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Search of human proteins with 239753329
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 701 0.0
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 336 2e-92
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 305 5e-83
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens] 294 9e-80
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 273 2e-73
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 257 1e-68
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 254 8e-68
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 245 4e-65
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 226 2e-59
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 127 1e-29
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 57 2e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 57 3e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 56 6e-08
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 55 9e-08
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 54 2e-07
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 52 1e-06
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 51 1e-06
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 51 2e-06
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 50 3e-06
gi|239753399 PREDICTED: hypothetical protein [Homo sapiens] 49 9e-06
gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo ... 49 9e-06
gi|4885381 histone cluster 1, H1b [Homo sapiens] 49 9e-06
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 49 9e-06
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 49 9e-06
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 48 1e-05
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 701 bits (1810), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL 60
MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL
Sbjct: 1 MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL 60
Query: 61 RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY 120
RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY
Sbjct: 61 RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY 120
Query: 121 QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR 180
QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR
Sbjct: 121 QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR 180
Query: 181 RRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQ 240
RRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQ
Sbjct: 181 RRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQ 240
Query: 241 KAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKA 300
KAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKA
Sbjct: 241 KAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKA 300
Query: 301 EAGQGQNRRNEVGGQHNLALLECDVIGKVQPKTKKDVSWLDSVQLRTQMLS 351
EAGQGQNRRNEVGGQHNLALLECDVIGKVQPKTKKDVSWLDSVQLRTQMLS
Sbjct: 301 EAGQGQNRRNEVGGQHNLALLECDVIGKVQPKTKKDVSWLDSVQLRTQMLS 351
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 336 bits (862), Expect = 2e-92
Identities = 205/351 (58%), Positives = 228/351 (64%), Gaps = 54/351 (15%)
Query: 1 MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL 60
MRGLDQM IR GPYLLLGE +GHSALGAQP QAA GDADELLELPALLQRPAGRGPCA+L
Sbjct: 1 MRGLDQMAIREGPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQRPAGRGPCASL 60
Query: 61 RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY 120
R +TPA ALLLLSH AQRRSM+A A+ SPGR RLGKEP RESWTRSAP RC
Sbjct: 61 RDSRVTPATALLLLSHCSRAQRRSMRAAAAQERSPGRRRLGKEPLIRESWTRSAPWRCLS 120
Query: 121 QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR 180
QDA RAGS+VC S PQ +RGGGGKK + QKA GAK +KP+
Sbjct: 121 QDAGRAGSQVCGSSPQ------------------TRGGGGKKLQRQKATVMGAKSRKKPQ 162
Query: 181 RRGERAAAAGGKKLQKAAAAKSRGGGGKKTA----AAGGKKPRRRRGQKAAKSRGGGDKK 236
G++AA AG AKS GGGGKK AA G+K R AAKSRGGG KK
Sbjct: 163 HWGQKAATAG---------AKSPGGGGKKPGQEKPAATGEKTR------AAKSRGGGGKK 207
Query: 237 LERQKAALTGVKS------RGDKKPLRGGKKQRERGQNT-----KSRGGGGEKPQKAAAA 285
R+K A G K+ G K GG+K R RGQ KSRGGGG KPQK AAA
Sbjct: 208 PRREKPAAAGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAGAKSRGGGGIKPQKPAAA 267
Query: 286 GAKSRGGRGEKPQKAEAGQGQNRRNEVGGQHNLALLECDVIGKVQPKTKKD 336
GAK GG+ KP++ +GQ+ N V GQ++LA LECDV GKVQ KT KD
Sbjct: 268 GAKIHGGK--KPRR----RGQSSGNGVEGQNSLAFLECDVEGKVQRKTNKD 312
Score = 67.0 bits (162), Expect = 2e-11
Identities = 56/148 (37%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 79 PAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNR 138
P Q + + RG GK+PRR + A Q A+ AG++ R
Sbjct: 183 PGQEKPAATGEKTRAAKSRGGGGKKPRREKPAAAGAKNP---QKAAAAGAKF-------R 232
Query: 139 GGGDKKPRRRGQKA----AKSRGGGGKKPRGQKAAGAGAKKH--RKPRRRGERAAAAGGK 192
G +KPR RGQKA AKSRGGGG KP QK A AGAK H +KPRRRG+ ++ G
Sbjct: 233 EAGGRKPRWRGQKATEAGAKSRGGGGIKP--QKPAAAGAKIHGGKKPRRRGQ--SSGNGV 288
Query: 193 KLQKAAAAKSRGGGGKKTAAAGGKKPRR 220
+ Q + A GK PRR
Sbjct: 289 EGQNSLAFLECDVEGKVQRKTNKDNPRR 316
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 305 bits (780), Expect = 5e-83
Identities = 204/374 (54%), Positives = 224/374 (59%), Gaps = 75/374 (20%)
Query: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
GPYLLLGE +GHSALGAQ Q A GDADELLELPALLQ P G PCA+LR +TPA AL
Sbjct: 19 GPYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHPTGCDPCASLRDSRVTPATAL 78
Query: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
LLLSH AQRRS+QA A+ S GRG LGKEP +ESWTRS PRRC QDA R+GSRVC
Sbjct: 79 LLLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRSDPRRCLSQDAVRSGSRVC 138
Query: 132 RSRPQNRGGGDKKPRRRGQKA----AKSRGGGGKKP--RGQKAAGAGAKKHRKPRRRGER 185
RSRPQ RGGG K+PRR QKA AKSRGG GKKP RGQKAA AGAK RG
Sbjct: 139 RSRPQTRGGGGKQPRR--QKAAVAGAKSRGGEGKKPQRRGQKAATAGAKS------RGGG 190
Query: 186 AAAAGGKKL---QKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKA 242
+ GGKK+ QK AA R GGGK+ RRRGQKA+KS GG + QKA
Sbjct: 191 VRSLGGKKMRRGQKGAAGAKRCGGGKQP---------RRRGQKASKS--GGVRCQTPQKA 239
Query: 243 ALTGVKSR---------------------------------GDKKPLRGGKKQRERGQNT 269
A GVKSR GDKKPLR K R RGQ
Sbjct: 240 AAQGVKSRKKLRQRGQKAAAAGQEAAAGKTCGGGGEKHRGGGDKKPLR--KNSRWRGQ-- 295
Query: 270 KSRGGGGEKPQKAAAAGAKSRG---------GRGEKPQKAEAGQGQNRRNEVGGQHNLAL 320
K+ GG+KPQKAAAAG + R R + P+K +GQN N V GQ +LA
Sbjct: 296 KAAAAGGKKPQKAAAAGGERRKKLRRQKAAVARAKSPKKPR-WRGQNSGNGVEGQRSLAF 354
Query: 321 LECDVIGKVQPKTK 334
LE DV GKVQ KTK
Sbjct: 355 LEFDVEGKVQRKTK 368
>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 294 bits (752), Expect = 9e-80
Identities = 170/267 (63%), Positives = 182/267 (68%), Gaps = 25/267 (9%)
Query: 1 MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL 60
MRG DQMEIRGGPYLLLGE VGHSALGAQP QAA GDADELLEL ALLQ AGRGPCATL
Sbjct: 1 MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL 60
Query: 61 RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY 120
ITPA ALLLLSH L AQ R MQAT A+AGSPG GRLGKEP RESWT SAPRRCP
Sbjct: 61 SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC 120
Query: 121 QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKA--AKSRGGGGKKPRGQKAAGAGAKK--- 175
QDASRAGS VCRSRPQ+RGGG +KPRR+ A AKS GGGGKKPR QK A AG K
Sbjct: 121 QDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE 180
Query: 176 ------HRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKS 229
+KPRR G++A AG KK QKA AAAG K PRRRR QKAAK+
Sbjct: 181 ESRRGGGKKPRRGGQKAVGAGAKKPQKA-------------AAAGTKTPRRRR-QKAAKA 226
Query: 230 RGGGDKKLERQKAALTGVKSRGDKKPL 256
G K + + S +P+
Sbjct: 227 AVWGQKAAAGESLTPNSLASVSFSRPM 253
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 273 bits (698), Expect = 2e-73
Identities = 166/311 (53%), Positives = 189/311 (60%), Gaps = 43/311 (13%)
Query: 13 PYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPALL 72
PYLLLGE +GHSALGAQP QAA GDADELLELPALLQ PAG PCA+LR +TPA ALL
Sbjct: 20 PYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCASLRDSRVTPATALL 79
Query: 73 LLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCR 132
LSH AQRRSM A A+ S GRG LGKEP RESWTRS PR C QDASR+GSRVCR
Sbjct: 80 PLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVCR 139
Query: 133 SRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGK 192
SRPQ RGGG KKPRR+ AA ++ GGKKPR + RKPRRRG+++ AAG K
Sbjct: 140 SRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPR----------RGRKPRRRGQKSTAAGAK 189
Query: 193 ---------KLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSR--GGGDKKLERQK 241
+ QK AAA ++ G G K + G+K R GQ+A GGG KK QK
Sbjct: 190 SRGEGGKKPRQQKPAAAGAKSGLGDKKSRRWGRKKPGRWGQEAVAGETCGGGGKK--PQK 247
Query: 242 AALTGVKSRGDKKPLR------------------GGKKQRERGQNTKSRGGGGEKPQKAA 283
AA G KS KKP R GG+ Q+ KS G GG+K ++
Sbjct: 248 AAAPGAKSH--KKPRRQWQKAAAEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQRRRG 305
Query: 284 AAGAKSRGGRG 294
KSRGGRG
Sbjct: 306 QRAPKSRGGRG 316
Score = 74.7 bits (182), Expect = 1e-13
Identities = 67/173 (38%), Positives = 78/173 (45%), Gaps = 51/173 (29%)
Query: 176 HR-KPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKS----- 229
HR + +RR AAAA + L + K T + PR Q A++S
Sbjct: 83 HRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRS----DPRHCISQDASRSGSRVC 138
Query: 230 ------RGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNT-----KSRGGGGEK 278
RGGG KK RQK A G KSRG KKP R G+K R RGQ + KSRG GG+K
Sbjct: 139 RSRPQTRGGGGKKPRRQKDAAAGAKSRGGKKP-RRGRKPRRRGQKSTAAGAKSRGEGGKK 197
Query: 279 P--QKAAAAGAKSR---------------------------GGRGEKPQKAEA 302
P QK AAAGAKS GG G+KPQKA A
Sbjct: 198 PRQQKPAAAGAKSGLGDKKSRRWGRKKPGRWGQEAVAGETCGGGGKKPQKAAA 250
Score = 43.1 bits (100), Expect = 4e-04
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 13/61 (21%)
Query: 258 GGKKQRERGQNTKSRGGGGEKP--QKAAAAGAKSRGG----RGEKP----QKAEAGQGQN 307
G + R R Q +RGGGG+KP QK AAAGAKSRGG RG KP QK+ A ++
Sbjct: 134 GSRVCRSRPQ---TRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTAAGAKS 190
Query: 308 R 308
R
Sbjct: 191 R 191
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 257 bits (657), Expect = 1e-68
Identities = 148/223 (66%), Positives = 161/223 (72%), Gaps = 28/223 (12%)
Query: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
GPYLLLGE VGHSALGAQP QAA DE+LELPALLQRPAGR PCA+ R ITPA AL
Sbjct: 16 GPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCASHRGRRITPATAL 71
Query: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
LLLSH A+RRSMQA AKAGSPGR R+GK P RESWTRSAP+RCP QDA RAGSRVC
Sbjct: 72 LLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVC 131
Query: 132 RSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGA-----KKHRKPRRRGERA 186
RSRPQ+RGG ++ AK RG GGK+PR QK A AGA K H+KPRRRG++A
Sbjct: 132 RSRPQSRGG-----QKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKA 186
Query: 187 AAA-----GGKKLQKAAA--AKSRGGGGKKTAAAGGKKPRRRR 222
A A GG K QKAAA AK+RGGG GGKKPRR R
Sbjct: 187 APAKNSGGGGNKPQKAAAAGAKNRGGG-------GGKKPRRGR 222
Score = 56.6 bits (135), Expect = 3e-08
Identities = 63/196 (32%), Positives = 82/196 (41%), Gaps = 50/196 (25%)
Query: 160 GKKP----RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGG 215
G++P RG++ A A R R ER + +AAAAK+ G G++ G
Sbjct: 53 GRRPCASHRGRRITPATALLLLSHRGRAERRS-------MQAAAAKA-GSPGRRRVGKG- 103
Query: 216 KKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGG 275
P R ++A R Q A G + + RGG+K G K RG G
Sbjct: 104 -PPSRESWTRSAPQR------CPSQDAGRAGSRVCRSRPQSRGGQKAAASG--AKRRGVG 154
Query: 276 GEKP--QKAAAAGAKSRGGR---------------------GEKPQKAEAGQGQNRRNEV 312
G++P QK AAAGAKSRGG+ G KPQKA A +NR
Sbjct: 155 GKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG 214
Query: 313 G-----GQHNLALLEC 323
G G+ L LL C
Sbjct: 215 GKKPRRGRRLLGLLPC 230
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 254 bits (649), Expect = 8e-68
Identities = 169/314 (53%), Positives = 188/314 (59%), Gaps = 46/314 (14%)
Query: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
G YLLLGE +GHSALGAQ Q A GDADELLELPALLQ AG PCA+LR +TPA AL
Sbjct: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
Query: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
LLLSH QRRSMQA A+ S GRG LGKEP + ES TRS PRRC QDASR+GSRVC
Sbjct: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
Query: 132 RSRPQNRGGGDKKP--------------------------RRRGQKA----AKSRGGGGK 161
RSRPQ RGGG KKP RRRGQKA AKS GGGGK
Sbjct: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGK 198
Query: 162 KPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRR 221
KP+ +A GA + +K RRRG++AAAAGG+K A K R G K G+K RR
Sbjct: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEK----AGKKLRQQGEK------GRKKPRR 248
Query: 222 RGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQK 281
RGQKAA + G KK RQKAA KS KKP R G +SR + QK
Sbjct: 249 RGQKAAAAGGERCKKPRRQKAAAVSAKS--PKKPRRRVLNSARLG--AESRKNPQRRGQK 304
Query: 282 AAAAGAKSRGGRGE 295
+ A AKSR G G+
Sbjct: 305 SMA--AKSRVGSGK 316
Score = 73.6 bits (179), Expect = 3e-13
Identities = 55/137 (40%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 180 RRRGERAAAAGGKKLQKAAAAK-------SRGGGGKKTAAAGGKKPRRRRGQKAAKSRGG 232
+RR +AAAA + L + K S G ++ + + R + ++RGG
Sbjct: 88 QRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGG 147
Query: 233 GDKKLER-QKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRG 291
G KK R QKAA G KSRG RGGKK R RGQ KAAAAGAKS G
Sbjct: 148 GGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQ-------------KAAAAGAKSCG 194
Query: 292 GRGEKPQKAEAGQGQNR 308
G G+KPQKA A + R
Sbjct: 195 GGGKKPQKARAVGARRR 211
Score = 73.2 bits (178), Expect = 3e-13
Identities = 66/180 (36%), Positives = 87/180 (48%), Gaps = 38/180 (21%)
Query: 146 RRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGG 205
RR Q AA G+ G++ + PRR + A+ G ++ ++ ++RGG
Sbjct: 89 RRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRP-QTRGG 147
Query: 206 GGKKTAAAGGKKPRRRRGQKAA----KSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKK 261
GGKK RRGQKAA KSRGG GV+SRG KK R G+K
Sbjct: 148 GGKKP----------RRGQKAATAGAKSRGG-------------GVRSRGGKKIRRRGQK 184
Query: 262 QRERGQNTKSRGGGGEKPQKAAAAGAKSRG-----GRGEKPQKA---EAGQGQNRRNEVG 313
G KS GGGG+KPQKA A GA+ RG RG+K A +AG+ ++ E G
Sbjct: 185 AAAAG--AKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKAGKKLRQQGEKG 242
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 245 bits (626), Expect = 4e-65
Identities = 155/253 (61%), Positives = 165/253 (65%), Gaps = 35/253 (13%)
Query: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
GPYLLLGE +GHSALGAQP QAA GDADELLELPALLQ PAG PCA+LR +TPA AL
Sbjct: 19 GPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCASLRDSRVTPATAL 78
Query: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
L LSH AQRRSM A A+ S GRG LGKEP RESWTRS PR C QDASR+GSRVC
Sbjct: 79 LPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVC 138
Query: 132 RSRPQNRGGGDKKPRRRGQKAA--KSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAA 189
RSRPQ RG G KK R+RG+KAA K+ G KKP QKAA GAK RG R
Sbjct: 139 RSRPQTRGSGGKKLRQRGEKAAAVKTCSGRSKKPGRQKAAVMGAKS------RGGR---- 188
Query: 190 GGKKLQKAAA--AKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGV 247
GKK QKAAA AKS GGGKK GKKP RR QKAA+TG
Sbjct: 189 -GKKPQKAAAAGAKSCNGGGKK-LGRWGKKPGRR-----------------GQKAAVTGA 229
Query: 248 KSRGDKKPLRGGK 260
KSR KKP R G+
Sbjct: 230 KSR--KKPQRRGQ 240
Score = 55.5 bits (132), Expect = 7e-08
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 192 KKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRG--GGDKKLERQKAALTGVKS 249
++ AAAA+ R G GK+P R + R D + + ++
Sbjct: 89 RRSMHAAAAQERSLG----RGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVCRSRPQT 144
Query: 250 RGDKKPLRGGKKQRERGQNT---KSRGGGGEKP--QKAAAAGAKSRGGRGEKPQKAEA 302
RG GGKK R+RG+ K+ G +KP QKAA GAKSRGGRG+KPQKA A
Sbjct: 145 RGS-----GGKKLRQRGEKAAAVKTCSGRSKKPGRQKAAVMGAKSRGGRGKKPQKAAA 197
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 226 bits (576), Expect = 2e-59
Identities = 141/224 (62%), Positives = 150/224 (66%), Gaps = 30/224 (13%)
Query: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
G YLLLGE +GHSALGAQ Q A GDADELLELPALLQ AG PCA+LR +TPA AL
Sbjct: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
Query: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
LLLSH QRRSMQA A+ S GRG LGKEP + ES TRS PRRC QDASR+GSRVC
Sbjct: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
Query: 132 RSRPQNRGGGDKKPRRRGQKA----AKSRGG-----GGKK--PRGQKAAGAGAKKHRKPR 180
RSRPQ RGGG KKP RRGQKA AKSRGG GGKK RGQKAA AGAK
Sbjct: 139 RSRPQTRGGGGKKP-RRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAK------ 191
Query: 181 RRGERAAAAGGKKLQKAAAAKSRGGG-------GKKTAAAGGKK 217
+ GGKK QKA A +R G GKK AAAGG+K
Sbjct: 192 -----SCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEK 230
Score = 77.0 bits (188), Expect = 2e-14
Identities = 56/142 (39%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 180 RRRGERAAAAGGKKLQKAAAAK-------SRGGGGKKTAAAGGKKPRRRRGQKAAKSRGG 232
+RR +AAAA + L + K S G ++ + + R + ++RGG
Sbjct: 88 QRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGG 147
Query: 233 GDKKLER-QKAALTGVKSRGDKKPLRGGKKQRERGQNT-----KSRGGGGEKPQKAAAAG 286
G KK R QKAA G KSRG RGGKK R RGQ KS GGGG+KPQKA A G
Sbjct: 148 GGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVG 207
Query: 287 AKSRGGR--GEKPQKAEAGQGQ 306
A+ RG + + +KA A G+
Sbjct: 208 ARRRGWKKLRRRGKKAAAAGGE 229
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 127 bits (320), Expect = 1e-29
Identities = 107/264 (40%), Positives = 136/264 (51%), Gaps = 52/264 (19%)
Query: 83 RSMQATVAKAGSPGRG-RLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGG 141
R +A+ A A S G G + G +R R PR +Q+ R + ++P RGGG
Sbjct: 369 RRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPR---WQNPRRRAQKAPAAKP--RGGG 423
Query: 142 DKKPRRRGQKAAKSRG-----GGGKKPR------GQKAAGAGAKKHRKPRRRGERAAAAG 190
KKPRRRG KAAKSRG GGGKKPR QKAA AGA+ ++ ++A+AAG
Sbjct: 424 SKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAG 483
Query: 191 ------------GKKLQKAAAAKSRGGGGKKTAAA----GGKKPRRRRGQKA-AKSRGGG 233
GK L + K+ G K TAA G K+PRR++ A AKSR GG
Sbjct: 484 TKSRGGGLKSHSGKNLWR-RGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGG 542
Query: 234 DKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQK--AAAAGAKSRG 291
K +RQKA G S G GG KQ SRGGGG KP++ AA AK+RG
Sbjct: 543 SKSRQRQKAVAAGATSHGG-----GGNKQ--------SRGGGGNKPRQWGQTAAAAKTRG 589
Query: 292 GRGEKP--QKAEAGQGQNRRNEVG 313
G ++P QKA AG ++R + G
Sbjct: 590 GGDKQPGWQKAAAGVTKSRSGDGG 613
Score = 124 bits (312), Expect = 1e-28
Identities = 115/309 (37%), Positives = 146/309 (47%), Gaps = 80/309 (25%)
Query: 90 AKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRG 149
A AG+ G G++PRRR Q A+ GS+ R R Q K R G
Sbjct: 109 AAAGTKSLGGRGRKPRRRG------------QKAAATGSKKPRWRAQKSAAAGSKNRGAG 156
Query: 150 -QKAAKSRG---GGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAA----AK 201
QKAA + G GG+KP+ AAGA ++ +KPRRRG ++ KK ++ A K
Sbjct: 157 AQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGK 216
Query: 202 SRGG------------GGKKTAAAGGKKPR--RRRGQKAA--------KSRGGGDKKLER 239
+RGG GG K+ GGKKP+ RRRGQKAA KSRGGGDKKL R
Sbjct: 217 TRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRR 276
Query: 240 Q--KAALTGVKSRG----DKKPL--------------------RGGKKQRERGQN-TKS- 271
Q AAL G K RG +KP RGGKK R RGQ TK+
Sbjct: 277 QGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAA 336
Query: 272 -----RGGGGEKPQKAAAAGAKSRGG---RGEKPQKAEAGQGQNRRNEVGGQHNLALLEC 323
RGGGG+ QKAA G KSR RG+KP++ +A + G + L +
Sbjct: 337 AAGTKRGGGGQ--QKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKR 394
Query: 324 DVIGKVQPK 332
G+ +P+
Sbjct: 395 RGDGRKKPR 403
Score = 121 bits (303), Expect = 1e-27
Identities = 109/295 (36%), Positives = 139/295 (47%), Gaps = 87/295 (29%)
Query: 92 AGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQK 151
A + + R GK+PRRR + +R + + R +SR GG +K RR +
Sbjct: 178 AAAGAKSRSGKKPRRRGAKSRG-------DEDKKGRQREAKSRFGKTRGGRRKKHRRPKP 230
Query: 152 AA---KSRGGGGKKP-----RGQKAAGAGAKK--------HRKPRRRGERAAAAGGKKLQ 195
AA KSR GGGKKP RGQKAA G + +K RR+G+ AA AG K+
Sbjct: 231 AAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRG 290
Query: 196 KAAA-----AKSRGGGGKKTAAA-------GGKKPRRRRGQKAAKS------RGGG---- 233
A A AK RGG G K+ GGKKPRRR GQKA K+ RGGG
Sbjct: 291 AATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRR-GQKATKAAAAGTKRGGGGQQK 349
Query: 234 ---------------DKKLERQKAALTGVKSR--GDKKPL-----RGGKKQRERGQN--- 268
KK RQKA+ G KSR GDKK L RG +++ R QN
Sbjct: 350 AAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRR 409
Query: 269 -------TKSRGGGGEKPQKAAAAGAKSRGGR-----GEKPQKAEAGQGQNRRNE 311
K RGGG +KP++ AKSRGG+ G+KP++ +GQ R +
Sbjct: 410 RAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRR----RGQKARQK 460
Score = 119 bits (297), Expect = 5e-27
Identities = 95/245 (38%), Positives = 126/245 (51%), Gaps = 43/245 (17%)
Query: 113 SAPRRCPYQDASRAGSRVCRS-----RPQNRGGGDKKPRRRGQKAA-----------KSR 156
+A P A+ AG ++ S R Q G KK R RGQK A K+
Sbjct: 34 AAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAA 93
Query: 157 GGGGKKPRG---QKAAGAGAK----KHRKPRRRGERAAAAGGKK----LQKAAAA--KSR 203
G GG + RG QKAA AG K + RKPRRRG++AAA G KK QK+AAA K+R
Sbjct: 94 GAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNR 153
Query: 204 GGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQR 263
G G +K AAA G K + G+K K+ G K +K G KSRGD+ + G+++
Sbjct: 154 GAGAQKAAAAAGVKSQG--GEKPQKAAAAGAKSRSGKKPRRRGAKSRGDED--KKGRQRE 209
Query: 264 ERGQNTKSRGGGGEKPQ--KAAAAGAKSRGGRGEKPQK--------AEAGQGQNRRNEVG 313
+ + K+RGG +K + K AA GAKSR G G+KPQK A G+ + ++ G
Sbjct: 210 AKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGG 269
Query: 314 GQHNL 318
G L
Sbjct: 270 GDKKL 274
Score = 117 bits (293), Expect = 2e-26
Identities = 115/310 (37%), Positives = 136/310 (43%), Gaps = 91/310 (29%)
Query: 81 QRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRP--QNR 138
QRR Q KA + G+ R+GK + R + A R G+ +P + R
Sbjct: 248 QRRRGQ----KAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGR 303
Query: 139 GG---------------GDKKPRRRGQKAAKSRGGGGKKPRG--QKAAGAGAKKHRKPRR 181
GG G KKPRRRGQKA K+ G K+ G QKAA G K +K RR
Sbjct: 304 GGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRR 363
Query: 182 RGERAAAAGGKKLQKAAAAKSRGGGGKK------TAAAGGKKPR----RRRGQKA--AKS 229
RG++ ++ AA AKSRGGG KK G KKPR RRR QKA AK
Sbjct: 364 RGKKPR----RQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKP 419
Query: 230 RGGGDKKLERQ--KAALTGVKSRGDKKPLRGGKKQRERGQN------------------- 268
RGGG KK R+ KAA KSRG K GGKK R RGQ
Sbjct: 420 RGGGSKKPRRRGPKAA----KSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQG 475
Query: 269 --------TKSRGGG---------GEKPQKAA-------AAGAKSRGGRGEKPQKAEAGQ 304
TKSRGGG + QKA AAGAKSRG + + QK
Sbjct: 476 RQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAG 535
Query: 305 GQNRRNEVGG 314
++R VGG
Sbjct: 536 AKSR---VGG 542
Score = 113 bits (283), Expect = 2e-25
Identities = 125/322 (38%), Positives = 138/322 (42%), Gaps = 110/322 (34%)
Query: 82 RRSMQATVA-----KAGSPGRGRLGKEPRRRESWTRSAPRRC------PYQDASRAG--S 128
RR +A A AG+ RGR K+PRR++ A R Q A AG S
Sbjct: 501 RRGQKAEAAGEKATAAGAKSRGR--KQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATS 558
Query: 129 RVCRSRPQNRGGGDKKPRRRGQKAA--KSRGGG---------------------GKKPRG 165
Q+RGGG KPR+ GQ AA K+RGGG GKK
Sbjct: 559 HGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWR 618
Query: 166 QKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGK-----KTAAAGG----- 215
QKAAG GAK +KP RRG++ AAA K A A SRG GGK K AAAG
Sbjct: 619 QKAAGTGAKSRKKPWRRGQKDAAAAEKAW--ATGATSRGSGGKQPRWQKPAAAGSESSAA 676
Query: 216 ----------KKPRRRR-------GQKAA----------------KSRGGGDKKLERQKA 242
KKPRRRR GQ AA KSRGGG K
Sbjct: 677 AAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGG 736
Query: 243 ALT----GVKSRGDKKPLR-----GGKKQRERGQNTKSRGG------GGEKPQKAAAAG- 286
A + G KSR KK GG +R RG KSR G GG QKAAAAG
Sbjct: 737 AKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGG---QKAAAAGG 793
Query: 287 -----AKSRGGRGEKPQKAEAG 303
KSRGGRG QKA AG
Sbjct: 794 KKPPRVKSRGGRG---QKAAAG 812
Score = 107 bits (267), Expect = 2e-23
Identities = 120/315 (38%), Positives = 147/315 (46%), Gaps = 73/315 (23%)
Query: 61 RSHPITPAPALLLLSH-SLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCP 119
R+ P P A L + L A+ + + A AG G K+ RR+++ R
Sbjct: 15 RAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLR 74
Query: 120 YQDASRAGSRVCR--------SRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGA 171
Q + AG + +NRGGG++K G KS GG G+KPR
Sbjct: 75 GQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAG---TKSLGGRGRKPR-----RR 126
Query: 172 GAKK----HRKPRRRGERAAAAGGKK----LQKAAAA---KSRGG-GGKKTAAAG----- 214
G K +KPR R +++AAAG K QKAAAA KS+GG +K AAAG
Sbjct: 127 GQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRS 186
Query: 215 GKKPRRR----RG-------QKAAKS-----RGGGDKKLERQKAALTGVKSR--GDKKPL 256
GKKPRRR RG Q+ AKS RGG KK R K A G KSR G KKP
Sbjct: 187 GKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKP- 245
Query: 257 RGGKKQRERGQNT---------KSRGGGGEK----PQKAAAAGAKSRGG--RGEKPQKAE 301
+KQR RGQ KSRGGG +K Q AA AGAK RG GEKP A
Sbjct: 246 ---QKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKP--AA 300
Query: 302 AGQGQNRRNEVGGQH 316
G+G +GGQ+
Sbjct: 301 KGRGGRGPKSLGGQN 315
Score = 75.9 bits (185), Expect = 5e-14
Identities = 72/167 (43%), Positives = 85/167 (50%), Gaps = 37/167 (22%)
Query: 79 PAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTR------SAPRRCPYQDASRAGSRVCR 132
PA S + A G R K+PRRR + +R +A P+Q R G +
Sbjct: 666 PAAAGSESSAAAAVGQEAEAR--KKPRRRRAKSRGDGGQNAAVGINPWQ---RRGKKPRL 720
Query: 133 SRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPR-GQKAA------GAGAKKHR---KPRRR 182
+ +RGGG K RG AKSRG GG K R G+KAA G GAK+ R R
Sbjct: 721 GK--SRGGGGAK--SRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRS 776
Query: 183 GERAAAAGGKKLQKAAAA--------KSRGGGGKKTAAAGGKKPRRR 221
GE+A AGG QKAAAA KSRGG G+K AAAGGKKP RR
Sbjct: 777 GEKAVTAGG---QKAAAAGGKKPPRVKSRGGRGQK-AAAGGKKPLRR 819
Score = 73.6 bits (179), Expect = 3e-13
Identities = 71/198 (35%), Positives = 96/198 (48%), Gaps = 39/198 (19%)
Query: 75 SHSLPAQRRSMQATVAK----AGSPGRGRLGKEPRRRE---SWTRSAPRRCPYQDASRAG 127
S P +R A A+ G+ RG GK+PR ++ + + S+ Q+A A
Sbjct: 628 SRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE-AR 686
Query: 128 SRVCRSRPQNRGGGDKKP-------RRRGQKA--AKSRGGGGKKPRGQ---KAAGAGAKK 175
+ R R ++RG G + +RRG+K KSRGGGG K RG K+ G+G K
Sbjct: 687 KKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAK 746
Query: 176 HRKPRRRGERAAAA-----GGKKLQKAAAAKSRGG-------GGKKTAAAGGKKPRR--R 221
R G++AAA+ GG K ++ AKSR G G K AAAGGKKP R
Sbjct: 747 SRS----GKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKA-AAAGGKKPPRVKS 801
Query: 222 RGQKAAKSRGGGDKKLER 239
RG + K+ GG K L R
Sbjct: 802 RGGRGQKAAAGGKKPLRR 819
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 57.4 bits (137), Expect = 2e-08
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 76 HSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRV-CRSR 134
HS ++ RS + + + S R R G R + S +RS R ++ SR+ S+ RSR
Sbjct: 200 HSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSK-SRSRSQSRSRSKKEKSRSPSKEKSRSR 258
Query: 135 PQNRGGGDKKPRRRGQKAAKSRGGGGK----KPRGQKAAGAGAKKHRKPR----RRGERA 186
+ G K + + ++ ++ GK P K+ + ++ R +RG +
Sbjct: 259 SHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVS 318
Query: 187 AAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR-----RRRGQKAAKSRGGGDKKLERQK 241
+K + + ++SR GG ++ + K + R+R ++ ++SR K ER
Sbjct: 319 RGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERS- 377
Query: 242 AALTGVKSRGDKKPLRGGKKQRERGQNT-----KSRGGGGEKPQKAAAAGAKSRGGRGEK 296
+ RG K+ + G ++++ ++T +S K ++ A + + R GRGE
Sbjct: 378 ------RKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGE- 430
Query: 297 PQKAEAGQGQNRRN 310
AG Q R+
Sbjct: 431 --SENAGTNQETRS 442
Score = 56.6 bits (135), Expect = 3e-08
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 21/253 (8%)
Query: 81 QRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRV---CRSRPQN 137
+RRS + + + S R R ++ R R ++S+ + + SR+GSR RSR Q+
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKS--RSRSRSGSRSRSKSRSRSQS 238
Query: 138 RGGGDK---------KPRRRGQKAAKSRGGGGKKPRG--QKAAGAGAKKHRKPRRRGERA 186
R K K R R A KSR + Q G K R P R ++
Sbjct: 239 RSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKS 298
Query: 187 AAAGGKKLQKAAAAK----SRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKA 242
+ + ++ K SRG +K+ + R + G ++ +SR K +R+
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRS-RSRSRSKSKDKRKGR 357
Query: 243 ALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEA 302
+ +SR + ++ R+RG S+ G +K +K ++SR ++ E
Sbjct: 358 KRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREH 417
Query: 303 GQGQNRRNEVGGQ 315
+ ++ + E G+
Sbjct: 418 AKSESSQREGRGE 430
Score = 51.2 bits (121), Expect = 1e-06
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 32/231 (13%)
Query: 105 RRRESWTRSAPRRCPYQDASRAG-SRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKP 163
RRR S++RS R + SR+ SR RSR + K R R + ++SR +
Sbjct: 180 RRRRSYSRS---RSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSR--SKSRS 234
Query: 164 RGQKAAGAGAKKHRKPRRRGERAAA-AGGKKLQKA--------------AAAKSRGGGGK 208
R Q + + +K R P + R+ + + GK K+ KSR
Sbjct: 235 RSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRH 294
Query: 209 KTAAAGGKKPRRRR---GQKAAKSRGGGDKKLERQKAALTGVK--------SRGDKKPLR 257
K+ + + + RR ++ + SRG +K RQ + + K SR K R
Sbjct: 295 KSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKR 354
Query: 258 GGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
G+K+ ++SR + + + S+ G +K +K + + Q+R
Sbjct: 355 KGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSR 405
Score = 48.9 bits (115), Expect = 7e-06
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 94 SPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAA 153
S + R + RR E R + R Q+ S R RSR +++GG R R + +
Sbjct: 296 SKSKSRSRSQERRVEEEKRGSVSRGRSQEKSL---RQSRSRSRSKGGS----RSRSRSRS 348
Query: 154 KSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAA 213
KS+ K +G+K + ++ + R + ER+ G K+ KA ++K +
Sbjct: 349 KSK----DKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKK---------- 394
Query: 214 GGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ-NTKSR 272
KK R Q + SR K+ E K+ + + RG+ + ++ R R + N+KS+
Sbjct: 395 --KKEDTDRSQSRSPSR-SVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSK 451
Query: 273 GGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
+ + + + +K+R + + A ++R
Sbjct: 452 PNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSR 487
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 26/179 (14%)
Query: 125 RAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGE 184
+ GSR RS ++R + R R + ++SR G K H K R R
Sbjct: 176 KPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSK------------SSHSKSRSRSR 223
Query: 185 RAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAAL 244
+ + K + ++SR K+ + + K+ R R A KSR + E +
Sbjct: 224 SGSRSRSKSRSR---SQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNN 280
Query: 245 TGVKSRGDKKPLRGGKKQRERGQNTK-----------SRGGGGEKPQKAAAAGAKSRGG 292
V + P R K + R ++ + SRG EK + + + ++S+GG
Sbjct: 281 DNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGG 339
Score = 43.5 bits (101), Expect = 3e-04
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 91 KAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQ 150
K GS RGR +E R+S +RS S+ GSR RSR +++ +K R+R +
Sbjct: 313 KRGSVSRGR-SQEKSLRQSRSRSR---------SKGGSR-SRSRSRSKSKDKRKGRKRSR 361
Query: 151 KAAKSRGGGGKKPRGQKAAG------AGAKKHRKP----RRRGERAAAAGGKKLQKAAAA 200
+ ++SR K + G AG+ K +K R + + + K+ + A +
Sbjct: 362 EESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSE 421
Query: 201 KSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGK 260
S+ G ++ AG + R R + +KS+ + + + + +SR + +
Sbjct: 422 SSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASR 481
Query: 261 KQRERGQNTKSR 272
+ SR
Sbjct: 482 SPSRSRSRSHSR 493
Score = 35.0 bits (79), Expect = 0.10
Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Query: 160 GKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR 219
G + G+K K + RR R+ + + + + KSR G ++ + R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 220 RRRGQKA-AKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK 278
R G ++ +KSR + +K KSR K + +KS+ EK
Sbjct: 222 SRSGSRSRSKSRSRSQSRSRSKKE-----KSRSPSKEKSRSRSHSAGKSRSKSKDQAEEK 276
Query: 279 PQKAAAAG-AKSRGGRGEKPQKAEAGQGQNRRNE 311
Q G KSR K + + Q RR E
Sbjct: 277 IQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVE 310
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 19/182 (10%)
Query: 149 GQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGK 208
G+K G + R + + R R ++ + G + ++SR G
Sbjct: 167 GRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGS 226
Query: 209 KTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLR----------G 258
++ + + + R K KSR +K R ++ G KSR K G
Sbjct: 227 RSRSKSRSRSQSRSRSKKEKSRSPSKEK-SRSRSHSAG-KSRSKSKDQAEEKIQNNDNVG 284
Query: 259 GKKQRERGQN---TKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQ 315
K R ++ +KSR E+ + G+ SRG EK + Q ++R GG
Sbjct: 285 KPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLR----QSRSRSRSKGGS 340
Query: 316 HN 317
+
Sbjct: 341 RS 342
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 56.6 bits (135), Expect = 3e-08
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 39/282 (13%)
Query: 30 PVQAAEGDADELLELPALLQRPAGRGPCATLRS-HPITPAPALLLLSHSLPAQRRSMQAT 88
P ++ G + E+ + P R A R + S P PAP +LP + RS
Sbjct: 1593 PRRSRSGSSPEVKDKP----RAAPRAQSGSDSSPEPKAPAP------RALPRRSRS---- 1638
Query: 89 VAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRR 148
GS +GR G P S T S+P P +R GSR S P+ + PRRR
Sbjct: 1639 ----GSSSKGR-GPSPEGSSS-TESSPEHPPKSRTARRGSR---SSPEPKTKSRTPPRRR 1689
Query: 149 GQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGK 208
+++ + R ++A + + + R R+ + + A KSR +
Sbjct: 1690 SSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPE----PAEKSRSSRRR 1745
Query: 209 KTAAAGGKKPRRRRGQKAA-KSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ 267
++A++ K RRG+ + K RG L+R ++ K+R ++ R G Q +
Sbjct: 1746 RSASSPRTKTTSRRGRSPSPKPRG-----LQRSRSRSRREKTRTTRRRDRSGSSQSTSRR 1800
Query: 268 NTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRR 309
+SR ++ +G SR P + E+ + +RR
Sbjct: 1801 RQRSRSRSRVTRRRRGGSGYHSR-----SPARQESSRTSSRR 1837
Score = 55.8 bits (133), Expect = 6e-08
Identities = 55/254 (21%), Positives = 93/254 (36%), Gaps = 24/254 (9%)
Query: 75 SHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSR 134
SHS RR ++ GR R +R S +RS P SR+ R RSR
Sbjct: 472 SHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRS-----PQWRRSRSAQRWGRSR 526
Query: 135 PQNRGGGDKKPRRRG-------QKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAA 187
R G + P+R G Q+ +SR + + A G + R P RRG +
Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRS 586
Query: 188 AAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGV 247
++ ++ R + A G R R + A+ R + R+ + +
Sbjct: 587 RTPARRRSRSRTPTRRRSRSRTPARRG-----RSRSRTPARRRSRTRSPVRRRSRSRSPA 641
Query: 248 KSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQN 307
+ G + ++ R R + RG ++ + R GR A G+ ++
Sbjct: 642 RRSGRSRSRTPARRGRSRSRTPARRG-------RSRSRTPARRSGRSRSRTPARRGRSRS 694
Query: 308 RRNEVGGQHNLALL 321
R G + +L+
Sbjct: 695 RTPRRGRSRSRSLV 708
Score = 50.4 bits (119), Expect = 2e-06
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 18/264 (6%)
Query: 50 RPAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRES 109
R A RG RSH +PA S + + RS T A+ S R P RR S
Sbjct: 555 RSARRG-----RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSR-----TPTRRRS 604
Query: 110 WTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAA 169
+R+ RR + + A R P R + P RR ++ + R + A
Sbjct: 605 RSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPA 664
Query: 170 GAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKS 229
G + R P RR R+ + + ++ + R G + + + R Q+ +S
Sbjct: 665 RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRS 724
Query: 230 RGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKS 289
++K K+ + +SR + P + ++ R + +SR + KA + +
Sbjct: 725 GSSSERK---NKSRTSQRRSRSNSSP----EMKKSRISSRRSRSLSSPR-SKAKSRLSLR 776
Query: 290 RGGRGEKPQKAEAGQGQNRRNEVG 313
R G P + Q RR+ G
Sbjct: 777 RSLSGSSPCPKQKSQTPPRRSRSG 800
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/221 (22%), Positives = 80/221 (36%), Gaps = 16/221 (7%)
Query: 94 SPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAA 153
SPG + + P R S S+P R SR S N + R G +++
Sbjct: 1463 SPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESS 1522
Query: 154 KSRGGGGKKPRGQKAAGAGA-----KKHRKPRRRGERAAAAGGK-KLQKAAAAKSRGGGG 207
+ + P GQ++ + K P+ R E ++ K K + +SR G
Sbjct: 1523 VDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSS 1582
Query: 208 KKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ 267
+ + PRR SR G +++ + A +S D P K R
Sbjct: 1583 PEVDSKSRLSPRR--------SRSGSSPEVKDKPRAAPRAQSGSDSSP--EPKAPAPRAL 1632
Query: 268 NTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
+SR G K + + G+ S E P K+ + +R
Sbjct: 1633 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSR 1673
Score = 41.6 bits (96), Expect = 0.001
Identities = 59/291 (20%), Positives = 110/291 (37%), Gaps = 16/291 (5%)
Query: 22 GHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPALLLLSHSLPAQ 81
G S+ G P + E P R A RG ++ + P S S P
Sbjct: 1639 GSSSKGRGPSPEGSSSTESSPEHPPK-SRTARRGSRSSPEPKTKSRTPPRRRSSRSSPEL 1697
Query: 82 RRSMQAT--VAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC--RSRPQN 137
R + + A S R PR R S + S+P +SR R++ +
Sbjct: 1698 TRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 1757
Query: 138 RGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKA 197
R G P+ RG + ++SR K ++ +G+ + RR+ R+ + ++ +
Sbjct: 1758 RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGG 1817
Query: 198 AAAKSRGGGGKKTAAAGGKKPRRR-----RGQKAAKSR-GGGDKKLERQKAALTGVKSRG 251
+ SR ++++ ++ R R +K ++SR K R +A+ +
Sbjct: 1818 SGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Query: 252 DKKPLRGGKKQRER-----GQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKP 297
+ PL ++ R R + ++SR + ++ A+ R R P
Sbjct: 1878 SRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTP 1928
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 13/140 (9%)
Query: 174 KKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGG 233
KK +K + RG R+ ++ ++ +K ++ K KK + K R+ R R
Sbjct: 188 KKKKKKKDRGRRSESSSPRRERKKSSKK------KKHRSESESKKRKHRSPTPKSKRKSK 241
Query: 234 DKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGR 293
DKK +R ++ KSR + ++SR AA + GR
Sbjct: 242 DKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSA-------AAKTHTTALAGR 294
Query: 294 GEKPQKAEAGQGQNRRNEVG 313
P G+G +E G
Sbjct: 295 SPSPASGRRGEGDAPFSEPG 314
Score = 37.7 bits (86), Expect = 0.016
Identities = 59/295 (20%), Positives = 101/295 (34%), Gaps = 32/295 (10%)
Query: 45 PALLQRPAGRG-PCAT--LRSHPITP-APALLLLSHSLPAQRRSMQATVAKAGSPGRGRL 100
P L +R G P AT L P+ P + A S P + + + SP +
Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQP 427
Query: 101 GKEPRRRESWTRSA-PRRCPYQDASRAGSRVCRSRPQNRGGGDKK-----PRRRGQKAAK 154
K R S S P P + S ++R R DK RR G+ +
Sbjct: 428 TKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSP 487
Query: 155 SRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSR-----GGGGKK 209
+ G+ R + G + R P+ R R+A G+ +SR G +
Sbjct: 488 ATAKRGRS-RSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSR 546
Query: 210 TAAAGGKKPRRRRGQKAAKS--------------RGGGDKKLERQKAALTGVKSRGDKKP 255
G+ RRG+ ++S RG + ++ + + +R +
Sbjct: 547 NTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS 606
Query: 256 LRGGKKQRERGQNTKSRGGGGEKP--QKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
++ R R + R P +++ + R GR A G+ ++R
Sbjct: 607 RTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSR 661
Score = 32.3 bits (72), Expect = 0.65
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 145 PRRRGQKAAKSRG--GGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKS 202
P+++ +K K RG PR ++ + KKHR +R + K ++ + K
Sbjct: 185 PKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKK 244
Query: 203 RGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAA 243
R T A K RR +A S D R ++A
Sbjct: 245 RKRSRSTTPA---PKSRRAHRSTSADSASSSDTSRSRSRSA 282
Score = 32.3 bits (72), Expect = 0.65
Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Query: 143 KKPRRRGQKAAKS-----RGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKA 197
KK + RG+++ S R KK + + + + +KHR P + +R + +K ++
Sbjct: 191 KKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRS 250
Query: 198 A--AAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKP 255
A KSR +A + R ++A ++ R + +G + GD
Sbjct: 251 TTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPF 310
Query: 256 LRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQG 305
G +R + ++ P + K + P + G
Sbjct: 311 SEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTG 360
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 55.8 bits (133), Expect = 6e-08
Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 30/248 (12%)
Query: 61 RSHPITPAPALLLLSHSLPAQRR-SMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCP 119
+ P T +P HS + S+ + + + SP R P+ R+ ++ +R
Sbjct: 240 KKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSR----LSPKHRDEGRKTGSQRS- 294
Query: 120 YQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKP 179
+GSR S + G G P+R G +S GG+ G + P
Sbjct: 295 ------SGSR---SPSPSGGSGWGSPQRNGGSGQRSGAHGGRP--GSAHSPPDKPSSPSP 343
Query: 180 RRRGERAAAA------GGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGG 233
R R + AAAA G + +A S+G GG+ AAGG RRRR ++ +SR
Sbjct: 344 RVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGR---AAGGAGRRRRRRRRRRRSRSSA 400
Query: 234 DKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGR 293
R + RG + L + + G RG G P+ + G G R
Sbjct: 401 SAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSG---SGRGAPGPGPEPGSERGHGGHGKR 457
Query: 294 G-EKPQKA 300
E+P +A
Sbjct: 458 AKERPPRA 465
Score = 49.3 bits (116), Expect = 5e-06
Identities = 64/253 (25%), Positives = 97/253 (38%), Gaps = 37/253 (14%)
Query: 50 RPAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQATVAKA-GSPGRGRLGKEPRRRE 108
+P+ P ++ P P P S Q +A G GR R + RRR
Sbjct: 337 KPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS 396
Query: 109 SWTRSAPRR--------CPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGG 160
+ SAPRR P + +SR+ SR S G G P G + RG GG
Sbjct: 397 RSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP---GPEPGSERGHGG 453
Query: 161 KKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGG--GKKTAAAGGKKP 218
G++A K R PR R + + G A R GG GK ++ + G P
Sbjct: 454 ---HGKRA------KERPPRARPASTSPSPG--------AHGRRGGPEGKSSSRSPGPHP 496
Query: 219 RRRRGQKA-AKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGE 277
R ++ +KSR +K + +S KKPL K R +++++
Sbjct: 497 RSWSSSRSPSKSRSRSAEKRPHSPS-----RSPSPKKPLSRDKDGEGRARHSEAEATRAR 551
Query: 278 KPQKAAAAGAKSR 290
+ ++ + K R
Sbjct: 552 RRSRSYSPIRKRR 564
Score = 36.6 bits (83), Expect = 0.035
Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 22/230 (9%)
Query: 101 GKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNR-----GGGDKKPRRRGQKAAKS 155
G R + W+ S+ P + + G RSR + R G P R+ +K+ K
Sbjct: 150 GHRGYRTKHWSSSSASPPPKKKKKKKGGHR-RSRKKRRLESECSCGSSSPLRKKKKSVKK 208
Query: 156 R-----GGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKT 210
G ++ R ++ + K+ K + + + G++ + ++ S
Sbjct: 209 HRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSH 268
Query: 211 AAAGGKKPR-----RRRGQKAAKSRGGGDKKLERQKAALTGVKSR----GDKKPLRGGKK 261
+ R R G+K R G + + G R G + GG+
Sbjct: 269 YSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRP 328
Query: 262 QRERGQNTKSRGGGGEKPQKAAAAGAK--SRGGRGEKPQKAEAGQGQNRR 309
K KAAAA +RG P+ A + QG+ R
Sbjct: 329 GSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGR 378
Score = 32.0 bits (71), Expect = 0.85
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 225 KAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQ---K 281
K K + GG ++ R+K L S G PLR KK ++ + +S G K + +
Sbjct: 169 KKKKKKKGGHRR-SRKKRRLESECSCGSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSR 227
Query: 282 AAAAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQHNLAL 320
++ K + ++P G+ ++ R+ G H+ +L
Sbjct: 228 SSKCKRKEKNKEKKRPHTESPGR-RSHRHSSGSSHSPSL 265
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 55.1 bits (131), Expect = 9e-08
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 128 SRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAA 187
S+ C R R KK RR +K + R K+ RG+K KK RK R RG+
Sbjct: 26 SKPCTQRESER----KKERREREKRKREREKERKRERGKKE-----KKKRKKRERGKERE 76
Query: 188 AAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGV 247
+K ++ + R +K K+ R++RG++ K KK ER++
Sbjct: 77 RK--RKEREKQRKERREKERRKRKKEKKKRERKQRGRRERK------KKKERKERERENK 128
Query: 248 KSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQN 307
+ R K+ R KK+R+ + K RG K +K + + R K +K E + +
Sbjct: 129 QRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER 188
Query: 308 RRNE 311
R +
Sbjct: 189 RERK 192
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/168 (21%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 105 RRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPR 164
R++E R +R ++ R + + + + R G ++ R+R ++ + + K+ R
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERR 95
Query: 165 GQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQ 224
+K KK R+ ++RG R ++ ++ K R +K +K +RR+ +
Sbjct: 96 KRKKE----KKKRERKQRGRRERKKKKERKERERENKQRRERKRKKR----RKKKRRKER 147
Query: 225 KAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSR 272
K K RG ++K +++K K ++K + ++++ER + K R
Sbjct: 148 KREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKER 195
Score = 45.8 bits (107), Expect = 6e-05
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 99 RLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGG 158
R +E R+RE R + R + R + R +K+ + R +K + R
Sbjct: 40 RREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKK 99
Query: 159 GGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKP 218
KK R +K G +K +K R+ ER ++ +K K R K+ G ++
Sbjct: 100 E-KKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRER 158
Query: 219 RRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKS 271
+R++ +K + + + ER+K + K+ + +K++ER ++ K+
Sbjct: 159 KRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKT 211
Score = 37.0 bits (84), Expect = 0.027
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 97 RGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSR 156
RG+ K+ R++ + R+ ++ R R R + + ++ ++RG++ K +
Sbjct: 58 RGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKK 117
Query: 157 GGGGKKPRGQKAAGAGAKKHR--KPRRRGERAAAAGG------KKLQKAAAAKSRGGGGK 208
++ R K +K R K RR+ + G KK +K K R K
Sbjct: 118 KERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRK 177
Query: 209 KTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQK 241
+ +K RR R ++ K R KK ER+K
Sbjct: 178 ERKKERERKERRERKKERKKER---RKKKERKK 207
Score = 33.9 bits (76), Expect = 0.22
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 177 RKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKK 236
R+ R+ ER K+ ++ + RG KK K+ +R RG++ + R K+
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKK------KRKKRERGKERERKR----KE 81
Query: 237 LERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEK 296
E+Q+ + R KK KK+RER Q + R +K +K K R R K
Sbjct: 82 REKQRKERREKERRKRKKE----KKKRERKQRGR-RERKKKKERKERERENKQRRERKRK 136
Query: 297 PQKAEAGQGQNRRNEVGGQ 315
++ + + + +R + G+
Sbjct: 137 KRRKKKRRKERKREKERGK 155
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 53.9 bits (128), Expect = 2e-07
Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 12/236 (5%)
Query: 34 AEGDADELLELPALLQRPAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQATV---- 89
AE D + L++ L PA P A R + +L QR A
Sbjct: 451 AESDGEGALQVD--LGEPAPAPPAADSRWGGLDLRRKILTQRRERYRQRSPSPAPAPAPA 508
Query: 90 AKAGSPGRGRLGKEPRR-----RESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGG-GDK 143
A AG P R + +E +R + + S + P AS S+ RSR + G
Sbjct: 509 AAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASS 568
Query: 144 KPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSR 203
RRR + ++SR + + G + + +RR R +A+ +++++
Sbjct: 569 SARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRE 628
Query: 204 GGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGG 259
GK G KK ++R + K G G +K +G S GD+ R G
Sbjct: 629 RHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDRDSRRRG 684
Score = 48.9 bits (115), Expect = 7e-06
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 105 RRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQ-KAAKSRGGGGKKP 163
+RRE + + +P P A + + P R ++ +R G+ K A S G +
Sbjct: 489 QRRERYRQRSPSPAP------APAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPA 542
Query: 164 RGQKAAGAGAKKHR-KPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRR 222
A+ +KKHR + R+ G A+++ ++ + + ++S + T RRR
Sbjct: 543 PPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRST-------DRRRG 595
Query: 223 GQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKA 282
G + ++SR +K+ R+++A + +++R RG++ GGG +K +K
Sbjct: 596 GSRRSRSR---EKRRRRRRSASPPPATSSSSS----SRRERHRGKHRD--GGGSKKKKKR 646
Query: 283 AAAGAKSRGGRGEKPQKAEA 302
+ + + R G G + A A
Sbjct: 647 SRSRGEKRSGDGSEKAPAPA 666
Score = 42.0 bits (97), Expect = 8e-04
Identities = 82/327 (25%), Positives = 118/327 (36%), Gaps = 59/327 (18%)
Query: 36 GDADELLELPALLQRPAGRGPCATLRSHPITPAPALL--LLSHSLPAQRRSMQA------ 87
GD E + PA P+G C S P + L H L A +R++
Sbjct: 656 GDGSE--KAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKS 713
Query: 88 -----TVAKAGSPGRGRL----GKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNR 138
+ A A SP R L G R + RR +S + SR SR +
Sbjct: 714 DPRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKAL 773
Query: 139 GGGDKKPRRRGQKAAKSRGGGGKKPRGQK-AAGAGAKKHRKPRRRGERAAAAGGK----- 192
GGD R R + + R KK R K +A + + P G ++++
Sbjct: 774 DGGD---RDRDRDRDRDRDRSSKKARPPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRK 830
Query: 193 -KLQKAAAAKSRGGGGKKT----AAAGGK------------------KPRRRRGQKAAKS 229
KLQ A R G T AA+ G KP R + AK+
Sbjct: 831 VKLQSKVAVLIREGVSSTTPAKDAASAGLGSIGVKFSRDRESRSPFLKPDERAPTEMAKA 890
Query: 230 RGGGDKKLERQKAALTGVK----SRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAA 285
G K + + A G K ++G KP + KK R G S G GG+ K + A
Sbjct: 891 APGSTKPKKTKVKAKAGAKKTKGTKGKTKPSKTRKKVRSGG---GSGGSGGQVSLKKSKA 947
Query: 286 GAKSRGGRGEKPQKAEAGQGQNRRNEV 312
+ S+ G K + + G+ R +V
Sbjct: 948 DSCSQAA-GTKGAEETSWSGEERAAKV 973
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 51.6 bits (122), Expect = 1e-06
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 44/182 (24%)
Query: 157 GGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGK 216
G GG++ +G AG A K ++P G +++ A A RGGG ++ A G +
Sbjct: 24 GWGGEEVQGLARAGLAAGKGQRP---------PGPGRVRAAQARARRGGGARERPAEGAR 74
Query: 217 KPRRRRGQKAAKSRGGGDKKLE--------------RQKAALTG----------VKSRGD 252
PR RG +R G D +L R++AA G +S G
Sbjct: 75 GPRAARG----GARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQ 130
Query: 253 KKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKP------QKAEAGQGQ 306
P Q R Q ++ GGG +P + A A + GG+ P +A AGQG
Sbjct: 131 PFPQLRSHWQAPR-QGWPAQEGGGRRPSRREEAAALAGGGKRTAPGLRGRGGRAAAGQGG 189
Query: 307 NR 308
+R
Sbjct: 190 DR 191
Score = 39.3 bits (90), Expect = 0.005
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 129 RVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQ-KAAGAGAKKHRKPRRRGERAA 187
R ++R + GG ++P + +RGG P Q +AA + + P+ R E AA
Sbjct: 53 RAAQARARRGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRRE-AA 111
Query: 188 AAGGKKLQKAAAAKSRGG--------------GGKKTAAAGGKKPRRRRGQKAAKSRGGG 233
AG +K + G G GG++P RR ++AA GGG
Sbjct: 112 CAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPRQGWPAQEGGGRRPSRR--EEAAALAGGG 169
Query: 234 DKKLERQKAALTGVKSRGDKKPL-RGGKKQRERGQNTKSR 272
K G++ RG + +GG + +R + +S+
Sbjct: 170 -------KRTAPGLRGRGGRAAAGQGGDRHPDRWRRQRSK 202
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 51.6 bits (122), Expect = 1e-06
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 143 KKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKH---RKPRRRGERAAAAGGKKLQKAAA 199
KK RR +K + R K+ RG+K KK RK RRR + K+ +K
Sbjct: 60 KKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKE 119
Query: 200 AKSRGGGGKKTAAAGGKKPRRRRGQK-AAKSRGGGDKKLERQKAALTGVKSRGDKKPLRG 258
K RG K+ K+ R+R +K + + +K+ ER++ K G+K+ R
Sbjct: 120 KKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERK 179
Query: 259 GKKQRERGQNTKSR-GGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQ 315
K+++ER + ++R E+ +K K R + E+ ++ + + N R + G+
Sbjct: 180 EKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGK 237
Score = 45.8 bits (107), Expect = 6e-05
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 103 EPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKK 162
E R+ R + R+ ++ + + R + RG +KK R+ ++ + KK
Sbjct: 46 ETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERER------KK 99
Query: 163 PRGQKAAGAGAKKH-RKPRRRGERAAAAG-GKKLQKAAAAKSRGGGGKKTAAAGGKKPRR 220
R +K G +K RK + + ER + GK+ ++ K ++ +K R
Sbjct: 100 RRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERE 159
Query: 221 RRGQKAAKSRGGGDKKLERQ----KAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGG 276
R+ +K + + G+K+ ER+ K ++R ++K R K++RER + K +
Sbjct: 160 RKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERK 219
Query: 277 EKPQKAAAAG--AKSRGGRGEKPQK 299
++ QK K RG R K +K
Sbjct: 220 KERQKDRQTNWREKERGKRERKERK 244
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 207 GKKTAAAGGKKPRRRRGQKAA-------KSRGGGDKKLERQKAALTGVKSRGDKKPLRGG 259
GKK + KK RR R ++ + RG +KK ER+K K R +K+ G
Sbjct: 51 GKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGE 110
Query: 260 KKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNE 311
+K++ + + K RG ++ ++ + R R E+ +K E + + R E
Sbjct: 111 EKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKE 162
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/136 (20%), Positives = 62/136 (45%)
Query: 174 KKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGG 233
KK R+ R+ ER K+ ++ + RG KK ++ R++R ++ G
Sbjct: 52 KKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEE 111
Query: 234 DKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGR 293
+K ++++ G S+ K+ R +++RE + + + EK ++ + R
Sbjct: 112 KEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQV 171
Query: 294 GEKPQKAEAGQGQNRR 309
GEK ++ + + + R+
Sbjct: 172 GEKEEERKEKERKERK 187
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 51.6 bits (122), Expect = 1e-06
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 26/233 (11%)
Query: 94 SPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAA 153
SP + G + R E+ AP ++ R + PQ R G +RRG +++
Sbjct: 56 SPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ-----PQRRPAGGTG-QRRGSRSS 109
Query: 154 KSRGGGGKKPRGQKAAGAGAK-------KHRKPRRRGERAAAAGGKKL----------QK 196
S G + R ++AA A A + RKP++ R AA G++ Q+
Sbjct: 110 SSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGSGCSPSADQQR 169
Query: 197 AAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGG-GDKKLERQKAALTGVKSRGDKKP 255
A + ++G + +R+R Q + GG G ++ R + G ++
Sbjct: 170 AQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSRQPAGGTGQRRG 229
Query: 256 LRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
R + Q + R +PQ+ A G R G P G GQ R
Sbjct: 230 SRSSPSADQ--QRAQDREEEAAQPQRRPAGGTGQRRGTAAAPVPTTGGTGQRR 280
Score = 33.5 bits (75), Expect = 0.29
Identities = 59/231 (25%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 103 EPRRRESWTRSAP-RRCPYQDASRAGSRVCRSRPQNR-----GGGDKKPRRRGQKAAKSR 156
+PR++E TR R D + RPQ + GG + RRG ++ S
Sbjct: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQ--RRGSGSSPSA 59
Query: 157 GGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGK 216
G + R ++AA A A P RG R ++ Q+ A GG G++
Sbjct: 60 DQQGAQDREEEAAAAPA-----PTSRGHRTEKRKPQQPQRRPA----GGTGQR------- 103
Query: 217 KPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRER-GQNTKSRGGG 275
R R +A +G D+ E + AA S G + R ++ + R T R G
Sbjct: 104 --RGSRSSSSADQQGAQDR--EEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGS 159
Query: 276 GEKP------------QKAAAAGAKSRGGRGEKPQKAE------AGQGQNR 308
G P + AA S G R EK ++ + G GQ R
Sbjct: 160 GCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRR 210
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 51.2 bits (121), Expect = 1e-06
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 51 PAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESW 110
P P + P++PAP L ++P G P G L +P+ +
Sbjct: 90 PPALSPAPASPARPVSPAPGRRLSLWAVPP------------GPPLSGGLSPDPKPGGAP 137
Query: 111 TRS------APRRCPYQDASRAGSRVCRSRPQNRGGGDKK----PRRRGQKAAKSRGGGG 160
T S +P + RAG + S + G G ++ P K K+ G
Sbjct: 138 TSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSG 197
Query: 161 KKPRGQKAAGAGA---KKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGG 215
K G K AG+ + KPR +G +++A G + AA A + GGGG + +GG
Sbjct: 198 AKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGG 255
Score = 28.5 bits (62), Expect = 9.4
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 21/71 (29%)
Query: 126 AGSRVCRSRPQNRGGGDKKPRRRGQKA-------------AKSRGGGGK--KPRGQKAAG 170
AGSR+ S P++ G KPR +G K+ A + GGGG G AG
Sbjct: 206 AGSRL--SWPESEG----KPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAG 259
Query: 171 AGAKKHRKPRR 181
AGA+ PR+
Sbjct: 260 AGARGKLSPRK 270
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 50.8 bits (120), Expect = 2e-06
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%)
Query: 145 PRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRG 204
P ++A +++G G KKP K K +K +R + K A+ +G
Sbjct: 142 PATAPRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGAATEKARKQG 201
Query: 205 GGGKKTAAAGGKK----PRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGK 260
G K T A G+ P+ + +A S GG L R+ A S+GD + R K
Sbjct: 202 GAAKDTRAQSGEARKVPPKPDKAMRAPSSAGG----LSRKAKAKGSRSSQGDAEAYRKTK 257
Query: 261 KQRERGQNTKSR--GGGGEKPQKAAAAGAKS-RGGRGEKPQKAEAGQGQNRR 309
+ + + T S+ G +K A AK+ + G+G + A +G +
Sbjct: 258 AESKSSKPTASKVKNGAASPTKKKVVAKAKAPKAGQGPNTKAAAPAKGSGSK 309
Score = 38.1 bits (87), Expect = 0.012
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 29/241 (12%)
Query: 40 ELLELPALLQRPAGRGPCATLRSHPITPAPALLLLSHSL-PAQRRSMQAT-VAKAGSPGR 97
++L LL++ G L + P+ S L P ++ +Q +A A +P R
Sbjct: 89 DVLRFKYLLKQALATGMRRGLLARPLNSKARGATGSFKLVPKHKKKIQPRKMAPATAPRR 148
Query: 98 G--RLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQ---------NRGGGDKKPR 146
GK P++ P + A++ ++V + P+ +GG K R
Sbjct: 149 AGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGAATEKARKQGGAAKDTR 208
Query: 147 RRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQ------KAAAA 200
+ +A K K R +AG ++K + R + A +K + K A+
Sbjct: 209 AQSGEARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTAS 268
Query: 201 KSRGGGG---KKTAAAGGKKPRRRRG---QKAAKSRGGGDK----KLERQKAALTGVKSR 250
K + G KK A K P+ +G + AA ++G G K L R+ A G +
Sbjct: 269 KVKNGAASPTKKKVVAKAKAPKAGQGPNTKAAAPAKGSGSKVVPAHLSRKTEAPKGPRKA 328
Query: 251 G 251
G
Sbjct: 329 G 329
Score = 31.2 bits (69), Expect = 1.5
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 97 RGRLGKEPRRRESWTRSAPRRCP--YQDASRAG--SRVCRSRPQNRGGGDKKPRRRGQKA 152
+G K+ R + R P + + S AG SR +++ GD + R+ +
Sbjct: 200 QGGAAKDTRAQSGEARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAE 259
Query: 153 AKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAA 212
+KS KP K A +K +A AG KAAA +G G K A
Sbjct: 260 SKS-----SKPTASKVKNGAASPTKKKVVAKAKAPKAGQGPNTKAAAPA-KGSGSKVVPA 313
Query: 213 AGGKKPRRRRG-QKAAKSRGGGDKKLERQKA 242
+K +G +KA K+ Q+A
Sbjct: 314 HLSRKTEAPKGPRKAGLPIKASSSKVSSQRA 344
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 50.1 bits (118), Expect = 3e-06
Identities = 69/263 (26%), Positives = 90/263 (34%), Gaps = 26/263 (9%)
Query: 54 RGPCATLRSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRS 113
+G CA L P P P L QR + G G P+ + +
Sbjct: 144 KGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQE 203
Query: 114 APRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGA 173
P + +RV P G ++PR R + A R A G GA
Sbjct: 204 TAAPAPQPGPTAPPARV--REPGRAEGASREPRLRSRAA-----------RPPPAPGPGA 250
Query: 174 KKHRKPRRRGERAAAAGGKKLQKAAAAKS-RGGGGKKTAAAGGKKPRRRRGQKAAKSRGG 232
R R R G +KAAA ++ GGGG+ A G P R Q A G
Sbjct: 251 LS-RASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGC 309
Query: 233 GDKKLERQKAALTGVKSRGDKKPLRGGKKQRER-GQNTKSRGGGGEKPQKAAAAGAKSRG 291
L R G + P G +R R + + RGGGGE A G S
Sbjct: 310 ATVGLRRGDCDRAG----SSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPP 365
Query: 292 GR------GEKPQKAEAGQGQNR 308
GR G +A +G+G R
Sbjct: 366 GRRHDEEVGAAVLRAGSGEGSRR 388
Score = 45.8 bits (107), Expect = 6e-05
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 32/234 (13%)
Query: 79 PAQRRSMQATVAKAGSPGRGR-LGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQN 137
PA + A A+ PGR +EPR R R P P A SR RSR
Sbjct: 207 PAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGP-----GALSRASRSRAAG 261
Query: 138 RGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPR-------------RRGE 184
R G G+KAA R GG R A G A R + RRG+
Sbjct: 262 RPGPGF---HGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGD 318
Query: 185 ---------RAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDK 235
A + G++ + + RGGGG+ P G++ + G
Sbjct: 319 CDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVL 378
Query: 236 KLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK-PQKAAAAGAK 288
+ + + G++ + + G ++ G+N KS + P+++ A+G K
Sbjct: 379 RAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 432
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 50.1 bits (118), Expect = 3e-06
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 44/182 (24%)
Query: 157 GGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGK 216
G GG++ +G AG K ++P G +++ A A RGGG ++ A G +
Sbjct: 24 GWGGEEVQGLARAGLATGKGQRP---------PGPGRVRAAQARARRGGGARERPAEGAR 74
Query: 217 KPRRRRGQKAAKSRGGGDKKLE--------------RQKAALTG----------VKSRGD 252
PR RG +R G D +L R++AA G +S G
Sbjct: 75 GPRAARG----GARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQ 130
Query: 253 KKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKP------QKAEAGQGQ 306
P Q R Q ++ GGG +P + A A + GG+ P +A AGQG
Sbjct: 131 PFPQLRSHWQAPR-QGWPAQEGGGRRPSRREEAAALAGGGKRTAPGRRGRGGRAAAGQGG 189
Query: 307 NR 308
+R
Sbjct: 190 DR 191
Score = 38.1 bits (87), Expect = 0.012
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 43/142 (30%)
Query: 129 RVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQ------------------KAAG 170
R ++R + GG ++P + +RGG P Q +AA
Sbjct: 53 RAAQARARRGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAAC 112
Query: 171 AGA--------------------KKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKT 210
AG+ + H + R+G A GG++ + A + GGGK+T
Sbjct: 113 AGSFFFRKCRQSPRSHGQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALAGGGKRT 172
Query: 211 AAAGGKKPRRRRGQKAAKSRGG 232
A RR RG +AA +GG
Sbjct: 173 APG-----RRGRGGRAAAGQGG 189
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 50.1 bits (118), Expect = 3e-06
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 102 KEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGK 161
K RR S +RS+ R + +S + SR RSR ++R + R R +SR G K
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSR-SRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255
Query: 162 KPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRR 221
+++ + PR+R ++++ ++ +K + ++S G +K + P RR
Sbjct: 256 ----SRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERR 311
Query: 222 RGQKAAKSRGG 232
+ S G
Sbjct: 312 HRSSSGSSHSG 322
Score = 38.5 bits (88), Expect = 0.009
Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 22/149 (14%)
Query: 124 SRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRG 183
SR+ SR SR +R R R + ++S + R
Sbjct: 202 SRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR--------------- 246
Query: 184 ERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAA 243
ER+ + G K + + + K++ ++ P R R + ++S GD+K R
Sbjct: 247 ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRR---- 302
Query: 244 LTGVKSRGDKKPLRGGKKQRERGQNTKSR 272
+SR ++ R G + S+
Sbjct: 303 ---TRSRSPERRHRSSSGSSHSGSRSSSK 328
Score = 37.0 bits (84), Expect = 0.027
Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 192 KKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGG-----DKKLERQKAALTG 246
KK + + +KSR + ++ + P R + ++SR + R+++ G
Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSS--PSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRG 253
Query: 247 VKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQ 306
KSR + RG R+R ++ S E+ +K + + + S G R ++ ++ + + +
Sbjct: 254 SKSRSSSRSHRGSSSPRKRSYSSSS--SSPERNRKRSRSRSSSSGDRKKRRTRSRSPE-R 310
Query: 307 NRRNEVGGQHN 317
R+ G H+
Sbjct: 311 RHRSSSGSSHS 321
Score = 31.2 bits (69), Expect = 1.5
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 143 KKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKS 202
KK RR + ++S R + + + + R R R++++ + + ++ +S
Sbjct: 196 KKSNRRSRSKSRS-----SHSRSSSRSSSPSSSRSRSRSRS-RSSSSSQSRSRSSSRERS 249
Query: 203 RGGGGKKTAAA---GGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGG 259
R G K +++ G R+R ++ S ++K R +++ S GD+K R
Sbjct: 250 RSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSS-----SSGDRKKRRTR 304
Query: 260 KKQRERGQNTKS 271
+ ER + S
Sbjct: 305 SRSPERRHRSSS 316
Score = 30.0 bits (66), Expect = 3.2
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 80 AQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRS-----APRRCPYQDASRAGSRVC-RS 133
++ RS ++ +++ S R R + S +RS +PR+ Y +S + R RS
Sbjct: 229 SRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRS 288
Query: 134 RPQNRGGGDKKPRRRGQKA--AKSRGGGGKKPRGQKAA 169
R ++ GD+K RR ++ + R G G +++
Sbjct: 289 RSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSS 326
Score = 28.9 bits (63), Expect = 7.2
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 77 SLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQ 136
S P+ RS + +++ S + R R S RS R SR+ SR R
Sbjct: 218 SSPSSSRSRSRSRSRSSSSSQSR-----SRSSSRERSRSR----GSKSRSSSRSHR---- 264
Query: 137 NRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRR 182
G PR+R ++ S +K +++ +G +K R+ R R
Sbjct: 265 ----GSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSR 306
>gi|239753399 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 48.5 bits (114), Expect = 9e-06
Identities = 49/150 (32%), Positives = 63/150 (42%), Gaps = 27/150 (18%)
Query: 111 TRSAPRRCPYQDASRAGSRV-----CRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRG 165
TR PR PY + GSR+ C S P G G + + RGGG +
Sbjct: 4 TRQHPRH-PYP---KVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHH 59
Query: 166 QK---------AAGAGAKKHRKPR--RRGERAAAAGGKKLQKAAAAKSRG---GGGKKTA 211
+ A GA A RKPR R G A AA +K ++ A A+ RG GGG +
Sbjct: 60 AENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARAD 119
Query: 212 AAGGKKPRRRRGQKA----AKSRGGGDKKL 237
G+ PRRR +A S G KK+
Sbjct: 120 GLRGRSPRRRPAGRAHARSLPSAPGSPKKI 149
>gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo
sapiens]
Length = 165
Score = 48.5 bits (114), Expect = 9e-06
Identities = 49/150 (32%), Positives = 63/150 (42%), Gaps = 27/150 (18%)
Query: 111 TRSAPRRCPYQDASRAGSRV-----CRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRG 165
TR PR PY + GSR+ C S P G G + + RGGG +
Sbjct: 4 TRQHPRH-PYP---KVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHH 59
Query: 166 QK---------AAGAGAKKHRKPR--RRGERAAAAGGKKLQKAAAAKSRG---GGGKKTA 211
+ A GA A RKPR R G A AA +K ++ A A+ RG GGG +
Sbjct: 60 AENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARAD 119
Query: 212 AAGGKKPRRRRGQKA----AKSRGGGDKKL 237
G+ PRRR +A S G KK+
Sbjct: 120 GLRGRSPRRRPAGRAHARSLPSAPGSPKKI 149
>gi|4885381 histone cluster 1, H1b [Homo sapiens]
Length = 226
Score = 48.5 bits (114), Expect = 9e-06
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 8/200 (4%)
Query: 49 QRPAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQ-ATVAKAGSPGRGRLGKEPRRR 107
++ AG G + P P L+ + + +R + A + KA + G + K R
Sbjct: 26 KKAAGAGAAKRKATGP--PVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRI 83
Query: 108 ESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQK 167
+ +S + G+ + G+ KP+ + AAK++ G P+ K
Sbjct: 84 KLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAK 143
Query: 168 AAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR----RRRG 223
A K +K ++ ++ AAAG KK+ K + K++ K A KP+ +
Sbjct: 144 KAAGAKKAVKKTPKKAKKPAAAGVKKVAK-SPKKAKAAAKPKKATKSPAKPKAVKPKAAK 202
Query: 224 QKAAKSRGGGDKKLERQKAA 243
KAAK + K + +KAA
Sbjct: 203 PKAAKPKAAKPKAAKAKKAA 222
Score = 38.9 bits (89), Expect = 0.007
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 161 KKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRR 220
KK +KAAGAGA K + A +L A A S+ G AA
Sbjct: 21 KKKATKKAAGAGAAKRK--------ATGPPVSELITKAVAASKERNGLSLAAL------- 65
Query: 221 RRGQKAAKSRGGGD--KKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK 278
K A + GG D K R K L + S+G +G N K+ G K
Sbjct: 66 ----KKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEA-K 120
Query: 279 PQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
P+ A AK++ G P+KA+ G +
Sbjct: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKK 150
Score = 32.3 bits (72), Expect = 0.65
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 138 RGGGDKKPRRRGQKAAKSRGGGG-----KKPRGQKAAGAGAKKHRKPRRRGERAAAAGGK 192
+ G KK ++ K AK G K P+ KAA K + P + A
Sbjct: 144 KAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKP 203
Query: 193 KLQKAAAAKSRGGGGKKTAA 212
K K AAK + KK AA
Sbjct: 204 KAAKPKAAKPKAAKAKKAAA 223
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 48.5 bits (114), Expect = 9e-06
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 133 SRPQNRGGGDKKPRR---RGQKAAKSR----------GGGGKKPRGQKAAGAGAK---KH 176
+R + R GG +K RR GQ+A K R GGGG ++G G ++
Sbjct: 93 ARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGG------ASSGGGVTPLVEY 146
Query: 177 RKPRRRGERAAAAGGKKLQKAA-AAKSRGGGGKKTAAAGGKKPR----RRRGQKAAKSRG 231
+ E+ GG AA AA GG G A++ G + R RR ++ +S
Sbjct: 147 EDVSSQSEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSS 206
Query: 232 GGDKKLERQKAALTGVK-----SRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAG 286
G K+ R+ G + S+ + G+++ E ++ S GG + K+A+A
Sbjct: 207 GRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRR--KSASAT 264
Query: 287 AKSRGGRGEKPQKAEAGQGQNRR 309
+ S R ++ KA + ++ +
Sbjct: 265 SSSSSSRKDRDSKAHRSRTKSSK 287
Score = 44.3 bits (103), Expect = 2e-04
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 31/196 (15%)
Query: 127 GSRVCRSRPQNRGGGDKKPRRRGQKAA----KSRGGGGKKPRGQKAAGAGAKKHRKPRRR 182
GS S Q RG G ++ RR ++++ K R ++ GQ+ +K +
Sbjct: 179 GSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHS 238
Query: 183 GERAAAAGGKKLQKAAAAKSRGGGGKK-TAAAGGKKPRRRRGQKAAKSRGGGDK------ 235
GE A ++ K+ ++ S GG K +A + R+ R KA +SR K
Sbjct: 239 GEERA-----EVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAY 293
Query: 236 --------------KLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQK 281
K R++ +L+ + R D P+ Q R + + S GGG P
Sbjct: 294 KEPPKAYREDKTEPKAYRRRRSLSPLGGR-DDSPVSHRASQSLRSRKSPSPAGGGSSPYS 352
Query: 282 AAAAGAKSRGGRGEKP 297
+ S R P
Sbjct: 353 RRLPRSPSPYSRRRSP 368
Score = 38.1 bits (87), Expect = 0.012
Identities = 61/294 (20%), Positives = 94/294 (31%), Gaps = 55/294 (18%)
Query: 64 PITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDA 123
P P P L L + A + A + SPG E +R R A R +
Sbjct: 52 PPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPL---EVKRLARGKRRAGGRQKRRRG 108
Query: 124 SRAGSRVCRSR------PQNRGGGDKKP---------------------------RRRGQ 150
RAG + R PQ GGG
Sbjct: 109 PRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAA 168
Query: 151 KAAKSRGGGGKKP---RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGG 207
AA GG G P G + G G++ R+PRR +R +++G K + + G G
Sbjct: 169 TAAGGTGGSGGSPASSSGTQRRGEGSE--RRPRR--DRRSSSGRSKERHREHRRRDGQRG 224
Query: 208 KKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ 267
A+ + ++A ++ G ++ + + S + R K R R +
Sbjct: 225 GSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTK 284
Query: 268 NTKSRGGGGEKPQKA------------AAAGAKSRGGRGEKPQKAEAGQGQNRR 309
++K ++P KA GGR + P A Q R
Sbjct: 285 SSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSR 338
Score = 35.0 bits (79), Expect = 0.10
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 30/153 (19%)
Query: 164 RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRG 223
RG++ AG R+ RRRG RA K+ + + GGG
Sbjct: 94 RGKRRAGG-----RQKRRRGPRAGQEAEKRRVFSLPQPQQDGGG---------------- 132
Query: 224 QKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAA 283
A S GG +E + V S+ ++ L GG GG G P A+
Sbjct: 133 --GASSGGGVTPLVEYE-----DVSSQSEQGLLLGGASAATAATAAGGTGGSGGSP--AS 183
Query: 284 AAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQH 316
++G + RG E+ + + R E +H
Sbjct: 184 SSGTQRRGEGSERRPRRDRRSSSGRSKERHREH 216
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 48.5 bits (114), Expect = 9e-06
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 133 SRPQNRGGGDKKPRR---RGQKAAKSR----------GGGGKKPRGQKAAGAGAK---KH 176
+R + R GG +K RR GQ+A K R GGGG ++G G ++
Sbjct: 93 ARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGG------ASSGGGVTPLVEY 146
Query: 177 RKPRRRGERAAAAGGKKLQKAA-AAKSRGGGGKKTAAAGGKKPR----RRRGQKAAKSRG 231
+ E+ GG AA AA GG G A++ G + R RR ++ +S
Sbjct: 147 EDVSSQSEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSS 206
Query: 232 GGDKKLERQKAALTGVK-----SRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAG 286
G K+ R+ G + S+ + G+++ E ++ S GG + K+A+A
Sbjct: 207 GRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRR--KSASAT 264
Query: 287 AKSRGGRGEKPQKAEAGQGQNRR 309
+ S R ++ KA + ++ +
Sbjct: 265 SSSSSSRKDRDSKAHRSRTKSSK 287
Score = 44.3 bits (103), Expect = 2e-04
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 31/196 (15%)
Query: 127 GSRVCRSRPQNRGGGDKKPRRRGQKAA----KSRGGGGKKPRGQKAAGAGAKKHRKPRRR 182
GS S Q RG G ++ RR ++++ K R ++ GQ+ +K +
Sbjct: 179 GSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHS 238
Query: 183 GERAAAAGGKKLQKAAAAKSRGGGGKK-TAAAGGKKPRRRRGQKAAKSRGGGDK------ 235
GE A ++ K+ ++ S GG K +A + R+ R KA +SR K
Sbjct: 239 GEERA-----EVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAY 293
Query: 236 --------------KLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQK 281
K R++ +L+ + R D P+ Q R + + S GGG P
Sbjct: 294 KEPPKAYREDKTEPKAYRRRRSLSPLGGR-DDSPVSHRASQSLRSRKSPSPAGGGSSPYS 352
Query: 282 AAAAGAKSRGGRGEKP 297
+ S R P
Sbjct: 353 RRLPRSPSPYSRRRSP 368
Score = 38.1 bits (87), Expect = 0.012
Identities = 61/294 (20%), Positives = 94/294 (31%), Gaps = 55/294 (18%)
Query: 64 PITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDA 123
P P P L L + A + A + SPG E +R R A R +
Sbjct: 52 PPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPL---EVKRLARGKRRAGGRQKRRRG 108
Query: 124 SRAGSRVCRSR------PQNRGGGDKKP---------------------------RRRGQ 150
RAG + R PQ GGG
Sbjct: 109 PRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAA 168
Query: 151 KAAKSRGGGGKKP---RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGG 207
AA GG G P G + G G++ R+PRR +R +++G K + + G G
Sbjct: 169 TAAGGTGGSGGSPASSSGTQRRGEGSE--RRPRR--DRRSSSGRSKERHREHRRRDGQRG 224
Query: 208 KKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ 267
A+ + ++A ++ G ++ + + S + R K R R +
Sbjct: 225 GSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTK 284
Query: 268 NTKSRGGGGEKPQKA------------AAAGAKSRGGRGEKPQKAEAGQGQNRR 309
++K ++P KA GGR + P A Q R
Sbjct: 285 SSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSR 338
Score = 35.0 bits (79), Expect = 0.10
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 30/153 (19%)
Query: 164 RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRG 223
RG++ AG R+ RRRG RA K+ + + GGG
Sbjct: 94 RGKRRAGG-----RQKRRRGPRAGQEAEKRRVFSLPQPQQDGGG---------------- 132
Query: 224 QKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAA 283
A S GG +E + V S+ ++ L GG GG G P A+
Sbjct: 133 --GASSGGGVTPLVEYE-----DVSSQSEQGLLLGGASAATAATAAGGTGGSGGSP--AS 183
Query: 284 AAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQH 316
++G + RG E+ + + R E +H
Sbjct: 184 SSGTQRRGEGSERRPRRDRRSSSGRSKERHREH 216
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 48.1 bits (113), Expect = 1e-05
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 36/256 (14%)
Query: 81 QRRSMQATVAKAGS---PGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQN 137
QRR T + GS P + G + R E+ AP ++ R + PQ
Sbjct: 164 QRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ-----PQC 218
Query: 138 RGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKA 197
R G +RRG +++ S + R ++AA A A P RG R ++ Q+
Sbjct: 219 RPAGGTG-QRRGSRSSPSADQQRAQDREEEAAAAPA-----PTSRGHRTEKRKPQQPQRR 272
Query: 198 AAA---KSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAAL---------- 244
A + RG G +A G + R A G + +R++ L
Sbjct: 273 PAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQ 332
Query: 245 ---TGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK-----PQKAAAAGAKSRGGRGEK 296
+G S +++ + +++ S G EK PQ+ AAG R G G
Sbjct: 333 RRGSGCSSSANQQGAQDREEEAAAAPVPTSSGHRTEKRKPQQPQRRPAAGTGQRRGSGSS 392
Query: 297 PQKAEAGQGQNRRNEV 312
P A+ + Q+R EV
Sbjct: 393 P-SADQQRAQDREEEV 407
Score = 47.0 bits (110), Expect = 3e-05
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 26/234 (11%)
Query: 94 SPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAA 153
SP + G + R E+ +AP + R P + G +K R+R Q
Sbjct: 56 SPSADQQGAQDREEEA--AAAPAADQQRAQDREEEAAAAPVPTSSGHRTEK-RKRLQLQC 112
Query: 154 KSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAA 213
+ GG G++ RG +++ + ++ + R E AAA + + R + A
Sbjct: 113 QPAGGTGQR-RGSRSSPSADQQRAQDR---EEEAAAAPVPTSRGHRTEKRKRQQPQRRPA 168
Query: 214 GGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLR----------GGKKQR 263
GG RR G + + G + E + AA SRG + R GG QR
Sbjct: 169 GGTGQRRGSGSSPSADQQGAQDR-EEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQR 227
Query: 264 ERGQNTKS--RGGGGEKPQKAAAAGA-KSRGGRGEK-----PQKAEAGQGQNRR 309
+++ S + ++ ++AAAA A SRG R EK PQ+ AG RR
Sbjct: 228 RGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRR 281
Score = 46.6 bits (109), Expect = 3e-05
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 144 KPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSR 203
KP R Q+ GG + RG ++ + ++ + R E AAAA Q+A +
Sbjct: 31 KPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDRE--EEAAAAPAADQQRAQDREEE 88
Query: 204 GGGGKKTAAAGGKKPRRRRGQKAAKSRGG-GDKKLERQKAALTGVKSRGDKKPLRGGKKQ 262
++G + +R+R Q + GG G ++ R + +++ ++
Sbjct: 89 AAAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVP 148
Query: 263 RERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNE 311
RG T+ R ++PQ+ A G R G G P + G Q+R E
Sbjct: 149 TSRGHRTEKR--KRQQPQRRPAGGTGQRRGSGSSPSADQQG-AQDREEE 194
Score = 45.1 bits (105), Expect = 1e-04
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 18/221 (8%)
Query: 103 EPRRRESWTRSAP-RRCPYQDASRAGSRVCRSRPQNR-----GGGDKKPRRRGQKAAKSR 156
+PR++E TR R D + RPQ + GG + RRG ++ S
Sbjct: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQ--RRGSGSSPSA 59
Query: 157 GGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAA-----GGKKLQKAAAAKSR----GGGG 207
G + R ++AA A A ++ + R E AAAA G + +K + + GG G
Sbjct: 60 DQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQLQCQPAGGTG 119
Query: 208 KKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQ 267
++ + ++R Q + R + + ++P GG QR
Sbjct: 120 QRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRPA-GGTGQRRGSG 178
Query: 268 NTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
++ S G + ++ AA A + RG + +K + Q Q R
Sbjct: 179 SSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCR 219
Score = 33.9 bits (76), Expect = 0.22
Identities = 62/260 (23%), Positives = 94/260 (36%), Gaps = 47/260 (18%)
Query: 28 AQPVQAAEGDADELLELPALLQRPAG-----RG----PCATL-----RSHPITPAPALLL 73
A PV + G E + +RPAG RG P A R APA
Sbjct: 144 AAPVPTSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTS 203
Query: 74 LSHSLPAQRRSMQATVAKAGSPGRGRLGK------EPRRRESWTRSAPRRCPYQDASRAG 127
H +R+ Q AG G+ R + + R ++ +A P R
Sbjct: 204 RGHRTE-KRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTE 262
Query: 128 SRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKK---HRKPRR--- 181
R + +PQ R G +RRG + S G + R ++AA A A HR +R
Sbjct: 263 KRKPQ-QPQRRPAGGTG-QRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRL 320
Query: 182 -------------RGERAAAAGGK-----KLQKAAAAKSRGGGGKKTAAAGGKKPRRRRG 223
RG +++ + + ++AAAA G +T ++P+RR
Sbjct: 321 QLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVPTSSGHRTEKRKPQQPQRRPA 380
Query: 224 QKAAKSRGGGDKKLERQKAA 243
+ RG G Q+ A
Sbjct: 381 AGTGQRRGSGSSPSADQQRA 400
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 48.1 bits (113), Expect = 1e-05
Identities = 67/233 (28%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 91 KAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRG- 149
KAG+ R ++ + R R AP P G + +R + RG + R RG
Sbjct: 10 KAGNEERDQVLADARPRRCCVVEAPGPMP------RGWILPGARSEERGARLAESRGRGV 63
Query: 150 -QKAAKSR--GGGGKKPRGQ-----KAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAK 201
+A+ SR GG G + G G +HR R GE AGG +
Sbjct: 64 TPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRG--REGEEGVRAGGGGTGEVRGGG 121
Query: 202 SRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKK 261
S G AA G+ G+ A RG G +ER+ A G + G + LR +
Sbjct: 122 SPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPG---VERRVA--EGAQQFGPRVGLRQHAE 176
Query: 262 QRERGQN-TKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNEVG 313
+ ER Q + RGGGG GG G + + GQGQ R VG
Sbjct: 177 RVERAQRAAEGRGGGG-------------GGGCGAQAHRRVVGQGQVRWEGVG 216
Score = 36.2 bits (82), Expect = 0.045
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 138 RGGGDKKPRRRGQKAAKSRGGGGKKPRG-QKAAGAGAKK------HRKPRRRGERAAAAG 190
RGGG + G+ A G G RG Q G G ++ + R G R A
Sbjct: 118 RGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAER 177
Query: 191 GKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKA 242
++ Q+AA + GGGG G + RR GQ + G G R+ A
Sbjct: 178 VERAQRAAEGRGGGGGG----GCGAQAHRRVVGQGQVRWEGVGQAARGRRMA 225
Score = 33.9 bits (76), Expect = 0.22
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 89 VAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQ--NRGGGDKKPR 146
V GSPGR +G+ E+ +A R RV Q R G +
Sbjct: 117 VRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAE 176
Query: 147 R--RGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGE 184
R R Q+AA+ RGGGG G GA+ HR+ +G+
Sbjct: 177 RVERAQRAAEGRGGGG-------GGGCGAQAHRRVVGQGQ 209
Score = 29.6 bits (65), Expect = 4.2
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 31/158 (19%)
Query: 160 GKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR 219
G PRG GA +++ RG R A + G+ + A+ + GG ++ G P
Sbjct: 35 GPMPRGWILPGARSEE------RGARLAESRGRGVTPRASWSRQPAGGP-LSSEGHLLP- 86
Query: 220 RRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGG--GE 277
R GG R + GV++ G G + RGGG G
Sbjct: 87 -------LVQRDGGGLAEHRGREGEEGVRAGG--------------GGTGEVRGGGSPGR 125
Query: 278 KPQKAAAAGAKSRGGRGEKPQKAEAGQGQNRRNEVGGQ 315
+P AA ++ G + ++ G G RR G Q
Sbjct: 126 QPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQ 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,671,796
Number of Sequences: 37866
Number of extensions: 905755
Number of successful extensions: 10079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 857
Number of HSP's that attempted gapping in prelim test: 5848
Number of HSP's gapped (non-prelim): 3010
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.