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Search of human proteins with 239754516
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 671 0.0
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 659 0.0
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 648 0.0
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 648 0.0
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 64 2e-10
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 58 1e-08
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 58 1e-08
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 50 4e-06
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 48 1e-05
gi|116734704 interferon regulatory factor 2 binding protein 2 is... 48 1e-05
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 48 1e-05
gi|239752280 PREDICTED: similar to family with sequence similari... 48 1e-05
gi|210032463 family with sequence similarity 48, member B2 [Homo... 48 1e-05
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 47 2e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 47 2e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 46 4e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 46 4e-05
gi|48762934 alpha 2 type I collagen [Homo sapiens] 45 7e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 45 7e-05
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 45 7e-05
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 45 7e-05
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|110681708 zinc finger protein 579 [Homo sapiens] 45 1e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|7705268 family with sequence similarity 8, member A1 [Homo sa... 44 3e-04
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 43 3e-04
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 43 3e-04
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 43 3e-04
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 43 3e-04
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 671 bits (1730), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1 MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
Query: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
Query: 181 GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 659 bits (1701), Expect = 0.0
Identities = 331/334 (99%), Positives = 331/334 (99%)
Query: 1 MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
MWVLTMFKNKTTCL GSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1 MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
Query: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGG RPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
Query: 181 GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
GRSEPSTRACAVSG QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 648 bits (1672), Expect = 0.0
Identities = 326/329 (99%), Positives = 326/329 (99%)
Query: 6 MFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
MFKNKTTCL GSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60
Query: 66 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEP 185
EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGG RPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180
Query: 186 STRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
STRACAVSG QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240
Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300
Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 648 bits (1672), Expect = 0.0
Identities = 326/329 (99%), Positives = 326/329 (99%)
Query: 6 MFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
MFKNKTTCL GSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60
Query: 66 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEP 185
EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGG RPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180
Query: 186 STRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
STRACAVSG QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240
Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300
Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 63.9 bits (154), Expect = 2e-10
Identities = 82/268 (30%), Positives = 106/268 (39%), Gaps = 41/268 (15%)
Query: 17 SDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERG 76
+D A + S++DG R + +EA P P ++EKG P P R ERG
Sbjct: 416 TDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPE----REAETEPERG 471
Query: 77 ADHQ-----ERPAGAPA-----------HRPV-----PAAAAILRAA----VHRVLRVLR 111
A + P+ APA HRP PAA+ L AA V L
Sbjct: 472 AGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLD 531
Query: 112 AAAAVRDAERGLRREGP----RRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPA 167
A AA + + R E P R AP RK RG A L A R PRP
Sbjct: 532 AEAAAPERPKAERAEAPPAGAERAAPERK---AERGGAELRGAKKFSVSSCR-ARPRPGV 587
Query: 168 LVPVPLATPLLLEGRSEPSTRA-CAVSGRQAALLGAHVRPAPDRAARCAPR--AKKAGAN 224
P+ A+ L RS P R+ A+ Q H +P P + A P+ +A +
Sbjct: 588 SRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASP 647
Query: 225 AGARGQGRGAAAGP-ERPPHVQGRRPAP 251
AG R + AAA P R P + PAP
Sbjct: 648 AGPRKSPQEAAAAPGTREPCPAAQEPAP 675
Score = 30.4 bits (67), Expect = 2.3
Identities = 77/329 (23%), Positives = 101/329 (30%), Gaps = 60/329 (18%)
Query: 31 GDRRGLGREAAPGAPAEGEKEK----GKNSRRPRPTC-SRGRTERGRVERGADHQERPAG 85
G + G A P APA + E+ ++ P PT G T + A + A
Sbjct: 369 GKQDGEAPPAGPCAPATDKAEEVVCAPEDVASPFPTAIPEGDTTPPETDPAATSEAPSAR 428
Query: 86 APAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
R VP A + D E+G GP + RGA
Sbjct: 429 DGPERSVPKEAE-------------PTPPVLPDEEKG--PPGPAPEPEREAETEPERGAG 473
Query: 146 GLVSAGHLGREPPRGGGPRPPALVPV-----------PLATPLLLEGRSEPSTRACAVSG 194
+G EP P PPA P A+P L S P
Sbjct: 474 --TEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLD 531
Query: 195 RQAALLGAHVRPAPDRAA-------RCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGR 247
+AA A RP +RA R AP K A RG + + + P
Sbjct: 532 AEAA---APERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVS 588
Query: 248 RPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP----AAGTPRCLQQEGATQVA 303
RP R + A G V ++ E +G+P A PR L + G
Sbjct: 589 RPLERASGRLPLARSGPVWRS-------EAALDDLQGLPEPQHAKPGPRKLAERGPQDSG 641
Query: 304 VRLPLVSVLVRHDGPLPLSAAALGAPGLR 332
R + GP A APG R
Sbjct: 642 DRAASPA------GPRKSPQEAAAAPGTR 664
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 57.8 bits (138), Expect = 1e-08
Identities = 90/288 (31%), Positives = 108/288 (37%), Gaps = 39/288 (13%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
G RG GR A A EG +G +R R R G +G +P+ G
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755
Query: 87 PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
P AA + + VH + V L AAAAV + RG R+G R A + A
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813
Query: 146 GLVSAGHLGREP--PRGGGPRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGR 195
++ GH RGGG A PLA ++ GR RA A +GR
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
Q A G R A + A C + A A A A QG AA G P QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RP RG RRA AV AGG AR R G A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974
Score = 42.4 bits (98), Expect = 6e-04
Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)
Query: 66 GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
GR E R R G HQ +R G HRP+P
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
G R +G A P Q+ GR V A + + P G VPV L +
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787
Query: 181 GRSE-----PSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
GR + A G Q A GA + + +AG GARG G AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835
Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
GP VQ R A R VGAR AG R R G
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895
Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
C QQ RH P +AAA A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918
Score = 32.7 bits (73), Expect = 0.47
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Query: 54 KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
+ R P + + R +G H+ GAP+HR P A R + R L
Sbjct: 898 RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955
Query: 114 AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVP 170
A A G RR G + A + +L G + +V+A + RG PR AL
Sbjct: 956 AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015
Query: 171 VPLATPLL 178
P LL
Sbjct: 1016 RPELEELL 1023
Score = 29.3 bits (64), Expect = 5.2
Identities = 54/196 (27%), Positives = 67/196 (34%), Gaps = 41/196 (20%)
Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRG-------------GGPRP 165
A+ LR R H ++RG RG AG AG L P RG GG
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAPHGGAHE 493
Query: 166 PALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
LV VP L G + A A +G L A V+ + R A + AG +
Sbjct: 494 HVLVAVPATGVGGLVGAGQ---GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHV 550
Query: 226 GARGQGRGAA----------AGPERPPHVQGRRPAPRGAVGARRALLGA-------VGKA 268
G+ A A P V G GA+G R L+ A +
Sbjct: 551 EVVPVGQQLAICMLHGQLGTAPHAHVPTVLG------GALGGRAGLVAAPARRECPARRR 604
Query: 269 GGLTRARETRRRGEEG 284
GG R RR G G
Sbjct: 605 GGCWPRRPRRRHGGGG 620
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 57.8 bits (138), Expect = 1e-08
Identities = 90/288 (31%), Positives = 108/288 (37%), Gaps = 39/288 (13%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
G RG GR A A EG +G +R R R G +G +P+ G
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755
Query: 87 PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
P AA + + VH + V L AAAAV + RG R+G R A + A
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813
Query: 146 GLVSAGHLGREP--PRGGGPRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGR 195
++ GH RGGG A PLA ++ GR RA A +GR
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
Q A G R A + A C + A A A A QG AA G P QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RP RG RRA AV AGG AR R G A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974
Score = 42.4 bits (98), Expect = 6e-04
Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)
Query: 66 GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
GR E R R G HQ +R G HRP+P
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
G R +G A P Q+ GR V A + + P G VPV L +
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787
Query: 181 GRSE-----PSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
GR + A G Q A GA + + +AG GARG G AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835
Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
GP VQ R A R VGAR AG R R G
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895
Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
C QQ RH P +AAA A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918
Score = 32.7 bits (73), Expect = 0.47
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Query: 54 KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
+ R P + + R +G H+ GAP+HR P A R + R L
Sbjct: 898 RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955
Query: 114 AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVP 170
A A G RR G + A + +L G + +V+A + RG PR AL
Sbjct: 956 AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015
Query: 171 VPLATPLL 178
P LL
Sbjct: 1016 RPELEELL 1023
Score = 29.3 bits (64), Expect = 5.2
Identities = 54/196 (27%), Positives = 67/196 (34%), Gaps = 41/196 (20%)
Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRG-------------GGPRP 165
A+ LR R H ++RG RG AG AG L P RG GG
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAPHGGAHE 493
Query: 166 PALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
LV VP L G + A A +G L A V+ + R A + AG +
Sbjct: 494 HVLVAVPATGVGGLVGAGQ---GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHV 550
Query: 226 GARGQGRGAA----------AGPERPPHVQGRRPAPRGAVGARRALLGA-------VGKA 268
G+ A A P V G GA+G R L+ A +
Sbjct: 551 EVVPVGQQLAICMLHGQLGTAPHAHVPTVLG------GALGGRAGLVAAPARRECPARRR 604
Query: 269 GGLTRARETRRRGEEG 284
GG R RR G G
Sbjct: 605 GGCWPRRPRRRHGGGG 620
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 49.7 bits (117), Expect = 4e-06
Identities = 82/304 (26%), Positives = 107/304 (35%), Gaps = 67/304 (22%)
Query: 21 GVTCRVSSQDGDRRGLGR------EAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVE 74
GV + + G RR LGR EA+PG + +G R P P R + G+
Sbjct: 71 GVGAALLALPGSRR-LGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK-- 127
Query: 75 RGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAV----RDAERGLRREGPRR 130
RPA A P P ++ R V +R + R R R RR
Sbjct: 128 -------RPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRR 179
Query: 131 HAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGP----RPPALVPVPLATPLLLEGRSEPS 186
P L+ R G+A PPR P R P+L P P
Sbjct: 180 PLPKPPPLQPRLGSA----------SPPRLAAPLAGSRAPSLSPFP-------------- 215
Query: 187 TRACAVSGRQAALLGAHVRPAPDRAAR----CAPRAKKAGANAGARGQGRGAAAGPERPP 242
R C ++ H P P +R R ++ G RG+ +G A G PP
Sbjct: 216 -RRCRRRAERSP--AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALG--SPP 270
Query: 243 HVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPR------CLQQ 296
G PA G G RRA + GG + +G EGV TPR CL+
Sbjct: 271 IPAG--PAAPGRAGERRAARQWRKRGGGPGVSPREGAQG-EGVRGGVTPRARGSSTCLRP 327
Query: 297 EGAT 300
AT
Sbjct: 328 SPAT 331
Score = 29.6 bits (65), Expect = 3.9
Identities = 35/126 (27%), Positives = 42/126 (33%), Gaps = 9/126 (7%)
Query: 156 EPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCA 215
+P P P P A P +L P TRA G A V A
Sbjct: 24 QPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGV----GAALLAL 79
Query: 216 PRAKKAG-ANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRA 274
P +++ G R G A G R GR P PR RRA A + RA
Sbjct: 80 PGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPR----RRRAPSSAGKRPAAAARA 135
Query: 275 RETRRR 280
R+R
Sbjct: 136 APPRQR 141
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 49.3 bits (116), Expect = 5e-06
Identities = 71/272 (26%), Positives = 105/272 (38%), Gaps = 38/272 (13%)
Query: 27 SSQDGDRRGLGREAAP--GAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA 84
S D D++G REA G G ++K RRP+P ++ RG ++ ++R
Sbjct: 197 SRGDEDKKGRQREAKSRFGKTRGGRRKK---HRRPKPAAGGAKSRRGGGKK--PQKQRRR 251
Query: 85 GAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGA 144
G A + R + LR AA+ A+R R P + RG RG
Sbjct: 252 GQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKR---RGAATAGEKPAAKGRGGRGP 308
Query: 145 AGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQ-------A 197
L G+ P G G + P R + +T+A A ++ A
Sbjct: 309 KSLG-----GQNPRWGRGGKKP-------------RRRGQKATKAAAAGTKRGGGGQQKA 350
Query: 198 ALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGA 257
A++G R R + PR +KA A AGA+ +G G G R PR
Sbjct: 351 AVVGVKSRKKQRRRGK-KPRRQKASA-AGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPR 408
Query: 258 RRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RRA K G +++ RRRG + + G
Sbjct: 409 RRAQKAPAAKPRG-GGSKKPRRRGPKAAKSRG 439
Score = 44.7 bits (104), Expect = 1e-04
Identities = 72/285 (25%), Positives = 100/285 (35%), Gaps = 42/285 (14%)
Query: 38 REAAPGAPAEGEKEKGKNSRRPRPTCSRGR---TERGRVERGADHQERPAGAPAHRPVPA 94
R A + G K + ++PR + R E G RG Q R + A
Sbjct: 429 RRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRG 488
Query: 95 AAAILRAAVHRVLRVLRAAAAVRDAE----RGLRREGPRRHAPPRKQLRGRRG------- 143
+ + R +A AA A + R+ PRR P + R G
Sbjct: 489 GGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQR 548
Query: 144 ----AAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSG----- 194
AAG S G G + RGGG P A G + A +G
Sbjct: 549 QKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSR 608
Query: 195 ----------RQAALLGAHVRPAP-DRAARCAPRAKKAGANAGARGQGRGAAAGPERPPH 243
++AA GA R P R + A A+KA A GA +G G + P
Sbjct: 609 SGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGSGG-----KQPR 662
Query: 244 VQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAA 288
Q +PA G+ + A +G +A R R + RG+ G AA
Sbjct: 663 WQ--KPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAA 705
Score = 40.0 bits (92), Expect = 0.003
Identities = 69/280 (24%), Positives = 97/280 (34%), Gaps = 55/280 (19%)
Query: 32 DRRGLGREAAPGAPAEGEKEKGKNSRRPR-----PTCSRGRTERGRVERGADHQERPAGA 86
+ RG G + A A G K G R+PR + + R R ++ A + GA
Sbjct: 99 ENRGGGEQKAAAA---GTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGA 155
Query: 87 PAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR----------EGPRRHAPPR- 135
A + AAA + + + A A R ++ RR +G +R A R
Sbjct: 156 GAQKAA-AAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRF 214
Query: 136 -KQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSG 194
K GRR G + RGGG +P + R
Sbjct: 215 GKTRGGRRKKHRRPKPAAGGAKSRRGGGKKP-----------------QKQRRRG----- 252
Query: 195 RQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGA 254
Q A G R R + ++ G NA G R AA G +PA +G
Sbjct: 253 -QKAATGGKSRVGKSRGGG-DKKLRRQGQNAALAGAKRRGAA-------TAGEKPAAKGR 303
Query: 255 VGARRALLGAVGKAGGLTRARETRRRGEEG--VPAAGTPR 292
G LG G ++ RRRG++ AAGT R
Sbjct: 304 GGRGPKSLGGQNPRWG-RGGKKPRRRGQKATKAAAAGTKR 342
Score = 39.7 bits (91), Expect = 0.004
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 36/247 (14%)
Query: 20 AGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADH 79
AGVT + S DG ++ R+ A G A+ K+ + ++ + G RG+
Sbjct: 602 AGVT-KSRSGDGGKKAW-RQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGS-- 656
Query: 80 QERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLR 139
G PAAA +A AAA ++AE R+ PRR +
Sbjct: 657 ----GGKQPRWQKPAAAGSESSA---------AAAVGQEAEA---RKKPRRRRAKSRGDG 700
Query: 140 GRRGAAGLVSAGHLGREP----PRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGR 195
G+ A G+ G++P RGGG +S S A + SG+
Sbjct: 701 GQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSG---------GAKSRGSGGAKSRSGK 751
Query: 196 QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGR-RPAPRGA 254
+AA +H R R ++G A G + AAAG ++PP V+ R + A
Sbjct: 752 KAAASKSHGGGGAKRR-RGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAA 810
Query: 255 VGARRAL 261
G ++ L
Sbjct: 811 AGGKKPL 817
Score = 35.4 bits (80), Expect = 0.072
Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 48/196 (24%)
Query: 107 LRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPP 166
LR + A A ++A + ++ A R + AAG S G GR+P R G
Sbjct: 73 LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRG----- 127
Query: 167 ALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAG 226
G +P RA +++A G+ R A A+KA A AG
Sbjct: 128 --------QKAAATGSKKPRWRA-----QKSAAAGSKNRGA---------GAQKAAAAAG 165
Query: 227 ARGQG-----RGAAAGPERPPHVQGRRPAPRGA--------VGARRALLGAVGKAGGLTR 273
+ QG + AAAG + G++P RGA G +R GK G R
Sbjct: 166 VKSQGGEKPQKAAAAGAKSR---SGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRR 222
Query: 274 ARETRRRGEEGVPAAG 289
+ R + PAAG
Sbjct: 223 KKHRRPK-----PAAG 233
Score = 33.1 bits (74), Expect = 0.36
Identities = 49/193 (25%), Positives = 67/193 (34%), Gaps = 22/193 (11%)
Query: 137 QLRGRRGAAGLVSAGHLGREPPR-GGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGR 195
Q GR G + A L R P PAL +L G + + A G+
Sbjct: 11 QAAGRAGPGAPLGAA-LARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGK 69
Query: 196 QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAV 255
+A L G A A + +A AG G + AAA + +GR+P RG
Sbjct: 70 KARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK 129
Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVSVLVRH 315
A A G RA+++ G + A Q+ A V+
Sbjct: 130 AA------ATGSKKPRWRAQKSAAAGSKNRGAGA------QKAAAAAGVK--------SQ 169
Query: 316 DGPLPLSAAALGA 328
G P AAA GA
Sbjct: 170 GGEKPQKAAAAGA 182
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 48.1 bits (113), Expect = 1e-05
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGPRPPALVPV------PLATPLLL 179
P PP + G + L L R+ P R G PP LVP+ PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205
Query: 180 EGRSEPS------TRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
GR+ S T A ++ Q LGAH RPA ++A + R
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253
Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
AAA ++PP R PA + A A L A G A ++R GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296
>gi|116734704 interferon regulatory factor 2 binding protein 2
isoform A [Homo sapiens]
Length = 587
Score = 48.1 bits (113), Expect = 1e-05
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGPRPPALVPV------PLATPLLL 179
P PP + G + L L R+ P R G PP LVP+ PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205
Query: 180 EGRSEPS------TRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
GR+ S T A ++ Q LGAH RPA ++A + R
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253
Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
AAA ++PP R PA + A A L A G A ++R GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 47.8 bits (112), Expect = 1e-05
Identities = 70/257 (27%), Positives = 96/257 (37%), Gaps = 37/257 (14%)
Query: 24 CRVSSQDGDRRGLG-------------REAAPGAPAEGEKE----KGKNSRRPRPTCSRG 66
C+ + G RRG G E A APA ++ + + + P PT S
Sbjct: 41 CQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGH 100
Query: 67 RTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVL-RVLRAAAAVRDAERGLRR 125
RTE+ + Q +PAG R ++ A R R AAAA RG R
Sbjct: 101 RTEK---RKRLQLQCQPAGGTGQRRGSRSSP--SADQQRAQDREEEAAAAPVPTSRGHRT 155
Query: 126 EGPRRHAPPRKQLRG---RRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGR 182
E +R P R+ G RRG+ SA G + A P P + E R
Sbjct: 156 EKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDRE----EEAAAAPAPTSRGHRTEKR 211
Query: 183 SEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPP 242
+P C +G G+ P+ D+ R R ++A A +G +R P
Sbjct: 212 -KPQQPQCRPAGGTGQRRGSRSSPSADQ-QRAQDREEEAAAAPAPTSRGHRT---EKRKP 266
Query: 243 HVQGRRPAPRGAVGARR 259
RRPA G G RR
Sbjct: 267 QQPQRRPA--GGTGQRR 281
>gi|239752280 PREDICTED: similar to family with sequence similarity
48, member B2 [Homo sapiens]
Length = 779
Score = 47.8 bits (112), Expect = 1e-05
Identities = 59/209 (28%), Positives = 79/209 (37%), Gaps = 38/209 (18%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
GK + P P ++ + G++ G + AG+P RP PAAA + AA
Sbjct: 417 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 475
Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPA 167
AAAAV A G ++ + P + RR AAG RP
Sbjct: 476 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 518
Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--RQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
V + P + +A V G R A +LG +P AP A A A
Sbjct: 519 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 568
Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
G G G ++ GP RP VQ PAP
Sbjct: 569 GISGSGLQSSGGPLPDARPGAVQASSPAP 597
Score = 30.0 bits (66), Expect = 3.0
Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)
Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRA 189
+H PPR QL ++G +S+G+ PP+ G P P P A P +
Sbjct: 421 KHPPPRTQLPS---SSGKISSGN--SFPPQQAGS--PLKRPFPAAAPAV----------- 462
Query: 190 CAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
A PAP A AP A A A G + P P RR
Sbjct: 463 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 510
Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
PA P V A+ G G E RG + + + P +Q G+ A
Sbjct: 511 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 568
Query: 306 LPLVSVLVRHDGPLP 320
S L GPLP
Sbjct: 569 GISGSGLQSSGGPLP 583
>gi|210032463 family with sequence similarity 48, member B2 [Homo
sapiens]
Length = 817
Score = 47.8 bits (112), Expect = 1e-05
Identities = 59/209 (28%), Positives = 79/209 (37%), Gaps = 38/209 (18%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
GK + P P ++ + G++ G + AG+P RP PAAA + AA
Sbjct: 455 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 513
Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPA 167
AAAAV A G ++ + P + RR AAG RP
Sbjct: 514 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 556
Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--RQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
V + P + +A V G R A +LG +P AP A A A
Sbjct: 557 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 606
Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
G G G ++ GP RP VQ PAP
Sbjct: 607 GISGSGLQSSGGPLPDARPGAVQASSPAP 635
Score = 30.0 bits (66), Expect = 3.0
Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)
Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRA 189
+H PPR QL ++G +S+G+ PP+ G P P P A P +
Sbjct: 459 KHPPPRTQLPS---SSGKISSGN--SFPPQQAGS--PLKRPFPAAAPAV----------- 500
Query: 190 CAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
A PAP A AP A A A G + P P RR
Sbjct: 501 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 548
Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
PA P V A+ G G E RG + + + P +Q G+ A
Sbjct: 549 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 606
Query: 306 LPLVSVLVRHDGPLP 320
S L GPLP
Sbjct: 607 GISGSGLQSSGGPLP 621
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 47.4 bits (111), Expect = 2e-05
Identities = 87/372 (23%), Positives = 128/372 (34%), Gaps = 61/372 (16%)
Query: 16 GSDTAGVTCRVSSQDGDRR--------------GLGREAAPGAPAEGEKEKGKNS----- 56
G+ + TC SSQ G RR GLGR A G P K +S
Sbjct: 623 GASSTPSTC-TSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHSPLDSS 681
Query: 57 ---RRPRPTCSRGRTERGRVER--GADHQERPAGAPAHRP-----------VPAAAAILR 100
+ PRP R + G V R G+ R + RP + ++A +
Sbjct: 682 VTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSGSLPSQDLLGTSSATVT 741
Query: 101 AAVH----RVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGRE 156
AVH + A +A + G R P P + GAA L G R+
Sbjct: 742 PAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASL---GEEARD 798
Query: 157 PPRGGGP------RPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDR 210
P+ P RP P + + ++P+ A +A+ L P P R
Sbjct: 799 TPQPSSPLVLQVGRPEQGAVGPHRSHCCSQPGTQPAQEAQRGPSPEASWLCGRYCPTPPR 858
Query: 211 AARCAPRAKKAGANAGARGQ--GRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKA 268
C R + + G+ Q RG P+ G P+P GA R + G
Sbjct: 859 GRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAG 918
Query: 269 G-GLTRARETRRRG-------EEGVPAAGTPRCLQQEGATQVAVRLPLVSVLVRHDGPLP 320
GL+ + R G GV + PR + + +P +L+ ++
Sbjct: 919 SRGLSEEKTLRSGGGPQGQEEASGVSPSSLPRSSPEAVVREWLDNIPEEPILMTYELADE 978
Query: 321 LSAAALGAPGLR 332
+ AA G GLR
Sbjct: 979 TTGAAGG--GLR 988
Score = 29.6 bits (65), Expect = 3.9
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 15/135 (11%)
Query: 160 GGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAK 219
GGG R P + P LEG EP A +G+Q+ P P+ A +
Sbjct: 984 GGGLRGPEVDP---GDDHSLEGLGEP-----AQAGQQSLEGDPGQDPEPEGALL---GSS 1032
Query: 220 KAGANAGARGQGRGAAAG--PERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARET 277
G +G G +GAA E P R AP G + RAL G V + + RA
Sbjct: 1033 DTGPQSG-EGVPQGAAPEGVSEAPAEAGADREAPAGCRVSLRALPGRVSASTQIMRALMG 1091
Query: 278 RRRGE-EGVPAAGTP 291
++G VP P
Sbjct: 1092 SKQGRPSSVPEVSRP 1106
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 47.0 bits (110), Expect = 2e-05
Identities = 84/288 (29%), Positives = 96/288 (33%), Gaps = 48/288 (16%)
Query: 34 RGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRV-ERGADHQERPAGAPAHRPV 92
+GL A P A E+G P S R ERG ERG PAG
Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 702
Query: 93 PAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS-AG 151
P + G + AP + + G RGAAGL G
Sbjct: 703 PGNDGA-------------------KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 743
Query: 152 HLGREPPRGGGPRP----------PALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLG 201
G P+G P P P P P +G S PS A R A G
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP-GDKGESGPSGPAGPTGARGAP--G 800
Query: 202 AHVRPAPDRAARCA--------PRAKKAGANAGARGQ-GRGAAAGPERPPHVQGRRPAPR 252
P P A A P AK +AGA+G G AGP PP G AP
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAP- 859
Query: 253 GAVGARRAL--LGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEG 298
GA GAR + GA G G R G G P G P +EG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPP--GPPGPAGKEG 905
Score = 41.2 bits (95), Expect = 0.001
Identities = 75/266 (28%), Positives = 89/266 (33%), Gaps = 65/266 (24%)
Query: 37 GREAAPGAPAEGEKEKGKNSR-------RPRPTCSRGRTERGRVERGADHQERPAGAPAH 89
G PG P KE GK R RP G E+G+ + PAGAP
Sbjct: 890 GNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG-EKGSPGADGPAGAPG- 947
Query: 90 RPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS 149
P P A R V GL + RG RG GL
Sbjct: 948 TPGPQGIAGQRGVV------------------GLPGQ------------RGERGFPGLPG 977
Query: 150 -AGHLGREPPRG-GGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPA 207
+G G++ P G G R P P P+ P L E SGR+ A GA P
Sbjct: 978 PSGEPGKQGPSGASGERGP---PGPMGPPGLAGPPGE--------SGREGA-PGAEGSPG 1025
Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR----PA----PRGAVGARR 259
D + + G G A GP P G R PA P G VGAR
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGAR- 1084
Query: 260 ALLGAVGKAGGLTRARETRRRGEEGV 285
G G G ET +G+ G+
Sbjct: 1085 ---GPAGPQGPRGDKGETGEQGDRGI 1107
Score = 39.3 bits (90), Expect = 0.005
Identities = 58/203 (28%), Positives = 65/203 (32%), Gaps = 35/203 (17%)
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLA----TPLLLEG 181
EGP+ PR G RG AG + +P G P PP P P L G
Sbjct: 111 EGPKGDTGPR----GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYG 166
Query: 182 RSEPSTRACAVSGRQA-----ALLGAHVRPAPD--RAARCAPRAKKAGANAGARGQ---- 230
E ST +V G L G P P + P A G RG
Sbjct: 167 YDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226
Query: 231 ---------GRGAAAGPERPPHVQGRR--PAPRGAVGAR-----RALLGAVGKAGGLTRA 274
G+ G PP QG R P G G + L GA G AG
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPK 286
Query: 275 RETRRRGEEGVPAAGTPRCLQQE 297
E GE G P PR L E
Sbjct: 287 GEPGSPGENGAPGQMGPRGLPGE 309
Score = 38.9 bits (89), Expect = 0.007
Identities = 69/284 (24%), Positives = 86/284 (30%), Gaps = 38/284 (13%)
Query: 37 GREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAA 96
G + PG P E R P + + + G + P G R +P A
Sbjct: 200 GFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259
Query: 97 AILRAAVHRVLRVLRAA--------------------AAVRDAERGLRREGPRRHAPPRK 136
+ HR L A A + RGL E R AP
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
Query: 137 QLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQ 196
RG GA G +AG G P G P A+ A P G P
Sbjct: 320 GARGNDGATG--AAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQ---------- 367
Query: 197 AALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR-PAPRGAV 255
G P P A A A GA+ +G A G P G R P+
Sbjct: 368 ----GVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 423
Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEG-VPAAGTPRCLQQEG 298
G G G+ G +T +GE G V G P +EG
Sbjct: 424 GGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEG 467
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/166 (31%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 132 APPRKQLRGRRGAAGLVSA----GHLGREPPRGGGPRP-PALVPVPLATPLLLEGRSEPS 186
AP K G +G G V G G E RG P P +P P R P
Sbjct: 438 APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Query: 187 TRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG-QGRGAAAGPER---PP 242
A A G+ P + A R +AG GA+G G + GP+ PP
Sbjct: 498 ADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL-PGAKGLTGSPGSPGPDGKTGPP 556
Query: 243 HVQGR--RPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
G+ RP P G GAR G +G G A E + GE GVP
Sbjct: 557 GPAGQDGRPGPPGPPGAR-GQAGVMGFPGPKGAAGEPGKAGERGVP 601
Score = 38.1 bits (87), Expect = 0.011
Identities = 86/322 (26%), Positives = 107/322 (33%), Gaps = 63/322 (19%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRT-ERG----RVERGADHQERPAG 85
G+ +G + PG PA E ++G P PT G ERG R GAD P G
Sbjct: 449 GEPGPVGVQGPPG-PAGEEGKRGARGE-PGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506
Query: 86 APAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
R P A + A R E GL P K L G G+
Sbjct: 507 PAGERGSPGPAGPKGSP----------GEAGRPGEAGL---------PGAKGLTGSPGSP 547
Query: 146 GLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVR 205
G G G P G RP P P P + A +A G
Sbjct: 548 G--PDGKTGPPGPAGQDGRPGP--PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV--- 600
Query: 206 PAPDRAARCAPRAKKAGAN--------AGARGQGRGAAA-------GPERPPHVQGRRPA 250
P P A A + +AGA AG RG+ A + GP PP G+ P
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK-PG 659
Query: 251 PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVS 310
+G G LGA G +G RG +G P PR A
Sbjct: 660 EQGVPGD----LGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGA------- 708
Query: 311 VLVRHDGPLPLSAAALGAPGLR 332
+ D P + + GAPGL+
Sbjct: 709 ---KGDAGAPGAPGSQGAPGLQ 727
Score = 31.2 bits (69), Expect = 1.4
Identities = 58/198 (29%), Positives = 64/198 (32%), Gaps = 49/198 (24%)
Query: 118 DAERGLRREGPRRHAPPRKQLRGRRGAAGLVSA----GHLGREPPRG----GGPRPPALV 169
D E G R P + RG G AGL G G + +G GP+
Sbjct: 232 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS 291
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG 229
P P + R P R GR A P P AGARG
Sbjct: 292 PGENGAPGQMGPRGLPGER-----GRPGA-------PGP----------------AGARG 323
Query: 230 Q-GRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPA- 287
G AAGP P G P GAVGA+ G G G RGE G P
Sbjct: 324 NDGATGAAGPPGPTGPAGPPGFP-GAVGAK----GEAGPQGPRGSEGPQGVRGEPGPPGP 378
Query: 288 ------AGTPRCLQQEGA 299
AG P Q GA
Sbjct: 379 AGAAGPAGNPGADGQPGA 396
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 46.2 bits (108), Expect = 4e-05
Identities = 76/274 (27%), Positives = 96/274 (35%), Gaps = 69/274 (25%)
Query: 41 APGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILR 100
AP K +R PRP R R E RG ERPA + + P A +L
Sbjct: 207 APEGSVASLLPSAKPARAPRPA-PRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLA 265
Query: 101 AAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRG 160
+AV L A+ A R PP L+ R G+A PPR
Sbjct: 266 SAVS-----LAASLA--------------RSPPP---LQPRLGSA----------SPPRL 293
Query: 161 GGP----RPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAAR--- 213
P R P+L P P R C ++ H P P +R
Sbjct: 294 AAPLAGSRAPSLSPFP---------------RRCRRRAERSP--AGHGLPLPRSLSRGGE 336
Query: 214 -CAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLT 272
R ++ G RG+ +G A G PP G PA G G RRA + GG
Sbjct: 337 VVGARRRRGGEERRVRGRRQGCALG--SPPIPAG--PAAPGRAGERRAARQWRKRGGGPG 392
Query: 273 RARETRRRGEEGVPAAGTPR------CLQQEGAT 300
+ +G EGV TPR CL+ AT
Sbjct: 393 VSPREGAQG-EGVRGGVTPRARGSSTCLRPSPAT 425
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 46.2 bits (108), Expect = 4e-05
Identities = 76/274 (27%), Positives = 96/274 (35%), Gaps = 69/274 (25%)
Query: 41 APGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILR 100
AP K +R PRP R R E RG ERPA + + P A +L
Sbjct: 207 APEGSVASLLPSAKPARAPRPA-PRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLA 265
Query: 101 AAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRG 160
+AV L A+ A R PP L+ R G+A PPR
Sbjct: 266 SAVS-----LAASLA--------------RSPPP---LQPRLGSA----------SPPRL 293
Query: 161 GGP----RPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAAR--- 213
P R P+L P P R C ++ H P P +R
Sbjct: 294 AAPLAGSRAPSLSPFP---------------RRCRRRAERSP--AGHGLPLPRSLSRGGE 336
Query: 214 -CAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLT 272
R ++ G RG+ +G A G PP G PA G G RRA + GG
Sbjct: 337 VVGARRRRGGEERRVRGRRQGCALG--SPPIPAG--PAAPGRAGERRAARQWRKRGGGPG 392
Query: 273 RARETRRRGEEGVPAAGTPR------CLQQEGAT 300
+ +G EGV TPR CL+ AT
Sbjct: 393 VSPREGAQG-EGVRGGVTPRARGSSTCLRPSPAT 425
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 45.4 bits (106), Expect = 7e-05
Identities = 74/279 (26%), Positives = 90/279 (32%), Gaps = 52/279 (18%)
Query: 34 RGLGREAAP-GAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPV 92
RGL E P G+ E + S P+ E R G P G P R
Sbjct: 342 RGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGS 401
Query: 93 PAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGH 152
P + + A D G+ R A +RG G AG G
Sbjct: 402 PGSRGLPGA----------------DGRAGVMGPPGSRGASGPAGVRGPNGDAG--RPGE 443
Query: 153 LGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAA 212
G PRG P + P P+ L G + GR + A R P
Sbjct: 444 PGLMGPRGLPGSPGNIGPAGKEGPVGLPG----------IDGRPGPIGPAGARGEPGNIG 493
Query: 213 RCAPRAKKA--GAN--------AGARG----QGRGAAAGPERPPHVQGRR-----PAPRG 253
P+ G N AGARG G A GP P VQG + P P G
Sbjct: 494 FPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPG 553
Query: 254 AVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPR 292
G L G G AG + + E GE G+P PR
Sbjct: 554 FQG----LPGPSGPAGEVGKPGERGLHGEFGLPGPAGPR 588
Score = 35.0 bits (79), Expect = 0.094
Identities = 71/275 (25%), Positives = 95/275 (34%), Gaps = 56/275 (20%)
Query: 37 GREAAPGAPA-EGEKEKGKNSRRPRPTCSRGRT-ERGRV-------ERGADHQERPAGAP 87
G + PGAP +GE + P T +RG ERGRV RG+D P G
Sbjct: 187 GLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPA 246
Query: 88 AHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGL 147
P+ +A A + + GP A PR ++ G G +G
Sbjct: 247 G--PIGSAGP----------PGFPGAPGPKGEIGAVGNAGPAGPAGPRGEV-GLPGLSGP 293
Query: 148 VSAGHLGREPPRG-GGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRP 206
V G G G G + A +P P L R P A + L+G P
Sbjct: 294 V--GPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVG---EP 348
Query: 207 APDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR--------------PAPR 252
P AG+ + +G +AGP+ PP G P P
Sbjct: 349 GP------------AGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPP 396
Query: 253 GAVGA--RRALLGAVGKAGGLTRARETRRRGEEGV 285
G G+ R L GA G+AG + G GV
Sbjct: 397 GLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGV 431
Score = 33.9 bits (76), Expect = 0.21
Identities = 47/175 (26%), Positives = 62/175 (35%), Gaps = 42/175 (24%)
Query: 125 REGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRG-----------GGPRPPALVPVPL 173
+ G + HA L G RGA G G+ G + P G G P PP +P
Sbjct: 506 KNGDKGHAG----LAGARGAPG--PDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLP- 558
Query: 174 ATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKA--GANAGARGQG 231
G S P+ R L G P P PR ++ G + A G
Sbjct: 559 -------GPSGPAGEVGKPGER--GLHGEFGLPGP-----AGPRGERGPPGESGAAGPTG 604
Query: 232 RGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
+ GP PP G + P ++GAVG AG + RG G+P
Sbjct: 605 PIGSRGPSGPPGPDGNKGEP--------GVVGAVGTAGPSGPSGLPGERGAAGIP 651
Score = 31.2 bits (69), Expect = 1.4
Identities = 63/224 (28%), Positives = 74/224 (33%), Gaps = 41/224 (18%)
Query: 117 RDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATP 176
R ERG+ R P L G +G G L +P G P P TP
Sbjct: 152 RPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPG-APGENGTP 210
Query: 177 LLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAA 236
R P R GR A P P A G++ G
Sbjct: 211 GQTGARGLPGER-----GRVGA-------PGP---------AGARGSDGSVGPVGPAGPI 249
Query: 237 GPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPA----AGTPR 292
G PP G P P+G +GA VG AG A RGE G+P G P
Sbjct: 250 GSAGPPGFPGA-PGPKGEIGA-------VGNAGP---AGPAGPRGEVGLPGLSGPVGPPG 298
Query: 293 CLQQEGAT--QVAVRLPLVSVLVRHDGP--LPLSAAALGAPGLR 332
G T + A LP V+ GP +P A GA G R
Sbjct: 299 NPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGAR 342
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 45.4 bits (106), Expect = 7e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGPRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G RP A P P +
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 176 PLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
R+ P+ AP AAR AP RA G+ G+RGQG
Sbjct: 132 ----SARASPAP------------------AAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 45.4 bits (106), Expect = 7e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGPRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G RP A P P +
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 176 PLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
R+ P+ AP AAR AP RA G+ G+RGQG
Sbjct: 132 ----SARASPAP------------------AAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 45.4 bits (106), Expect = 7e-05
Identities = 65/225 (28%), Positives = 85/225 (37%), Gaps = 26/225 (11%)
Query: 40 AAPGAPAEGEKEKGKNSRRPRPTCSRGRTER---GRVERGADHQERPAGAPAHRPV---- 92
AAP + + +PRP+ +E G + A RPA P RP
Sbjct: 109 AAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSP 168
Query: 93 -PAAAAILRAAVHRVLRVLRAAAAVRD--AERGLRREGPRRHAPPRKQLRGRRGAAGLVS 149
P R AV V+ VL A R AE GLRR+G R P+ RGR G +V
Sbjct: 169 RPVRGPHPRRAV--VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQ---RGRGGLLLVVL 223
Query: 150 AGHLGREPPRGGGPRPPALVPVPLATPLLLEG--------RSEPSTRACAVSGRQAA--L 199
+ P G GP P PV + P + + RS P R A AA L
Sbjct: 224 HAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPL 283
Query: 200 LGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHV 244
G P+ A R + ++ GAR G A +P H+
Sbjct: 284 QGGATLPSSLPAPRLHLGSLLPSSSGGAR-LGDAAGTTHFQPAHL 327
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 45.4 bits (106), Expect = 7e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGPRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G RP A P P +
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 176 PLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
R+ P+ AP AAR AP RA G+ G+RGQG
Sbjct: 132 ----SARASPAP------------------AAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|110681708 zinc finger protein 579 [Homo sapiens]
Length = 562
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/171 (29%), Positives = 68/171 (39%), Gaps = 25/171 (14%)
Query: 21 GVTCRVSSQDGDRRGLGREAAPGAPAEGEK-----EKGKNSRR-------------PRP- 61
G C +S+ G+ + G +AAP P GE E GK RR RP
Sbjct: 354 GAECGGASEGGEGQN-GGDAAPARPPAGEPRFWCPECGKGFRRRAHLRQHGVTHSGARPF 412
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAA--VHRVLRVLRAAAAVRDA 119
C R + E R+ A H + AG PA P P A + R R RA A
Sbjct: 413 QCVRCQREFKRLADLARHAQVHAGGPAPHPCPRCPRRFSRAYSLLRHQRCHRAELERAAA 472
Query: 120 ERGLRREGPRRHAPPRKQLRGRRGAAGL-VSAGHLGREPPRGGGP--RPPA 167
+ L+ + P PP L+ + GL + ++ EPP G P PPA
Sbjct: 473 LQALQAQAPTSPPPPPPPLKAEQEEEGLPLPLANIKEEPPSPGTPPQSPPA 523
Score = 29.3 bits (64), Expect = 5.2
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 16/90 (17%)
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG 229
P+ L PL G+ + SG + + G P A C GA+ G G
Sbjct: 322 PLSLLAPLPAAGKKDDKA-----SGARNSAKG----PEGGEGAECG------GASEGGEG 366
Query: 230 QGRGAAAGPERPPHVQGRRPAPRGAVGARR 259
Q G AA P RPP + R P G RR
Sbjct: 367 QNGGDAA-PARPPAGEPRFWCPECGKGFRR 395
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 43.9 bits (102), Expect = 2e-04
Identities = 90/326 (27%), Positives = 121/326 (37%), Gaps = 60/326 (18%)
Query: 33 RRGLGREAA-------PGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAG 85
RRG+ R A PG+ G++ PR R R G GA AG
Sbjct: 126 RRGILRPLAEREERRVPGSTRAAALPGGRDKPGPR----RPRAAPG-ARSGAAASVAAAG 180
Query: 86 APA---HRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLR-REGPRRHAPPRKQLRG- 140
P PAA R A+ + L + AAA + E G R + PR++
Sbjct: 181 GTRLAQQAPFPAARCRRRGAIRKPLHDVTAAAFIVLVELLFAITSGERAASAPRQESHNF 240
Query: 141 RRGAAGLVSAGHLGREPPRGGGP----RPPALVPVPLATPLLLEGRSEPSTRACAVSGRQ 196
+G A +G R P GGP PP +P P+ P P T A ++G
Sbjct: 241 AKGCAEFYGSG--ARAQP--GGPCWAQGPPGRLPDPIPLP-----TRAPRTSA-GLAGVG 290
Query: 197 AALLGAHVRPAPDRAARCAPRA---KKAGANAGARGQ-GRGAAAGPERPPHVQGRR---P 249
+ G P RA R AP + ++ G+R + G GA GP P QG R P
Sbjct: 291 SGAPGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGP-CPAAAQGARGSWP 349
Query: 250 APR---GAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRL 306
+PR GAR A T A RR PA P +EG + +
Sbjct: 350 SPRCLPSDGGAREA---------PPTSAPHPRR------PAGSPPALADREGRRSL---V 391
Query: 307 PLVSVLVRHDGPLPLSAAALGAPGLR 332
P S+ ++ L L+ G G R
Sbjct: 392 PQTSIQGQNFAQLSLARPWAGKRGHR 417
>gi|7705268 family with sequence similarity 8, member A1 [Homo
sapiens]
Length = 413
Score = 43.5 bits (101), Expect = 3e-04
Identities = 59/217 (27%), Positives = 77/217 (35%), Gaps = 40/217 (18%)
Query: 14 LCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRV 73
L G T V C + + GR APG A +K PR RG G
Sbjct: 28 LRGPPTTAVPCPRDDPQAEPQAPGRPTAPGLAAAAAADK---LEPPRELRKRGEAASGS- 83
Query: 74 ERGADHQERP------AGAPAHRPVPAAAAILRAAVHRVL--------------RVLRAA 113
GA+ QE+ A AP RP +A VH L A
Sbjct: 84 --GAELQEQAGCEAPEAAAPRERPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAY 141
Query: 114 AAVRDAERGLRREG---PRRHAPPRKQLR----------GRRGAAGLVSAGHLGREPPRG 160
+ + + + G P+ APP QL G G +AG P G
Sbjct: 142 CSPQPSPQSFPSGGAAVPQAAAPPPPQLGYYNPFYFLSPGAAGPDPRTAAGISTPAPVAG 201
Query: 161 GGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQA 197
GPR P + ATP+ G + PS R+ + +GRQA
Sbjct: 202 LGPRAPHVQASVRATPVTRVGSAAPS-RSPSETGRQA 237
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 3e-04
Identities = 60/204 (29%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPP---RGGGPRPPALV 169
R A G GP RH LRG AA +A LG PP R PR +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPR-SSLA 267
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR- 228
PL P S + R C V+ Q++ +H R PRA A A R
Sbjct: 268 RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRP 327
Query: 229 GQGRGAAAGPERPPHVQ-GRRPAP 251
G G A P P ++ G P P
Sbjct: 328 GLDPGPAPYPLTPAALRPGTSPHP 351
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 3e-04
Identities = 60/204 (29%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPP---RGGGPRPPALV 169
R A G GP RH LRG AA +A LG PP R PR +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPR-SSLA 267
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR- 228
PL P S + R C V+ Q++ +H R PRA A A R
Sbjct: 268 RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRP 327
Query: 229 GQGRGAAAGPERPPHVQ-GRRPAP 251
G G A P P ++ G P P
Sbjct: 328 GLDPGPAPYPLTPAALRPGTSPHP 351
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 43.1 bits (100), Expect = 3e-04
Identities = 65/267 (24%), Positives = 98/267 (36%), Gaps = 41/267 (15%)
Query: 24 CRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRR-PRPTCSRGRTERGRVERGADHQER 82
C+ + G RRG G ++P A +G +++ + + P PT RTE+ + ++ Q R
Sbjct: 41 CQPAGGTGQRRGSG--SSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP---QRR 95
Query: 83 PAGAPAHR--PVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRG 140
PAG R +++A + A R A A R +R+ + P
Sbjct: 96 PAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQ 155
Query: 141 RRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALL 200
RRG+ SA + PVP ++ E R + C +G
Sbjct: 156 RRGSGCSPSADQQRAQDRE----EEATAAPVPTSSGHRTEKRKRLQLQ-CQPAGGTGQRR 210
Query: 201 GAHVRPAPD--------RAARCAPRAKKAGAN-------------AGARGQGRGAAAGPE 239
G+ P+ R +R +P A + A AG GQ RG AA P
Sbjct: 211 GSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPV 270
Query: 240 RPPHVQGRR------PAPRG-AVGARR 259
G+R PAP G RR
Sbjct: 271 PTTGGTGQRRGTAAAPAPTSTGTGQRR 297
Score = 37.0 bits (84), Expect = 0.025
Identities = 52/205 (25%), Positives = 71/205 (34%), Gaps = 42/205 (20%)
Query: 112 AAAAVRDAERGLRREGPRRHAPPRKQLRG---RRGAAGLVSAGHLGREPPRGGGPRPPAL 168
AAAA RG R E + P R+ G RRG+ SA G + A
Sbjct: 71 AAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDRE----EEAAA 126
Query: 169 VPVPLATPLLLEGRS--EPSTRACAVSGRQAALLGAHVRPAPDRA--------ARCAPRA 218
P P ++ E R +P R A +G++ G+ P+ D+ A AP
Sbjct: 127 APAPTSSGHRTEKRKPQQPQCRPAAGTGQRR---GSGCSPSADQQRAQDREEEATAAPVP 183
Query: 219 KKAGAN-------------AGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAV 265
+G AG GQ RG+ + P R P G G RR +
Sbjct: 184 TSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSR---------QPAGGTGQRRGSRSSP 234
Query: 266 GKAGGLTRARETRRRGEEGVPAAGT 290
+ RE + PA GT
Sbjct: 235 SADQQRAQDREEEAAQPQRRPAGGT 259
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 3e-04
Identities = 60/204 (29%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPP---RGGGPRPPALV 169
R A G GP RH LRG AA +A LG PP R PR +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPR-SSLA 267
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR- 228
PL P S + R C V+ Q++ +H R PRA A A R
Sbjct: 268 RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRP 327
Query: 229 GQGRGAAAGPERPPHVQ-GRRPAP 251
G G A P P ++ G P P
Sbjct: 328 GLDPGPAPYPLTPAALRPGTSPHP 351
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,247,380
Number of Sequences: 37866
Number of extensions: 1003727
Number of successful extensions: 8507
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 919
Number of HSP's that attempted gapping in prelim test: 6948
Number of HSP's gapped (non-prelim): 2215
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.