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Search of human proteins with 239754987
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
(412 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 858 0.0
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens] 737 0.0
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ... 618 e-177
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 5e-05
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 46 5e-05
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 44 3e-04
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 43 5e-04
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 43 5e-04
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 43 5e-04
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 43 6e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.002
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.004
gi|18079216 CASK interacting protein 1 [Homo sapiens] 40 0.005
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.005
gi|239749938 PREDICTED: hypothetical protein XP_002347218 [Homo ... 39 0.007
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 39 0.007
gi|239744260 PREDICTED: hypothetical protein XP_002343086 [Homo ... 39 0.007
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 39 0.007
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 39 0.009
gi|41281612 zinc finger protein 828 [Homo sapiens] 39 0.009
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 39 0.011
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 39 0.011
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 858 bits (2216), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN
Sbjct: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
Query: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS
Sbjct: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
Query: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT
Sbjct: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
Query: 181 AREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPR 240
AREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPR
Sbjct: 181 AREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPR 240
Query: 241 ASWARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHA 300
ASWARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHA
Sbjct: 241 ASWARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHA 300
Query: 301 LSASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRV 360
LSASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRV
Sbjct: 301 LSASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRV 360
Query: 361 RTSKGSSRRSERRWRAHEAASTVCARNSLSAPSTPQRVQVRGQHAAREALLS 412
RTSKGSSRRSERRWRAHEAASTVCARNSLSAPSTPQRVQVRGQHAAREALLS
Sbjct: 361 RTSKGSSRRSERRWRAHEAASTVCARNSLSAPSTPQRVQVRGQHAAREALLS 412
>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 446
Score = 737 bits (1903), Expect = 0.0
Identities = 378/446 (84%), Positives = 383/446 (85%), Gaps = 34/446 (7%)
Query: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN
Sbjct: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
Query: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS
Sbjct: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
Query: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT
Sbjct: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
Query: 181 AREGPREGAPTG-----CPEGKSCGERRPGP---GTNQPLWPAS------LSPWRPYWEF 226
AREGPREGAPTG P+G + G G W S + P
Sbjct: 181 AREGPREGAPTGSKTLHLPKGAPNSQVSRGEVMRGAAAWAWDESAPLACLVEPLAAILGI 240
Query: 227 P--------------------ALVCFPIHEHPPRASWARHLDTVQTPPGVGAAGAEILQL 266
P L +H+HPPRASWARHLDTVQTPPGVGAAGAEILQL
Sbjct: 241 PCPRRRTHAQPPPQDLRTHSHTLYLSLLHQHPPRASWARHLDTVQTPPGVGAAGAEILQL 300
Query: 267 LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 326
LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG
Sbjct: 301 LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 360
Query: 327 SLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRTSKGSSRRSERRWRAHEAASTVCAR 386
SLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRTSKGSSRRSERRWRAHEAASTVCAR
Sbjct: 361 SLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRTSKGSSRRSERRWRAHEAASTVCAR 420
Query: 387 NSLSAPSTPQRVQVRGQHAAREALLS 412
NSLSAPSTPQRVQVRGQHAAREALLS
Sbjct: 421 NSLSAPSTPQRVQVRGQHAAREALLS 446
>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
sapiens]
Length = 487
Score = 618 bits (1593), Expect = e-177
Identities = 337/487 (69%), Positives = 350/487 (71%), Gaps = 75/487 (15%)
Query: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN
Sbjct: 1 MQQAVKYQELNAVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHN 60
Query: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS
Sbjct: 61 GDEASRLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS 120
Query: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT
Sbjct: 121 TRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
Query: 181 AREGPREGAPTG-----CPEGKSCGERRPGP---GTNQPLWPAS------LSPWRPYWEF 226
AREGPREGAPTG P+G + G G W S + P
Sbjct: 181 AREGPREGAPTGSKTLHLPKGAPNSQVSRGEVMRGAAAWAWDESAPLACLVEPLAAILGI 240
Query: 227 P--------------------ALVCFPIHEHPPRASWARHLDTVQTPPGVGAAGAEILQL 266
P L +H+HPPRASWARHLDTVQTPPGVGAAGAEILQL
Sbjct: 241 PCPRRRTHAQPPPQDLRTHSHTLYLSLLHQHPPRASWARHLDTVQTPPGVGAAGAEILQL 300
Query: 267 LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 326
LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG
Sbjct: 301 LALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 360
Query: 327 SLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRTSKGSSRRS-----------ERRWR 375
SLEGQTQSLRHDRQGA P Q H+A+ + ++ R+ E +
Sbjct: 361 SLEGQTQSLRHDRQGAQQVLPEAQQRAHEAVPQADKARLQVERAVVPAQQAGAHLEGLQQ 420
Query: 376 AHEAA-STVCARNSLSAPSTPQR-----------------------------VQVRGQHA 405
A AA + R P PQR VQVRGQHA
Sbjct: 421 AQRAAVARARGRQHRVRPQLPQRPEHPAAGQVRDARKVGLAQVARVVHVQQQVQVRGQHA 480
Query: 406 AREALLS 412
AREALLS
Sbjct: 481 AREALLS 487
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 46.2 bits (108), Expect = 5e-05
Identities = 73/281 (25%), Positives = 95/281 (33%), Gaps = 49/281 (17%)
Query: 14 PGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGF-RLGPVPWRPQRHNGDEASRLFGSAV 72
P +P AP P +PGR G R GP+ + R + +E G A
Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR-GKAT 148
Query: 73 VKAQQVPLSLG----------------------------GHLRGAPDAEPARPAEGARPS 104
++ LS G G R AP A P P EG R S
Sbjct: 149 EAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKS 208
Query: 105 PGTRARKTRPRARTASTRRPCA--LCPEPALRA------QLGRLDRRGPQHR-VQRALAL 155
+ + + A+ RRP A PA R+ L R GP R RA A
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 268
Query: 156 SAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAP--TGCPEGKSCGERRPGPGTNQPLW 213
+ + L L P R +A GP +P T P G P PL
Sbjct: 269 PSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPL- 327
Query: 214 PASLSPWRPYWEFPALVCFPIHEHPPRASWARHLDTVQTPP 254
PA+L P P + P+ PP S L T+ +PP
Sbjct: 328 PATLPPSPP-------LATPLPLAPPSPSAPPSLQTLPSPP 361
Score = 32.7 bits (73), Expect = 0.62
Identities = 93/444 (20%), Positives = 133/444 (29%), Gaps = 94/444 (21%)
Query: 18 PRPEKAAREAPLKGYPGPP----RWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVV 73
P+ A PL+G P PP P P L P+ P AS
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPP----SPPASPPLSPLAT 647
Query: 74 KAQQVPLSLGGHLRGAPDAEP--------------------ARPAEGARPSPGTRARKTR 113
+ Q P +L HL AP + P A P A PS +
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 707
Query: 114 PRARTASTRRPCALCP--------------EPALRAQLGRLDRRGPQHRVQRALALS--- 156
P + P A P P+ A P RV LA
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767
Query: 157 -AGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPA 215
A LP +SP + P + P+ P G+ P + P+ P
Sbjct: 768 VPPSPPASLP-MSPLAKPPPQAPPALATPPLQALPS--PPASFPGQAPFSPSASLPMSPL 824
Query: 216 SLSPWRPYWEFPALVCFPIHEHPPRASWARHLDTVQTPPGVG----AAGAEILQLLALGE 271
+ P + P ++ P+ + PP + L + PP G +G + LA G
Sbjct: 825 ATPP----PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP 880
Query: 272 GRGPKQLLPSNFS--EWQAHRS---------RGLQNSPHALSASCPPTSPLTSA--PNGY 318
P + S S + H S RG + P +A+ PP +A P +
Sbjct: 881 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW 940
Query: 319 QH-------------------PARGSGSLEG-----QTQSLRHDRQGAGAAHPALAQVLH 354
PA G GS +G +T+ GA P +
Sbjct: 941 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTS 1000
Query: 355 DALGRVRTSKGSSRRSERRWRAHE 378
G+S RS ++ R E
Sbjct: 1001 GGKAAAGAGAGASSRSPKQARLGE 1024
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 46.2 bits (108), Expect = 5e-05
Identities = 88/333 (26%), Positives = 113/333 (33%), Gaps = 64/333 (19%)
Query: 69 GSAVVKAQQ---VPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPC 125
G V++A Q V L GG + P R A P A R RAR A ++
Sbjct: 387 GQCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARA--PGRHQAAVLRRRRARVARAQQLA 444
Query: 126 ALCPEPALRAQLG---RLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAR 182
L A++A +L R P R + + + P SP ++E AR
Sbjct: 445 RLRVGHAVQAPQALQAQLHARLPSRRARSSAPAPSAQGRCMTPARSPVAAREAARLRGAR 504
Query: 183 EGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPRAS 242
GP A T +G G RRPGP P L P FP L P PP +
Sbjct: 505 PGPAASAATRMWQGS--GRRRPGPD------PQELDP-HCKLSFPRLPLTPTESQPPSHN 555
Query: 243 WARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALS 302
L + E RG + L +RG P AL
Sbjct: 556 ------------------------LFVEELRGARAAL-----------ARGWM-LPRALR 579
Query: 303 ASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRT 362
P P A G PA SGS+E + S R R G H A R T
Sbjct: 580 RQLCPIDP--RARPGSVAPAAASGSIESSSLSGRAARLALGK---------HRACLRRGT 628
Query: 363 SKGSSRRSERRWRAHEAASTVCARNSLSAPSTP 395
G R + R A + + R +L+AP P
Sbjct: 629 EAGRPRLAGERRGAGDGRARDFRRIALAAPQFP 661
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 46.2 bits (108), Expect = 5e-05
Identities = 88/333 (26%), Positives = 113/333 (33%), Gaps = 64/333 (19%)
Query: 69 GSAVVKAQQ---VPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPC 125
G V++A Q V L GG + P R A P A R RAR A ++
Sbjct: 387 GQCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARA--PGRHQAAVLRRRRARVARAQQLA 444
Query: 126 ALCPEPALRAQLG---RLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAR 182
L A++A +L R P R + + + P SP ++E AR
Sbjct: 445 RLRVGHAVQAPQALQAQLHARLPSRRARSSAPAPSAQGRCMTPARSPVAAREAARLRGAR 504
Query: 183 EGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPRAS 242
GP A T +G G RRPGP P L P FP L P PP +
Sbjct: 505 PGPAASAATRMWQGS--GRRRPGPD------PQELDP-HCKLSFPRLPLTPTESQPPSHN 555
Query: 243 WARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALS 302
L + E RG + L +RG P AL
Sbjct: 556 ------------------------LFVEELRGARAAL-----------ARGWM-LPRALR 579
Query: 303 ASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLRHDRQGAGAAHPALAQVLHDALGRVRT 362
P P A G PA SGS+E + S R R G H A R T
Sbjct: 580 RQLCPIDP--RARPGSVAPAAASGSIESSSLSGRAARLALGK---------HRACLRRGT 628
Query: 363 SKGSSRRSERRWRAHEAASTVCARNSLSAPSTP 395
G R + R A + + R +L+AP P
Sbjct: 629 EAGRPRLAGERRGAGDGRARDFRRIALAAPQFP 661
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 46.2 bits (108), Expect = 5e-05
Identities = 114/439 (25%), Positives = 152/439 (34%), Gaps = 61/439 (13%)
Query: 14 PGEQPRPEKAAREAPLKGY--------PGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEAS 65
PG P PE+ A P +G P PAP P P +H AS
Sbjct: 454 PGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPS-------PPAPKSCLKHRPAAAS 506
Query: 66 R--LFGSAVVKAQQVPLSLGGHLRGAPDAEPARP-AEGAR--PSPGTRARKTRPRARTAS 120
+ A+ P+ G A A P RP AE A P+ RA R R +
Sbjct: 507 EGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGA 566
Query: 121 TRR--------PCALCPEPALRAQLGR------LDRRGPQHRVQRALALSAGLEDAHLPC 166
R C P P + L R L R GP R + AL GL +
Sbjct: 567 ELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAK 626
Query: 167 LSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEF 226
PR E RG + G R +P G KS E PGT +P PA+ P
Sbjct: 627 PGPRKLAE-RGPQDS--GDRAASPAG--PRKSPQEAAAAPGTREPC-PAAQEPAPSEDRN 680
Query: 227 PALVCFPIHEHPPRASWARHLDTVQTPPGVGAAGAEILQLLAL----GEGRGPKQLLPS- 281
P FP+ S Q GV AE+ +L E + P P+
Sbjct: 681 P----FPVKLRSTSLSLKYRDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAPAL 736
Query: 282 NFSEWQAHRSRGLQNSPHALSASCP-PTSPLTSA---PNGYQHPARGSGS----LEGQTQ 333
+ + + +G P LS+ P P PL + P+ P G G E +T
Sbjct: 737 RGTRAPSDQGKGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTA 796
Query: 334 SLRHDRQGAGAAHPALAQVLHDALGRVRTSKGSSRRSERRWRAHEAAS---TVCARNSLS 390
R R+GA + P A A G+ + R +RR + + AR S
Sbjct: 797 EKRPLRRGAEKSLPP-AATGPGADGQPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKS 855
Query: 391 APSTPQRVQVRGQHAAREA 409
P +V RGQ ++A
Sbjct: 856 EPGKQAKVPERGQEPVKQA 874
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/192 (30%), Positives = 72/192 (37%), Gaps = 33/192 (17%)
Query: 23 AAREAPLKGYPGPPRWPAPGRRRGFRLG--PVPWRPQRHNGDEASRLFGSAVVKAQQVPL 80
AAR AP P PP P RR +G P P RP SR G
Sbjct: 6 AARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAG----------- 54
Query: 81 SLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQLGRL 140
P P+ + +R SP RAR+T P + P A ALR LGR
Sbjct: 55 ---------PFLPPSHASTSSR-SPPPRARRTEPAVPPSCGSGPGA---AGALRMGLGR- 100
Query: 141 DRRGPQHRVQRAL----ALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEG 196
+R + V RAL A +AGL L R +R A E G GC G
Sbjct: 101 TQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEA--RGRGDGCSLG 158
Query: 197 KSCGERRPGPGT 208
+ +R PG G+
Sbjct: 159 RVSPDRTPGKGS 170
Score = 32.3 bits (72), Expect = 0.80
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 305 CPPTSPLTSAPNGYQHPARGSGSL---EGQTQSLRHDRQGAGAAHPALAQVLHD---ALG 358
CPP SP AP+ P+R +G + S R A PA+ A G
Sbjct: 34 CPP-SPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAG 92
Query: 359 RVRTSKGSSRRSERRWRAHEAASTVCARNSLSAPSTPQRVQVRGQHAAR 407
+R G ++R+ R + A TV A L A +R+ +RGQ R
Sbjct: 93 ALRMGLGRTQRAARVAVSRALAGTVAAAAGLGA-RRARRLHLRGQIGVR 140
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/192 (30%), Positives = 72/192 (37%), Gaps = 33/192 (17%)
Query: 23 AAREAPLKGYPGPPRWPAPGRRRGFRLG--PVPWRPQRHNGDEASRLFGSAVVKAQQVPL 80
AAR AP P PP P RR +G P P RP SR G
Sbjct: 6 AARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAG----------- 54
Query: 81 SLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQLGRL 140
P P+ + +R SP RAR+T P + P A ALR LGR
Sbjct: 55 ---------PFLPPSHASTSSR-SPPPRARRTEPAVPPSCGSGPGA---AGALRMGLGR- 100
Query: 141 DRRGPQHRVQRAL----ALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEG 196
+R + V RAL A +AGL L R +R A E G GC G
Sbjct: 101 TQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEA--RGRGDGCSLG 158
Query: 197 KSCGERRPGPGT 208
+ +R PG G+
Sbjct: 159 RVSPDRTPGKGS 170
Score = 32.3 bits (72), Expect = 0.80
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 305 CPPTSPLTSAPNGYQHPARGSGSL---EGQTQSLRHDRQGAGAAHPALAQVLHD---ALG 358
CPP SP AP+ P+R +G + S R A PA+ A G
Sbjct: 34 CPP-SPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAG 92
Query: 359 RVRTSKGSSRRSERRWRAHEAASTVCARNSLSAPSTPQRVQVRGQHAAR 407
+R G ++R+ R + A TV A L A +R+ +RGQ R
Sbjct: 93 ALRMGLGRTQRAARVAVSRALAGTVAAAAGLGA-RRARRLHLRGQIGVR 140
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 43.1 bits (100), Expect = 5e-04
Identities = 34/93 (36%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 168 SPRPSQEMRGEATAR-EGPREGAPT---GCPEG-KSCGERRPGPGTNQPLWPASLSPWRP 222
+PRPS E GEA P GAP G P+G K PGT QP P+ SPW
Sbjct: 6971 TPRPSSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQ 7030
Query: 223 YWEFPALVCFPIHEHPPRASWARHLDTVQTPPG 255
PA C P P+ + H PPG
Sbjct: 7031 ----PAPFCHPKQGSAPQEGCSPHPAVAPCPPG 7059
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 43.1 bits (100), Expect = 5e-04
Identities = 86/314 (27%), Positives = 109/314 (34%), Gaps = 55/314 (17%)
Query: 37 RWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQVPLSLGG------HLRGAP 90
R PGR RG +P G + R A + PL +GG HL G P
Sbjct: 74 RRACPGRGRG----GLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGP 129
Query: 91 DAE-----------PARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQLGR 139
PA A G RP + +TR R R AS R P L P PA
Sbjct: 130 PRRRPPRLAAAHGLPASEAPGLRPD----SARTRLRLRLASARLPRGLPPAPAAGLWRAG 185
Query: 140 LDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAR----EGPREGAPTGCPE 195
R P +Q LS GL + P E+ A +R G EG P
Sbjct: 186 CTRLRPL-LLQPPPMLSPGLAQS--------PGVELHARAHSRAHTCAGGGEGDPGPIVG 236
Query: 196 GKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPRASW----ARHLDTVQ 251
G+ E P + P PA SP+ Y E ASW A+ D ++
Sbjct: 237 GRPENEDSP-RFPDVPTRPAGPSPF--YCEGTEPGSQAWSARAGTASWETAAAQRPDQLE 293
Query: 252 --TPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTS 309
PPG GA L+ LA RG + L S L P +L PP S
Sbjct: 294 ETRPPGAARPGARRLRSLASRLPRGGRWL--------DGGGSGRLTREPASLPNPIPPGS 345
Query: 310 PLTSAPNGYQHPAR 323
+ + + Q+ R
Sbjct: 346 RVGAGGSERQNSKR 359
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 43.1 bits (100), Expect = 5e-04
Identities = 86/314 (27%), Positives = 109/314 (34%), Gaps = 55/314 (17%)
Query: 37 RWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQVPLSLGG------HLRGAP 90
R PGR RG +P G + R A + PL +GG HL G P
Sbjct: 74 RRACPGRGRG----GLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGP 129
Query: 91 DAE-----------PARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQLGR 139
PA A G RP + +TR R R AS R P L P PA
Sbjct: 130 PRRRPPRLAAAHGLPASEAPGLRPD----SARTRLRLRLASARLPRGLPPAPAAGLWRAG 185
Query: 140 LDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAR----EGPREGAPTGCPE 195
R P +Q LS GL + P E+ A +R G EG P
Sbjct: 186 CTRLRPL-LLQPPPMLSPGLAQS--------PGVELHARAHSRAHTCAGGGEGDPGPIVG 236
Query: 196 GKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHPPRASW----ARHLDTVQ 251
G+ E P + P PA SP+ Y E ASW A+ D ++
Sbjct: 237 GRPENEDSP-RFPDVPTRPAGPSPF--YCEGTEPGSQAWSARAGTASWETAAAQRPDQLE 293
Query: 252 --TPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGLQNSPHALSASCPPTS 309
PPG GA L+ LA RG + L S L P +L PP S
Sbjct: 294 ETRPPGAARPGARRLRSLASRLPRGGRWL--------DGGGSGRLTREPASLPNPIPPGS 345
Query: 310 PLTSAPNGYQHPAR 323
+ + + Q+ R
Sbjct: 346 RVGAGGSERQNSKR 359
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 42.7 bits (99), Expect = 6e-04
Identities = 70/270 (25%), Positives = 91/270 (33%), Gaps = 36/270 (13%)
Query: 8 QELNAVPGEQPRPEKAAREAP--LKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEAS 65
+E VPGE P +A P L G P P P PG PV P+ E +
Sbjct: 15 EESPKVPGEGPGHSEAETGPPQVLAGVPDQPEAPQPGPNT--TAAPVDSGPKAGLAPETT 72
Query: 66 RLFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPC 125
A AQ LSL + P P + P T + + P
Sbjct: 73 ETPAGASETAQATDLSLSPGGESKANCSPEDPCQETVSKPEVSKEATADQGSRLESAAPP 132
Query: 126 ALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGP 185
PEPA + + P+ +Q L ED P+ E+ E+ E
Sbjct: 133 EPAPEPAPQPDPRPDSQPTPKPALQPELPTQ---ED---------PTPEILSESVG-EKQ 179
Query: 186 REGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHE--------- 236
GA G GE P P + P P+ SP P P V + E
Sbjct: 180 ENGAVVPLQAGD--GEEGPAPEPHSP--PSKKSP--PANGAPPRVLQQLVEEDRMRRAHS 233
Query: 237 -HP--PRASWARHLDTVQTPPGV-GAAGAE 262
HP PR S +RH + PGV G G +
Sbjct: 234 GHPGSPRGSLSRHPSSQLAGPGVEGGEGTQ 263
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.8 bits (94), Expect = 0.002
Identities = 68/279 (24%), Positives = 92/279 (32%), Gaps = 48/279 (17%)
Query: 14 PGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGF-RLGPVPWRPQRHNGDEASRLFGSAV 72
P +P AP P +PGR G R GP+ + R + +E G A
Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR-GKAT 148
Query: 73 VKAQQVPLSLG----------------------------GHLRGAPDAEPARPAEGARPS 104
++ LS G G R AP A P P EG R S
Sbjct: 149 EAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKS 208
Query: 105 PGTRARKTRPRARTASTRRPCA--LCPEPALRA------QLGRLDRRGPQHR-VQRALAL 155
+ + + A+ RRP A PA R+ L R GP R RA A
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 268
Query: 156 SAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQPLWPA 215
+ + L L P R +A GP +P P + + + P P P
Sbjct: 269 PSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP--TLPATPH 326
Query: 216 SLSPWRPYWEFPALVCFPIHEHPPRASWARHLDTVQTPP 254
S S + P+ PP S L T+ +PP
Sbjct: 327 SSS-------LTCQLATPLPLAPPSPSAPPSLQTLPSPP 358
Score = 39.7 bits (91), Expect = 0.005
Identities = 82/325 (25%), Positives = 109/325 (33%), Gaps = 54/325 (16%)
Query: 33 PGPPRWPAPGRRRGFR-LGPVPWRPQRHNGDEASRLFGSAVVKA--QQVPLSLGGHLRGA 89
PG PR P P R LG ++ + A + G+ + ++ + P G
Sbjct: 30 PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN 89
Query: 90 PDAEPARPAEGARPSPGTRARKTRPR-----ARTASTRRPCALCPEPALRAQLGRLDRRG 144
P + P G R P A+ T P R + T RP L + LR RG
Sbjct: 90 PASRPPASGRGERAPP---AKNTSPGPVSSPGRASGTTRPGPL-GQKGLRISAEETVARG 145
Query: 145 PQHRVQRALALSAGLE-DAHLPCL-SPRPSQEMRGEATARE-----------------GP 185
+ ALSAG D P +P P+ R A E GP
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 186 REGAPTGCP----EGKSCGERRP--GPGTNQPL--------WPASLSPWRPYWEFPALVC 231
R+ + E RRP G G +P P S SP R
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS-SPARSGPSARGTPR 264
Query: 232 FPIHEHPPRASWARHLDTVQ-TPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHR 290
P H P+ + L Q TPP AA A LG PS + Q+
Sbjct: 265 APAHPSQPKPKGLQALRPPQVTPPRKDAAPA-------LGPLSSSPLATPSPSAALQSQA 317
Query: 291 SRGLQNSPHALSASCPPTSPLTSAP 315
L +PH+ S +C +PL AP
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAP 342
Score = 32.0 bits (71), Expect = 1.1
Identities = 50/209 (23%), Positives = 69/209 (33%), Gaps = 36/209 (17%)
Query: 18 PRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQ 77
P+ A PL+ P PP PG+ +P P +A + + ++ Q
Sbjct: 517 PQAPPALATPPLQALPSPPA-SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL---Q 572
Query: 78 VPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQL 137
VP S P A P A P+PG + PR A P P P R+
Sbjct: 573 VPPS--------PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP----PPPPSRSPS 620
Query: 138 GRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGK 197
L GP + A S +E+RG + EG +P E
Sbjct: 621 STLS--GPDLAGHSSSATST--------------PEELRGYDSGPEGGAAASPPPDAELA 664
Query: 198 SCGERRPGPGTNQPL----WPASLSPWRP 222
+C G PL P + PW P
Sbjct: 665 ACHPAAWSRGPAPPLAFRGAPGAPLPWPP 693
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 40.8 bits (94), Expect = 0.002
Identities = 58/221 (26%), Positives = 78/221 (35%), Gaps = 61/221 (27%)
Query: 13 VPGEQPRPEKAAREAPLKGYPGPPRWPAPG-RRRGFRLGPVPW----RPQRHNGDEASRL 67
VP P + R P + PG P W +PG R P+P R + H+G A+
Sbjct: 19 VPEPPPLSNSSQRADPARR-PGAP-WVSPGCSPESLRAAPLPGSLGARSRSHSGPPAT-- 74
Query: 68 FGSAVVKAQQVPLSLGGHLRGA-PDAEPARPAEGARPSPGTRARKTRPRARTASTRRP-- 124
+A +A GH G P + P PG + RPR +P
Sbjct: 75 --AAAARAS-------GHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHG 125
Query: 125 ---------CALCPEPALRAQLGRLDRRGPQ------HRVQRALALSAGLEDAHLPCLSP 169
C LCPE + + RRGP H +R+ AL G
Sbjct: 126 AASSCSLPRCRLCPERSAPPR-----RRGPPPLPTSCHWARRSCALRRG----------- 169
Query: 170 RPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQ 210
G A+ R GP G P PE S + P P T++
Sbjct: 170 -------GAASWRRGP--GTPAAAPEAPSPPDHSPSPWTSR 201
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 40.8 bits (94), Expect = 0.002
Identities = 58/221 (26%), Positives = 78/221 (35%), Gaps = 61/221 (27%)
Query: 13 VPGEQPRPEKAAREAPLKGYPGPPRWPAPG-RRRGFRLGPVPW----RPQRHNGDEASRL 67
VP P + R P + PG P W +PG R P+P R + H+G A+
Sbjct: 19 VPEPPPLSNSSQRADPARR-PGAP-WVSPGCSPESLRAAPLPGSLGARSRSHSGPPAT-- 74
Query: 68 FGSAVVKAQQVPLSLGGHLRGA-PDAEPARPAEGARPSPGTRARKTRPRARTASTRRP-- 124
+A +A GH G P + P PG + RPR +P
Sbjct: 75 --AAAARAS-------GHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHG 125
Query: 125 ---------CALCPEPALRAQLGRLDRRGPQ------HRVQRALALSAGLEDAHLPCLSP 169
C LCPE + + RRGP H +R+ AL G
Sbjct: 126 AASSCSLPRCRLCPERSAPPR-----RRGPPPLPTSCHWARRSCALRRG----------- 169
Query: 170 RPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQ 210
G A+ R GP G P PE S + P P T++
Sbjct: 170 -------GAASWRRGP--GTPAAAPEAPSPPDHSPSPWTSR 201
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 40.8 bits (94), Expect = 0.002
Identities = 58/221 (26%), Positives = 78/221 (35%), Gaps = 61/221 (27%)
Query: 13 VPGEQPRPEKAAREAPLKGYPGPPRWPAPG-RRRGFRLGPVPW----RPQRHNGDEASRL 67
VP P + R P + PG P W +PG R P+P R + H+G A+
Sbjct: 19 VPEPPPLSNSSQRADPARR-PGAP-WVSPGCSPESLRAAPLPGSLGARSRSHSGPPAT-- 74
Query: 68 FGSAVVKAQQVPLSLGGHLRGA-PDAEPARPAEGARPSPGTRARKTRPRARTASTRRP-- 124
+A +A GH G P + P PG + RPR +P
Sbjct: 75 --AAAARAS-------GHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHG 125
Query: 125 ---------CALCPEPALRAQLGRLDRRGPQ------HRVQRALALSAGLEDAHLPCLSP 169
C LCPE + + RRGP H +R+ AL G
Sbjct: 126 AASSCSLPRCRLCPERSAPPR-----RRGPPPLPTSCHWARRSCALRRG----------- 169
Query: 170 RPSQEMRGEATAREGPREGAPTGCPEGKSCGERRPGPGTNQ 210
G A+ R GP G P PE S + P P T++
Sbjct: 170 -------GAASWRRGP--GTPAAAPEAPSPPDHSPSPWTSR 201
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.0 bits (92), Expect = 0.004
Identities = 67/254 (26%), Positives = 87/254 (34%), Gaps = 40/254 (15%)
Query: 87 RGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCA--LCPEPALRA------QLG 138
R AP A P P EG R S + + + A+ RRP A PA R+ L
Sbjct: 182 RPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS 241
Query: 139 RLDRRGPQHR-VQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGK 197
R GP R RA A + + L L P R +A GP +P P
Sbjct: 242 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 301
Query: 198 S--------CGERRPGPGTNQP------LWPASLSPWRPYWEFPALVCFPIHEHPPRASW 243
+ + P P P L +L + P L P+ PP+A
Sbjct: 302 APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL--SPLATPPPQAPP 359
Query: 244 ARHLDTVQTPPGVGAAGAEILQLLALGEGRGPK----QLLPSNFSEWQAHRSRGLQNSPH 299
A L +Q PP A+ L LA + P LL + FS SP
Sbjct: 360 ALALPPLQAPPSPPASPP--LSPLATPSPQAPNALAVHLLQAPFSP---------PPSPP 408
Query: 300 ALSASCPPTSPLTS 313
+ PP SP S
Sbjct: 409 VQAPFSPPASPPVS 422
Score = 32.0 bits (71), Expect = 1.1
Identities = 50/209 (23%), Positives = 69/209 (33%), Gaps = 36/209 (17%)
Query: 18 PRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQ 77
P+ A PL+ P PP PG+ +P P +A + + ++ Q
Sbjct: 478 PQAPPALATPPLQALPSPPA-SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL---Q 533
Query: 78 VPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRAQL 137
VP S P A P A P+PG + PR A P P P R+
Sbjct: 534 VPPS--------PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP----PPPPSRSPS 581
Query: 138 GRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGK 197
L GP + A S +E+RG + EG +P E
Sbjct: 582 STLS--GPDLAGHSSSATST--------------PEELRGYDSGPEGGAAASPPPDAELA 625
Query: 198 SCGERRPGPGTNQPL----WPASLSPWRP 222
+C G PL P + PW P
Sbjct: 626 ACHPAAWSRGPAPPLAFRGAPGAPLPWPP 654
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.0 bits (92), Expect = 0.004
Identities = 66/229 (28%), Positives = 89/229 (38%), Gaps = 33/229 (14%)
Query: 12 AVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSA 71
A P P P AARE PL P PP+ PAP +++ P P +PQ A R G+A
Sbjct: 194 AGPRRAPPPAVAAREPPL---PPPPQPPAPPQQQ----QPPPPQPQPPPEGGAVRAGGAA 246
Query: 72 -VVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCP- 129
V ++V LGG G R AR R R + P P
Sbjct: 247 RPVSLREVVRYLGG--SGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPG 304
Query: 130 --EPALRAQLGRLDRRGPQHRVQRALALSAGLED----------AHLPCLSPRPSQEM-- 175
PA A+ R +RG + RV ED + +P S RP+
Sbjct: 305 RAPPAASARPSR-SKRGGEERVLEKEEEEDDDEDEDEEDDVSEGSEVP-ESDRPAGAQHH 362
Query: 176 -----RGEATAREGPREGAPTGCPEGKSCGE-RRPGPGTNQPLWPASLS 218
RG +A+E +E P G +G+ G PG GT Q A+++
Sbjct: 363 QLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMN 411
Score = 33.5 bits (75), Expect = 0.36
Identities = 50/190 (26%), Positives = 61/190 (32%), Gaps = 36/190 (18%)
Query: 12 AVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLG---PVPWRPQRHNGDEASRLF 68
A P PR AA AP PGP + P P +R L P P P R
Sbjct: 143 AAPARAPRAAAAAATAPPS--PGPAQ-PGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Query: 69 GSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALC 128
V A++ PL P PA P + P P + R RP +L
Sbjct: 200 PPPAVAAREPPLP-------PPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSL- 251
Query: 129 PEPALR------AQLGRLDRRGPQHRVQRALALSAGLEDAHL---------------PCL 167
+R GRL R Q ++ A LE L P
Sbjct: 252 -REVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAA 310
Query: 168 SPRPSQEMRG 177
S RPS+ RG
Sbjct: 311 SARPSRSKRG 320
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/187 (26%), Positives = 65/187 (34%), Gaps = 12/187 (6%)
Query: 12 AVPGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSA 71
A P E P P A P PP P G R PV +P +L GS
Sbjct: 1186 AGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQ--PVPKLQGSP 1243
Query: 72 VVKAQQVPLSLGGHLRGAPDAEPAR----PAEGARPSPGTRARKTRPRARTASTRRPCAL 127
+++VPL G +P+ + A P P P T + + A S +
Sbjct: 1244 TPTSKKVPLPGPG----SPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSP 1299
Query: 128 CPEPALR--AQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGP 185
P PA + A L + P A S G H+P PR + A A P
Sbjct: 1300 APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP 1359
Query: 186 REGAPTG 192
EGA G
Sbjct: 1360 PEGASPG 1366
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 39.7 bits (91), Expect = 0.005
Identities = 53/172 (30%), Positives = 65/172 (37%), Gaps = 23/172 (13%)
Query: 56 PQRHNGDEASRLFG---SAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPS---PGTRA 109
P + +G R G S V A++ PL G LR P PA P G P P A
Sbjct: 2 PNKASGRRQGRARGRPHSQVSLARRAPLMFGPGLRDPPPPRPAPPRPGEEPGNRHPPPPA 61
Query: 110 RKTRP---RARTAS-----TRRPCALCPEPALRAQLGRLDRRGPQHRV------QRALAL 155
+T P RAR S R P P RA G R + RV A A
Sbjct: 62 ARTHPGSCRARCPSPAAGGLRGPWTAAP-GRQRADEGAAAARPERQRVWARRLPGSAAAP 120
Query: 156 SAGLEDAHLPCLSPRPSQEMR-GEATAREGPREGA-PTGCPEGKSCGERRPG 205
+ G + LP P P + R A GP + A P+ P +S RPG
Sbjct: 121 APGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAPRSRPAPRPG 172
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.7 bits (91), Expect = 0.005
Identities = 60/198 (30%), Positives = 74/198 (37%), Gaps = 26/198 (13%)
Query: 81 SLGGHL-----RGAPDAEPARPAEGA-----RPSPGTRARK---TRPRARTASTRRPC-- 125
+LG H+ GA A PA PAEGA P P RAR R S RRP
Sbjct: 57 ALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVP 116
Query: 126 ALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGP 185
A PA + + G V A A++AG E A P + A GP
Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 186 REGAPTGCPEGKSCGERRPGPGTNQPLWPASLSPWRPYWEFPALVCFPIHEHP----PRA 241
G G GK GPG Q L ++ + PA+ ++ P P
Sbjct: 177 GPGPGPGPGPGKPA-----GPGAAQTLNGSAALLNSHHAAAPAVSL--VNNGPAALLPLP 229
Query: 242 SWARHLDTVQTPPGVGAA 259
A +QTPP VGAA
Sbjct: 230 KPAAPGTVIQTPPFVGAA 247
Score = 39.7 bits (91), Expect = 0.005
Identities = 80/319 (25%), Positives = 100/319 (31%), Gaps = 73/319 (22%)
Query: 12 AVPGE--QPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVP-----WRPQRHNGDEA 64
A PG Q P A P P PP PAP P P RP H
Sbjct: 232 AAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291
Query: 65 SRLFGSAVVKAQQVPLSLGGHLRGAPDAEPA-RPAEG------ARPSPGTRARKTRPRAR 117
+ A VP G+ A PA PA G +P PG A P +
Sbjct: 292 T--------AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVK 343
Query: 118 TASTRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
S +R P A + LA S A + P +
Sbjct: 344 AESPKRVVQAAPPAA------------------QTLAASGPASTAASMVIGPTMQGALPS 385
Query: 178 EATAREGPREGAPTGCPEGKSCG-----ERRP---GPGTNQPLWPASLSPWRPYWEFPAL 229
A A P G PTG P+G + R P G L P L+P P
Sbjct: 386 PA-AVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLP------- 437
Query: 230 VCFPIHEHPPRASWARHLDTVQTPPGVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAH 289
PP+ ++ Q PPG+ +E QLL + P+Q L + QAH
Sbjct: 438 -------QPPQN--PTNIQNFQLPPGMVLVRSENGQLLMI-----PQQALAQ--MQAQAH 481
Query: 290 RSRGLQNSPH-ALSASCPP 307
+P A S PP
Sbjct: 482 AQPQTTMAPRPATPTSAPP 500
Score = 37.4 bits (85), Expect = 0.025
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 16/104 (15%)
Query: 185 PREGAPTGCPEGKSCGERRPG---------PGTNQPLWPASLSP----WRPYWEFPALVC 231
P EGAP PE G RPG P +PL PA +P RP E A C
Sbjct: 78 PAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSC 137
Query: 232 FPIHEHPPRASWARHLDTVQTPPGVGAAGAEILQLLALGEGRGP 275
P+ P A+ A + P A A + G G GP
Sbjct: 138 APV---PAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP 178
Score = 37.0 bits (84), Expect = 0.033
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 14 PGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVP-----WRPQRHNGDEASRLF 68
PG P P A R P G P P P+P RR GP P P + + +
Sbjct: 83 PGAAPEPPPAGRARPGGGGPQRPGPPSP-RRPLVPAGPAPPAAKLRPPPEGSAGSCAPVP 141
Query: 69 GSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPG 106
+A V A P G P A AR G P PG
Sbjct: 142 AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPG 179
Score = 32.7 bits (73), Expect = 0.62
Identities = 60/193 (31%), Positives = 65/193 (33%), Gaps = 35/193 (18%)
Query: 23 AAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQVPLSL 82
AAR P PGP P PG G G P Q NG A L S A V L
Sbjct: 167 AARAGP---GPGPGPGPGPGPGPGKPAG--PGAAQTLNGSAA--LLNSHHAAAPAVSLVN 219
Query: 83 GGHLRGAPDAEPARPAE--------GARPSPGTRARKTRPRARTASTRRPCALCPEPALR 134
G P +PA P GA P A P A A A P P
Sbjct: 220 NGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAA--PSPPAAPAPAAPAAAPPPPPPAP 277
Query: 135 AQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCP 194
A L R P H AG A P + P + + G A A P A G P
Sbjct: 278 ATLA----RPPGH--------PAGPPTA-APAVPPPAAAQNGGSAGAAPAPAPAA--GGP 322
Query: 195 EGKSCGERRPGPG 207
G S +PGPG
Sbjct: 323 AGVS---GQPGPG 332
>gi|239749938 PREDICTED: hypothetical protein XP_002347218 [Homo
sapiens]
Length = 201
Score = 39.3 bits (90), Expect = 0.007
Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 33 PGP-PRWPAPGRRRGFRLGPVPWRPQR--HNGDEASRLFGSAVVKAQQVPLSLGGHLRGA 89
PGP PR P G G P+ PQR +G SR+ S+ + + PL H
Sbjct: 56 PGPQPRQPLHGEPAGL-WRPLGTPPQRSPQSGQGVSRVRASS--GSPEPPLVRCSHAGLR 112
Query: 90 PDAEPA---RPAEGARPSP-GTRARKTRPRARTASTRRPCALCPEPALRAQLGRL-DRRG 144
P+A A P + P+P GT ++ A +AS L + R G RR
Sbjct: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRA 172
Query: 145 PQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
P VQR+ AL AG DA L PR S+ RG
Sbjct: 173 PAVFVQRSAALVAG--DAR--TLLPRCSRRARG 201
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 39.3 bits (90), Expect = 0.007
Identities = 54/204 (26%), Positives = 74/204 (36%), Gaps = 24/204 (11%)
Query: 20 PEKAAREAPLKGYPGPPRWPAPGRRRGF-RLGPVPWRPQRHNGDEASRLFGSAVV--KAQ 76
P + R P P PP PA G+ G + V W+ G++ +R +A + A+
Sbjct: 154 PPSSLRLLPPTPRPFPPA-PAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLGDPAR 212
Query: 77 QVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAST--------------- 121
+ + G R P RPA + PSP R R+R +
Sbjct: 213 EAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGL 272
Query: 122 -RRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
RR A CP A A+LG RG R +RA AG S R + +
Sbjct: 273 WRRKPAPCPRGACAARLGG---RGTG-RARRAEFRVAGPRGVAEEAESGRGWRSWPSFSA 328
Query: 181 AREGPREGAPTGCPEGKSCGERRP 204
G P GC GK+ E P
Sbjct: 329 VSGGGESPDPAGCSRGKAAPEEPP 352
>gi|239744260 PREDICTED: hypothetical protein XP_002343086 [Homo
sapiens]
Length = 201
Score = 39.3 bits (90), Expect = 0.007
Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 33 PGP-PRWPAPGRRRGFRLGPVPWRPQR--HNGDEASRLFGSAVVKAQQVPLSLGGHLRGA 89
PGP PR P G G P+ PQR +G SR+ S+ + + PL H
Sbjct: 56 PGPQPRQPLHGEPAGL-WRPLGTPPQRSPQSGQGVSRVRASS--GSPEPPLVRCSHAGLR 112
Query: 90 PDAEPA---RPAEGARPSP-GTRARKTRPRARTASTRRPCALCPEPALRAQLGRL-DRRG 144
P+A A P + P+P GT ++ A +AS L + R G RR
Sbjct: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRA 172
Query: 145 PQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
P VQR+ AL AG DA L PR S+ RG
Sbjct: 173 PAVFVQRSAALVAG--DAR--TLLPRCSRRARG 201
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 39.3 bits (90), Expect = 0.007
Identities = 54/204 (26%), Positives = 74/204 (36%), Gaps = 24/204 (11%)
Query: 20 PEKAAREAPLKGYPGPPRWPAPGRRRGF-RLGPVPWRPQRHNGDEASRLFGSAVV--KAQ 76
P + R P P PP PA G+ G + V W+ G++ +R +A + A+
Sbjct: 154 PPSSLRLLPPTPRPFPPA-PAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLGDPAR 212
Query: 77 QVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAST--------------- 121
+ + G R P RPA + PSP R R+R +
Sbjct: 213 EAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGL 272
Query: 122 -RRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEAT 180
RR A CP A A+LG RG R +RA AG S R + +
Sbjct: 273 WRRKPAPCPRGACAARLGG---RGTG-RARRAEFRVAGPRGVAEEAESGRGWRSWPSFSA 328
Query: 181 AREGPREGAPTGCPEGKSCGERRP 204
G P GC GK+ E P
Sbjct: 329 VSGGGESPDPAGCSRGKAAPEEPP 352
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 38.9 bits (89), Expect = 0.009
Identities = 51/168 (30%), Positives = 60/168 (35%), Gaps = 24/168 (14%)
Query: 27 APLKGYPGPPRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVKAQQVPLSLGGHL 86
AP + P P AP + P P RP+ SR A A+ +PL LG
Sbjct: 453 APPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLG--- 509
Query: 87 RGAPDAEPARPAEGARPSPGTRARKTRPRARTASTRRPCALCPEPALRA------QLGRL 140
A P RPA +P P + RP R AS R P P P L R+
Sbjct: 510 ----RAPPPRPAV-EQPPPKVYVTRVRPGQR-ASPRAPAPRAPWPPFPGVFLHPRPLPRV 563
Query: 141 DRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREG 188
R P R R G A PRP A A +G REG
Sbjct: 564 QLRAPP-RPPRPHGRRTGGPQA----TQPRPP----ARAQATQGGREG 602
Score = 32.0 bits (71), Expect = 1.1
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 14 PGEQPRPEKAAREAPLKGYPGPPRWPAPGRRRGFRLGPVPWRP--QRHNGDEASRLFGSA 71
PG++ P A AP +PG P P R R P P RP +R G +A++ A
Sbjct: 532 PGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPA 591
Query: 72 VVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTR 108
+A Q GG A PA P + S R
Sbjct: 592 RAQATQ-----GGREGQARTLGPAAPTVDSNLSSEAR 623
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 38.9 bits (89), Expect = 0.009
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 34/176 (19%)
Query: 69 GSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPG-----TRARKTRPRARTASTRR 123
GS V Q PL P EP++PA + P P ++K P + ++
Sbjct: 160 GSVVSPELQTPL---------PSPEPSKPASVSSPEPPKSVPVCESQKLAP-VPSPEPQK 209
Query: 124 PCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRP-------SQEMR 176
P + PE +++A L + H + SA ++ + SP P S E R
Sbjct: 210 PAPVSPE-SVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESR 268
Query: 177 GEA-TAREGPREGAPTGCPE------GKSCGERRPGPGTNQPLW----PASLSPWR 221
A T PR+ +P+ PE S RRP P + W P S PW+
Sbjct: 269 KSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWK 324
Score = 30.4 bits (67), Expect = 3.1
Identities = 50/209 (23%), Positives = 73/209 (34%), Gaps = 35/209 (16%)
Query: 16 EQPRPEKAAREAPLKGYPGP-PRWPAPGRRRGFRLGPVPWRPQRHNGDEASRLFGSAVVK 74
E P+ L P P P+ PAP + +PQ+ + G
Sbjct: 186 EPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQS--HFPETLGPPSAS 243
Query: 75 AQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRARTAS-TRRPCALCPEPAL 133
+ + P+ A EP P+ A P AR T P R S + P P PA+
Sbjct: 244 SPESPVL-------AASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAV 296
Query: 134 RAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGC 193
P+ R + A A+S G P SPRP + ++ P + AP+
Sbjct: 297 ----------SPEPR-RPAPAVSPGSWKPGPPG-SPRPWKSNPSASSGPWKPAKPAPS-- 342
Query: 194 PEGKSCGERRPGPGTNQPLWPASLSPWRP 222
PG +P+ S PW+P
Sbjct: 343 ----------VSPGPWKPIPSVSPGPWKP 361
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 38.5 bits (88), Expect = 0.011
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 93 EPARPAEGARPSPGTRARKTRPRARTAST----------RRPCALCPEPALRAQLGRLDR 142
EPA P+ G R S TR R T RA + RRP P P R G + R
Sbjct: 45 EPAAPS-GVRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRP----PSPEAR---GPVPR 96
Query: 143 RGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGER 202
R +R+LA P +SP P G A A GPR+G ++ E
Sbjct: 97 SSAASRARRSLAS---------PGISPGPLTATIGGAVAGGGPRQG------RAEAHKEV 141
Query: 203 RPGPGTNQPLWPASLSPWRPYWEFPAL 229
PG + P L W W P++
Sbjct: 142 FPGQRVGKMAAPMELFCWSGGWGLPSV 168
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 38.5 bits (88), Expect = 0.011
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 93 EPARPAEGARPSPGTRARKTRPRARTAST----------RRPCALCPEPALRAQLGRLDR 142
EPA P+ G R S TR R T RA + RRP P P R G + R
Sbjct: 45 EPAAPS-GVRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRP----PSPEAR---GPVPR 96
Query: 143 RGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGER 202
R +R+LA P +SP P G A A GPR+G ++ E
Sbjct: 97 SSAASRARRSLAS---------PGISPGPLTATIGGAVAGGGPRQG------RAEAHKEV 141
Query: 203 RPGPGTNQPLWPASLSPWRPYWEFPAL 229
PG + P L W W P++
Sbjct: 142 FPGQRVGKMAAPMELFCWSGGWGLPSV 168
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,405,720
Number of Sequences: 37866
Number of extensions: 1321082
Number of successful extensions: 7879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 6963
Number of HSP's gapped (non-prelim): 1382
length of query: 412
length of database: 18,247,518
effective HSP length: 105
effective length of query: 307
effective length of database: 14,271,588
effective search space: 4381377516
effective search space used: 4381377516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.