Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239753692
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
sapiens]
(228 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo ... 464 e-131
gi|239748286 PREDICTED: hypothetical protein [Homo sapiens] 215 3e-56
gi|239742186 PREDICTED: hypothetical protein XP_002342447 [Homo ... 215 3e-56
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.024
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 35 0.053
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 35 0.069
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 35 0.069
gi|40068047 cyclin M3 isoform 2 [Homo sapiens] 35 0.069
gi|40068049 cyclin M3 isoform 1 [Homo sapiens] 35 0.069
gi|32483371 GTP-binding mitogen-induced T-cell protein [Homo sap... 34 0.12
gi|4885263 GTP-binding mitogen-induced T-cell protein [Homo sapi... 34 0.12
gi|33239445 eukaryotic translation initiation factor 3, subunit ... 33 0.15
gi|83367072 eukaryotic translation initiation factor 3, subunit ... 33 0.15
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 33 0.26
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 33 0.26
gi|239757743 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|169168434 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo ... 32 0.34
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|113417342 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo ... 32 0.34
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 32 0.34
gi|113416881 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 32 0.34
gi|153251792 hypothetical protein LOC54854 [Homo sapiens] 32 0.34
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 32 0.59
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] 31 0.77
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] 31 0.77
>gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
sapiens]
Length = 228
Score = 464 bits (1194), Expect = e-131
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MAEGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIG 60
MAEGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIG
Sbjct: 1 MAEGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIG 60
Query: 61 SAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVFQELLLLTGKPRAIRERSP 120
SAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVFQELLLLTGKPRAIRERSP
Sbjct: 61 SAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVFQELLLLTGKPRAIRERSP 120
Query: 121 LRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWV 180
LRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWV
Sbjct: 121 LRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWV 180
Query: 181 QQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 228
QQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE
Sbjct: 181 QQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 228
>gi|239748286 PREDICTED: hypothetical protein [Homo sapiens]
Length = 114
Score = 215 bits (547), Expect = 3e-56
Identities = 104/114 (91%), Positives = 106/114 (92%)
Query: 115 IRERSPLRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG 174
+R R+ SAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG
Sbjct: 1 MRSRTAKGEKRGSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG 60
Query: 175 GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 228
GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE
Sbjct: 61 GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 114
>gi|239742186 PREDICTED: hypothetical protein XP_002342447 [Homo
sapiens]
Length = 114
Score = 215 bits (547), Expect = 3e-56
Identities = 104/114 (91%), Positives = 106/114 (92%)
Query: 115 IRERSPLRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG 174
+R R+ SAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG
Sbjct: 1 MRSRTAKGEKRGSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRG 60
Query: 175 GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 228
GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE
Sbjct: 61 GERAWVQQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRSFGERPPPLE 114
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.024
Identities = 66/237 (27%), Positives = 85/237 (35%), Gaps = 34/237 (14%)
Query: 4 GSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASP----RHLPARI 59
G + S +P ++S A W + R +RRG PQ GW+ + R AR
Sbjct: 504 GHSRSRSPQWRRSRS-AQRWGRS--RSPQRRGR-SRSPQRPGWSRSRNTQRRGRSRSARR 559
Query: 60 GS------AQLGFTRALPP--------RVPARARSAPRALAPPHKLILTPVVLALVFQEL 105
G A G +R+ P R PAR RS R TP
Sbjct: 560 GRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSR- 618
Query: 106 LLLTGKPRAIRERSPLRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAI 165
T R R RSP+RR S SPA R R + PA + GR R P R +
Sbjct: 619 ---TPARRRSRTRSPVRRRSRS---RSPARRSGRSRSRTPARR--GRSRSRTPARRGRSR 670
Query: 166 EAFPDLPRGGERAWV---QQPSPSREQQKGGTRQNDLCFPKEVHSDDNLGRDEKGRS 219
P G R+ + S SR ++G +R L HS R G S
Sbjct: 671 SRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSS 727
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 35.0 bits (79), Expect = 0.053
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 11 PGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGSAQLGFTRAL 70
PGAP + G E G RR R + G P AA RA
Sbjct: 101 PGAPRARGSCGR--EPGPRRRRAPSSAGKRPAAAA----------------------RAA 136
Query: 71 PPRVPARARSAPRALAPPHKLILTPVVLALVFQELLLLTGKPRAIRERSPLRRLHYSAVP 130
PPR + AR PR++ + + P + + + R + + PL+ SA P
Sbjct: 137 PPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASP 196
Query: 131 ---ASPAIRQARRDALLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWVQQPSPSR 187
A+P + +R +L P + RR+ R P + L RGGE ++
Sbjct: 197 PRLAAP-LAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPR--SLSRGGEVVGARRRRGGE 253
Query: 188 EQQKGGTRQ 196
E++ G RQ
Sbjct: 254 ERRVRGRRQ 262
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.069
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 30 RARRRGTVGTEPQAAGW----------ALPASPRHLPARIGSAQLGFTRALPPRVPARAR 79
R RG VGT+P+ G A PASPR AR S Q + PP P+RAR
Sbjct: 101 RVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQ----SSPPPPPPSRAR 156
Query: 80 SAPRALAPP 88
S L+ P
Sbjct: 157 SRSLRLSAP 165
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.069
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 30 RARRRGTVGTEPQAAGW----------ALPASPRHLPARIGSAQLGFTRALPPRVPARAR 79
R RG VGT+P+ G A PASPR AR S Q + PP P+RAR
Sbjct: 101 RVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQ----SSPPPPPPSRAR 156
Query: 80 SAPRALAPP 88
S L+ P
Sbjct: 157 SRSLRLSAP 165
>gi|40068047 cyclin M3 isoform 2 [Homo sapiens]
Length = 659
Score = 34.7 bits (78), Expect = 0.069
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 50 ASPRHLPARIGSAQLGFT--RALPPRVPAR--ARSAPRALAPPHKLILTPVVLALVFQEL 105
A R +PA +GSA L F +P V R APRAL +L + +AL +L
Sbjct: 217 AGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQL 276
Query: 106 LLLTGKPRAIRER 118
L L +P +RER
Sbjct: 277 LELAARPGRLRER 289
>gi|40068049 cyclin M3 isoform 1 [Homo sapiens]
Length = 707
Score = 34.7 bits (78), Expect = 0.069
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 50 ASPRHLPARIGSAQLGFT--RALPPRVPAR--ARSAPRALAPPHKLILTPVVLALVFQEL 105
A R +PA +GSA L F +P V R APRAL +L + +AL +L
Sbjct: 217 AGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQL 276
Query: 106 LLLTGKPRAIRER 118
L L +P +RER
Sbjct: 277 LELAARPGRLRER 289
>gi|32483371 GTP-binding mitogen-induced T-cell protein [Homo
sapiens]
Length = 296
Score = 33.9 bits (76), Expect = 0.12
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 33 RRGTVGTEPQAAGWALPASPRHL 55
R+GTVG +PQ W++PA RHL
Sbjct: 9 RQGTVGMQPQQQRWSIPADGRHL 31
>gi|4885263 GTP-binding mitogen-induced T-cell protein [Homo
sapiens]
Length = 296
Score = 33.9 bits (76), Expect = 0.12
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 33 RRGTVGTEPQAAGWALPASPRHL 55
R+GTVG +PQ W++PA RHL
Sbjct: 9 RQGTVGMQPQQQRWSIPADGRHL 31
>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 33.5 bits (75), Expect = 0.15
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 2 AEGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGS 61
AEG PGAPE + E G+ A V TEP A A + P P+ +
Sbjct: 31 AEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEA-ASGPSESPSPPAA 89
Query: 62 AQLGFTRALPPRVPARARS 80
+L + A PP VPA+ +
Sbjct: 90 EELPGSHAEPP-VPAQGEA 107
>gi|83367072 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 33.5 bits (75), Expect = 0.15
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 2 AEGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGS 61
AEG PGAPE + E G+ A V TEP A A + P P+ +
Sbjct: 31 AEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEA-ASGPSESPSPPAA 89
Query: 62 AQLGFTRALPPRVPARARS 80
+L + A PP VPA+ +
Sbjct: 90 EELPGSHAEPP-VPAQGEA 107
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 32.7 bits (73), Expect = 0.26
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Query: 3 EGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGSA 62
E S P APE+ A+ + + RR E AAG A P S A G+
Sbjct: 68 EDPRSPAKPAAPEDPQMP---AQPALPQLPRRPRTLDEDGAAGEAGPVSKA---AAGGAP 121
Query: 63 QLGFTRALPPRVPARARSAPRALAPPHKLILTPVVL 98
+GF PP P ++AP L PP + PVVL
Sbjct: 122 HIGFVGEPPPYAPPDPKAAP-LLYPPFPQV--PVVL 154
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 32.7 bits (73), Expect = 0.26
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Query: 3 EGSNSSHTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGSA 62
E S P APE+ A+ + + RR E AAG A P S A G+
Sbjct: 68 EDPRSPAKPAAPEDPQMP---AQPALPQLPRRPRTLDEDGAAGEAGPVSKA---AAGGAP 121
Query: 63 QLGFTRALPPRVPARARSAPRALAPPHKLILTPVVL 98
+GF PP P ++AP L PP + PVVL
Sbjct: 122 HIGFVGEPPPYAPPDPKAAP-LLYPPFPQV--PVVL 154
>gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 32.3 bits (72), Expect = 0.34
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 9 HTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGW-ALPASPRHLPARIGSAQLGFT 67
H G N + E G R GT G+ + AGW P P HL Q+
Sbjct: 131 HDVGRTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHL-------QILER 183
Query: 68 RALPPRVPARARSAPR 83
R+ PPR+ RA+ R
Sbjct: 184 RSDPPRLAVRAQGRGR 199
>gi|169168434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 32.3 bits (72), Expect = 0.34
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 114 AIRERSPLRRLHYSAVPASPAIRQARRDALLPACKAV--GRRSGRWPLSRR 162
A RERSP R P +PA A P C AV G RSG WPLSRR
Sbjct: 117 ADRERSP-RTPGAGPWPPAPARPAA------PPCSAVRLGYRSGEWPLSRR 160
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.34
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 49 PASPRHLPARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVF 102
P PR P R + G+T A PP PA AP AL PP P L L F
Sbjct: 210 PPGPRR-PLRSPHSGSGWTPARPPSPPA---GAPEALRPPASTTRAPAPLTLSF 259
>gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo
sapiens]
Length = 217
Score = 32.3 bits (72), Expect = 0.34
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 9 HTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGW-ALPASPRHLPARIGSAQLGFT 67
H G N + E G R GT G+ + AGW P P HL Q+
Sbjct: 113 HDVGRTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHL-------QILER 165
Query: 68 RALPPRVPARARSAPR 83
R+ PPR+ RA+ R
Sbjct: 166 RSDPPRLAVRAQGRGR 181
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 32.3 bits (72), Expect = 0.34
Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 31/178 (17%)
Query: 26 TGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGSAQLGFTRALPPRVPARARSAPRAL 85
T R RRRGT P PA P H G A+ R PP P R+ P
Sbjct: 76 TQPHRRRRRGTRRLPPALT----PAGPYHSARPGGGARARAARVSPP-TPPRSGLDPAVP 130
Query: 86 APPHKLILTPVVLALVFQE---LLLLTGKPRAIRERSPLRRLHYSAVPASPAIRQARRDA 142
+P TP LA Q L L TG R PLRR A + +R
Sbjct: 131 SP------TPAPLARCRQTRAGLRLSTGG----RLSPPLRR---------AASGEWKRPG 171
Query: 143 LLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWVQQPSPSREQQKGGTRQNDLC 200
L + GR +G ++ R PRG R ++ P+R + + R D C
Sbjct: 172 GLTQGEFAGRGAGGARVTHRPGRLR----PRGRGRGRARRTCPARRRGEEDLRVQDSC 225
>gi|113417342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 32.3 bits (72), Expect = 0.34
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 114 AIRERSPLRRLHYSAVPASPAIRQARRDALLPACKAV--GRRSGRWPLSRR 162
A RERSP R P +PA A P C AV G RSG WPLSRR
Sbjct: 117 ADRERSP-RTPGAGPWPPAPARPAA------PPCSAVRLGYRSGEWPLSRR 160
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.34
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 49 PASPRHLPARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVF 102
P PR P R + G+T A PP PA AP AL PP P L L F
Sbjct: 210 PPGPRR-PLRSPHSGSGWTPARPPSPPA---GAPEALRPPASTTRAPAPLTLSF 259
>gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo
sapiens]
Length = 281
Score = 32.3 bits (72), Expect = 0.34
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 9 HTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGW-ALPASPRHLPARIGSAQLGFT 67
H G N + E G R GT G+ + AGW P P HL Q+
Sbjct: 177 HDVGRTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHL-------QILER 229
Query: 68 RALPPRVPARARSAPR 83
R+ PPR+ RA+ R
Sbjct: 230 RSDPPRLAVRAQGRGR 245
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 32.3 bits (72), Expect = 0.34
Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 31/178 (17%)
Query: 26 TGVRRARRRGTVGTEPQAAGWALPASPRHLPARIGSAQLGFTRALPPRVPARARSAPRAL 85
T R RRRGT P PA P H G A+ R PP P R+ P
Sbjct: 76 TQPHRRRRRGTRRLPPALT----PAGPYHSARPGGGARARAARVSPP-TPPRSGLDPAVP 130
Query: 86 APPHKLILTPVVLALVFQE---LLLLTGKPRAIRERSPLRRLHYSAVPASPAIRQARRDA 142
+P TP LA Q L L TG R PLRR A + +R
Sbjct: 131 SP------TPAPLARCRQTRAGLRLSTGG----RLSPPLRR---------AASGEWKRPG 171
Query: 143 LLPACKAVGRRSGRWPLSRRSAIEAFPDLPRGGERAWVQQPSPSREQQKGGTRQNDLC 200
L + GR +G ++ R PRG R ++ P+R + + R D C
Sbjct: 172 GLTQGEFAGRGAGGARVTHRPGRLR----PRGRGRGRARRTCPARRRGEEDLRVQDSC 225
>gi|113416881 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 32.3 bits (72), Expect = 0.34
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 114 AIRERSPLRRLHYSAVPASPAIRQARRDALLPACKAV--GRRSGRWPLSRR 162
A RERSP R P +PA A P C AV G RSG WPLSRR
Sbjct: 117 ADRERSP-RTPGAGPWPPAPARPAA------PPCSAVRLGYRSGEWPLSRR 160
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.34
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 49 PASPRHLPARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVF 102
P PR P R + G+T A PP PA AP AL PP P L L F
Sbjct: 210 PPGPRR-PLRSPHSGSGWTPARPPSPPA---GAPEALRPPASTTRAPAPLTLSF 259
>gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
Length = 478
Score = 32.3 bits (72), Expect = 0.34
Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 25/145 (17%)
Query: 43 AAGWALPASPRHLPARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILTPVVLALVF 102
AA LP +P P+ IG Q G + P RV R AP + PP P+ L
Sbjct: 286 AASCPLPPAPPQKPSVIGGLQRGRS---PHRVSRRRSVAPASPPPPDG----PLAHRLAA 338
Query: 103 QELLLLTGKPRAIRERSPLRRLHYSAVPASPAIRQARRDALLPACKAVGRRSGRWPLSRR 162
+ T P LR + + P+ P R +R W LSR
Sbjct: 339 CRVSPATPGPAL---SDILRSVQRARTPSGPPARPSR---------------SMWDLSRL 380
Query: 163 SAIEAFPDLPRGGERAWVQQPSPSR 187
S + D +++W + +P++
Sbjct: 381 SQLSGSSDGDNELKKSWGSKDTPAK 405
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 38 GTEPQAAGWALPASPRHLPARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILTPV- 96
G EP A G P + + ++ + T + P+ SAP L PP + TP
Sbjct: 805 GVEPVAQGIVSQQLPA-VSSLPSASSISVTSQVSSTGPSGMPSAPTNLVPPQNIAQTPAT 863
Query: 97 ----VLALVFQELLLLTGKPRAIRERSPLRRLHYSAVPASPAIRQARRDA 142
++ V Q L+ T + ++ PL +SA + AI DA
Sbjct: 864 QNGNLVQSVSQPPLIATNTNLPLAQQIPLSSTQFSAQSLAQAIGSQIEDA 913
>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
Length = 602
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 5 SNSSHTPGAPENKSFAGAWAETGVRRARRR-----------GTVGTEPQAAGWALPASPR 53
SN TPG P A +TG+ R GTVG P GW +P +
Sbjct: 207 SNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQ 266
Query: 54 HL-PARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILT 94
+ P G + + AL V A P + PPH + T
Sbjct: 267 PVYPITTGGFRHPYPTAL--TVNASMSRFPPHMVPPHHTLHT 306
>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
Length = 596
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 5 SNSSHTPGAPENKSFAGAWAETGVRRARRR-----------GTVGTEPQAAGWALPASPR 53
SN TPG P A +TG+ R GTVG P GW +P +
Sbjct: 184 SNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQ 243
Query: 54 HL-PARIGSAQLGFTRALPPRVPARARSAPRALAPPHKLILT 94
+ P G + + AL V A P + PPH + T
Sbjct: 244 PVYPITTGGFRHPYPTAL--TVNASMSRFPPHMVPPHHTLHT 283
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,107,743
Number of Sequences: 37866
Number of extensions: 580655
Number of successful extensions: 2192
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 2132
Number of HSP's gapped (non-prelim): 140
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.