Guide to the Human Genome
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Name: ANKDD1B Sequence: fasta or formatted (524aa) NCBI GI: 239754056
Description:

PREDICTED: ankyrin repeat and death domain containing 1B

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [607aa] PREDICTED: ankyrin repeat and death domain containing 1B
alt mRNA [524aa] PREDICTED: ankyrin repeat and death domain containing 1B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         57           5
 C cysteine            0.4          2           1
 D aspartate           4.8         25           2
 E glutamate           6.3         33           2
 F phenylalanine       2.3         12           1
 G glycine             5.9         31           2
 H histidine           5.3         28           2
 I isoleucine          4.2         22           1
 K lysine              5.7         30           2
 L leucine            13.4         70           3
 M methionine          1.9         10           1
 N asparagine          5.9         31           2
 P proline             2.3         12           1
 Q glutamine           4.6         24           2
 R arginine            5.5         29           1
 S serine              6.7         35           2
 T threonine           5.0         26           1
 V valine              6.1         32           2
 W tryptophan          2.1         11           1
 Y tyrosine            0.8          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat and death domain containi... 
ANKDD1B               1.000   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1B               1.000   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1A               0.273   ankyrin repeat and death domain containing 1A 
ANK2                  0.127   ankyrin 2 isoform 3 
ANK2                  0.127   ankyrin 2 isoform 2 
ANK2                  0.127   ankyrin 2 isoform 1 
ANK1                  0.121   ankyrin 1 isoform 9 
ANK1                  0.121   ankyrin 1 isoform 1 
ANK1                  0.121   ankyrin 1 isoform 3 
ANK1                  0.121   ankyrin 1 isoform 2 
ANK1                  0.121   ankyrin 1 isoform 4 
ANK3                  0.118   ankyrin 3 isoform 1 
ANKRD28               0.117   ankyrin repeat domain 28 
ANKRD52               0.111   ankyrin repeat domain 52 
ANKRD44               0.108   ankyrin repeat domain 44 
ANKRD50               0.107   ankyrin repeat domain 50 
KIDINS220             0.104   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.098   ankyrin repeat domain 3 
ANKK1                 0.093   ankyrin repeat and kinase domain containing 1 
DAPK1                 0.091   death-associated protein kinase 1 
ANKRD17               0.087   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.087   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.082   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.082   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.080   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.080   ankyrin repeat and KH domain containing 1 isoform 2 ...
TRPA1                 0.079   ankyrin-like protein 1 
TNKS2                 0.077   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
LOC441869             0.076   hypothetical protein LOC441869 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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