRVHLHAEAR----PGSERAG-CGRCRCPRGYWRDSWIPGSAETTAGAWVWGARV 301
+ + A PGS R G GR PR R+ P +T A + R
Sbjct: 163 GHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPR---RERRQPSLQRSTPPAPTYSPRS 219
Query: 302 QWLDPRGSR 310
DP R
Sbjct: 220 DPRDPAAPR 228
>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
Length = 770
Score = 35.0 bits (79), Expect = 0.096
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 24/122 (19%)
Query: 93 ICSETAPGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAP--TDAEAQALVG---LGTPQ 147
IC++ P F+ QE HQ+ V A AV RA T AE A++G L
Sbjct: 88 ICAQVIP---FLSQE-----------HQQQV-AQAVERAKQVTMAELNAIIGQQQLQAQH 132
Query: 148 THQAHLP----WPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQAPL 203
H P P G P G+P GG + AL L + + +DD+ H +
Sbjct: 133 LSHGHGPPVPLTPHPSGLQPPGIPPLGGSAGLLALSSALSGQSHLAIKDDKKHHDAEHHR 192
Query: 204 DR 205
DR
Sbjct: 193 DR 194
>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
Length = 498
Score = 34.7 bits (78), Expect = 0.13
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 158 AVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQV 217
A AAP G GGGGG+ E L ++ L G +D K + + + ++ +G H+
Sbjct: 4 AAAAAPSG---GGGGGEEERLEEKSEDQDLQGLKDKPLKFKK---VKKDKKEEKEGKHEP 57
Query: 218 EDVAARVPRAPAAARPGRRAQRAGGGRAHRQA 249
+A PA A ++ +G A +A
Sbjct: 58 VQPSAHHSAEPAEAGKAETSEGSGSAPAVPEA 89
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 34.7 bits (78), Expect = 0.13
Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)
Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
+A +VG Q Q HL VGA G L +G G + RVL E
Sbjct: 93 EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 139
Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
G AP Q H +GA + R A A A R AQ G GGR+H
Sbjct: 140 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 191
Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
R A A G GCG R P R WR PG V G
Sbjct: 192 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 247
Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
+ L R E G G +P
Sbjct: 248 -----SAAASLARGPRSESGRGLDP 267
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 34.7 bits (78), Expect = 0.13
Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)
Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
+A +VG Q Q HL VGA G L +G G + RVL E
Sbjct: 242 EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 288
Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
G AP Q H +GA + R A A A R AQ G GGR+H
Sbjct: 289 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 340
Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
R A A G GCG R P R WR PG V G
Sbjct: 341 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 396
Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
+ L R E G G +P
Sbjct: 397 -----SAAASLARGPRSESGRGLDP 416
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 34.7 bits (78), Expect = 0.13
Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)
Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
+A +VG Q Q HL VGA G L +G G + RVL E
Sbjct: 242 EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 288
Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
G AP Q H +GA + R A A A R AQ G GGR+H
Sbjct: 289 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 340
Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
R A A G GCG R P R WR PG V G
Sbjct: 341 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 396
Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
+ L R E G G +P
Sbjct: 397 -----SAAASLARGPRSESGRGLDP 416
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 33.9 bits (76), Expect = 0.21
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 206 TVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSE 265
T+ Q Q A Q + ++P P AA PGR R A +R + A A +
Sbjct: 9 TLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAA 68
Query: 266 RAGCGRCRCPRGYWRDSWIPGSAETTA 292
AG G P G + PGS E A
Sbjct: 69 AAGLGHPASPGG--SEDGPPGSEEEDA 93
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 33.9 bits (76), Expect = 0.21
Identities = 62/210 (29%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 123 VDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQ---VEALG 179
V A A RAP A A A P + P PRA AAP P G
Sbjct: 140 VAAAAPARAPRAAAAAATA----PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Query: 180 RVLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPG--RRA 237
V AR+ Q P QQ Q V RA AARP R
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAV-RAGGAARPVSLREV 254
Query: 238 QR------AGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETT 291
R GGR R VQ + A AR ER G PRG PG A
Sbjct: 255 VRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGD-----RPGRAPPA 309
Query: 292 AGAWVWGARVQWLDPRGSRRPLLESRRRED 321
A A ++ RG +LE ED
Sbjct: 310 ASARPSRSK------RGGEERVLEKEEEED 333
>gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 33.1 bits (74), Expect = 0.36
Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 199 QQAPLDRTVQQHAQGAHQVED------VAARVPRAPAAARPGRRAQRAGGGRAHRQAVQR 252
Q AP R GAH++ V+ PR+ A ARPG R R G A R ++
Sbjct: 29 QAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARPGARPPRPGRPLAPR--ARQ 86
Query: 253 RVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWLDPRGSRRP 312
V A R GS R R RG PG A + GAR L P + R
Sbjct: 87 PVPHRAVPRQGSLREPLPSRRGRRG------PPGHAPPSPSLRRRGARA--LQPSAAAR- 137
Query: 313 LLESRRREDGGGR--EPGIRGTRRR 335
+R R G R P RG RR
Sbjct: 138 ---ARARVPRGLRLHRPAHRGLPRR 159
>gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 33.1 bits (74), Expect = 0.36
Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 199 QQAPLDRTVQQHAQGAHQVED------VAARVPRAPAAARPGRRAQRAGGGRAHRQAVQR 252
Q AP R GAH++ V+ PR+ A ARPG R R G A R ++
Sbjct: 29 QAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARPGARPPRPGRPLAPR--ARQ 86
Query: 253 RVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWLDPRGSRRP 312
V A R GS R R RG PG A + GAR L P + R
Sbjct: 87 PVPHRAVPRQGSLREPLPSRRGRRG------PPGHAPPSPSLRRRGARA--LQPSAAAR- 137
Query: 313 LLESRRREDGGGR--EPGIRGTRRR 335
+R R G R P RG RR
Sbjct: 138 ---ARARVPRGLRLHRPAHRGLPRR 159
>gi|239757272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 32.7 bits (73), Expect = 0.48
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
P P+ A + + AGG + + + +V LH+ RP SE AG P +W
Sbjct: 12 PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62
Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
W W WL G
Sbjct: 63 GAPPRALPAVWPWLRGPAWLSVGG 86
>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
Length = 254
Score = 32.7 bits (73), Expect = 0.48
Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)
Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
H+ HV +A A R P P+ + P+P V A PG PVG G ++
Sbjct: 47 HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99
Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
E G + E+LV A G+ +P + AQG ++ R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159
Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
PRAP + AQ A GGRA A H PG A R CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216
>gi|239751775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 32.7 bits (73), Expect = 0.48
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
P P+ A + + AGG + + + +V LH+ RP SE AG P +W
Sbjct: 12 PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62
Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
W W WL G
Sbjct: 63 GAPPRALPAVWPWLRGPAWLSVGG 86
>gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo
sapiens]
Length = 254
Score = 32.7 bits (73), Expect = 0.48
Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)
Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
H+ HV +A A R P P+ + P+P V A PG PVG G ++
Sbjct: 47 HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99
Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
E G + E+LV A G+ +P + AQG ++ R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159
Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
PRAP + AQ A GGRA A H PG A R CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216
>gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo
sapiens]
Length = 314
Score = 32.7 bits (73), Expect = 0.48
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
P P+ A + + AGG + + + +V LH+ RP SE AG P +W
Sbjct: 12 PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62
Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
W W WL G
Sbjct: 63 GAPPRALPAVWPWLRGPAWLSVGG 86
>gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
sapiens]
Length = 254
Score = 32.7 bits (73), Expect = 0.48
Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)
Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
H+ HV +A A R P P+ + P+P V A PG PVG G ++
Sbjct: 47 HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99
Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
E G + E+LV A G+ +P + AQG ++ R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159
Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
PRAP + AQ A GGRA A H PG A R CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 32.7 bits (73), Expect = 0.48
Identities = 35/133 (26%), Positives = 49/133 (36%), Gaps = 20/133 (15%)
Query: 156 PRAVGAAPGGLPVGG-GGGQVEALGRVLVEEQLVGARDDQTKHGQQAPLDRT-----VQQ 209
PR G PGGL +G G G E+LG E G D T AP+ R ++
Sbjct: 1326 PRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGTGSPSPAPMRRAQSSLCLRD 1385
Query: 210 HAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGC 269
Q +++R P GR ++ G RQ ++R PG A
Sbjct: 1386 ETLAGGQRRKLSSRFP-------VGRSSESFSPGDTPRQRFRQR-------HPGPLGAPV 1431
Query: 270 GRCRCPRGYWRDS 282
+ P W +S
Sbjct: 1432 SHSKGPGVGWENS 1444
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 32.3 bits (72), Expect = 0.62
Identities = 37/120 (30%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 156 PRAVGAAPGGLPVGGGGG----QVEALGRVL------VEEQLV-GARDDQTKHGQQAPLD 204
P AV AA G GGGGG GR+L V QL+ G++ T+ A
Sbjct: 31 PPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAA 90
Query: 205 RTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGS 264
GA + ++ P PAAA P +A RA G RR PGS
Sbjct: 91 SLGSLPGPGAARGPSPSSPTP--PAAAAPAEQAPRAKGRPRRSPESHRRSSSPERRSPGS 148
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 32.0 bits (71), Expect = 0.81
Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 98 APGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLP--W 155
APG G+ +LS+ W RA + G+G + ++ P W
Sbjct: 136 APGSGLRGRGQRGRLSAATW-------RRGPARAELAGSGRRWWGVGEAREGRSAPPRDW 188
Query: 156 PRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQ----------QAPLDR 205
P +G P GG GG G V ARD G+ P
Sbjct: 189 PEPLGELRPSAPRGGKGGP--RAGVVAAS----WARDSGPGVGRPVPDLEVAVINGPQPL 242
Query: 206 TVQQHAQGAHQVE--DVAARVPRAPAAARPGRRAQRAGGGRAHR 247
+ H Q + E + AR+P PAA G R G GR R
Sbjct: 243 AICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR 286
>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 32.0 bits (71), Expect = 0.81
Identities = 61/251 (24%), Positives = 86/251 (34%), Gaps = 25/251 (9%)
Query: 78 APRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEA 137
AP A P C L+C+ F+G++ A +R +R L+ P +A
Sbjct: 71 APGARELSPADGCVLVCAVCR---CFLGEQWAAFERARTPVDKRMY----WLKRPHQCDA 123
Query: 138 QA---LVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGG-QVEALGRVLVEEQLVGARDD 193
A G G P+ A+G+A G GGG ++ + L D
Sbjct: 124 GAGGRRGGAGAPREWNVAY----ALGSATGDDDEDDGGGPRLRGAAEETRDSDLSELSDT 179
Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPR---APAAARPGRRAQRAGGGRAHRQAV 250
P H GA R AP A PG+ A+ + GRA + +
Sbjct: 180 DPLSEPDPPARDAASPHQDGAPGPGPRGGRGQEWRPAPGPA-PGQGAEASAQGRAEEEGL 238
Query: 251 QRRVHLHAEARPG--SERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWL--DP 306
+ H E + G R G GR P R S + + G V A + P
Sbjct: 239 PAKAHADGEPKAGVRRRRKGVGRHWVPEA--RASVLRSIQDPWQGPLVQEAPADGMKGPP 296
Query: 307 RGSRRPLLESR 317
G LESR
Sbjct: 297 SGRATKTLESR 307
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 32.0 bits (71), Expect = 0.81
Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 98 APGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLP--W 155
APG G+ +LS+ W RA + G+G + ++ P W
Sbjct: 136 APGSGLRGRGQRGRLSAATW-------RRGPARAELAGSGRRWWGVGEAREGRSAPPRDW 188
Query: 156 PRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQ----------QAPLDR 205
P +G P GG GG G V ARD G+ P
Sbjct: 189 PEPLGELRPSAPRGGKGGP--RAGVVAAS----WARDSGPGVGRPVPDLEVAVINGPQPL 242
Query: 206 TVQQHAQGAHQVE--DVAARVPRAPAAARPGRRAQRAGGGRAHR 247
+ H Q + E + AR+P PAA G R G GR R
Sbjct: 243 AICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,105,301
Number of Sequences: 37866
Number of extensions: 776079
Number of successful extensions: 3618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 3554
Number of HSP's gapped (non-prelim): 164
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.