BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239754969 PREDICTED: hypothetical protein [Homo sapiens] (184 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754969 PREDICTED: hypothetical protein [Homo sapiens] 397 e-111 gi|239749517 PREDICTED: hypothetical protein [Homo sapiens] 397 e-111 gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo ... 397 e-111 gi|121583542 mitogen-activated protein kinase kinase kinase 15 [... 44 8e-05 gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 42 2e-04 gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 42 2e-04 gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 40 9e-04 gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 40 0.001 gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 40 0.001 gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 40 0.001 gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 40 0.001 gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 39 0.002 gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... 38 0.004 gi|46488935 interferon alpha/beta receptor 2 isoform b precursor... 37 0.010 gi|19923129 interferon alpha/beta receptor 2 isoform b precursor... 37 0.010 gi|24308547 hypothetical protein LOC196500 [Homo sapiens] 37 0.013 gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 36 0.021 gi|151301154 mucin 6, gastric [Homo sapiens] 35 0.036 gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 35 0.048 gi|19924099 synapsin I isoform Ia [Homo sapiens] 35 0.048 gi|19924097 synapsin I isoform Ib [Homo sapiens] 35 0.048 gi|194306647 protein phosphatase 1, regulatory subunit 14D isofo... 34 0.062 gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer... 34 0.081 gi|45387951 transmembrane protein 108 [Homo sapiens] 33 0.11 gi|210147493 transmembrane protein 108 [Homo sapiens] 33 0.11 gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 33 0.11 gi|149588643 zinc finger protein 283 [Homo sapiens] 33 0.11 gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 33 0.14 gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 33 0.14 gi|50428940 mediator complex subunit 25 [Homo sapiens] 33 0.14 >gi|239754969 PREDICTED: hypothetical protein [Homo sapiens] Length = 184 Score = 397 bits (1021), Expect = e-111 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH Sbjct: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 Query: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC Sbjct: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 Query: 181 SAVA 184 SAVA Sbjct: 181 SAVA 184 >gi|239749517 PREDICTED: hypothetical protein [Homo sapiens] Length = 184 Score = 397 bits (1021), Expect = e-111 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH Sbjct: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 Query: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC Sbjct: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 Query: 181 SAVA 184 SAVA Sbjct: 181 SAVA 184 >gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo sapiens] Length = 184 Score = 397 bits (1021), Expect = e-111 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH Sbjct: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 Query: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC Sbjct: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120 Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180 Query: 181 SAVA 184 SAVA Sbjct: 181 SAVA 184 >gi|121583542 mitogen-activated protein kinase kinase kinase 15 [Homo sapiens] Length = 788 Score = 43.9 bits (102), Expect = 8e-05 Identities = 20/28 (71%), Positives = 21/28 (75%), Gaps = 4/28 (14%) Query: 154 PPRFKRFSCLSLPSSWDYRVS----LCC 177 PPRFKRFSCLSL SSWDY +S CC Sbjct: 40 PPRFKRFSCLSLQSSWDYSLSKFDERCC 67 >gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] Length = 402 Score = 42.4 bits (98), Expect = 2e-04 Identities = 17/18 (94%), Positives = 17/18 (94%) Query: 154 PPRFKRFSCLSLPSSWDY 171 PP FKRFSCLSLPSSWDY Sbjct: 323 PPGFKRFSCLSLPSSWDY 340 >gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] Length = 402 Score = 42.4 bits (98), Expect = 2e-04 Identities = 17/18 (94%), Positives = 17/18 (94%) Query: 154 PPRFKRFSCLSLPSSWDY 171 PP FKRFSCLSLPSSWDY Sbjct: 323 PPGFKRFSCLSLPSSWDY 340 >gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapiens] Length = 440 Score = 40.4 bits (93), Expect = 9e-04 Identities = 16/19 (84%), Positives = 17/19 (89%) Query: 154 PPRFKRFSCLSLPSSWDYR 172 PP FK+FSCL LPSSWDYR Sbjct: 378 PPGFKQFSCLILPSSWDYR 396 >gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] Length = 825 Score = 39.7 bits (91), Expect = 0.001 Identities = 15/20 (75%), Positives = 19/20 (95%) Query: 156 RFKRFSCLSLPSSWDYRVSL 175 RF++FSCLSLPS+WDYRV + Sbjct: 800 RFQQFSCLSLPSTWDYRVKI 819 >gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] Length = 819 Score = 39.7 bits (91), Expect = 0.001 Identities = 15/20 (75%), Positives = 19/20 (95%) Query: 156 RFKRFSCLSLPSSWDYRVSL 175 RF++FSCLSLPS+WDYRV + Sbjct: 794 RFQQFSCLSLPSTWDYRVKI 813 >gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo sapiens] Length = 402 Score = 39.7 bits (91), Expect = 0.001 Identities = 16/18 (88%), Positives = 16/18 (88%) Query: 154 PPRFKRFSCLSLPSSWDY 171 PP FKRFSCLSLPSSW Y Sbjct: 323 PPGFKRFSCLSLPSSWGY 340 >gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] Length = 402 Score = 39.7 bits (91), Expect = 0.001 Identities = 16/18 (88%), Positives = 16/18 (88%) Query: 154 PPRFKRFSCLSLPSSWDY 171 PP FKRFSCLSLPSSW Y Sbjct: 323 PPGFKRFSCLSLPSSWGY 340 >gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens] Length = 1079 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/25 (68%), Positives = 19/25 (76%) Query: 154 PPRFKRFSCLSLPSSWDYRVSLCCP 178 PP FKRFS LSLP+SW+YR CP Sbjct: 1010 PPGFKRFSHLSLPNSWNYRHLPSCP 1034 >gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase isoform 3 [Homo sapiens] Length = 500 Score = 38.1 bits (87), Expect = 0.004 Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 154 PPRFKRFSCLSLPSSWDYR 172 PP F F+CLSLPSSWDYR Sbjct: 13 PPGFTPFACLSLPSSWDYR 31 >gi|46488935 interferon alpha/beta receptor 2 isoform b precursor [Homo sapiens] Length = 331 Score = 37.0 bits (84), Expect = 0.010 Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178 P K+ SCLS PSSWDY+ + CP Sbjct: 306 PELKQSSCLSFPSSWDYKRASLCP 329 >gi|19923129 interferon alpha/beta receptor 2 isoform b precursor [Homo sapiens] Length = 331 Score = 37.0 bits (84), Expect = 0.010 Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178 P K+ SCLS PSSWDY+ + CP Sbjct: 306 PELKQSSCLSFPSSWDYKRASLCP 329 >gi|24308547 hypothetical protein LOC196500 [Homo sapiens] Length = 282 Score = 36.6 bits (83), Expect = 0.013 Identities = 42/142 (29%), Positives = 50/142 (35%), Gaps = 31/142 (21%) Query: 15 PQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRH------TPHPDMQTRAP 68 P LLLP P S P TPPAP A G P +PRH P P R P Sbjct: 19 PLLLLPLPPPAQGSSSSPRTPPAPARPPCARGG----PSAPRHVCVWERAPPPSRSPRVP 74 Query: 69 WHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQE- 127 ++ G P AT G EG ++ W + GP V +E Sbjct: 75 -----RSRRQVLPGTAPP-----------ATPSGFEEGPP--SSQYPWAIVWGPTVSRED 116 Query: 128 --ADNFCRPGDVSPAPDAPPGL 147 N PG + AP GL Sbjct: 117 GGDPNSANPGFLDYGFAAPHGL 138 >gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] Length = 2217 Score = 35.8 bits (81), Expect = 0.021 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 1 MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLL---------FLGATGSSWNT 51 +P P +P Q +PPQ +LP +P+L QP PP P L L + T Sbjct: 962 LPPQPVLPPQPTRPPQPVLP---PQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAAT 1018 Query: 52 PGSPRHTPHP 61 PGS HP Sbjct: 1019 PGSQILLGHP 1028 Score = 35.0 bits (79), Expect = 0.036 Identities = 44/156 (28%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 1 MPQGPAIPA-QGQKPPQLLLPFP-----GSRPLLSLQPSTPPAPLLFLGATGSSWNTPGS 54 MP GP PA GQ+PP L P P +P++ LQP P P A + G+ Sbjct: 717 MPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPA-----SQVGA 771 Query: 55 PRHTPHPDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALA 114 P P +AP AQ PP +A ++G+ A L Sbjct: 772 PAQL-KPLQMPQAPLQPLAQV------PPQMPPIPVVPPITPLAGIDGL---PPALPDLP 821 Query: 115 TWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLTLR 150 T V P Q + P +P P A P L L+ Sbjct: 822 TATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQ 857 Score = 34.3 bits (77), Expect = 0.062 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGS---RPLLSLQPSTPPAPLL 40 P PA+P Q PPQ +LP + +P+L QP+ PP P+L Sbjct: 939 PPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVL 980 Score = 34.3 bits (77), Expect = 0.062 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 1 MPQGPAIPAQGQKPPQLLLPFPGSR---PLLSLQPSTPPAPLL 40 +P P +P Q PPQ +LP +R P+L QP PP P+L Sbjct: 950 LPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVL 992 Score = 29.6 bits (65), Expect = 1.5 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 6/131 (4%) Query: 35 PPAPLLFLGATGSSWNTPGSPR-HTPHPDMQTRAPWHGAAQAHLSSAE----GDGRPPFK 89 PP PL + PG P P D P + L+S G G + Sbjct: 567 PPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTSATSLASDSTFDSGQGSTVYS 626 Query: 90 QQLSHLEVATVEGIVEGGDAFA-ALATWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLT 148 S + + + + + A + + V GPV+ Q + + AP P G Sbjct: 627 DSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSV 686 Query: 149 LRPTCPPRFKR 159 P CPP ++ Sbjct: 687 PAPACPPSLQQ 697 Score = 27.7 bits (60), Expect = 5.8 Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 31/161 (19%) Query: 5 PAIPAQGQKP----PQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60 P P Q P P L P P + P L LQ P P PG+P P Sbjct: 827 PVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHP-------------PGAPLAMPC 873 Query: 61 PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLS-HLEVATVEGIVEGGDAFAALATWVVH 119 + AP A L+ A PP LS H VA + G AF +A V Sbjct: 874 RTIVPNAP---ATIPLLAVA-----PPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVP 925 Query: 120 CGP--VVQQEADNFCRPGDVSPAPDAPPGLTL--RPTCPPR 156 P VQ +P + P P PP L +PT PP+ Sbjct: 926 PSPHHTVQNMRATPPQPA-LPPQPTLPPQPVLPPQPTLPPQ 965 >gi|151301154 mucin 6, gastric [Homo sapiens] Length = 2439 Score = 35.0 bits (79), Expect = 0.036 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 9/58 (15%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTP 59 P P +P G +P Q+ P G+ + L ST P+P SS +TP SP TP Sbjct: 1205 PTTPQLPTTGSRPTQVW-PMTGTSTTIGLLSSTGPSP--------SSNHTPASPTQTP 1253 >gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] Length = 931 Score = 34.7 bits (78), Expect = 0.048 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPHP 61 PQGP++ +G PP L+ G+ +L++ +P L G+ + PGSP P Sbjct: 644 PQGPSL-IKGVAPPTLITDSTGTHLVLTVTNKNADSPGLSSGSPQQPSSQPGSPAPAPSA 702 Query: 62 DMQTRAP 68 M P Sbjct: 703 QMDLEHP 709 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 34.7 bits (78), Expect = 0.048 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPLLS---LQPSTPPAPLLFLGATGSSWNTP-----G 53 P GP PAQ + PPQ P PG P LQ PP L G +P Sbjct: 452 PAGP--PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLP 509 Query: 54 SPRHTP-HPDMQTRAPWHGAAQAHLSSAEGDGRPP 87 SP P P Q P G + A G G PP Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 34.7 bits (78), Expect = 0.048 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPLLS---LQPSTPPAPLLFLGATGSSWNTP-----G 53 P GP PAQ + PPQ P PG P LQ PP L G +P Sbjct: 452 PAGP--PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLP 509 Query: 54 SPRHTP-HPDMQTRAPWHGAAQAHLSSAEGDGRPP 87 SP P P Q P G + A G G PP Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544 >gi|194306647 protein phosphatase 1, regulatory subunit 14D isoform 2 [Homo sapiens] Length = 200 Score = 34.3 bits (77), Expect = 0.062 Identities = 14/20 (70%), Positives = 15/20 (75%) Query: 154 PPRFKRFSCLSLPSSWDYRV 173 PP F RFSCLS SSWDY + Sbjct: 106 PPGFNRFSCLSSWSSWDYGI 125 >gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 [Homo sapiens] Length = 530 Score = 33.9 bits (76), Expect = 0.081 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 10/68 (14%) Query: 30 LQPSTPPAPL-LFLGATGSSWNTPGSPRHTP---HPDMQTRAPWH------GAAQAHLSS 79 LQ P PL GA G SW PG P P H + R P+ GAA A + Sbjct: 83 LQQCNPDGPLGAAAGAAGGSWGRPGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAG 142 Query: 80 AEGDGRPP 87 G PP Sbjct: 143 MAGVAAPP 150 >gi|45387951 transmembrane protein 108 [Homo sapiens] Length = 575 Score = 33.5 bits (75), Expect = 0.11 Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 25/144 (17%) Query: 22 PGSRPLLSLQPS-TPPAPLLFLGATGSSWNTPGSPRHTPHPDMQTRAPWHGAAQAHLSSA 80 P R L + PS TPP ++ A SS TP+PD P AA + Sbjct: 32 PSPRESLQVLPSGTPPGTMVT--APHSSTRHTSVVMLTPNPD---GPPSQAAAPMATPTP 86 Query: 81 EGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQEADNFCRP-----G 135 +G PP +H ++T+ V + ++L+T GP A +P G Sbjct: 87 RAEGHPP-----THT-ISTIAATVTAPHSESSLST-----GPAPAAMATTSSKPEGRPRG 135 Query: 136 DVSPAP--DAPPGLTLRP-TCPPR 156 +P PPG T RP T PPR Sbjct: 136 QAAPTILLTKPPGATSRPTTAPPR 159 >gi|210147493 transmembrane protein 108 [Homo sapiens] Length = 575 Score = 33.5 bits (75), Expect = 0.11 Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 25/144 (17%) Query: 22 PGSRPLLSLQPS-TPPAPLLFLGATGSSWNTPGSPRHTPHPDMQTRAPWHGAAQAHLSSA 80 P R L + PS TPP ++ A SS TP+PD P AA + Sbjct: 32 PSPRESLQVLPSGTPPGTMVT--APHSSTRHTSVVMLTPNPD---GPPSQAAAPMATPTP 86 Query: 81 EGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQEADNFCRP-----G 135 +G PP +H ++T+ V + ++L+T GP A +P G Sbjct: 87 RAEGHPP-----THT-ISTIAATVTAPHSESSLST-----GPAPAAMATTSSKPEGRPRG 135 Query: 136 DVSPAP--DAPPGLTLRP-TCPPR 156 +P PPG T RP T PPR Sbjct: 136 QAAPTILLTKPPGATSRPTTAPPR 159 >gi|57863314 vacuolar protein sorting 37C [Homo sapiens] Length = 355 Score = 33.5 bits (75), Expect = 0.11 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 2 PQGPAIPAQGQKPPQLLLP----FPGS-RPLLSLQPSTPPAP 38 PQ PA G KPP + P FPG +P + LQP PP P Sbjct: 297 PQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGP 338 >gi|149588643 zinc finger protein 283 [Homo sapiens] Length = 679 Score = 33.5 bits (75), Expect = 0.11 Identities = 14/18 (77%), Positives = 14/18 (77%) Query: 154 PPRFKRFSCLSLPSSWDY 171 PP F FSCLSL SSWDY Sbjct: 23 PPGFTLFSCLSLLSSWDY 40 >gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] Length = 1096 Score = 33.1 bits (74), Expect = 0.14 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 9/51 (17%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPL---------LSLQPSTPPAPLLFLG 43 P P +P G PP P PG PL + P PP PLLF G Sbjct: 552 PAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602 >gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] Length = 1101 Score = 33.1 bits (74), Expect = 0.14 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 9/51 (17%) Query: 2 PQGPAIPAQGQKPPQLLLPFPGSRPL---------LSLQPSTPPAPLLFLG 43 P P +P G PP P PG PL + P PP PLLF G Sbjct: 552 PAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602 >gi|50428940 mediator complex subunit 25 [Homo sapiens] Length = 747 Score = 33.1 bits (74), Expect = 0.14 Identities = 45/162 (27%), Positives = 58/162 (35%), Gaps = 25/162 (15%) Query: 12 QKPPQLLLPFPGSRPLLSLQPSTPPAPL------------LFLGATGSSWNTPGSPRHTP 59 +K P L L F + P L+P PP + L L G S PG + Sbjct: 186 RKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGS--APGPLQSKQ 243 Query: 60 HPDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQ------LSHLEVATVEGIVEGGDAFAAL 113 + AP + A LS+A PP Q LS +VA + + A L Sbjct: 244 PVPLPPAAP----SGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGL 299 Query: 114 ATWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPP 155 P+ QQ A P +PAP PPG P PP Sbjct: 300 GPRFSPITPL-QQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340 Score = 31.2 bits (69), Expect = 0.53 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%) Query: 2 PQGPAIPAQGQKPPQLLL--PFPGSRPLLSLQPSTPPAPLLFLGATGSSWN---TPGSPR 56 PQGP A G PP +L PG+ P L PP P + +S + PG+P Sbjct: 618 PQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPA 677 Query: 57 HTPHPDMQTRAPWHGAAQAHLSSAE 81 P P P G H A+ Sbjct: 678 LLPPPHQGLGQPQLGPPLLHPPPAQ 702 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.136 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,992,093 Number of Sequences: 37866 Number of extensions: 672627 Number of successful extensions: 3601 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 198 Number of HSP's that attempted gapping in prelim test: 3267 Number of HSP's gapped (non-prelim): 525 length of query: 184 length of database: 18,247,518 effective HSP length: 96 effective length of query: 88 effective length of database: 14,612,382 effective search space: 1285889616 effective search space used: 1285889616 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.