LOC100293876 21948

Name: LOC100293876	Sequence: fasta or formatted (105aa)		NCBI GI: 239754295
Description: PREDICTED: similar to ribosomal protein L36a		Referenced in: Ribosomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.9 2 1 C cysteine 3.8 4 1 D aspartate 2.9 3 1 E glutamate 2.9 3 1 F phenylalanine 2.9 3 1 G glycine 6.7 7 2 H histidine 4.8 5 1 I isoleucine 5.7 6 1 K lysine 20.0 21 2 L leucine 4.8 5 1 M methionine 2.9 3 1 N asparagine 2.9 3 1 P proline 3.8 4 1 Q glutamine 9.5 10 1 R arginine 5.7 6 1 S serine 4.8 5 1 T threonine 4.8 5 1 V valine 3.8 4 1 W tryptophan 0.0 0 0 Y tyrosine 5.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to ribosomal protein L36a LOC100290073 1.000 PREDICTED: hypothetical protein XP_002346832 RPL36A 0.739 ribosomal protein L36a RPL36AL 0.734 ribosomal protein L36a-like protein LOC100293166 0.342 PREDICTED: similar to ribosomal protein L36a LOC100290185 0.342 PREDICTED: hypothetical protein XP_002346982 LOC100288541 0.342 PREDICTED: hypothetical protein XP_002342844 LOC100288541 0.342 PREDICTED: similar to ribosomal protein L36a C2orf78 0.035 hypothetical protein LOC388960 NUP54 0.015 nucleoporin 54kDa CCDC88B 0.005 coiled-coil domain containing 88 TANC1 0.005 tetratricopeptide repeat, ankyrin repeat and coiled... TANC1 0.005 tetratricopeptide repeat, ankyrin repeat and coiled... EIF3CL 0.005 eukaryotic translation initiation factor 3, subunit... NCKIPSD 0.005 NCK interacting protein with SH3 domain isoform 1 [Ho... NCKIPSD 0.005 NCK interacting protein with SH3 domain isoform 2 [H... ZNF397OS 0.005 zinc finger protein 397 opposite strand CDC14B 0.005 CDC14 homolog B isoform 3 CDC14B 0.005 CDC14 homolog B isoform 1 CDC14B 0.005 CDC14 homolog B isoform 2 EIF3C 0.005 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.005 eukaryotic translation initiation factor 3, subunit C... NUP188 0.005 nucleoporin 188kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.