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Search of human proteins with 239754342
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754342 PREDICTED: hypothetical protein [Homo sapiens] 487 e-138
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 47 1e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 47 2e-05
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 44 2e-04
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 42 5e-04
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 42 5e-04
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 42 5e-04
gi|115511036 alpha-kinase 3 [Homo sapiens] 40 0.002
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 39 0.003
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 39 0.003
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|13775236 scratch [Homo sapiens] 39 0.003
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 39 0.004
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 39 0.004
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 38 0.007
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 38 0.007
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 38 0.009
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 38 0.009
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 38 0.009
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 37 0.011
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 37 0.015
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 37 0.015
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
>gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 487 bits (1254), Expect = e-138
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MSESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARV 60
MSESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARV
Sbjct: 1 MSESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARV 60
Query: 61 RARPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEG 120
RARPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEG
Sbjct: 61 RARPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEG 120
Query: 121 VPAGGRGRGWREGGSTELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAAT 180
VPAGGRGRGWREGGSTELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAAT
Sbjct: 121 VPAGGRGRGWREGGSTELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAAT 180
Query: 181 NCKRNSLGGEAGGCGGWEGDSEGWEVNAGLDRLSLSFSADLSQPESCHFSTGIQN 235
NCKRNSLGGEAGGCGGWEGDSEGWEVNAGLDRLSLSFSADLSQPESCHFSTGIQN
Sbjct: 181 NCKRNSLGGEAGGCGGWEGDSEGWEVNAGLDRLSLSFSADLSQPESCHFSTGIQN 235
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/176 (28%), Positives = 71/176 (40%), Gaps = 14/176 (7%)
Query: 4 SCLNAQRGGRRERERDSK-ALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRA 62
S L+ + R E + D+ + +RV AR P +R R G RPRG P AR +
Sbjct: 169 SSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRP-ARGKK 227
Query: 63 RPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRV-CEREGEGSRGVGEEGV 121
RP + +A R +A ++ SSA R R C G+ GVG G
Sbjct: 228 RPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGA 287
Query: 122 PAGGRGRGWREGGSTELQPGPRFACTSRLLKPKHVP--KAVFSASGRFLHPQFPPL 175
A G G G+ ++ GP ++P +P + F LH PPL
Sbjct: 288 RAPGEGSA--GSGTERVELGPH-------VRPFFLPPTSSSFFGGPPRLHVPLPPL 334
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/176 (28%), Positives = 71/176 (40%), Gaps = 14/176 (7%)
Query: 4 SCLNAQRGGRRERERDSK-ALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRA 62
S L+ + R E + D+ + +RV AR P +R R G RPRG P AR +
Sbjct: 169 SSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRP-ARGKK 227
Query: 63 RPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRV-CEREGEGSRGVGEEGV 121
RP + +A R +A ++ SSA R R C G+ GVG G
Sbjct: 228 RPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGA 287
Query: 122 PAGGRGRGWREGGSTELQPGPRFACTSRLLKPKHVP--KAVFSASGRFLHPQFPPL 175
A G G G+ ++ GP ++P +P + F LH PPL
Sbjct: 288 RAPGEGSA--GSGTERVELGPH-------VRPFFLPPTSSSFFGGPPRLHVPLPPL 334
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 46.6 bits (109), Expect = 2e-05
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 16 RERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAA 75
R RD A + PAR SP A ++ G R GG R R R R R+ ++A
Sbjct: 344 RVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSR---SSA 400
Query: 76 VRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGS 135
P R R R A S S R R G G+ G G E P RG G +
Sbjct: 401 SAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPE--PGSERGHGGHGKRA 458
Query: 136 TELQPGPRFACTS 148
E P R A TS
Sbjct: 459 KERPPRARPASTS 471
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 43.5 bits (101), Expect = 2e-04
Identities = 57/173 (32%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 31 RSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSRGAA 90
R AR+ G AR P + RG +P R+R RPG + A+ R A Q G G A
Sbjct: 440 RGARAGETTPLGEARGPCWKARGAVPSGRLRGRPG----RVAGASGRRGASQARGGTGRA 495
Query: 91 AATSWSSACRGR---GRVCEREGEGSRGVGEEGVPAGGRGRGWRE---GGSTELQPGPRF 144
A RGR GRV GEG EG P R R E G LQ P
Sbjct: 496 PA----RLRRGRGMPGRVGNGVGEGRGASEPEGEPE-PRARADLEVLQAGFERLQSLPEL 550
Query: 145 ACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGW 197
A P V V + +G P GLA + +R +L A GGW
Sbjct: 551 AERLGGRCPGQVAHGVLARAGLLAAAARP--GLAGSGVQR-ALALAAAQLGGW 600
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 42.0 bits (97), Expect = 5e-04
Identities = 51/157 (32%), Positives = 58/157 (36%), Gaps = 20/157 (12%)
Query: 30 ARSARSPLGARAGGARVPGARPR---GGLPRARVRARPGCRAPFLCTAAVRPAARQRLGS 86
AR GA A A +P RPR PR+R P R RP+ RLG
Sbjct: 26 ARGCNGIPGAAAWEAALPRRRPRRHPSVNPRSRAAGSPRTRGR---RTEERPSG-SRLGD 81
Query: 87 RGAAAATSWSS-ACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREG-------GSTEL 138
RG A RGRGR ER G RG G A RG R G GS
Sbjct: 82 RGRGRALPGGRLGGRGRGRAPERVGGRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITT 141
Query: 139 QPGPRFACTSRLLKPKHV--PKAVFSASGRF---LHP 170
P S P H PK ++ +G F +HP
Sbjct: 142 LPALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHP 178
Score = 35.0 bits (79), Expect = 0.056
Identities = 33/102 (32%), Positives = 36/102 (35%), Gaps = 17/102 (16%)
Query: 40 RAGGARVPGARPRG------------GLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
R GG ++ G RG LPR R R P AA P R G R
Sbjct: 15 RPGGCQISGRGARGCNGIPGAAAWEAALPRRRPRRHPSVNPR--SRAAGSPRTR---GRR 69
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRG 129
+ RGRGR G RG G GGRGRG
Sbjct: 70 TEERPSGSRLGDRGRGRALPGGRLGGRGRGRAPERVGGRGRG 111
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 42.0 bits (97), Expect = 5e-04
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 8 AQRGGRRERERDSKALSR---VCAPARSARSPLGA-----RAGGARVPGARPRGGLPRAR 59
A+R G R RD++ +R + AR R+ L A R G R GA +G + RA
Sbjct: 776 AERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAA 835
Query: 60 VRARPG-CRAPFLCTAAVRP------AARQRLGSRGAAAATSWSSACRG 101
RAR G R P +A RP AAR GS G A+ +A RG
Sbjct: 836 SRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRG 884
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 42.0 bits (97), Expect = 5e-04
Identities = 39/130 (30%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
Query: 14 RERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCT 73
++++R + R +P R+AR L GG RP G P + RA PG A
Sbjct: 1305 QKKQRLGEQRERSASPQRAARPRLEEAPGGQ----GRPEAGRPASEARA-PGLAAADAAD 1359
Query: 74 AAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREG 133
AA R G + A A + S CR G G G G + A GR G
Sbjct: 1360 AA-------RAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRA-----G 1407
Query: 134 GSTELQPGPR 143
+PGPR
Sbjct: 1408 ARAGPRPGPR 1417
Score = 28.9 bits (63), Expect = 4.0
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 30 ARSARSPLGARAGGARVPGARPRGGLPRARVRARPG 65
A A GARAG PG RP GG P + PG
Sbjct: 1399 ALEAEGRAGARAGPR--PGPRPPGGAPARKAAVAPG 1432
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/116 (35%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 25 RVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRL 84
R C S LGA G A P PR RARPG + TA RP A R
Sbjct: 107 RYCRHQGRQGSGLGAGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVTTA--RPPAINRG 164
Query: 85 GSRGAAAATSWSSACRGRGRVCEREGEGSRGVGE---EGVPAGGR---GRGWREGG 134
+ A A ++A RG G R GE + G EG G R RGW GG
Sbjct: 165 ARQPRAGA---AAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGG 217
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 39.3 bits (90), Expect = 0.003
Identities = 56/206 (27%), Positives = 66/206 (32%), Gaps = 33/206 (16%)
Query: 19 DSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRP 78
DS+ P RSP G G PR ++ R RP P RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP-------RP 128
Query: 79 AARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
S AA + + GR G GSRG G + V A R R GG
Sbjct: 129 GCSSARASPAPAAPQAAARTAPGRA-ASGGSGPGSRGQGSDQVGA----RPSRAGG---- 179
Query: 139 QPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGWE 198
QP P C P+ ++ F P P R G A CG W
Sbjct: 180 QP-PPLTCRRCRAAPRR-------SARPFRRPGLPLK-------SRPGSGTGARSCGTW- 223
Query: 199 GDSEGWEVNAGLDRLSLSFSADLSQP 224
S G A S FS+D QP
Sbjct: 224 -GSGGGPGTAAASSPSADFSSDSPQP 248
Score = 31.2 bits (69), Expect = 0.81
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 2 SESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVR 61
S S L G R ++A AP +AR+ G A G PG+R +G
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 62 ARPGCRAPFL----CTAAVRPAAR----------QRLGS-RGAAAATSWSS 97
+R G + P L C AA R +AR R GS GA + +W S
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGS 225
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 39.3 bits (90), Expect = 0.003
Identities = 56/206 (27%), Positives = 66/206 (32%), Gaps = 33/206 (16%)
Query: 19 DSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRP 78
DS+ P RSP G G PR ++ R RP P RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP-------RP 128
Query: 79 AARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
S AA + + GR G GSRG G + V A R R GG
Sbjct: 129 GCSSARASPAPAAPQAAARTAPGRA-ASGGSGPGSRGQGSDQVGA----RPSRAGG---- 179
Query: 139 QPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGWE 198
QP P C P+ ++ F P P R G A CG W
Sbjct: 180 QP-PPLTCRRCRAAPRR-------SARPFRRPGLPLK-------SRPGSGTGARSCGTW- 223
Query: 199 GDSEGWEVNAGLDRLSLSFSADLSQP 224
S G A S FS+D QP
Sbjct: 224 -GSGGGPGTAAASSPSADFSSDSPQP 248
Score = 31.2 bits (69), Expect = 0.81
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 2 SESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVR 61
S S L G R ++A AP +AR+ G A G PG+R +G
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 62 ARPGCRAPFL----CTAAVRPAAR----------QRLGS-RGAAAATSWSS 97
+R G + P L C AA R +AR R GS GA + +W S
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGS 225
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 39.3 bits (90), Expect = 0.003
Identities = 56/206 (27%), Positives = 66/206 (32%), Gaps = 33/206 (16%)
Query: 19 DSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRP 78
DS+ P RSP G G PR ++ R RP P RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP-------RP 128
Query: 79 AARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
S AA + + GR G GSRG G + V A R R GG
Sbjct: 129 GCSSARASPAPAAPQAAARTAPGRA-ASGGSGPGSRGQGSDQVGA----RPSRAGG---- 179
Query: 139 QPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGWE 198
QP P C P+ ++ F P P R G A CG W
Sbjct: 180 QP-PPLTCRRCRAAPRR-------SARPFRRPGLPLK-------SRPGSGTGARSCGTW- 223
Query: 199 GDSEGWEVNAGLDRLSLSFSADLSQP 224
S G A S FS+D QP
Sbjct: 224 -GSGGGPGTAAASSPSADFSSDSPQP 248
Score = 31.2 bits (69), Expect = 0.81
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 2 SESCLNAQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVR 61
S S L G R ++A AP +AR+ G A G PG+R +G
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 62 ARPGCRAPFL----CTAAVRPAAR----------QRLGS-RGAAAATSWSS 97
+R G + P L C AA R +AR R GS GA + +W S
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGS 225
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 30 ARSARSPLG-ARAGGARVPGARPR-----GGLPRARVRARPGCRAPFLCTAAVRPAARQR 83
A + R LG A AG A P RP GG G A R +R++
Sbjct: 70 AAAVRGELGPAAAGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFITDGR--SRRK 127
Query: 84 LGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTELQPGP 142
+ G+AAA S +SA G G G R +G GGRG G R G TE + GP
Sbjct: 128 ASNAGSAAAPSTASAAAPDGDAGGGGGAGGRSLGS---GPGGRG-GTRAGAGTEARAGP 182
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 38.9 bits (89), Expect = 0.004
Identities = 55/203 (27%), Positives = 71/203 (34%), Gaps = 40/203 (19%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRA----------RVRARPGCRAPFLCTAAVR 77
AP S R L + + G P R GG+P + R++ P AP C
Sbjct: 136 APTSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTT 195
Query: 78 PAARQRLGSRGAAAATSW-----------SSACRGRG-------RVCEREGEGSRGVGEE 119
A+ G +GA + SW S + G G G GS
Sbjct: 196 SGAKAG-GGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSG 254
Query: 120 GVPAGGRGRGW---REGGS-----TELQPGPRFACTSRL-LKPKHVPKAVFSASGRFLHP 170
GV AG RG R+G S ++L PGP L L P P +A+
Sbjct: 255 GVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPG 314
Query: 171 QFPPLGL--AATNCKRNSLGGEA 191
PP+ L A KR GG A
Sbjct: 315 PAPPITLEPPAPGLKRGREGGRA 337
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/113 (36%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 33 ARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSRGAAAA 92
AR+P G +G A+ PG RG R R RPG AP P AR GAAA
Sbjct: 16 ARAPSGGGSGQAQRPGPG-RGSWRRPPRRQRPGPAAP-------SPPAR------GAAA- 60
Query: 93 TSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTELQPGPRFA 145
W + G G + G+G G GGRG GGS PG R A
Sbjct: 61 --WGRS--GGGPAAQSGGDGGGLPRRAGAEPGGRG-----GGSGGTMPGGRRA 104
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 38.9 bits (89), Expect = 0.004
Identities = 46/163 (28%), Positives = 58/163 (35%), Gaps = 29/163 (17%)
Query: 25 RVCAPAR--SARSPLGARAGGARVPG--------ARPRGGLPRA--RVRARPGCRA---- 68
++C P R+P G G R PG ARP G L +RARPGCR
Sbjct: 27 QICGPRERHGPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPH 86
Query: 69 PFLCTAAVRPAARQRLGSRGAAAATSWSS------ACRGRGRVCEREGEGSRGVGEEGVP 122
P +RP R R +W S GR G + GV P
Sbjct: 87 PAARCLPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRP 146
Query: 123 AGGRGR------GWREGGSTELQPGPRFACTSRLLKPKHVPKA 159
G GR G GG T + PG R + +P+ +A
Sbjct: 147 GGSGGRSHPGGPGSPRGGGT-VGPGDRGPAAADGGRPQRTVRA 188
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 38.1 bits (87), Expect = 0.007
Identities = 49/153 (32%), Positives = 57/153 (37%), Gaps = 32/153 (20%)
Query: 11 GGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPF 70
G RERE + A S APAR+ L ARA R G RP GLP A PG
Sbjct: 152 GKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRP--GLPVP--TAPPG----- 202
Query: 71 LCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEG-----SRGVGEEGVPAGG 125
G AAA ++C R R G+ +R V G PA G
Sbjct: 203 -----------------GLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVG 245
Query: 126 RGRGWREGGSTELQPGPRFAC-TSRLLKPKHVP 157
G G G + L F C +LLK P
Sbjct: 246 TGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRP 278
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 38.1 bits (87), Expect = 0.007
Identities = 49/153 (32%), Positives = 57/153 (37%), Gaps = 32/153 (20%)
Query: 11 GGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPF 70
G RERE + A S APAR+ L ARA R G RP GLP A PG
Sbjct: 152 GKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRP--GLPVP--TAPPG----- 202
Query: 71 LCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEG-----SRGVGEEGVPAGG 125
G AAA ++C R R G+ +R V G PA G
Sbjct: 203 -----------------GLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVG 245
Query: 126 RGRGWREGGSTELQPGPRFAC-TSRLLKPKHVP 157
G G G + L F C +LLK P
Sbjct: 246 TGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRP 278
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 38.1 bits (87), Expect = 0.007
Identities = 49/153 (32%), Positives = 57/153 (37%), Gaps = 32/153 (20%)
Query: 11 GGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPF 70
G RERE + A S APAR+ L ARA R G RP GLP A PG
Sbjct: 152 GKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRP--GLPVP--TAPPG----- 202
Query: 71 LCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEG-----SRGVGEEGVPAGG 125
G AAA ++C R R G+ +R V G PA G
Sbjct: 203 -----------------GLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVG 245
Query: 126 RGRGWREGGSTELQPGPRFAC-TSRLLKPKHVP 157
G G G + L F C +LLK P
Sbjct: 246 TGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRP 278
>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
sapiens]
Length = 321
Score = 37.7 bits (86), Expect = 0.009
Identities = 54/191 (28%), Positives = 66/191 (34%), Gaps = 29/191 (15%)
Query: 42 GGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAA-RQRLGS-----------RGA 89
GGARVP GG PRA R F C PAA R LG + A
Sbjct: 70 GGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMA 129
Query: 90 AAATSWSSACRG-----RGR-------VCEREGEGSRGVGEEGVPAGGRGRGWREGGSTE 137
A A + RG RGR V ER G+ + + G G R
Sbjct: 130 AGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFGVRSQSCDS 189
Query: 138 LQP----GPRFACTSRLL-KPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAG 192
P +A +S+L P P+ S GR++ PP G C S A
Sbjct: 190 TVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAAL 249
Query: 193 GCGGWEGDSEG 203
CG G+ G
Sbjct: 250 SCGPSWGEDSG 260
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 37.7 bits (86), Expect = 0.009
Identities = 45/137 (32%), Positives = 56/137 (40%), Gaps = 29/137 (21%)
Query: 11 GGRRERERDSKALSRVCAPARSARSPLGARAG--GARVPGARPRG----GLPRARVRARP 64
GG RER PA AR P AR G A +P + PRG L R RP
Sbjct: 63 GGARER------------PAEGARGPRAARGGARAAPMPSSAPRGPTEPALRRPSSAERP 110
Query: 65 GCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAG 124
+AP + R + GA A+ S SS G+ R R+G R ++ P
Sbjct: 111 LAQAPSSSASVGR--------APGAMASPSRSSEATGKPR--GRDGR-PRREEDDVPPEE 159
Query: 125 GRGRGWREGGSTELQPG 141
R R EGGS + Q G
Sbjct: 160 KRLRLLLEGGSAQPQDG 176
Score = 28.1 bits (61), Expect = 6.8
Identities = 36/98 (36%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 40 RAGGARV-PGARPRGGLPRARVRARPGCRAPFLCTAAVR----PAARQRLGSRGAAAATS 94
R GGAR P RG PRA AR G RA + ++A R PA R+ + A
Sbjct: 61 RGGGARERPAEGARG--PRA---ARGGARAAPMPSSAPRGPTEPALRRPSSAERPLAQAP 115
Query: 95 WSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWRE 132
SSA GR SR G P G GR RE
Sbjct: 116 SSSA--SVGRAPGAMASPSRSSEATGKPRGRDGRPRRE 151
>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
sapiens]
Length = 321
Score = 37.7 bits (86), Expect = 0.009
Identities = 54/191 (28%), Positives = 66/191 (34%), Gaps = 29/191 (15%)
Query: 42 GGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAA-RQRLGS-----------RGA 89
GGARVP GG PRA R F C PAA R LG + A
Sbjct: 70 GGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMA 129
Query: 90 AAATSWSSACRG-----RGR-------VCEREGEGSRGVGEEGVPAGGRGRGWREGGSTE 137
A A + RG RGR V ER G+ + + G G R
Sbjct: 130 AGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFGVRSQSCDS 189
Query: 138 LQP----GPRFACTSRLL-KPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAG 192
P +A +S+L P P+ S GR++ PP G C S A
Sbjct: 190 TVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAAL 249
Query: 193 GCGGWEGDSEG 203
CG G+ G
Sbjct: 250 SCGPSWGEDSG 260
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 37.4 bits (85), Expect = 0.011
Identities = 53/188 (28%), Positives = 75/188 (39%), Gaps = 24/188 (12%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
APA +A SP A A AR+ P G R + RA+ R A R +G
Sbjct: 10 APATAAASPAAA-ATEARL---HPEGS-SRKQQRAQSPARPRDSSLRQTIAATRSPVG-- 62
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTELQP-GPRFAC 146
A T +S + ++ +++ +G++ G PA RG G +T L P G
Sbjct: 63 ---AGTKLNSV--RQQQLQQQQQQGNKTGSRTGPPASIRGGGGGAEKATPLAPKGAAPGA 117
Query: 147 TSRLLKPKHVPKAVFSASG--RFLHPQFPPLGLAATNCKRNSL---------GGEAGGCG 195
+ + P A +A G R P+ PP L + K GGE GG G
Sbjct: 118 VQPVAGAEAAPAATLAALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAG 177
Query: 196 GWEGDSEG 203
G G+ EG
Sbjct: 178 GGSGEREG 185
Score = 34.7 bits (78), Expect = 0.073
Identities = 66/234 (28%), Positives = 78/234 (33%), Gaps = 66/234 (28%)
Query: 9 QRGGRRERERDSKALSRVCAPARSARSPLGA--------------------RAGGARVPG 48
QR R RDS + A RSP+GA + G P
Sbjct: 37 QRAQSPARPRDSSLRQTIAA----TRSPVGAGTKLNSVRQQQLQQQQQQGNKTGSRTGPP 92
Query: 49 ARPRGG-------LPRARVRARPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRG 101
A RGG P A A PG AV+P A G+ A AAT + R
Sbjct: 93 ASIRGGGGGAEKATPLAPKGAAPG---------AVQPVA----GAEAAPAATLAALGGRR 139
Query: 102 RGRVCE--RE--------------GEGSRGVGEEGVPAGGRGRGWREGGSTELQPGPRFA 145
G E RE GEG G GE G GG G REGG+ QP P
Sbjct: 140 PGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGE--REGGAP--QPPPPRG 195
Query: 146 CTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGWEG 199
+ ++ + + G P G RNS G AGG G G
Sbjct: 196 WRGKGVRAQQ--RGGSGGEGASPSPSSSSAGKTPGTGSRNSGSGVAGGGSGGGG 247
Score = 34.7 bits (78), Expect = 0.073
Identities = 38/131 (29%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 8 AQRGGRRERERDSKALSRVCAPARSARSP-LGARAGGARVPGARPRGGLPRARVRARP-- 64
A GGRR + P++ P LG GG G G R +P
Sbjct: 133 AALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGAPQPPP 192
Query: 65 --GCRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVP 122
G R VR R G GA+ + S SSA + G G G G G
Sbjct: 193 PRGWRGK-----GVRAQQRGGSGGEGASPSPSSSSAGKTPGTGSRNSGSGVAGGG----- 242
Query: 123 AGGRGRGWREG 133
+GG G W+EG
Sbjct: 243 SGGGGSYWKEG 253
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 37.0 bits (84), Expect = 0.015
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
AP R+AR A+ GA GAR +G A P + RPA R +G+R
Sbjct: 207 APDRAARCAPRAKKAGANA-GARGQGRGAAAGPERPPHVQGR-------RPAPRGAVGAR 258
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
A + R R R GE EGVPA G R ++ G+T++
Sbjct: 259 RALLGAVGKAGGLTRARETRRRGE-------EGVPAAGTPRCLQQEGATQV 302
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 37.0 bits (84), Expect = 0.015
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
AP R+AR A+ GA GAR +G A P + RPA R +G+R
Sbjct: 207 APDRAARCAPRAKKAGANA-GARGQGRGAAAGPERPPHVQGR-------RPAPRGAVGAR 258
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
A + R R R GE EGVPA G R ++ G+T++
Sbjct: 259 RALLGAVGKAGGLTRARETRRRGE-------EGVPAAGTPRCLQQEGATQV 302
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 37.0 bits (84), Expect = 0.015
Identities = 49/143 (34%), Positives = 56/143 (39%), Gaps = 23/143 (16%)
Query: 10 RGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGG-LPRARVRARPGCRA 68
+ G ER++ V A AR R + PG PRG LP AR R G R
Sbjct: 10 KAGNEERDQ-------VLADARPRRCCV------VEAPGPMPRGWILPGARSEER-GARL 55
Query: 69 PFLCTAAVRPAA---RQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGG 125
V P A RQ G ++ R G + E G GEEGV AGG
Sbjct: 56 AESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGRE----GEEGVRAGG 111
Query: 126 RGRG-WREGGSTELQPGPRFACT 147
G G R GGS QP R A T
Sbjct: 112 GGTGEVRGGGSPGRQPVGRAAVT 134
Score = 30.0 bits (66), Expect = 1.8
Identities = 48/180 (26%), Positives = 59/180 (32%), Gaps = 49/180 (27%)
Query: 38 GARAG--GARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAA----------RQRLG 85
GAR+ GAR+ +R RG PRA +P P + P R R G
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPA-GGPLSSEGHLLPLVQRDGGGLAEHRGREG 103
Query: 86 SRGAAAATSWSSACRG----------RGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGS 135
G A + RG R V G G+ G G + V G R EG
Sbjct: 104 EEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQ 163
Query: 136 TELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCG 195
Q GPR + V +A +A GR GG GGCG
Sbjct: 164 ---QFGPRVGLRQH---AERVERAQRAAEGRG--------------------GGGGGGCG 197
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 37.0 bits (84), Expect = 0.015
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
AP R+AR A+ GA GAR +G A P + RPA R +G+R
Sbjct: 202 APDRAARCAPRAKKAGANA-GARGQGRGAAAGPERPPHVQGR-------RPAPRGAVGAR 253
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
A + R R R GE EGVPA G R ++ G+T++
Sbjct: 254 RALLGAVGKAGGLTRARETRRRGE-------EGVPAAGTPRCLQQEGATQV 297
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 37.0 bits (84), Expect = 0.015
Identities = 49/143 (34%), Positives = 56/143 (39%), Gaps = 23/143 (16%)
Query: 10 RGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGG-LPRARVRARPGCRA 68
+ G ER++ V A AR R + PG PRG LP AR R G R
Sbjct: 10 KAGNEERDQ-------VLADARPRRCCV------VEAPGPMPRGWILPGARSEER-GARL 55
Query: 69 PFLCTAAVRPAA---RQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGG 125
V P A RQ G ++ R G + E G GEEGV AGG
Sbjct: 56 AESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGRE----GEEGVRAGG 111
Query: 126 RGRG-WREGGSTELQPGPRFACT 147
G G R GGS QP R A T
Sbjct: 112 GGTGEVRGGGSPGRQPVGRAAVT 134
Score = 30.0 bits (66), Expect = 1.8
Identities = 48/180 (26%), Positives = 59/180 (32%), Gaps = 49/180 (27%)
Query: 38 GARAG--GARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAA----------RQRLG 85
GAR+ GAR+ +R RG PRA +P P + P R R G
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPA-GGPLSSEGHLLPLVQRDGGGLAEHRGREG 103
Query: 86 SRGAAAATSWSSACRG----------RGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGS 135
G A + RG R V G G+ G G + V G R EG
Sbjct: 104 EEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQ 163
Query: 136 TELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCG 195
Q GPR + V +A +A GR GG GGCG
Sbjct: 164 ---QFGPRVGLRQH---AERVERAQRAAEGRG--------------------GGGGGGCG 197
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 37.0 bits (84), Expect = 0.015
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 28 APARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAARQRLGSR 87
AP R+AR A+ GA GAR +G A P + RPA R +G+R
Sbjct: 202 APDRAARCAPRAKKAGANA-GARGQGRGAAAGPERPPHVQGR-------RPAPRGAVGAR 253
Query: 88 GAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGSTEL 138
A + R R R GE EGVPA G R ++ G+T++
Sbjct: 254 RALLGAVGKAGGLTRARETRRRGE-------EGVPAAGTPRCLQQEGATQV 297
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 37.0 bits (84), Expect = 0.015
Identities = 49/143 (34%), Positives = 56/143 (39%), Gaps = 23/143 (16%)
Query: 10 RGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGG-LPRARVRARPGCRA 68
+ G ER++ V A AR R + PG PRG LP AR R G R
Sbjct: 10 KAGNEERDQ-------VLADARPRRCCV------VEAPGPMPRGWILPGARSEER-GARL 55
Query: 69 PFLCTAAVRPAA---RQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGG 125
V P A RQ G ++ R G + E G GEEGV AGG
Sbjct: 56 AESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGRE----GEEGVRAGG 111
Query: 126 RGRG-WREGGSTELQPGPRFACT 147
G G R GGS QP R A T
Sbjct: 112 GGTGEVRGGGSPGRQPVGRAAVT 134
Score = 30.0 bits (66), Expect = 1.8
Identities = 48/180 (26%), Positives = 59/180 (32%), Gaps = 49/180 (27%)
Query: 38 GARAG--GARVPGARPRGGLPRARVRARPGCRAPFLCTAAVRPAA----------RQRLG 85
GAR+ GAR+ +R RG PRA +P P + P R R G
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPA-GGPLSSEGHLLPLVQRDGGGLAEHRGREG 103
Query: 86 SRGAAAATSWSSACRG----------RGRVCEREGEGSRGVGEEGVPAGGRGRGWREGGS 135
G A + RG R V G G+ G G + V G R EG
Sbjct: 104 EEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQ 163
Query: 136 TELQPGPRFACTSRLLKPKHVPKAVFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCG 195
Q GPR + V +A +A GR GG GGCG
Sbjct: 164 ---QFGPRVGLRQH---AERVERAQRAAEGRG--------------------GGGGGGCG 197
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,327,338
Number of Sequences: 37866
Number of extensions: 656598
Number of successful extensions: 4030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 367
Number of HSP's that attempted gapping in prelim test: 3591
Number of HSP's gapped (non-prelim): 729
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.