Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239753786
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo ... 434 e-122
gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo ... 434 e-122
gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo ... 434 e-122
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 59 4e-09
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 53 2e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 53 2e-07
gi|157266334 tubby like protein 1 [Homo sapiens] 52 3e-07
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 50 1e-06
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 48 5e-06
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 48 5e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 48 5e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 47 9e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 47 9e-06
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 47 9e-06
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 47 9e-06
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 46 2e-05
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 46 2e-05
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 46 3e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 45 4e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 45 4e-05
gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 45 4e-05
gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens] 45 4e-05
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 45 6e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 8e-05
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 44 1e-04
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 44 1e-04
gi|157785645 SPEG complex locus [Homo sapiens] 44 1e-04
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 44 1e-04
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 44 1e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 1e-04
>gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 434 bits (1115), Expect = e-122
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA
Sbjct: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
Query: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ
Sbjct: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR
Sbjct: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
Query: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
TTHLLGVFRVLKTQERKRLEEEVKMSQKVE
Sbjct: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
>gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 434 bits (1115), Expect = e-122
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA
Sbjct: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
Query: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ
Sbjct: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR
Sbjct: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
Query: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
TTHLLGVFRVLKTQERKRLEEEVKMSQKVE
Sbjct: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
>gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 434 bits (1115), Expect = e-122
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA
Sbjct: 1 MPGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
Query: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ
Sbjct: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR
Sbjct: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
Query: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
TTHLLGVFRVLKTQERKRLEEEVKMSQKVE
Sbjct: 181 TTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 58.5 bits (140), Expect = 4e-09
Identities = 50/171 (29%), Positives = 60/171 (35%), Gaps = 7/171 (4%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
S RR R + +R P T +S S P R R P R R S PT+
Sbjct: 545 SRNTQRRGRSRSARRGRSHSRSPATRGRS--RSRTPARRGRSRSRTPAR-RRSRSRTPTR 601
Query: 71 SMREPRTPAQSTRE-SWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
RTPA+ R S P +R S SP R S R T RR R
Sbjct: 602 RRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARR---SGRSRSRTPARRGRS 658
Query: 130 SPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
R P R S PA+ + R T A R+ P R R + R
Sbjct: 659 RSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVR 709
Score = 56.6 bits (135), Expect = 1e-08
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 37/199 (18%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQ--STRESWKPTHRARESPGNPRRARESPGNQ 67
E P R AR + P T+ RTP + S+R S + T +AR S RR+R + +
Sbjct: 1660 EHPPKSRTARRGSRSSPEPKTKS-RTPPRRRSSRSSPELTRKARLS----RRSRSASSSP 1714
Query: 68 PTQSMREPR----------TPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTR 117
T+S PR PA+ +R S + A R T +RG S SP R Q +R
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSR 1774
Query: 118 ------------------ESQETDLRRARQSPRN--PRRARGSPGNRPAQSTREPRKPTN 157
SQ T RR R R+ RR RG G R+ T+
Sbjct: 1775 SRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTS 1834
Query: 158 AEHARAPETDPHEARGSHR 176
+ R P +R R
Sbjct: 1835 SRRRRGRSRTPPTSRKRSR 1853
Score = 55.8 bits (133), Expect = 3e-08
Identities = 46/174 (26%), Positives = 62/174 (35%), Gaps = 8/174 (4%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R R P R S P + RTP + S P R R P R R S
Sbjct: 570 RGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR-RRSRTR 628
Query: 67 QPTQSMREPRTPAQSTRESWKPTHAEQARA----PETDQRGASESPGNRPTQSTRESQET 122
P + R+PA+ + S T A + R+ P R S +P R S R T
Sbjct: 629 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARR---SGRSRSRT 685
Query: 123 DLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHR 176
RR R R PRR R + + R P + + +++R S R
Sbjct: 686 PARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQR 739
Score = 50.4 bits (119), Expect = 1e-06
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
P + ++R S PRR+R G+ P + P + P +A PRR+R
Sbjct: 1583 PEVDSKSRLS---PRRSRS--GSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSR 1637
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE 121
++ R P S+ ES P H ++R T +RG+ S P T+
Sbjct: 1638 SGSSSKG----RGPSPEGSSSTES-SPEHPPKSR---TARRGSRSS----PEPKTKSRTP 1685
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHE 170
R +R SP R+AR S +R A S+ E R T H R+P E
Sbjct: 1686 PRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPE 1734
Score = 46.6 bits (109), Expect = 2e-05
Identities = 60/227 (26%), Positives = 80/227 (35%), Gaps = 37/227 (16%)
Query: 6 HRARESPGNPRRARESPGNQPTQSTREPRTPAQSTR---ESWKPT------HRARESPGN 56
HR S +P A +S ++ +S PRT S R S KP R+R
Sbjct: 1724 HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Query: 57 PRRARESPGNQPTQSMREPRTPAQS--TRE--------SWKPTHAEQARAPETDQRGASE 106
R R+ G+ + S R R+ ++S TR S P E +R +RG S
Sbjct: 1784 TTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843
Query: 107 SPGNRPTQSTRESQETD-----LRRARQSPRNPRRARG---------SPGNRPAQSTREP 152
+P PT R T R+R SP RR+R S S R
Sbjct: 1844 TP---PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRS 1900
Query: 153 RKPTNAEHARA-PETDPHEARGSHRFIPRTTHLLGVFRVLKTQERKR 198
R T+ R+ P R S P T R T+ R R
Sbjct: 1901 RSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
Score = 46.2 bits (108), Expect = 2e-05
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 11 SPGNPRRAR-ESPGNQP-TQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
SP + RR ++P ++P T ST+ P +P +T++ P + R SP +
Sbjct: 297 SPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPER 356
Query: 69 TQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRAR 128
+ + EP P E + A P S+ P N P++++ R R
Sbjct: 357 SSTGPEPPAPTPLLAERHGGSPQPLATTP------LSQEPVNPPSEASPT-------RDR 403
Query: 129 QSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFI 178
P++P + S + + + +P K + + P A GSHR I
Sbjct: 404 SPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREI 453
Score = 46.2 bits (108), Expect = 2e-05
Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 11/185 (5%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPA--QSTRESWKPTHRARESPGNPRR 59
P + R+R SP RR+R + +R +P + +R T R S +P
Sbjct: 1860 PWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVS 1919
Query: 60 ARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPG-NRPTQSTRE 118
R S P + R R+ +TR + P T +R S +P R +R
Sbjct: 1920 RRRSRSRTPPVTRRRSRSRTPTTRR-----RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Query: 119 SQETDLR-RARQSP--RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSH 175
S T R R+R SP R R+R SP R +R +R P +R
Sbjct: 1975 SPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRT 2034
Query: 176 RFIPR 180
+PR
Sbjct: 2035 PLLPR 2039
Score = 44.3 bits (103), Expect = 8e-05
Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 43/195 (22%)
Query: 12 PGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRR---ARESPG--- 65
P P R R S + P PRTP++ +R P R+ G P R + SPG
Sbjct: 1411 PRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSP--GLRDGSGTPSRHSLSGSSPGMKD 1468
Query: 66 --NQPTQSMRE----------PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGN--- 110
P++ E P+TP +R P + P+ ++ G+ S
Sbjct: 1469 IPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTV 1528
Query: 111 -------------------RPTQSTRESQETDLR-RARQSPRNPRRARGSPGNRPAQSTR 150
+P+ S +E E+D ++ R P R R G+ P ++
Sbjct: 1529 ARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSK 1588
Query: 151 EPRKPTNAEHARAPE 165
P + +PE
Sbjct: 1589 SRLSPRRSRSGSSPE 1603
Score = 43.1 bits (100), Expect = 2e-04
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 6/160 (3%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R R PRR R + + RTP + R S + R +S + RR+R +
Sbjct: 689 RGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR-SGSSSERKNKSRTSQRRSRSNSSP 747
Query: 67 QPTQSMREPRTPAQSTRESWKPTHAEQARAP-ETDQRGASESPGNRPTQSTRESQETDLR 125
+ M++ R ++ +R P ++R G+S P + R S+ +
Sbjct: 748 E----MKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQ 803
Query: 126 RARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
+S PRR+R S P Q ++ P + +++ + P+
Sbjct: 804 PKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPK 843
Score = 41.6 bits (96), Expect = 5e-04
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 7 RARESPGNPRRARES-------PGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRR 59
R R P +P + +S P QPT+ +R A S+ ES KP +PG+ R
Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRH----ASSSPESPKPA----PAPGSHRE 452
Query: 60 ARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASES--PGNRPTQSTR 117
SP ++ R R + S S + ++R+P T +RG S S P R +R
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRR---MGRSRSPATAKRGRSRSRTPTKRGHSRSR 509
Query: 118 ESQETDLRRARQ-----SPRNPRRARGS--PGNRPAQSTREPRKPTNAE----HARAPET 166
Q R A++ SP+ R+R PG +++T+ + +A H+R+P T
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPAT 569
Score = 41.2 bits (95), Expect = 6e-04
Identities = 44/196 (22%), Positives = 66/196 (33%), Gaps = 29/196 (14%)
Query: 9 RESPGNPRRARESPGNQPTQSTRE-PRTPAQSTRESWK--PTHRARESPGNPRRARESPG 65
R P R S P + R RTPA+ + S P R R PRR R
Sbjct: 646 RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSR 705
Query: 66 NQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ----- 120
+ + RTP + R ++R + R S + S+R S+
Sbjct: 706 SLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSP 765
Query: 121 ------ETDLRRA---------RQSPRNPRRARGSPGNRPAQSTREPRK------PTNAE 159
LRR+ ++S PRR+R A+S PR+ P +
Sbjct: 766 RSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQ 825
Query: 160 HARAPETDPHEARGSH 175
++ P H + H
Sbjct: 826 KSKTPSRQSHSSSSPH 841
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 21/163 (12%)
Query: 7 RARESPGNPR-RARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPG 65
R+R S R R+R SP ++ +R P + +R S PT R R R+R P
Sbjct: 1901 RSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSR-SRTPTTRRRS------RSRTPP- 1952
Query: 66 NQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASE-SPGNRPTQSTRESQETDL 124
T+ RTP + R S T +P T +R S SP R +R S T
Sbjct: 1953 --VTRRRSRSRTPPVTRRRSRSRT------SPITRRRSRSRTSPVTRRRSRSRTSPVTRR 2004
Query: 125 R-RARQSP--RNPRRARGSPGNRPAQSTREPRKPTNAEHARAP 164
R R+R SP R R+R P R +R P P +R+P
Sbjct: 2005 RSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSP 2047
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/153 (24%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 7 RARESPGNPRRARESPGNQPTQSTRE---PRTPAQSTRESWKPTHRARESPGNPRRARES 63
R R G R+ + T S R RTP S + S R +P R+R S
Sbjct: 1813 RRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS---RSRTSPAPWKRSRSRAS 1869
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETD 123
P R P + +R P ++R+ + R S S + ++ S+
Sbjct: 1870 PATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPP 1929
Query: 124 LRRARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
+ R R R P R S P + R R T
Sbjct: 1930 VTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRT 1962
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 35/186 (18%)
Query: 16 RRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ----- 70
RRARE+ QP +P + + + S PT + ++ R R S + P +
Sbjct: 155 RRAREA--KQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKS 212
Query: 71 ------------SMREPRTPAQSTRESWK-------------PTHAEQARAPETDQRGAS 105
R+ R+P ++ K P R+ D +S
Sbjct: 213 SKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSS 272
Query: 106 ESPGNRPTQSTRESQETDLRRARQSPRNPRRARG-SPGNRPAQSTREPRKPTNAEHARAP 164
++ +R + ++ T L SP + RR G +P + P T ++P++ E A
Sbjct: 273 DTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEP--GTTSTQRPSSPETATKQ 330
Query: 165 ETDPHE 170
+ P+E
Sbjct: 331 PSSPYE 336
Score = 38.5 bits (88), Expect = 0.004
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
S + + S + + S+ + + S+ KP +A P +P++ PG + ++
Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKP--PPGERRSR 2676
Query: 71 SMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQS 130
S PR P S R+S +++ R + Q + + + +R Q D R S
Sbjct: 2677 S---PRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSR----S 2729
Query: 131 PRNPRRARGSPGNRPA--QSTREP 152
P + RR R +P RP +S+R P
Sbjct: 2730 PSHKRR-RETPSPRPMRHRSSRSP 2752
Score = 37.7 bits (86), Expect = 0.007
Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
+P RE +PT + R+ R+ + S+ S + + S + + S + +
Sbjct: 2583 TPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Query: 71 SMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE---TDLRRA 127
S P A + P ++R S SP +P S R+S+ + + R
Sbjct: 2643 SSSSSSPSPAKPGPQALPKPASPKKPPPGERR--SRSP-RKPIDSLRDSRSLSYSPVERR 2699
Query: 128 RQSPR-NPRRARGSPGNRPAQSTR--EPRKPTNAEHARAPETDPHEARGS 174
R SP+ +PR + S R ++ + + R P++ P P R S
Sbjct: 2700 RPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSS 2749
Score = 35.8 bits (81), Expect = 0.027
Identities = 40/163 (24%), Positives = 54/163 (33%), Gaps = 18/163 (11%)
Query: 17 RARESPG---NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMR 73
R+ + PG ++ TQ R+ + S P R R P R S P +
Sbjct: 535 RSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRS 594
Query: 74 EPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRN 133
RTP + S R P R S +P R +S S R+R R
Sbjct: 595 RSRTPTRRRSRS---------RTPARRGRSRSRTPARR--RSRTRSPVRRRSRSRSPARR 643
Query: 134 PRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHR 176
R+R R +S R T A R+ P G R
Sbjct: 644 SGRSRSRTPARRGRS----RSRTPARRGRSRSRTPARRSGRSR 682
Score = 34.7 bits (78), Expect = 0.060
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 12 PGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARES-PGNPRRARE---SPGNQ 67
P RR+ S + + S+ + + S+ + S P P A + SP
Sbjct: 2526 PAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA 2585
Query: 68 PTQSMREPR----TPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETD 123
P +++RE R TPA+ R S + + + + + +S S + + S+ S +
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2645
Query: 124 LR---------RARQSPRNPRRARGSPGNRPAQSTREPRKPTNA-EHARAPETDPHEAR 172
+A P +P++ PG R +R PRKP ++ +R+ P E R
Sbjct: 2646 SSSPSPAKPGPQALPKPASPKKP--PPGER---RSRSPRKPIDSLRDSRSLSYSPVERR 2699
Score = 34.3 bits (77), Expect = 0.079
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 36 PAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPT-HAEQA 94
P + RE+ +P A E P RES S R P TP Q ++ K ++
Sbjct: 153 PQRRAREAKQP---APEPPKPYSLVRES------SSSRSP-TPKQKKKKKKKDRGRRSES 202
Query: 95 RAPETDQRGASESPGNR-PTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPR 153
+P +++ +S+ +R ++S + + ++++ ++ +R R S PA +R
Sbjct: 203 SSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKR-SRSTTPAPKSRRAH 261
Query: 154 KPTNAEHARAPETDPHEARGS 174
+ T+A+ A + +T +R +
Sbjct: 262 RSTSADSASSSDTSRSRSRSA 282
Score = 33.5 bits (75), Expect = 0.13
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 15/183 (8%)
Query: 3 GEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARE 62
G +S PRR+R S P Q + +TP++ + S P H +S PR+
Sbjct: 800 GSSQPKAKSRTPPRRSRSSSSPPPKQKS---KTPSRQSHSSSSP-HPKVKSGTPPRQGSI 855
Query: 63 SPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQET 122
+ QS+ TP + + P ++R P S P + + R+S
Sbjct: 856 TSPQANEQSV----TPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSR 911
Query: 123 DLRRARQSPRNPRRARGSPGNR--PAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
SP+ +A SP R S+ P + T+ R + + R +PR
Sbjct: 912 S-----SSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPR 966
Query: 181 TTH 183
+H
Sbjct: 967 YSH 969
Score = 32.3 bits (72), Expect = 0.30
Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 19/172 (11%)
Query: 1 MPGEEHRARESPGNPRRARE----SPGNQPTQSTREPRTPAQSTRE-SWKPTHRARESPG 55
+ G ++ P P R R SP + T PR+ + S+ E + K RE G
Sbjct: 1459 LSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSG 1518
Query: 56 N------------PRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAP--ETDQ 101
+ P R G+ ++ +P + + P + R P + +
Sbjct: 1519 SESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSR 1578
Query: 102 RGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPR 153
G+S ++ S R S+ + PR RA+ + P PR
Sbjct: 1579 SGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPR 1630
Score = 31.6 bits (70), Expect = 0.51
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 7 RARESPGNPRRARES--PGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
R+R SP RR+R P + +R P P + +R R R PR AR
Sbjct: 2007 RSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTAR--- 2063
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
G + R+P R S + ++++R+ T + S P + S+ +
Sbjct: 2064 GKRSL-----TRSPPAIRRRSASGSSSDRSRS-ATPPATRNHSGSRTPPVALNSSRMSCF 2117
Query: 125 RRARQSPRNPRRARGSPGNRPAQSTREP 152
R SP R R P S+R P
Sbjct: 2118 SRPSMSPTPLDRCRSPGMLEPLGSSRTP 2145
Score = 28.9 bits (63), Expect = 3.3
Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 18/168 (10%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R+R P P ++R + P+ S+R + P+QS A++ P +P + S +
Sbjct: 2406 RSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPP------AQDQPRSPVPSAFSDQS 2459
Query: 67 Q-------PTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
+ P + + A +T S H P G S P ST
Sbjct: 2460 RCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAP---GVPHSDVGEPPASTGAQ 2516
Query: 120 QETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD 167
Q + L A P RR+ S + + S+ +++ + + +D
Sbjct: 2517 QPSAL--AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD 2562
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 53.1 bits (126), Expect = 2e-07
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 4/164 (2%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
E R RE N ++ RE + + R+ +T Q RE + + RE + R R++
Sbjct: 112 ERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQT 171
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETD 123
N+ Q RE Q RE + E +RG T ++TD
Sbjct: 172 ERNR--QKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTD 229
Query: 124 LRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD 167
R RQ R R R R S RE + E R + D
Sbjct: 230 RERDRQ--RKTEREREKQAERERASERETERDKERERERDRDRD 271
Score = 48.9 bits (115), Expect = 3e-06
Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 14/187 (7%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
+ R RE + +R R + + RE +T + R+ K +R +E R E
Sbjct: 78 KRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGER 137
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQET- 122
++ T RE + +E + T E+ R E +++ E NR + RE Q
Sbjct: 138 GRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREK 197
Query: 123 -------------DLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPH 169
+ R R++ R R + R Q E + AE RA E +
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETE 257
Query: 170 EARGSHR 176
+ R
Sbjct: 258 RDKERER 264
Score = 42.7 bits (99), Expect = 2e-04
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 34/225 (15%)
Query: 8 ARESPGN---PRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
+R PG+ PRR ++ R + + RE+ R RE
Sbjct: 27 SRRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKD 86
Query: 65 GN----------QPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGA----SESPGN 110
+ + + RE +T + R+ K + ++ R ET++ G ++ G
Sbjct: 87 RHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQ 146
Query: 111 RPTQSTRESQ-----ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
R + R+++ +TD R RQ+ RN ++ R NR Q RE + E+
Sbjct: 147 RERERQRDAEKERERQTDRERQRQTERNRQKEREREKNR--QERRERERQREKEN---KT 201
Query: 166 TDPHEARGSHRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
D H RG R R T +T+ +++ + E +K E
Sbjct: 202 EDRHSERGRERERERETE-------TETERKRQTDRERDRQRKTE 239
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/146 (25%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 7 RARESPGNPRRARESPGNQPTQSTRE-PRTPAQSTRESWKPTHRARESPGNPRRARESPG 65
R RE RA E + + RE R + R+ + R+ R RE+
Sbjct: 240 REREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETER 299
Query: 66 NQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLR 125
+ Q RE RE + E+ R ET++ E R Q T +E + +
Sbjct: 300 KRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQ-TEMDRERNRQ 358
Query: 126 RARQSPRNPRRARGSPGNRPAQSTRE 151
R+ R R R R QS RE
Sbjct: 359 TGREGRRQAERERERERERDRQSARE 384
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 14/155 (9%)
Query: 9 RESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
RE R RE + QS RE R + R+ + R R++ + RE+ +
Sbjct: 361 REGRRQAERERERERERDRQSARE-REERERDRDRDRQKERERQTEKDRDGQRETEKQRE 419
Query: 69 TQSMREPRTPAQSTRESWKPTHAEQARAPETD-----QRGASESPGNRPTQSTRE----- 118
+ RE + RE K E+ R +TD QR S N P ++ R
Sbjct: 420 REKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQS 479
Query: 119 --SQETDLRRARQSPRNPRRARGS-PGNRPAQSTR 150
++ T R + SP +P+ A P RPA+++R
Sbjct: 480 DPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASR 514
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 53.1 bits (126), Expect = 2e-07
Identities = 64/237 (27%), Positives = 86/237 (36%), Gaps = 51/237 (21%)
Query: 20 ESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPR-RARESPGNQPTQSMREPRTP 78
E P ++ R S S P+ R R+ +PR R R SP PT+ R P +P
Sbjct: 505 ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSP-SP 563
Query: 79 AQSTRESWKPTHAEQARAPETDQRGASE-------------SPGNRPTQSTRESQETDLR 125
A R PT + R P R S SP P + T R
Sbjct: 564 APPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKR 623
Query: 126 RARQSPRNPRRARGSP-----------------------GNRPAQSTREPRKP-TNAEHA 161
RA SP RR SP G+ P++STRE R P N H+
Sbjct: 624 RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHS 683
Query: 162 -----RAPETD---PHEARGSHRFIPR----TTHLLGVFRVLKTQERKRLEEEVKMS 206
RAP+T P RG+ R + + RV +T E K++++ S
Sbjct: 684 PSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPS 740
Score = 51.6 bits (122), Expect = 5e-07
Identities = 57/222 (25%), Positives = 83/222 (37%), Gaps = 61/222 (27%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRT---PAQSTRESWKPTHRARESPGNPR 58
P R R +P P R R +P P + + PR P Q P R SP P
Sbjct: 563 PAPPPRRRRTPTPPPR-RRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 621
Query: 59 RARESP-----------------------------------GNQPTQSMREPRTPAQSTR 83
+ R SP G+ P++S RE R+P + R
Sbjct: 622 KRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR 681
Query: 84 ESWKPTHAEQARAPETD------QRGASESPGNR--PTQSTRESQETD--------LRRA 127
S P + RAP+T +RGAS SP R P+ STR + + A
Sbjct: 682 HSPSP----RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAA 737
Query: 128 RQSPRNPRRARG--SPGNRPAQSTREPRKPTNAEHARAPETD 167
SP++ RR S P + ++P P + +++P T+
Sbjct: 738 SPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTN 779
Score = 50.1 bits (118), Expect = 1e-06
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 7 RARESPGNPRRA-----RESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
+ R SP RR+ + G+ P++STRE R+P + R S P RA ++ +P R
Sbjct: 642 KQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVR 701
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGN-RPTQSTRESQ 120
+ P + ++P+ STR + + + P+ ++ AS SP + R S+R
Sbjct: 702 RGASSSP----QRRQSPSPSTRPIRRVSRTPE---PKKIKKAASPSPQSVRRVSSSRSVS 754
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTR-EPRKPTNAEHARAPETDPHEARGS 174
+ A++ P P SP + ST P P + A++P P R S
Sbjct: 755 GSPEPAAKKPPAPP-----SPVQSQSPSTNWSPAVP--VKKAKSPTPSPSPPRNS 802
Score = 49.7 bits (117), Expect = 2e-06
Identities = 54/203 (26%), Positives = 68/203 (33%), Gaps = 31/203 (15%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPT-HRA---RESPG-- 55
P HR P + R SP Q + TR+ R R S K T H+ RESP
Sbjct: 395 PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPA 454
Query: 56 -NPRRA---------------------RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQ 93
PR+ R Q QS + + + S E K +H +
Sbjct: 455 PKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKN 514
Query: 94 ARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPR 153
+ S S P + +E+ RR SP P R R SP PA R R
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSP-PPTRRRRSPS--PAPPPRRRR 571
Query: 154 KPTNAEHARAPETDPHEARGSHR 176
PT R P P S R
Sbjct: 572 TPTPPPRRRTPSPPPRRRSPSPR 594
Score = 44.3 bits (103), Expect = 8e-05
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 21/172 (12%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTH-------RARESPGNPRRARE 62
+ P + +++ + T+ R+ ++S S P+H R+R +PRR R
Sbjct: 257 KEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRR-RP 315
Query: 63 SPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQET 122
SP +P+ R P R P ++R+P +R +S S + S+
Sbjct: 316 SPRRRPSPRRRTP------PRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS---- 365
Query: 123 DLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGS 174
R+R P+ P + SP + + + P P T P + R S
Sbjct: 366 ---RSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS 414
Score = 44.3 bits (103), Expect = 8e-05
Identities = 44/177 (24%), Positives = 63/177 (35%), Gaps = 20/177 (11%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREP---RTPAQSTRESWKPTHRARESPGN-- 56
P HR+R +PRR R SP +P+ R P P R S P R R S +
Sbjct: 298 PRRRHRSRSRSYSPRR-RPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLS 356
Query: 57 -------PRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPG 109
R+R P P ++ PR + + + P + P T SP
Sbjct: 357 GSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT 416
Query: 110 NRPTQSTRESQETDLRRARQSP-RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
+ + TR+S R SP R + G +S KP E + + E
Sbjct: 417 PQQSNRTRKS------RVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEE 467
Score = 42.0 bits (97), Expect = 4e-04
Identities = 46/186 (24%), Positives = 68/186 (36%), Gaps = 28/186 (15%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRE---SWKPTHRARE---SPGNP 57
E+ +RE R R P S R +P + R+ S P HR + SP
Sbjct: 158 EKESSREKRERSRSPRRRKSRSP--SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPE 215
Query: 58 RRARESPGNQPTQSMREPRTP-AQSTRESWK-----PTHAEQARAPETDQRGASESPGNR 111
++ + +P+ ++EP A ST + K P + +PE + + E R
Sbjct: 216 KKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTR 275
Query: 112 PTQSTRESQETDLRRARQSPRNPR------------RARGSPGNRPAQSTREP--RKPTN 157
P +R + R S PR R R SP RP+ R P R P
Sbjct: 276 PRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP 335
Query: 158 AEHARA 163
H R+
Sbjct: 336 PRHRRS 341
Score = 35.8 bits (81), Expect = 0.027
Identities = 43/189 (22%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
E+ + + + + R Q QS+ + + + S E K +H G RR S
Sbjct: 467 EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETD 123
P+ R+ T + R R+P SP P R +
Sbjct: 527 RSASPSPRKRQKETSPRGRRR----------RSPSPPPTRRRRSPSPAPPPRRRRTPTPP 576
Query: 124 LRRARQSPRNPRRA------------RGSPGNRPAQSTREPRKPTNAEHARAPETDPHEA 171
RR SP RR+ R SP P + T P P RA + P +
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK---RRASPSPPPKR 633
Query: 172 RGSHRFIPR 180
R SH P+
Sbjct: 634 RVSHSPPPK 642
Score = 27.3 bits (59), Expect = 9.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 114 QSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHE 170
+S+RE +E R+ R+P R S R + R P + +R+P P +
Sbjct: 160 ESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEK 216
Score = 27.3 bits (59), Expect = 9.6
Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 37/159 (23%)
Query: 8 ARESPGNPRRARESPGNQP----TQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
+R G+P A + P P +QS +PA +++ PT SP PR + +
Sbjct: 750 SRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPT----PSPSPPRNSDQE 805
Query: 64 PGNQPTQSMREPR---------------------------TPAQSTRESWKPTHAEQARA 96
G + + ++ + TPA + E A
Sbjct: 806 GGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAA 865
Query: 97 PETDQRGASESPGNRP--TQSTRESQETDLRRARQSPRN 133
PE + SE+ N + RE +R+A+ SP++
Sbjct: 866 PEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPQS 904
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 52.4 bits (124), Expect = 3e-07
Identities = 54/201 (26%), Positives = 74/201 (36%), Gaps = 42/201 (20%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPR--RARESPGNQP 68
SP PRR ++ P P Q R+ RT A ES PT PG R R RE P P
Sbjct: 24 SPEAPRRPKQRPA--PAQRLRKKRTEAP---ESPCPTGSKPRKPGAGRTGRPREEPSPDP 78
Query: 69 TQS----------MREPRTPAQSTRESWKPTHA-------EQARAPETDQRGASESPGNR 111
Q+ +R+P + RE++ A E+ E D+ +E +
Sbjct: 79 AQARAPQTVYARFLRDPEAKKRDPRETFLVARAPDAEDEEEEEEEDEEDEEEEAEEKKEK 138
Query: 112 ----PTQSTRESQETDLRRARQSPRNPRRARGSPGNRP--------------AQSTREPR 153
P + RE DL+ R + PR GSP P R+ +
Sbjct: 139 ILLPPKKPLREKSSADLKERRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTK 198
Query: 154 KPTNAEHARAPETDPHEARGS 174
K + E + P P AR S
Sbjct: 199 KKGSGEADKDPSGSPASARKS 219
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 50.1 bits (118), Expect = 1e-06
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 14 NPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMR 73
+P +AR+ ++S + R +Q S + HR SP R+ R+S + + R
Sbjct: 466 SPNKARD---RSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHR 522
Query: 74 EPRTPAQSTRESWKPTHAEQARAPETDQ-RGASESPGNRPT--QSTRESQETDLRRARQS 130
R+P+ K Q+R+P ++ R S SP QS S+E D RR R S
Sbjct: 523 RSRSPS-------KERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWR-S 574
Query: 131 P---RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEAR 172
P R R++R S R +R P K + RA + +R
Sbjct: 575 PSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSR 619
Score = 47.4 bits (111), Expect = 9e-06
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
+HR SP R+ R+S + + R R+P++ + R SP R +S
Sbjct: 496 DHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQ------RRQSRSPNKERDRSQSR 549
Query: 65 GNQPTQSMREPRTPA-QSTRESWKPTHAEQAR-----APETDQRGASESPG-----NRPT 113
+ R+ R+P+ + R W+ E+ R + E S SP +RP
Sbjct: 550 SPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPR 609
Query: 114 QSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKP 155
S++E + R + + + S + P+QST PR P
Sbjct: 610 ASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQST-VPRSP 650
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 17/174 (9%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
+ R G+P + R+ ++ R+ R S++E HR SP R+ R+S
Sbjct: 481 KERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKER---DHRRSRSPSKERQRRQSR 537
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQ---RGASESPGNRPTQSTRESQE 121
+ + R+P++ Q+R+P ++ R S S QS S+E
Sbjct: 538 SPNKERDRSQSRSPSEEREH-------RQSRSPSKERDRRRWRSPSKERERRQSRSSSEE 590
Query: 122 TDLRRARQSPRNP--RRARGSPGNRPAQSTREPRKPTNAEHAR--APETDPHEA 171
D R+R + R R S + +R P K N +R + E+DP ++
Sbjct: 591 RDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQS 644
Score = 42.0 bits (97), Expect = 4e-04
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 19 RESPGNQPTQSTR---EPRTPAQ-STRESWKPTHRARESPGNPRRARESPGNQPTQ---- 70
+ +P N+P+ +R + RTP++ ST +A + + RR S G P +
Sbjct: 71 KRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSR 130
Query: 71 -SMREPR---TPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRR 126
S R P TP + +P A + R P + Q+G+ RP S RE ++ R
Sbjct: 131 SSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQPRN 190
Query: 127 ARQSPRNPRRARG 139
+ P G
Sbjct: 191 LSKKSYRPPGGSG 203
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 12 PGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQS 71
P P + + P +S P PA S P+ + +RA P N+P+
Sbjct: 26 PKPPASLKSTKSATPNRSL-VPTKPATSRNSVMSPSSSKSTKSTSTKRA---PSNRPSSR 81
Query: 72 MR---EPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRAR 128
R + RTP++ + ++ + + A +A QR + S G P + R +R
Sbjct: 82 SRVRSKARTPSRVSTDT-RTSKASKASDVRCHQRRGTHSRGRTPGR----------RGSR 130
Query: 129 QSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPRTTH 183
S R+P RA + P + +P A R P + +RG PRT++
Sbjct: 131 SSKRSPSRA-----STPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSN 180
Score = 39.7 bits (91), Expect = 0.002
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 17 RARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPR 76
R +S + +S + RTP + +W S + R + + ++ + S R+
Sbjct: 328 RHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKES 387
Query: 77 TPAQSTRESWKPTHAEQARAPETDQRGASESP----GNRPTQSTRESQETDLRRARQSPR 132
+QS + + H+ + R S SP ++S ++++ R+ R
Sbjct: 388 GRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKAR 447
Query: 133 NPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD-PHEARGS 174
+ R+R R +R P K + +R+P + H GS
Sbjct: 448 DRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGS 490
Score = 39.7 bits (91), Expect = 0.002
Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 16/179 (8%)
Query: 5 EHRARESPGNP--RRARESPGNQPTQS-TREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
+HR SP R SP Q S +R P +R R R +P +AR
Sbjct: 376 DHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKAR 435
Query: 62 E-----SPGNQPTQSMREPRTPAQSTRESWKPTHAE---QARAPETDQRGA---SESPGN 110
+ SP +S A+ S P A ++R+P ++ + S S
Sbjct: 436 DCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKER 495
Query: 111 RPTQSTRESQETDLRRARQSP--RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD 167
+S S+E R++R S R+ RR+R R + +R P K + +R+P +
Sbjct: 496 DHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEE 554
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 14/177 (7%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQS-----TRESWKPTHRARESPGNPRR 59
+H SP R S + R+P ++ +R +K R+R +P +
Sbjct: 400 DHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSR--SPNK 457
Query: 60 ARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPT--QSTR 117
AR+ + ++S + R ++S S + H++ + S SP QS
Sbjct: 458 ARD---HSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRS 514
Query: 118 ESQETDLRRAR--QSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEAR 172
S+E D RR+R R R++R R +R P + +R+P + R
Sbjct: 515 SSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRR 571
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R R +P +AR+ ++ R+ R+ ++S ++ + + R SP
Sbjct: 423 RDRSRSRSPNKARDCSRSRSPYKARD-RSRSRSPNKARDHSRSRSPNKARDRSRSRSPSK 481
Query: 67 QPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRR 126
+ S + + R S P+ Q R R +S+ +R ++S + ++ R
Sbjct: 482 ERDHSQLGSPSKERDHRRSRSPSKERQCR----QSRSSSKERDHRRSRSPSKERQRRQSR 537
Query: 127 ARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAP--ETDPHEARGS 174
+ R+ ++R R + +R P K + R+P E + ++R S
Sbjct: 538 SPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSS 587
Score = 36.6 bits (83), Expect = 0.016
Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 15/150 (10%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
P +E R+S + S P + + R P S++E R GN ++R
Sbjct: 575 PSKERERRQSRSSSEERDHSRSRSPNKQSGYSR-PRASSKEKAHSRSRTPSKEGNHSQSR 633
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWK--PTHAEQARAPETDQRGASESPGNRPTQSTRES 119
S PR+P WK PT T + +S SP P+ S
Sbjct: 634 TSSKESDPSQSTVPRSP------DWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLS 687
Query: 120 QETDLRRARQSPRNPRRARGSPGNRPAQST 149
Q+ A S PG R + S+
Sbjct: 688 QDDSQADATTSKAT------LPGERSSSSS 711
Score = 35.8 bits (81), Expect = 0.027
Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 18/177 (10%)
Query: 18 ARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRT 77
++E N S+R+ ++ Q S + ++ E + ++ QS + R+
Sbjct: 227 SKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRS 286
Query: 78 PAQSTRESWKPTHA---------EQARAPETDQRGA-------SESPGNRPTQSTRESQE 121
P +S S K TH+ +RA ++G S+S + +S +S+
Sbjct: 287 PRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRT 346
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTN--AEHARAPETDPHEARGSHR 176
R+ RNP + R +R + R+ R ++ E R+ P++ R R
Sbjct: 347 PRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSR 403
Score = 33.9 bits (76), Expect = 0.10
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Query: 37 AQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARA 96
+Q R S +H +S R R + +++ + R+ + S S + H +
Sbjct: 324 SQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSP 383
Query: 97 PETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTRE---PR 153
+ R S SP + S S+ + R R R+P +AR +R R+ R
Sbjct: 384 RKESGRSQSGSPNKQRDHS--RSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSR 441
Query: 154 KPTNAEHARAPETDPHEARGSHR 176
P A R+ P++AR R
Sbjct: 442 SPYKARD-RSRSRSPNKARDHSR 463
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 48.1 bits (113), Expect = 5e-06
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
E+ + RE + R RE ++ + R+ RE+ T R R+ ++ RE+
Sbjct: 128 EKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRET--ETERERDREREKQKERET 185
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRE-SQET 122
++ Q E Q+ RE + + R ETD+ G E+ R Q R+ +E
Sbjct: 186 ERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKER 245
Query: 123 DLRRARQSPRNPRRARGSPGNRPAQSTREPRK 154
D R R+ R R + R + E R+
Sbjct: 246 DRERDRKEERKKERKKERKKERKEKKKEEKRR 277
Score = 44.7 bits (104), Expect = 6e-05
Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
E R +E N R RE + T+ R+ Q RE + R RE + + RE
Sbjct: 101 ERRRKEKETNRNRDRE----KQTEIERDREREKQKGRERERDRGRERERDRDREKERERQ 156
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTH------------AEQARAPETDQRGASESPGNRP 112
+ RE T + RE K E+ R +TD+ E R
Sbjct: 157 TEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDR----ERDRQRK 212
Query: 113 TQSTRE-------SQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAE 159
TQ+ R+ +ETD RR RQ R+ + R +R + +E +K E
Sbjct: 213 TQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKE 266
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 21/155 (13%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREP--RTPAQSTRESWKPTHRARESPGNPRRA- 60
E R RE + ++ G + T++ RE Q RE+ + R R++ R
Sbjct: 144 ERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQT 203
Query: 61 -RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
RE + TQ+ R+ T + R ETD+R + +R + R
Sbjct: 204 DRERDRQRKTQTERQRETDREGER--------------ETDRRRERQRDRDRGKERDR-- 247
Query: 120 QETDLRRARQSPRNPRRARGSPGNRPAQSTREPRK 154
E D + R+ R R + + + RE +K
Sbjct: 248 -ERDRKEERKKERKKERKKERKEKKKEEKRREDKK 281
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 48.1 bits (113), Expect = 5e-06
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQS-TRESWKPTHRARESPGNPRRARESPGNQPT 69
SP +P + SP PT + P +P+ S T S+ PT + SP +P + SP PT
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSPSYSPTSPSYSPT 1737
Query: 70 QSMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRAR 128
P +P S T ++ PT + T + SP PT S
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSPSYS---PTSPSYSPTSPNYTPT-----SPNYSPTSPS 1789
Query: 129 QSPRNPRRARGSPGNRPAQSTREPRKPT 156
SP +P + SP P+ P+ PT
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPT 1817
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 17/175 (9%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQS-TRESWKPTHRARESPGNPRRARESPGNQPT 69
SP +P SP PT + P +P+ S T S+ P+ R +P +P SP P+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS-SPRYTPQSPTYTPSSPSYSPS 1828
Query: 70 QSMREPRTPAQS-TRESWKPTHAE----QARAPETDQRGASESPGNRPTQSTRESQETDL 124
P +P + T S+ P+ E + T + + SP PT T
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP----- 1883
Query: 125 RRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHA-----RAPETDPHEARGS 174
+ SP +P + SP P P PT + + +P P +GS
Sbjct: 1884 TTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGS 1938
Score = 43.5 bits (101), Expect = 1e-04
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 6/146 (4%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
+P +P + SP PT P +P+ S + SP +P+ + SP PT
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 71 SMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
P TP S T ++ PT T + + SP PT + + T +
Sbjct: 1879 PTYSPTTPKYSPTSPTYSPTSPVYT---PTSPKYSPTSPTYSPT--SPKYSPTSPTYSPT 1933
Query: 130 SPRNPRRARGSPGNRPAQSTREPRKP 155
SP+ + SPG P T P
Sbjct: 1934 SPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 37.0 bits (84), Expect = 0.012
Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 6/150 (4%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQ--STRESWKPTHRARESPGNPRRARESPGNQP 68
SPG +PG+ + P P+ + S+ PT A E +SP P
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 69 TQSMREPRTPAQS-TRESWKPTHAEQA-RAPETDQRGASESPGNRPTQSTRESQETDLRR 126
T P +P+ S T ++ PT + +P S SP + T S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TS 1675
Query: 127 ARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
SP +P + SP P + P P+
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1705
Score = 33.5 bits (75), Expect = 0.13
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQS-TRESWKPTHRARESPGNPRRARESPGNQPT 69
SP +P + +P PT T P +P + T + PT SP +P+ + SP PT
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTY-SPTSPKYSPTSPTYSPT 1933
Query: 70 QSMREPRTPAQSTRESWKPTHAEQARAPETD 100
+P PT++ + A D
Sbjct: 1934 SPKGSTYSPTSPGYSPTSPTYSLTSPAISPD 1964
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 48.1 bits (113), Expect = 5e-06
Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 2/154 (1%)
Query: 12 PGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQS 71
PG P R GNQ + P P + + +HR PG P R GNQ
Sbjct: 96 PGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGP 155
Query: 72 MREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSP 131
P P + + + AR+P +G + GN+P + A +P
Sbjct: 156 PPHPGKPEGPPPQ--EGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNP 213
Query: 132 RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
+ P+ P + R P A+ + P+
Sbjct: 214 QQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPPQ 247
Score = 43.9 bits (102), Expect = 1e-04
Identities = 46/167 (27%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 4 EEHRARESPGNPRRARESPGNQ-----PTQSTREPRTPAQSTRESWKPTHRARESPGNPR 58
+ R PG P+ GNQ P E R P + P H PG P
Sbjct: 46 QPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPH-----PGKPE 100
Query: 59 RARESPGNQ----PTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQ 114
R GNQ P + R P Q +S +P + +G ++S G P
Sbjct: 101 RPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPP-PPPGKPERPPPQGGNQSQGPPPHP 159
Query: 115 STRES---QETDLRRARQSPRNPRRARGSP---GNRPAQSTREPRKP 155
E QE + R+ +SP P + +G P GN+P Q P KP
Sbjct: 160 GKPEGPPPQEGNKSRSARSP--PGKPQGPPQQEGNKP-QGPPPPGKP 203
Score = 40.4 bits (93), Expect = 0.001
Identities = 31/119 (26%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
+ HR PG P R GNQ P P + + AR PG P+ +
Sbjct: 130 QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQ 189
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESP--GNRPTQSTRESQ 120
GN+P Q P P P +Q +AP + P G RP + + Q
Sbjct: 190 EGNKP-QGPPPPGKPQGPPPAGGNP---QQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQ 244
Score = 29.6 bits (65), Expect = 1.9
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
Query: 55 GNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQ 114
G P R GNQP + P P + P Q++ P P RP Q
Sbjct: 34 GKPEGRRPQGGNQPQRPPPPPGKP-----QGPPPQGGNQSQGPPPPPG----KPEGRPPQ 84
Query: 115 STRESQETDL---RRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAP 164
+SQ + R P+ +++G+P P + R P + N H P
Sbjct: 85 GGNQSQGPPPHPGKPERPPPQGGNQSQGTP-PPPGKPERPPPQGGNQSHRPPP 136
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 47.4 bits (111), Expect = 9e-06
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 3 GEEHRARESPGNPRRARESPG------------NQPTQSTREPRTPAQ-----STRESWK 45
G E + E PG P+ + PG PTQ P+ AQ S ++
Sbjct: 377 GSEKPSSEQPG-PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG 435
Query: 46 PTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGAS 105
PT + PG PG P Q +T AQ T + P+ P Q G +
Sbjct: 436 PTKTPVQQPG--------PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPA 487
Query: 106 ESPGNRPTQSTRESQETDLRR--------ARQSPRNPRRARGSPGNRPAQSTREPRKPTN 157
+ P +P + SQ+ + A+ SP+ P + P +P + ++P+
Sbjct: 488 KPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK-PPSQQPGSAKPSAQQPSP 546
Query: 158 AEHARAPETDPHEARGS 174
A+ + T P GS
Sbjct: 547 AKPSAQQSTKPVSQTGS 563
Score = 33.5 bits (75), Expect = 0.13
Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 15/140 (10%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
PG+ + P P P P Q + P Q + P+ + PG+ +
Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS----QQPGSTKPPP 511
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE 121
+ PG P P+ S KP + A + Q+ + P + QST+ +
Sbjct: 512 QQPG---------PAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ--QSTKPVSQ 560
Query: 122 TDLRRARQSPRNPRRARGSP 141
T + Q P A+ P
Sbjct: 561 TGSGKPLQPPTVSPSAKQPP 580
Score = 29.6 bits (65), Expect = 1.9
Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 19/171 (11%)
Query: 9 RESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
++ P P ++ PG P Q P++ + E + + P + + P P
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPE------KIKSQPPGTGKPIQGPTQTP 265
Query: 69 TQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRAR 128
+ ++R K + + + S+ P +PT +Q+ +++
Sbjct: 266 QTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQ 325
Query: 129 QSPRNP--------RRARGSPGN-----RPAQSTREPRKPTNAEHARAPET 166
P P + PG +P +T+ P +P A +T
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQT 376
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARE-SPGNPRRA 60
PG + + PG+ + + PG+ S ++P S ++S KP + P P
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQPGS-AKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTV 572
Query: 61 RESPGNQPTQSMREPRTPAQSTRE 84
S P+Q + + P +T E
Sbjct: 573 SPSAKQPPSQGLPKTICPLCNTTE 596
Score = 27.3 bits (59), Expect = 9.6
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 10/159 (6%)
Query: 1 MPGEEHRAR---ESPGNPRRARESPGNQPTQS-TREPRTPA---QSTRESWKPTHRARES 53
+P E+ +A + P P+ + + + S T +P P+ QS E K T +
Sbjct: 740 VPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEE-KTTPPLKTD 798
Query: 54 PGNPRRARESPGNQ--PTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNR 111
P ++ G + P S PR + S S +E + D E P
Sbjct: 799 SAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKA 858
Query: 112 PTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTR 150
T+ + + + + +P PR G P QS +
Sbjct: 859 QTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPK 897
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 47.4 bits (111), Expect = 9e-06
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 3 GEEHRARESPGNPRRARESPG------------NQPTQSTREPRTPAQ-----STRESWK 45
G E + E PG P+ + PG PTQ P+ AQ S ++
Sbjct: 377 GSEKPSSEQPG-PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG 435
Query: 46 PTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGAS 105
PT + PG PG P Q +T AQ T + P+ P Q G +
Sbjct: 436 PTKTPVQQPG--------PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPA 487
Query: 106 ESPGNRPTQSTRESQETDLRR--------ARQSPRNPRRARGSPGNRPAQSTREPRKPTN 157
+ P +P + SQ+ + A+ SP+ P + P +P + ++P+
Sbjct: 488 KPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK-PPSQQPGSAKPSAQQPSP 546
Query: 158 AEHARAPETDPHEARGS 174
A+ + T P GS
Sbjct: 547 AKPSAQQSTKPVSQTGS 563
Score = 33.5 bits (75), Expect = 0.13
Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 15/140 (10%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
PG+ + P P P P Q + P Q + P+ + PG+ +
Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS----QQPGSTKPPP 511
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE 121
+ PG P P+ S KP + A + Q+ + P + QST+ +
Sbjct: 512 QQPG---------PAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ--QSTKPVSQ 560
Query: 122 TDLRRARQSPRNPRRARGSP 141
T + Q P A+ P
Sbjct: 561 TGSGKPLQPPTVSPSAKQPP 580
Score = 29.6 bits (65), Expect = 1.9
Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 19/171 (11%)
Query: 9 RESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
++ P P ++ PG P Q P++ + E + + P + + P P
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPE------KIKSQPPGTGKPIQGPTQTP 265
Query: 69 TQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRAR 128
+ ++R K + + + S+ P +PT +Q+ +++
Sbjct: 266 QTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQ 325
Query: 129 QSPRNP--------RRARGSPGN-----RPAQSTREPRKPTNAEHARAPET 166
P P + PG +P +T+ P +P A +T
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQT 376
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARE-SPGNPRRA 60
PG + + PG+ + + PG+ S ++P S ++S KP + P P
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQPGS-AKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTV 572
Query: 61 RESPGNQPTQSMREPRTPAQSTRE 84
S P+Q + + P +T E
Sbjct: 573 SPSAKQPPSQGLPKTICPLCNTTE 596
Score = 27.3 bits (59), Expect = 9.6
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 10/159 (6%)
Query: 1 MPGEEHRAR---ESPGNPRRARESPGNQPTQS-TREPRTPA---QSTRESWKPTHRARES 53
+P E+ +A + P P+ + + + S T +P P+ QS E K T +
Sbjct: 740 VPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEE-KTTPPLKTD 798
Query: 54 PGNPRRARESPGNQ--PTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNR 111
P ++ G + P S PR + S S +E + D E P
Sbjct: 799 SAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKA 858
Query: 112 PTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTR 150
T+ + + + + +P PR G P QS +
Sbjct: 859 QTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPK 897
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 47.4 bits (111), Expect = 9e-06
Identities = 42/168 (25%), Positives = 57/168 (33%), Gaps = 21/168 (12%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPT 69
E P P +PT T EP TP + T S + E P P P +PT
Sbjct: 638 EKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPT 697
Query: 70 QSMRE-----------PRTPAQSTRESWKPTH-----AEQARAPETDQRGASESPGNRPT 113
SM E P P T + PT E+ P +E P P
Sbjct: 698 ISMEETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE 757
Query: 114 QSTRESQETDLRRAR-----QSPRNPRRARGSPGNRPAQSTREPRKPT 156
+ T +++ + + + P P P +P ST EP PT
Sbjct: 758 KPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTEEPTTPT 805
Score = 45.1 bits (105), Expect = 4e-05
Identities = 43/159 (27%), Positives = 59/159 (37%), Gaps = 13/159 (8%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQS--------TRESWKPTHRARESPGNPRRAR 61
E P P+ P +PT ST +P P++ T S KPT E P P
Sbjct: 582 EKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPT-ILTEKPTIPSEKP 640
Query: 62 ESPGNQPTQSMREPRTPAQ--STRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
P +PT S +P P + +T T E+ P +E P + T
Sbjct: 641 TIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISM 700
Query: 120 QETDLRRARQ--SPRNPRRARGSPGNRPAQSTREPRKPT 156
+ET + + SP P P +ST P KPT
Sbjct: 701 EETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPT 739
Score = 45.1 bits (105), Expect = 4e-05
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 10/154 (6%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQS-TRESWKPTHRARESPGNPRRARESPGNQP 68
E P P P +PT T +P P++ T S KPT + E P P +P +
Sbjct: 610 EKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTI-STEKPTVPTEEPTTPTEET 668
Query: 69 TQSMREPRTPAQS----TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
T SM EP P + T + PT ET ++E P P + T +++ +
Sbjct: 669 TTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETII--STEKPTISPEKPTIPTEKPTI 726
Query: 125 --RRARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
++ SP P P + T P KPT
Sbjct: 727 PTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPT 760
Score = 42.4 bits (98), Expect = 3e-04
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPT 69
E P P P +PT S +P TP + S + E P P P +PT
Sbjct: 736 EKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPT 795
Query: 70 QSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
S EP TP + T S E+ P E P ++T +ET + +
Sbjct: 796 ISTEEPTTPTEETTIS-----TEKPSIP-------MEKPTLPTEETTTSVEETTISTEKL 843
Query: 130 SPRNPRRARGSPGNRPAQSTREPRKPT 156
+ P +P ST +P PT
Sbjct: 844 T---------IPMEKPTISTEKPTIPT 861
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 10 ESPGNPRRARESPGNQPTQSTRE-----------PRTPAQSTRESWKPTHRARESPGNPR 58
E P P P +PT S E P P T + PT ++ SP P
Sbjct: 680 EKPSIPTEKPSIPTEKPTISMEETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPT 739
Query: 59 RARESPG---NQPTQSMREPRTPAQS--------TRESWKPTHAEQARAPETDQRGASES 107
E P +PT S +P TP + T + KPT + T++ S
Sbjct: 740 TPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTE 799
Query: 108 PGNRPTQSTRESQE 121
PT+ T S E
Sbjct: 800 EPTTPTEETTISTE 813
Score = 32.7 bits (73), Expect = 0.23
Identities = 39/153 (25%), Positives = 53/153 (34%), Gaps = 14/153 (9%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
SP P + E +PT T +P P + T S + E P P +PT
Sbjct: 909 SPEKPTISTE----KPTIPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTI 964
Query: 71 SMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
S +P P + T + KPT + T++ A P PT T L
Sbjct: 965 STEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKLTALRPPHPSPT-------ATGLAALVM 1017
Query: 130 SPRNPRRARGSP--GNRPAQSTREPRKPTNAEH 160
SP P S G + R P NA +
Sbjct: 1018 SPHAPSTPMTSVILGTTTTSRSSTERCPPNARY 1050
Score = 32.0 bits (71), Expect = 0.39
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 23/158 (14%)
Query: 11 SPGNPRRARESPG--NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
SP + E+ G PT ST++P + KP+ E P P+ P +P
Sbjct: 546 SPVSSTGPSETTGLTENPTISTKKPTVSIE------KPSVTT-EKPTVPKEKPTIPTEKP 598
Query: 69 TQSMREPRTPAQS--------TRESWKPT-HAEQARAPETDQRGASESP---GNRPTQST 116
T S +P P++ T S KPT E+ P SE P +PT T
Sbjct: 599 TISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPT 658
Query: 117 RE--SQETDLRRARQSPRNPRRARGSPGNRPAQSTREP 152
E + + + + P P P +P+ T +P
Sbjct: 659 EEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKP 696
Score = 27.3 bits (59), Expect = 9.6
Identities = 37/157 (23%), Positives = 52/157 (33%), Gaps = 23/157 (14%)
Query: 22 PGNQPTQSTREPRT------------------PAQSTRESWKPTHRARESPGN---PRRA 60
P +PT T E T P ST + PT + SP P
Sbjct: 818 PMEKPTLPTEETTTSVEETTISTEKLTIPMEKPTISTEKPTIPTEKPTISPEKLTIPTEK 877
Query: 61 RESPGNQPTQSMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
P +PT + E + T + KPT + + T++ PT+ T S
Sbjct: 878 LTIPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTEKPTIPTEETTIS 937
Query: 120 QETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
E L + P P +P ST +P PT
Sbjct: 938 TE-KLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPT 973
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 47.4 bits (111), Expect = 9e-06
Identities = 42/168 (25%), Positives = 57/168 (33%), Gaps = 21/168 (12%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPT 69
E P P +PT T EP TP + T S + E P P P +PT
Sbjct: 638 EKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPT 697
Query: 70 QSMRE-----------PRTPAQSTRESWKPTH-----AEQARAPETDQRGASESPGNRPT 113
SM E P P T + PT E+ P +E P P
Sbjct: 698 ISMEETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE 757
Query: 114 QSTRESQETDLRRAR-----QSPRNPRRARGSPGNRPAQSTREPRKPT 156
+ T +++ + + + P P P +P ST EP PT
Sbjct: 758 KPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTEEPTTPT 805
Score = 45.1 bits (105), Expect = 4e-05
Identities = 43/159 (27%), Positives = 59/159 (37%), Gaps = 13/159 (8%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQS--------TRESWKPTHRARESPGNPRRAR 61
E P P+ P +PT ST +P P++ T S KPT E P P
Sbjct: 582 EKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPT-ILTEKPTIPSEKP 640
Query: 62 ESPGNQPTQSMREPRTPAQ--STRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
P +PT S +P P + +T T E+ P +E P + T
Sbjct: 641 TIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISM 700
Query: 120 QETDLRRARQ--SPRNPRRARGSPGNRPAQSTREPRKPT 156
+ET + + SP P P +ST P KPT
Sbjct: 701 EETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPT 739
Score = 45.1 bits (105), Expect = 4e-05
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 10/154 (6%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQS-TRESWKPTHRARESPGNPRRARESPGNQP 68
E P P P +PT T +P P++ T S KPT + E P P +P +
Sbjct: 610 EKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTI-STEKPTVPTEEPTTPTEET 668
Query: 69 TQSMREPRTPAQS----TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
T SM EP P + T + PT ET ++E P P + T +++ +
Sbjct: 669 TTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETII--STEKPTISPEKPTIPTEKPTI 726
Query: 125 --RRARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
++ SP P P + T P KPT
Sbjct: 727 PTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPT 760
Score = 42.4 bits (98), Expect = 3e-04
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Query: 10 ESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPT 69
E P P P +PT S +P TP + S + E P P P +PT
Sbjct: 736 EKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPT 795
Query: 70 QSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
S EP TP + T S E+ P E P ++T +ET + +
Sbjct: 796 ISTEEPTTPTEETTIS-----TEKPSIP-------MEKPTLPTEETTTSVEETTISTEKL 843
Query: 130 SPRNPRRARGSPGNRPAQSTREPRKPT 156
+ P +P ST +P PT
Sbjct: 844 T---------IPMEKPTISTEKPTIPT 861
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 10 ESPGNPRRARESPGNQPTQSTRE-----------PRTPAQSTRESWKPTHRARESPGNPR 58
E P P P +PT S E P P T + PT ++ SP P
Sbjct: 680 EKPSIPTEKPSIPTEKPTISMEETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPT 739
Query: 59 RARESPG---NQPTQSMREPRTPAQS--------TRESWKPTHAEQARAPETDQRGASES 107
E P +PT S +P TP + T + KPT + T++ S
Sbjct: 740 TPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTE 799
Query: 108 PGNRPTQSTRESQE 121
PT+ T S E
Sbjct: 800 EPTTPTEETTISTE 813
Score = 32.7 bits (73), Expect = 0.23
Identities = 39/153 (25%), Positives = 53/153 (34%), Gaps = 14/153 (9%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
SP P + E +PT T +P P + T S + E P P +PT
Sbjct: 909 SPEKPTISTE----KPTIPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTI 964
Query: 71 SMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQ 129
S +P P + T + KPT + T++ A P PT T L
Sbjct: 965 STEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKLTALRPPHPSPT-------ATGLAALVM 1017
Query: 130 SPRNPRRARGSP--GNRPAQSTREPRKPTNAEH 160
SP P S G + R P NA +
Sbjct: 1018 SPHAPSTPMTSVILGTTTTSRSSTERCPPNARY 1050
Score = 32.0 bits (71), Expect = 0.39
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 23/158 (14%)
Query: 11 SPGNPRRARESPG--NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQP 68
SP + E+ G PT ST++P + KP+ E P P+ P +P
Sbjct: 546 SPVSSTGPSETTGLTENPTISTKKPTVSIE------KPSVTT-EKPTVPKEKPTIPTEKP 598
Query: 69 TQSMREPRTPAQS--------TRESWKPT-HAEQARAPETDQRGASESP---GNRPTQST 116
T S +P P++ T S KPT E+ P SE P +PT T
Sbjct: 599 TISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPT 658
Query: 117 RE--SQETDLRRARQSPRNPRRARGSPGNRPAQSTREP 152
E + + + + P P P +P+ T +P
Sbjct: 659 EEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKP 696
Score = 27.3 bits (59), Expect = 9.6
Identities = 37/157 (23%), Positives = 52/157 (33%), Gaps = 23/157 (14%)
Query: 22 PGNQPTQSTREPRT------------------PAQSTRESWKPTHRARESPGN---PRRA 60
P +PT T E T P ST + PT + SP P
Sbjct: 818 PMEKPTLPTEETTTSVEETTISTEKLTIPMEKPTISTEKPTIPTEKPTISPEKLTIPTEK 877
Query: 61 RESPGNQPTQSMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRES 119
P +PT + E + T + KPT + + T++ PT+ T S
Sbjct: 878 LTIPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTEKPTIPTEETTIS 937
Query: 120 QETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPT 156
E L + P P +P ST +P PT
Sbjct: 938 TE-KLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPT 973
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 46.2 bits (108), Expect = 2e-05
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA-RESPGNQPTQSMREPRTPA 79
+P +P+ ST +P TP +++ + T+R+ S P +P QP+ S +P TP
Sbjct: 1411 APKLEPSTSTDQPVTPEPTSQATRGRTNRS--SVKTPETVVPTAPELQPSTSTDQPVTPE 1468
Query: 80 QSTRESWKPTHAEQARAPETDQRGASE----SPGNRPTQSTRESQETDLRRARQSPRNPR 135
+++ + T + PET A E + ++P S S+ T R+ R S + P
Sbjct: 1469 PTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPE 1528
Query: 136 R-ARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIP 179
+P +P+ ST +P P A T+ + +P
Sbjct: 1529 TVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVP 1573
Score = 40.4 bits (93), Expect = 0.001
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQ 80
+P P+ ST +P TP +++ + T+R+ P +P QP+ S +P T
Sbjct: 1124 APEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEP-VVPTAPELQPSTSTDQPVTSEP 1182
Query: 81 STRESWKPTHAEQARAPETDQRGASE----SPGNRPTQSTRESQETDLRRARQSPRNPRR 136
+++ + + PET A E + +RP S SQ T R+ R S + P
Sbjct: 1183 TSQVTRGRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEP 1242
Query: 137 -ARGSPGNRPAQSTREP 152
+P +P+ ST +P
Sbjct: 1243 VVPTAPELQPSTSTDQP 1259
Score = 38.1 bits (87), Expect = 0.005
Identities = 40/176 (22%), Positives = 66/176 (37%), Gaps = 20/176 (11%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARE-------SPGNQPTQSMR 73
+P QP+ ST +P T +PT++A N + +P +P+ S
Sbjct: 1247 APELQPSTSTDQPVTS--------EPTYQATRGRKNRSSVKTPEPVVPTAPELRPSTSTD 1298
Query: 74 EPRTPAQSTRESWKPTHAEQARAPETDQRGASE----SPGNRPTQSTRESQETDLRRARQ 129
P TP ++R + T+ + PET A E + ++P S+ T R
Sbjct: 1299 RPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMS 1358
Query: 130 SPRNPRRARG-SPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPRTTHL 184
S +NP +P P+ ST +P P A + + +P L
Sbjct: 1359 SVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKL 1414
Score = 36.6 bits (83), Expect = 0.016
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQ 80
+P QP+ S + TP ++R + T+R+ P +P PT S +P TP
Sbjct: 1575 APELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPV-VPTAPEPHPTTSTDQPVTPKL 1633
Query: 81 STRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGS 140
++R + + T+ + P+ + AS+ PT Q Q ++ +
Sbjct: 1634 TSRATRRKTNRSSVKTPKPVEPAASDLEPFTPT-----DQSVTPEAIAQGGQSKTLRSST 1688
Query: 141 PGNRPAQSTREPRKPTNAEHARAPE 165
P +T E + P + +PE
Sbjct: 1689 VRAMPVPTTPEFQSPVTTDQPISPE 1713
Score = 33.1 bits (74), Expect = 0.18
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 29 STREPRTPAQSTRESW--KPTHRARESPG-NPRRARES-PGNQPTQSMREPRTPAQSTRE 84
S P P S E + KP R R+S P A + P P+ S +P TP +++
Sbjct: 1086 SQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQA 1145
Query: 85 SWKPTHAEQARAPETDQRGASE----SPGNRPTQSTRESQETDLRRARQSPRNP 134
+ T+ + PE A E + ++P S SQ T R++R S + P
Sbjct: 1146 TRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVKTP 1199
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 46.2 bits (108), Expect = 2e-05
Identities = 47/194 (24%), Positives = 72/194 (37%), Gaps = 22/194 (11%)
Query: 1 MPGEEHRA---RESPGNPRRARESP----GNQPTQSTREPRTPAQSTRESWKPT--HRAR 51
MPGE +A S + R + P +P ST P P S + K H+A+
Sbjct: 283 MPGERIKAGSGNSSQPSLREGHDKPVFNGAGKPHSSTSSPSVPKTSASRTQKSAVEHKAK 342
Query: 52 ESPGNPRRARESPGNQPTQSMREP--RTPAQSTRESWKPTHAEQAR-----APETDQRGA 104
+S +P +R P P + P R P S+ + AR P ++
Sbjct: 343 KSLSHPSHSRPGPMVTPHNKAKSPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRRQNG 402
Query: 105 SESPGNRPTQSTRESQETDLRRARQS------PRNPRRARGSPGNRPAQSTREPRKPTNA 158
S S G + S + D +R++ P P + G PG + S R ++
Sbjct: 403 SSSSGPERSISGSKKPTNDSNPSRRTVSGTCGPGQPASSSGGPGRPISGSVSSARPLGSS 462
Query: 159 EHARAPETDPHEAR 172
P + PHE R
Sbjct: 463 RGPGRPVSSPHELR 476
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 45.8 bits (107), Expect = 3e-05
Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 13/187 (6%)
Query: 3 GEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARE 62
G R SP R+ SP + +S+ E R + S R P+ R+ SP R
Sbjct: 1640 GPSQRRHHSPSE--RSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPS--ERRHR 1695
Query: 63 SPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQET 122
SP + + E R + S R P E SE + P++ S
Sbjct: 1696 SPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPS- 1754
Query: 123 DLRRARQSPRNPRRARGSPGNRPAQSTREPR--KPTNAEHARAPETDPH--EARGSHRFI 178
R+ SP R+ SP R +S E R P+ H E H R H +
Sbjct: 1755 --ERSHCSP--SERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPL 1810
Query: 179 PRTTHLL 185
R+ H L
Sbjct: 1811 ERSRHSL 1817
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 13/176 (7%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R+ SP +R SP + S E + S R P+ R SP S +
Sbjct: 1604 RSWRSPS--QRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERS 1661
Query: 67 QPTQSMREPRTPAQ------STRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
+ S R R+P+Q S R P+ + RG SE + P ++ S
Sbjct: 1662 HRSSSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSP---SKRSH 1718
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHR 176
+ RR+ +SP R+ SP R S E R + +E + ++ S R
Sbjct: 1719 RSPARRSHRSP--SERSHHSPSERSHHSPSERRHHSPSERSHCSPSERSHCSPSER 1772
Score = 43.1 bits (100), Expect = 2e-04
Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 10/183 (5%)
Query: 3 GEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARE 62
G R R +P R SP + +S+ E R + S R P+ + SP R+
Sbjct: 1552 GPSERTRHNPS--WRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSSPS--ERSWR 1607
Query: 63 SPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRE-SQE 121
SP + P S E + H+ R+ + SP R +S E S
Sbjct: 1608 SPSQR--NHCSPPERSCHSLSE--RGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHR 1663
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHE-ARGSHRFIPR 180
+ R +SP S + + S R R P+ H E H ++ SHR R
Sbjct: 1664 SSSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPAR 1723
Query: 181 TTH 183
+H
Sbjct: 1724 RSH 1726
Score = 42.4 bits (98), Expect = 3e-04
Identities = 43/182 (23%), Positives = 63/182 (34%), Gaps = 7/182 (3%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R SP S + S R R+P++ + S + R SP S +
Sbjct: 1628 RGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRS--SSERRHRSPSQRSHRGPSERS 1685
Query: 67 QPTQSMREPRTPAQSTRE--SWKPTHAEQARAPETDQRGASESPGNRPTQSTRE-SQETD 123
+ S R R+P+Q + S + H+ R+ + R + SP R S E S +
Sbjct: 1686 HCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSP 1745
Query: 124 LRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPH--EARGSHRFIPRT 181
R SP S + + S R R P+ H E H R H R
Sbjct: 1746 SERRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERR 1805
Query: 182 TH 183
H
Sbjct: 1806 RH 1807
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 12/165 (7%)
Query: 7 RARESPGNPR------RARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRA 60
R+ SP R R+ SP + S E R + S R P+ ++ SP R+
Sbjct: 1740 RSHHSPSERRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPSEKSHHSPSE--RS 1797
Query: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
SP + S E + R P+ R+ E R SE R + +S
Sbjct: 1798 HHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISE----RSHSPSEKSH 1853
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
+ L R+R SP R S + S R R P+ R E
Sbjct: 1854 LSPLERSRCSPSERRGHSSSGKTCHSPSERSHRSPSGMRQGRTSE 1898
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 17 RARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSM--RE 74
R+ SP + +S E R + S + P+ R+ SP R R SP + S+ R
Sbjct: 1764 RSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSE--RRRHSPLERSRHSLLERS 1821
Query: 75 PRTPAQS-TRESWKPTHA------------------EQARAPETDQRGASES-------- 107
R+P++ + S++ +H E++R +++RG S S
Sbjct: 1822 HRSPSERRSHRSFERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHSSSGKTCHSPS 1881
Query: 108 -------PGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKP 155
G R +++ S + R R SP R R S N + S R R P
Sbjct: 1882 ERSHRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPSGRNHCSPSERSRRSP 1936
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/166 (24%), Positives = 56/166 (33%), Gaps = 19/166 (11%)
Query: 27 TQSTREP-RTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRES 85
T S +P RT + + K E+ + +PG + R P + +
Sbjct: 1468 TASVGQPLRTVQKDSSSRSKKNFYRNETSSQESKNLSTPGTRV--QARGRILPGSPVKRT 1525
Query: 86 W------KPTHAEQARAP---ETDQRGASESPGNRPT-----QSTRESQETDLRRARQSP 131
W K TH E E RG SE + P+ + SQ + L R SP
Sbjct: 1526 WHRHLKDKLTHKEHNHPSFYRERTPRGPSERTRHNPSWRNHRSPSERSQRSSLERRHHSP 1585
Query: 132 RNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPH--EARGSH 175
S N + S R R P+ H PE H RG H
Sbjct: 1586 SQRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLH 1631
Score = 37.7 bits (86), Expect = 0.007
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 17 RARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPR 76
R+ SP + + + E R+ + + S P+ ++ SP R+R SP + S
Sbjct: 1820 RSHRSPSERRSHRSFE-RSHRRISERSHSPSEKSHLSP--LERSRCSPSERRGHSSSGKT 1876
Query: 77 TPAQSTRESWKPTHAEQARAPETDQRGASE----SPGN-RPTQSTRESQETDLRRARQSP 131
+ S R P+ Q R E R + E SP RP + + + + R+R+SP
Sbjct: 1877 CHSPSERSHRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPSGRNHCSPSERSRRSP 1936
Query: 132 RNPRRARGSPGNRPAQS 148
PG RP+ S
Sbjct: 1937 LKEGLKYSFPGERPSHS 1953
Score = 30.8 bits (68), Expect = 0.87
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQ------STRESWKPTHRARESPGNPRRA 60
R+ SP R+ R S + + R +P++ S R P+ R+R SP
Sbjct: 1883 RSHRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPSGRNHCSPSERSRRSPLKEGLK 1942
Query: 61 RESPGNQPTQSM 72
PG +P+ S+
Sbjct: 1943 YSFPGERPSHSL 1954
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 45.1 bits (105), Expect = 4e-05
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
+HR++ S R+ S N+ T R RTP++ +R R S G R SP
Sbjct: 1896 KHRSK-SRERKRKRSSSRDNRKTVRARS-RTPSRRSRSHTPSRRRRSRSVGRRRSFSISP 1953
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
+ R RTP++ +R T + ++R P +R + S +R R S+
Sbjct: 1954 SRRSRTPSRRSRTPSRRSR-----TPSRRSRTP--SRRSRTPSRRSRTPSRRRRSRSVVR 2006
Query: 125 RRARQ-SPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
RR+ SP RR+R R ++S ++ ++E R+P+
Sbjct: 2007 RRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPK 2048
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 3 GEEHRARESPGNPRRAR-ESPGNQPTQSTREPRTPAQSTRESWKPTHRA--RESPGNPRR 59
GE+ + R+S R R +S ++ + T E R+ A+ R S +HR+ R + RR
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARK-RSSKSKSHRSQTRSRSRSRRR 1870
Query: 60 ARESPGNQPTQSMRE--PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTR 117
R S ++ R +S + K ++ R+ D R + P++ +R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSR 1930
Query: 118 ESQETDLRRARQSPR------NPRRARGSPGNR---PAQSTREP--RKPTNAEHARAP-- 164
+ RR+R R +P R +P R P++ +R P R T + +R P
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 165 -ETDPHEARGSHRFIPRTTHLLGVFRVLKTQ 194
P R S + R + + R+ +++
Sbjct: 1991 RSRTPSRRRRSRSVVRRRSFSISPVRLRRSR 2021
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 45.1 bits (105), Expect = 4e-05
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 5 EHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESP 64
+HR++ S R+ S N+ T R RTP++ +R R S G R SP
Sbjct: 1896 KHRSK-SRERKRKRSSSRDNRKTVRARS-RTPSRRSRSHTPSRRRRSRSVGRRRSFSISP 1953
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
+ R RTP++ +R T + ++R P +R + S +R R S+
Sbjct: 1954 SRRSRTPSRRSRTPSRRSR-----TPSRRSRTP--SRRSRTPSRRSRTPSRRRRSRSVVR 2006
Query: 125 RRARQ-SPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPE 165
RR+ SP RR+R R ++S ++ ++E R+P+
Sbjct: 2007 RRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPK 2048
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 3 GEEHRARESPGNPRRAR-ESPGNQPTQSTREPRTPAQSTRESWKPTHRA--RESPGNPRR 59
GE+ + R+S R R +S ++ + T E R+ A+ R S +HR+ R + RR
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARK-RSSKSKSHRSQTRSRSRSRRR 1870
Query: 60 ARESPGNQPTQSMRE--PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTR 117
R S ++ R +S + K ++ R+ D R + P++ +R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSR 1930
Query: 118 ESQETDLRRARQSPR------NPRRARGSPGNR---PAQSTREP--RKPTNAEHARAP-- 164
+ RR+R R +P R +P R P++ +R P R T + +R P
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 165 -ETDPHEARGSHRFIPRTTHLLGVFRVLKTQ 194
P R S + R + + R+ +++
Sbjct: 1991 RSRTPSRRRRSRSVVRRRSFSISPVRLRRSR 2021
>gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]
Length = 410
Score = 45.1 bits (105), Expect = 4e-05
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 73 REPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPR 132
REPR +P + R P DQ + P +RP R + +D R R R
Sbjct: 8 REPRA---------RPRERDPGRRPHPDQGRTHDRPRDRP-GDPRRKRSSDGNRRRDGDR 57
Query: 133 NPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARG 173
+P R + GNR RE + + R P D H G
Sbjct: 58 DPERDQERDGNRDRNRDRERERERERDPDRGPRRDTHRDAG 98
Score = 44.3 bits (103), Expect = 8e-05
Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTH-RARESPGNPRRARESPGNQPTQSMREPRTPA 79
S +P RE R P + TH R R+ PG+PRR R S GN+ R+P
Sbjct: 5 SGAREPRARPRE-RDPGRRPHPDQGRTHDRPRDRPGDPRRKRSSDGNRRRDGDRDPERDQ 63
Query: 80 QSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARG 139
+ + E+ R E D +R R + + RQS R ARG
Sbjct: 64 ERDGNRDRNRDRERERERERDPDRGPRRDTHRDA-GPRAGEHGVWEKPRQS-RTRDGARG 121
Query: 140 -------SPGNRPAQSTREPRKPTNAEHA-RAPETDPHEARGSHRFIPRT 181
PG P ++ P+ + R PE++P S R++P T
Sbjct: 122 LTWDAAAPPGPAPWEAPEPPQPQRKGDPGRRRPESEP----PSERYLPST 167
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 9/151 (5%)
Query: 3 GEEH-RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
G H R R+ PG+PRR R S GN+ R+P + R+ + +R RE R
Sbjct: 28 GRTHDRPRDRPGDPRRKRSSDGNRRRDGDRDPERDQE--RDGNRDRNRDRE---RERERE 82
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE 121
P P + P W+ + R RG + P + E+ E
Sbjct: 83 RDPDRGPRRDTHRDAGPRAGEHGVWEKPRQSRTR---DGARGLTWDAAAPPGPAPWEAPE 139
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREP 152
+ + P R P R ST P
Sbjct: 140 PPQPQRKGDPGRRRPESEPPSERYLPSTPRP 170
Score = 35.8 bits (81), Expect = 0.027
Identities = 43/151 (28%), Positives = 54/151 (35%), Gaps = 30/151 (19%)
Query: 2 PGEEHRARESPGN--------PRRARESPGNQPTQSTRE-----PRTPAQSTRESWKPTH 48
PG+ R R S GN P R +E GN+ RE R P + R + TH
Sbjct: 38 PGDPRRKRSSDGNRRRDGDRDPERDQERDGNRDRNRDRERERERERDPDRGPR---RDTH 94
Query: 49 RARESPGNPRRARESPGNQPTQSMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASES 107
R PR +P QS R A+ T ++ P APE Q
Sbjct: 95 R----DAGPRAGEHGVWEKPRQS--RTRDGARGLTWDAAAPPGPAPWEAPEPPQPQRKGD 148
Query: 108 PGNRPTQSTRESQETDLRRARQSPRNPRRAR 138
PG R +S S+ R P PR R
Sbjct: 149 PGRRRPESEPPSE-------RYLPSTPRPGR 172
>gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens]
Length = 401
Score = 45.1 bits (105), Expect = 4e-05
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 73 REPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPR 132
REPR +P + R P DQ + P +RP R + +D R R R
Sbjct: 8 REPRA---------RPRERDPGRRPHPDQGRTHDRPRDRP-GDPRRKRSSDGNRRRDGDR 57
Query: 133 NPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARG 173
+P R + GNR RE + + R P D H G
Sbjct: 58 DPERDQERDGNRDRNRDRERERERERDPDRGPRRDTHRDAG 98
Score = 44.3 bits (103), Expect = 8e-05
Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 21 SPGNQPTQSTREPRTPAQSTRESWKPTH-RARESPGNPRRARESPGNQPTQSMREPRTPA 79
S +P RE R P + TH R R+ PG+PRR R S GN+ R+P
Sbjct: 5 SGAREPRARPRE-RDPGRRPHPDQGRTHDRPRDRPGDPRRKRSSDGNRRRDGDRDPERDQ 63
Query: 80 QSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARG 139
+ + E+ R E D +R R + + RQS R ARG
Sbjct: 64 ERDGNRDRNRDRERERERERDPDRGPRRDTHRDA-GPRAGEHGVWEKPRQS-RTRDGARG 121
Query: 140 -------SPGNRPAQSTREPRKPTNAEHA-RAPETDPHEARGSHRFIPRT 181
PG P ++ P+ + R PE++P S R++P T
Sbjct: 122 LTWDAAAPPGPAPWEAPEPPQPQRKGDPGRRRPESEP----PSERYLPST 167
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 9/151 (5%)
Query: 3 GEEH-RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
G H R R+ PG+PRR R S GN+ R+P + R+ + +R RE R
Sbjct: 28 GRTHDRPRDRPGDPRRKRSSDGNRRRDGDRDPERDQE--RDGNRDRNRDRE---RERERE 82
Query: 62 ESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQE 121
P P + P W+ + R RG + P + E+ E
Sbjct: 83 RDPDRGPRRDTHRDAGPRAGEHGVWEKPRQSRTR---DGARGLTWDAAAPPGPAPWEAPE 139
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREP 152
+ + P R P R ST P
Sbjct: 140 PPQPQRKGDPGRRRPESEPPSERYLPSTPRP 170
Score = 35.8 bits (81), Expect = 0.027
Identities = 43/151 (28%), Positives = 54/151 (35%), Gaps = 30/151 (19%)
Query: 2 PGEEHRARESPGN--------PRRARESPGNQPTQSTRE-----PRTPAQSTRESWKPTH 48
PG+ R R S GN P R +E GN+ RE R P + R + TH
Sbjct: 38 PGDPRRKRSSDGNRRRDGDRDPERDQERDGNRDRNRDRERERERERDPDRGPR---RDTH 94
Query: 49 RARESPGNPRRARESPGNQPTQSMREPRTPAQS-TRESWKPTHAEQARAPETDQRGASES 107
R PR +P QS R A+ T ++ P APE Q
Sbjct: 95 R----DAGPRAGEHGVWEKPRQS--RTRDGARGLTWDAAAPPGPAPWEAPEPPQPQRKGD 148
Query: 108 PGNRPTQSTRESQETDLRRARQSPRNPRRAR 138
PG R +S S+ R P PR R
Sbjct: 149 PGRRRPESEPPSE-------RYLPSTPRPGR 172
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 44.7 bits (104), Expect = 6e-05
Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 9/164 (5%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
E R R+ N R R+ + T E + + R+ + T R R+ R E+
Sbjct: 45 ERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTET 104
Query: 64 PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETD 123
+ Q RE RE K E+ ETD+ ++ R T R++++
Sbjct: 105 DRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTED-- 162
Query: 124 LRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD 167
R R R R R T+E + T+ E R ETD
Sbjct: 163 ----RHRERERERKRERERKR---ETKERERHTDMERERQRETD 199
Score = 40.0 bits (92), Expect = 0.001
Identities = 40/178 (22%), Positives = 62/178 (34%), Gaps = 5/178 (2%)
Query: 32 EPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHA 91
E +T + T + R RE R R+ T+ R Q RE +
Sbjct: 2 ESKTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERD-RQRDRERNRERDR 60
Query: 92 EQARAPETDQRGASESPGNRPTQSTRESQ-ETDLRRARQSPRNPRRARGSPGNRPAQSTR 150
++ R +TD+ G + R RE++ E D R R R R + R
Sbjct: 61 DREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVR 120
Query: 151 EPRKPTNAEHARAPETDPHEARGSHRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQK 208
+ + E R +TD R R R R KT++R R E + ++
Sbjct: 121 DREREKQKEMGRERQTDRETDRERERQAERERE---TGRERKTEDRHRERERERKRER 175
Score = 34.3 bits (77), Expect = 0.079
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 13/137 (9%)
Query: 3 GEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESP-------G 55
GE R RE + +R E ++ ++ R T + ++ + R R+ G
Sbjct: 72 GERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMG 131
Query: 56 NPRRA-RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETD-QRGASESPGNRPT 113
R+ RE+ + Q+ RE T + E H E+ R + + +R R T
Sbjct: 132 RERQTDRETDRERERQAERERETGRERKTED---RHRERERERKRERERKRETKERERHT 188
Query: 114 QSTRESQ-ETDLRRARQ 129
RE Q ETD +R RQ
Sbjct: 189 DMERERQRETDRKRDRQ 205
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 44.3 bits (103), Expect = 8e-05
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 3 GEEHRARESPGNPRRARESPGNQPTQSTREPRTP----AQSTRESWKPTHRARESPG--- 55
GEE E+ G + P + +E ++P A+S E+ P +SP
Sbjct: 489 GEEE---EAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVK 545
Query: 56 NPRRARESPGNQPTQSMREPRTP----AQSTRESWKPTHA-----EQARAP-ETDQRGAS 105
+P +A+ SP + +S E ++P A+S E P A E+A++P E +
Sbjct: 546 SPEKAK-SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKA 604
Query: 106 ESPGNRPTQSTRESQETDLRRARQSP---RNPRRARGSPGNRPAQSTREPRKPTNAEHAR 162
+SP +S E+ ++ ++ +SP ++P +A+ SP A+S + + P E A+
Sbjct: 605 KSPVKEEAKSPAEA-KSPVKEEAKSPAEVKSPEKAK-SPTKEEAKSPEKAKSP-EKEEAK 661
Query: 163 APE 165
+PE
Sbjct: 662 SPE 664
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 17/216 (7%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQ--STRESWKPTHRARESPGNPRR 59
P E ++ + +SP + E ++PA+ S ++ PT +SP +
Sbjct: 595 PAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKS 654
Query: 60 ARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPE-----TDQRGASESPGNRPTQ 114
+ P ++ + A+S ++ P AE A++PE + S P +
Sbjct: 655 PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAE-AKSPEKAKSPVKEEAKSPEKAKSPVK 713
Query: 115 STRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGS 174
+S E ++ + P +A+ SP A+S P K + E A+ + EA+
Sbjct: 714 EEAKSPEKAKSPVKEEAKTPEKAK-SPVKEEAKS---PEKAKSPEKAKTLDVKSPEAK-- 767
Query: 175 HRFIPRTTHLLGVFRVLKTQERKRLEEEVKMSQKVE 210
P + + ++EEVK +K +
Sbjct: 768 ---TPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Score = 37.4 bits (85), Expect = 0.009
Identities = 33/204 (16%), Positives = 84/204 (41%), Gaps = 6/204 (2%)
Query: 9 RESPGNPRRARESPGNQPTQSTREPRTP----AQSTRESWKPTHRARESPGNPRRARESP 64
+E +P +A+ SP + +S + ++P A+S ++ P +SP + +
Sbjct: 643 KEEAKSPEKAK-SPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEE 701
Query: 65 GNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDL 124
P ++ + A+S ++ P E+A+ PE + E + + E +T
Sbjct: 702 AKSPEKAKSPVKEEAKSPEKAKSPVK-EEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLD 760
Query: 125 RRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPRTTHL 184
++ ++ + SP ++ + + P K +A +A+ + IP+ +
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV 820
Query: 185 LGVFRVLKTQERKRLEEEVKMSQK 208
+ + + +++E K +++
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEE 844
Score = 36.2 bits (82), Expect = 0.021
Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 24/194 (12%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
P +E + P +A+ SP + +S + ++P + ++ + +E +P +
Sbjct: 769 PAKEEARSPADKFPEKAK-SPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEE 827
Query: 62 ESPGN-------QPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQ 114
E P + + + P TP ++ K A + AP+ E +P +
Sbjct: 828 EKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKE 887
Query: 115 STRESQETDLRRARQSP----RNPRRARGSPGNRPAQST------------REPRKPTNA 158
S E+++ + ++ P P + +P + T +EP KP
Sbjct: 888 SKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEK 947
Query: 159 EHARAPETDPHEAR 172
+ A + D E +
Sbjct: 948 KEAAPEKKDTKEEK 961
Score = 35.0 bits (79), Expect = 0.046
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 58 RRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTR 117
+ A+E G + E A+ E K AE+A +PE + + + P ++
Sbjct: 476 KEAKEEEGKEEEGGEEEE---AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEA-- 530
Query: 118 ESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAP 164
+S E + ++ ++P +A+ SP A+S E + P E A++P
Sbjct: 531 KSPEKEEAKSPAEVKSPEKAK-SPAKEEAKSPPEAKSP-EKEEAKSP 575
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 24 NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTR 83
N STR P + R K R+++ + + G T+ R + + STR
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 84 ESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGN 143
T + + G+S S + + S+ S+ + + SP +P R R
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP-SPSRRRHDNRR 135
Query: 144 RPAQSTREPRKPTNAEHARAPETDP 168
R ++ P++ R+P P
Sbjct: 136 RSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 24 NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTR 83
N STR P + R K R+++ + + G T+ R + + STR
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 84 ESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGN 143
T + + G+S S + + S+ S+ + + SP +P R R
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP-SPSRRRHDNRR 135
Query: 144 RPAQSTREPRKPTNAEHARAPETDP 168
R ++ P++ R+P P
Sbjct: 136 RSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 19 RESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTP 78
RE P QP ++ PR PAQ P+ A P +PR + SP P Q P +P
Sbjct: 281 REEPDLQPQLASEAPRRPAQPP-----PSKSALLPPPSPRVGKRSPPGPPAQPAATPTSP 335
Query: 79 AQSTRESWKP--THAEQARAPETDQRGAS 105
+ T+E P T E+ R ++ G S
Sbjct: 336 HRRTQEPVLPEDTTTEEKRGKKSKSSGPS 364
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/161 (26%), Positives = 57/161 (35%), Gaps = 14/161 (8%)
Query: 12 PGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQS 71
P +PR + SP P Q P +P + T+E P E + P T
Sbjct: 311 PPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAGTAE 370
Query: 72 MREPRTPAQ--STRESWKPTHAEQARAPET--------DQRGASESPGNRPTQSTRESQE 121
R P+TP S R S RA ++R S + P R
Sbjct: 371 SR-PQTPLSEASGRLSALGRSPRLVRAGSRILDKLQFFEERRRSLERSDSPPAPLR--PW 427
Query: 122 TDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHAR 162
LR+AR S P+ RG+P P S E R P + R
Sbjct: 428 VPLRKAR-SLEQPKSERGAPWGTPGASQEELRAPGSVAERR 467
Score = 34.7 bits (78), Expect = 0.060
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 49 RARESPGNPRRARESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESP 108
R +ESP + P + S +P TP + + P+ A Q AP+ Q A E P
Sbjct: 2160 RLQESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPE-P 2218
Query: 109 GNRPTQSTRESQETDLRRARQSPRNP-----------RRARGSPGNRPAQSTREPRKPTN 157
P ++++ + + P P A+G P PA EP KP
Sbjct: 2219 RPEPVRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQG-PSQGPAAPPSEP-KPHA 2276
Query: 158 AEHARAPETDP 168
A AR P
Sbjct: 2277 AVFARVASPPP 2287
Score = 34.3 bits (77), Expect = 0.079
Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 28/190 (14%)
Query: 2 PGEEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRAR 61
P ++ P R ++ +P Q Q+ P TP +S + + A+ P
Sbjct: 2210 PAQDKAPEPRPEPVRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPP 2269
Query: 62 ESPGNQPTQSMREPRTPAQSTRE-----SWKPTHAEQARAPETDQRGASESPGNRPTQST 116
P R P + + P AE+AR P R S + +
Sbjct: 2270 SEPKPHAAVFARVASPPPGAPEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLES 2329
Query: 117 RESQETDLRRARQSP---------------RNPRRA--------RGSPGNRPAQSTREPR 153
E +R+R+SP R P R R SP P + R P
Sbjct: 2330 EAVFEAKFKRSRESPLSLGLRLLSRSRSEERGPFRGAEEEDGIYRPSPAGTPLELVRRPE 2389
Query: 154 KPTNAEHARA 163
+ + + RA
Sbjct: 2390 RSRSVQDLRA 2399
Score = 32.3 bits (72), Expect = 0.30
Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 11/125 (8%)
Query: 61 RESPGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQ 120
RE P QP + PR PAQ P ++ A P R SP P Q +
Sbjct: 281 REEPDLQPQLASEAPRRPAQ-------PPPSKSALLPPPSPRVGKRSPPGPPAQPA--AT 331
Query: 121 ETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFIPR 180
T R Q P P + P AE P+T EA G + R
Sbjct: 332 PTSPHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAGTAE--SRPQTPLSEASGRLSALGR 389
Query: 181 TTHLL 185
+ L+
Sbjct: 390 SPRLV 394
Score = 32.3 bits (72), Expect = 0.30
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 23 GNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQST 82
G P ++ E + S P+ +E+P R AR P + PT S+ P PA T
Sbjct: 2755 GQGPFSNSSEKVFVRGTQDSSAVPSAAHQEAPVTSRPARARPPDSPT-SLAPPLAPAAPT 2813
Query: 83 RESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNP-RRARGSP 141
S + SP + PT ++ + L+ P+ P RR RG
Sbjct: 2814 PPS------------------VTVSPSSPPTPPSQAL--SSLKAVGPPPQTPPRRHRGLQ 2853
Query: 142 GNRPAQSTREPRKPTNAE 159
RPA+ T T +E
Sbjct: 2854 AARPAEPTLPSTHVTPSE 2871
Score = 30.4 bits (67), Expect = 1.1
Identities = 43/173 (24%), Positives = 59/173 (34%), Gaps = 29/173 (16%)
Query: 7 RARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGN 66
R +ESP + P + S +P TP A S P A + P
Sbjct: 2160 RLQESPSLSALSEAQPSSPARPSAPKPSTPKS-----------AEPSATTPSDAPQPPAP 2208
Query: 67 QPTQSMR-EPR-TPAQSTRESWKPTHAEQARAPET---------DQRGASESPGNRPTQS 115
QP Q EPR P ++++ + P + P T G ++ P P
Sbjct: 2209 QPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAP 2268
Query: 116 TRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
E + AR + P G+P R S P P AE AR P P
Sbjct: 2269 PSEPKPHAAVFARVASPPP----GAPEKR-VPSAGGP--PVLAEKARVPTVPP 2314
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 88 PTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQ 147
P + P+ + ASE+P R +Q + A P +PR + SP PAQ
Sbjct: 275 PQSGLRREEPDLQPQLASEAP-------RRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQ 327
Query: 148 STREPRKP--TNAEHARAPETDPHEARG 173
P P E +T E RG
Sbjct: 328 PAATPTSPHRRTQEPVLPEDTTTEEKRG 355
Score = 29.3 bits (64), Expect = 2.5
Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 31/153 (20%)
Query: 12 PGNP----RRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPR----RARES 63
PG P R + + + +P +P+ + + + PG PR R
Sbjct: 530 PGEPPLFSRPSTPKTSRAVSPAAAQPPSPSSAEKPG--------DEPGRPRSRGPAGRTE 581
Query: 64 PGNQPTQSMRE----PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTR-- 117
PG P Q +R P T +++ +E P A PE + P Q+ R
Sbjct: 582 PGEGPQQEVRRRDQFPLTRSRAIQECRSPVPPPAADPPEARTKAPPGRKREPPAQAVRFL 641
Query: 118 ---------ESQETDLRRARQSPRNPRRARGSP 141
+ L + R P +R R P
Sbjct: 642 PWATPGLEGAAVPQTLEKNRAGPEAEKRLRRGP 674
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 24 NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTR 83
N STR P + R K R+++ + + G T+ R + + STR
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 84 ESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGN 143
T + + G+S S + + S+ S+ + + SP +P R R
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP-SPSRRRHDNRR 135
Query: 144 RPAQSTREPRKPTNAEHARAPETDP 168
R ++ P++ R+P P
Sbjct: 136 RSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 24 NQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMREPRTPAQSTR 83
N STR P + R K R+++ + + G T+ R + + STR
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 84 ESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARGSPGN 143
T + + G+S S + + S+ S+ + + SP +P R R
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP-SPSRRRHDNRR 135
Query: 144 RPAQSTREPRKPTNAEHARAPETDP 168
R ++ P++ R+P P
Sbjct: 136 RSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.5 bits (101), Expect = 1e-04
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 11 SPGNPRRARESPGNQPTQSTRE-----PRTPAQSTRESWKPTHRARESPGNPRRARESPG 65
+P P+ + +P +T + P+ PA +T + PT +P P+ +
Sbjct: 271 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP 330
Query: 66 NQPTQSMRE-------------PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRP 112
+P + +E P+ PA +T + PT ++ AP T + + +P P
Sbjct: 331 KEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP-APTTTKEPSPTTP-KEP 388
Query: 113 TQSTRESQETDLRR-----ARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETD 167
+T +S T + + +P P+ + PA +T P++P + T
Sbjct: 389 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT--PKEPAPTTPKKPAPTT 446
Query: 168 PHE 170
P E
Sbjct: 447 PKE 449
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
+P P++ + +P +T P+ PA +T + PT +P P+ + + T
Sbjct: 435 APTTPKKPAPTTPKEPAPTT--PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTP 492
Query: 71 SMRE------PRTPAQSTRESWKPTHAEQ---------------ARAPETDQRGASESPG 109
+ E P PA +T E PT E+ A AP T + A +P
Sbjct: 493 TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 552
Query: 110 NRPTQSTRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
+ +E T + +P P+ + PA +T P+KP E A +P
Sbjct: 553 EPAPTTPKEPAPTTPKET--APTTPKGTAPTTLKEPAPTT--PKKPAPKELAPTTTKEP 607
Score = 42.7 bits (99), Expect = 2e-04
Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQ 70
+P P+ A + +P +T P+ PA +T + PT +P P+ + +P
Sbjct: 531 APTTPKAAAPNTPKEPAPTT--PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPA- 587
Query: 71 SMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQS 130
P TP + + PT ++ + D+ + G PT + T A
Sbjct: 588 ----PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPA--- 640
Query: 131 PRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDP 168
P P+ + PA +T P+KP E A P
Sbjct: 641 PTTPKGTAPTTLKEPAPTT--PKKPAPKELAPTTTKGP 676
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 26 PTQSTREPRTP-AQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMRE-----PRTPA 79
PT TP A++T + T +P P+ + +PT + + P+ PA
Sbjct: 189 PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA 248
Query: 80 QSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNPRRARG 139
+T +S T E A P T + A +P +T+E T + A +P+ P A
Sbjct: 249 PTTTKSAPTTPKEPA--PTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP--APT 304
Query: 140 SPGNRPAQSTREPRKPTNAEHARAPETDPHE 170
+P +PA +T P++P T P E
Sbjct: 305 TP-KKPAPTT--PKEPAPTTPKEPTPTTPKE 332
Score = 39.3 bits (90), Expect = 0.002
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 18/184 (9%)
Query: 11 SPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRR----------- 59
+P P+ + +P +T P+ PA +T + PT SP P+
Sbjct: 341 APTTPKEPAPTAPKKPAPTT--PKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 398
Query: 60 ARESPGNQPTQSM-REPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRE 118
+ P T+S P+ P+ +T + PT ++ AP T ++ A +P + +E
Sbjct: 399 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP-APTTPKKPAPTTPKEPAPTTPKE 457
Query: 119 SQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARAPETDPHEARGSHRFI 178
T + + +P P+ + A +T + PT E AP T A + +
Sbjct: 458 PAPTTTK--KPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL-APTTPEKPAPTTPEEL 514
Query: 179 PRTT 182
TT
Sbjct: 515 APTT 518
Score = 35.0 bits (79), Expect = 0.046
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 15 PRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRR-ARESPGNQPTQSMR 73
P+ + +PT +T + PA +T + PT +P P+ A +P +++
Sbjct: 596 PKELAPTTTKEPTSTTCDK--PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLK 653
Query: 74 EPR--TPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSP 131
EP TP + + P T +G + + ++P +T +ET +P
Sbjct: 654 EPAPTTPKKPAPKELAP----------TTTKGPTSTTSDKPAPTT--PKET-------AP 694
Query: 132 RNPRRARGSPGNRPAQSTREPRKPTNAE 159
P+ + +PA +T E PT +E
Sbjct: 695 TTPKEPAPTTPKKPAPTTPETPPPTTSE 722
Score = 33.5 bits (75), Expect = 0.13
Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 24/154 (15%)
Query: 15 PRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARESPGNQPTQSMRE 74
P+ + PT +T + PA +T + PT +P P++ PT
Sbjct: 665 PKELAPTTTKGPTSTTSDK--PAPTTPKETAPTTPKEPAPTTPKKP------APT----T 712
Query: 75 PRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQETDLRRARQSPRNP 134
P TP +T E PT ++ P T + ES + T ++ E SP+ P
Sbjct: 713 PETPPPTTSEVSTPTTTKE---PTTIHKSPDESTPELSAEPTPKALE-------NSPKEP 762
Query: 135 --RRARGSPGNRPAQSTREPRKPTNAEHARAPET 166
+ +P +T K T + PET
Sbjct: 763 GVPTTKTPAATKPEMTTTAKDKTTERDLRTTPET 796
Score = 29.6 bits (65), Expect = 1.9
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 19/193 (9%)
Query: 4 EEHRARESPGNPRRARESPGNQPTQSTREPRTPAQSTRESWKPTHRARESPGNPRRARES 63
+++R ++ P + G+ + TP ST + K + + + P R S
Sbjct: 70 KKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPS 129
Query: 64 -PGNQPTQSMREPRTPAQSTRESWKPTHAEQARAPETDQRGASESPGNRPTQSTRESQET 122
P N T ++T E+ + T + +T G ++ + TQS ++
Sbjct: 130 LPPNSDTSKETSLTVNKETTVETKETTTTNK----QTSTDGKEKTTSAKETQSIEKTSAK 185
Query: 123 DLRR-----ARQSPRNPRRARGSPGNRPAQST---------REPRKPTNAEHARAPETDP 168
DL A+ +P+ +G P + T P++PT AP T
Sbjct: 186 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 245
Query: 169 HEARGSHRFIPRT 181
A + + P T
Sbjct: 246 EPAPTTTKSAPTT 258
Score = 29.6 bits (65), Expect = 1.9
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 23/175 (13%)
Query: 15 PRRARESPGNQPTQSTREPRTPAQSTRESWKP----THRARESPGNPRRARESPGNQPTQ 70
P + E S +EP P T + KP T + + + + R E+ P
Sbjct: 744 PELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKM 803
Query: 71 SMREPRTPAQSTRESWKPTHAEQARAPETDQ---------RGASESPGNRPTQSTRESQE 121
+ +E T + T ES Q + T + + +P T+ T + E
Sbjct: 804 T-KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTE 862
Query: 122 TDLRRARQSPRNPRRARGSPGN--RPAQSTREPRKPTNAE------HARAPETDP 168
+ + ++ + RA S +P + T+ P+KPT+ + R P+T P
Sbjct: 863 I-MNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTP 916
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.122 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,973,023
Number of Sequences: 37866
Number of extensions: 627290
Number of successful extensions: 6772
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 937
Number of HSP's that attempted gapping in prelim test: 4141
Number of HSP's gapped (non-prelim): 2632
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.